View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21117_low_9 (Length: 226)
Name: NF21117_low_9
Description: NF21117
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21117_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 22 - 216
Target Start/End: Original strand, 7184781 - 7184975
Alignment:
| Q |
22 |
aaaccccccaagcagagtttgattacttcaataaggccaagattgtggcccctagtcaggttttgcctaacatcaaagaggtgttgcgccatgttttgtt |
121 |
Q |
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| T |
7184781 |
aaacctcccaagcagagtttgattacttcaataaggccaagattgtggcccctagtcaggttttgcctaacatcaaagaggtgttgcgccatgttttgtt |
7184880 |
T |
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| Q |
122 |
agagacttgttcgccatcaccttggaagtgaagaaatggtgaacctacttactaatttgtaagttcattatacacactgatcaacacaggttctg |
216 |
Q |
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| T |
7184881 |
agagacttgttcgccatcaccttggaagtgaagaaatggtgaacctgcttactaattcgtaagttcattatacaaactgatcaacacagtttctg |
7184975 |
T |
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