View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21118_high_4 (Length: 236)
Name: NF21118_high_4
Description: NF21118
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21118_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22881969 - 22881770
Alignment:
| Q |
1 |
aaataaatgatgaaaaacagccggaagaaaataattggttcgatagttgtagaaccattgtggtaaccatgattccaaatcaaaacagttccaaaaccat |
100 |
Q |
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| T |
22881969 |
aaataaatgatgaaaaacagccggaagaaaataattggttagataattgtacaaccattgtggtaaccatgattccaaatcaaaacagttccaaaaccat |
22881870 |
T |
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| Q |
101 |
gtataaagtgttgctacctaaaaatttgaannnnnnngttgcagataaatgaacttggagataaatacatgtcaatggtgcattgaggataatggaactg |
200 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
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| T |
22881869 |
gtataaagtgttgctacctaaaaatttgaaattttttgttgcagataaatgaacttggagataaatacatgtcaatggtgccttgaggataatgaaactg |
22881770 |
T |
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