View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21119_high_21 (Length: 319)
Name: NF21119_high_21
Description: NF21119
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21119_high_21 |
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Alignment Details
Target: chr4 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 10 - 298
Target Start/End: Original strand, 9963362 - 9963650
Alignment:
| Q |
10 |
agcagagttttaatcctatgaagcacaatatacatttcttcaagacaaagaacataagaattttgacgagttgaattcgaagatgaaactgaattacgaa |
109 |
Q |
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| T |
9963362 |
agcagagttttaaccctatgaagcacaatatacatttcttcaagacaaagaacataagaattttgacgagttgaattcgaagatgaaactgaattgcgaa |
9963461 |
T |
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| Q |
110 |
ttaggtcatcgaaaacgacaccgaggaggtgcgctttacgtatagtggaagaagaaattttgtttaaaaggaaacgacaccatggagctgcgtttaagga |
209 |
Q |
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| T |
9963462 |
ttaggtcatcgaaaacgacaccgagaaggtgcgttttacgtatagtggaagaagaaattttgtttaaaaggaaacgacaccatggagctgcgtttaagga |
9963561 |
T |
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| Q |
210 |
acatatttggtttgtgaggtgtaaaagagaatggaggaggttaaagttagtgatatttggggtaataaacgacgacgtttctgatgatg |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9963562 |
acatatttggtttgtgaggtgtaaaagagaatggaggaggttaaagttagtgatatttggggtaataaacgacgacgtttctgatgatg |
9963650 |
T |
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