View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21117_low_6 (Length: 271)
Name: NF21117_low_6
Description: NF21117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21117_low_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 37806209 - 37806466
Alignment:
| Q |
14 |
aaatgaattaggataaggtgaaatgttgtgatagtcataannnnnnngtgatggagtttcattctctaaatcttgaagaacatagcttaaactaatacca |
113 |
Q |
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| T |
37806209 |
aaatgaattaggataaggtgaaatgttgtgatagtcataatttttttgtgatggagtttcattctctaaatcttgaagaacatagcttaaactaatacca |
37806308 |
T |
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| Q |
114 |
aaaggatcacctgaggtgtacactccactgttgcatagaacttggatgatgtttgtatttggaacactctcagctgaactccatagacacaacaaaataa |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37806309 |
aaaggatcacctgaggtgtacactccactgttgcatagaacttggatgatgtttgtatttggaacactctcagctgaactccatagacacaacaaaataa |
37806408 |
T |
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| Q |
214 |
tcacaattgttacatgttttggaggattgtccatattcctatgatgtttgattgaatt |
271 |
Q |
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| T |
37806409 |
tcacaattgttacatgttttggaggattgtccatattcctatgatgtttgattgaatt |
37806466 |
T |
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