View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2111_low_4 (Length: 428)
Name: NF2111_low_4
Description: NF2111
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2111_low_4 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 335; Significance: 0; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 9 - 414
Target Start/End: Complemental strand, 28214475 - 28214067
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaa--- |
105 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
28214475 |
agcaaaggctgtacgactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttagtcagatgaggcaaaactgtcctgacaacaataa |
28214376 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagca |
205 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28214375 |
gaataatgtcagcagcaacggaatgttttcgacgtttacagtttcaaagccaatgaatgttcatcactctaataacaaagggatgtcatacaagcaagca |
28214276 |
T |
|
| Q |
206 |
ttgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
305 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28214275 |
ttgtcatctgcagtgtcatctggagcatcttttgacactcactactatcagagattgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
28214176 |
T |
|
| Q |
306 |
ctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaacct |
405 |
Q |
| |
|
|||||||||||||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28214175 |
ctgaagagaagacagccaaattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgatgaaattgtctaacct |
28214076 |
T |
|
| Q |
406 |
tgatgtttt |
414 |
Q |
| |
|
||||||||| |
|
|
| T |
28214075 |
tgatgtttt |
28214067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 9 - 414
Target Start/End: Original strand, 28221809 - 28222217
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaa--- |
105 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
28221809 |
agcaaaggctctacgactttcaaggaacagggcaaccagacccgagtatacctctcgatttcctcagtcagatgaggcaaaactgtcctgacaacaataa |
28221908 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagca |
205 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
28221909 |
gaataatgtcatcagcaacggaatgttttcgacgtttacagtttcaaagccaatgaatgttcatcactctaataacaaagggatgtcatacaagcaagca |
28222008 |
T |
|
| Q |
206 |
ttgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
305 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28222009 |
ttgtcatctgcagtgtcatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
28222108 |
T |
|
| Q |
306 |
ctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaacct |
405 |
Q |
| |
|
|| |||||||||| |||| |||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
28222109 |
cttaagagaagactgccatattggtttttgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaacct |
28222208 |
T |
|
| Q |
406 |
tgatgtttt |
414 |
Q |
| |
|
||||||||| |
|
|
| T |
28222209 |
tgatgtttt |
28222217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 9 - 414
Target Start/End: Original strand, 32310361 - 32310769
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaaca---a |
105 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| |||| ||||||||||||||||| | |
|
|
| T |
32310361 |
agcaaaggctgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaa |
32310460 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagca |
205 |
Q |
| |
|
||| ||| ||||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
32310461 |
gaacaatttcagcagcaacggcacgttttcgtcgtttacagcttcaaagccaatgaacgttcatcactctaatgacaaagggatgtcatacatgcaagca |
32310560 |
T |
|
| Q |
206 |
ttgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
305 |
Q |
| |
|
|||||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32310561 |
ttgtcatctgcagtgccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
32310660 |
T |
|
| Q |
306 |
ctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaacct |
405 |
Q |
| |
|
|| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
32310661 |
ctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaacct |
32310760 |
T |
|
| Q |
406 |
tgatgtttt |
414 |
Q |
| |
|
|||||||| |
|
|
| T |
32310761 |
cgatgtttt |
32310769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 9 - 414
Target Start/End: Complemental strand, 32786914 - 32786503
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaaca---a |
105 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||| ||||||||||||||||| | |
|
|
| T |
32786914 |
agcaaaggctgtacgactttcaaggaacagggcaaccagacccaagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaa |
32786815 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaata---accaagggatgtcatacaagcaa |
202 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||||||||| |||||||| | |||||||||||||||||| || || ||||||||||||||| |||| |
|
|
| T |
32786814 |
gaataatatcagcagcaacggcacgttttcgacgtttacaatttcaaagaaaatgaatgttcatcactctagtagtgacaaagggatgtcatacatgcaa |
32786715 |
T |
|
| Q |
203 |
gcattgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctga |
302 |
Q |
| |
|
||||||||| |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32786714 |
gcattgtcatctgcagtgccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctga |
32786615 |
T |
|
| Q |
303 |
tggctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaa |
402 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
32786614 |
tggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaa |
32786515 |
T |
|
| Q |
403 |
ccttgatgtttt |
414 |
Q |
| |
|
|||||||||||| |
|
|
| T |
32786514 |
ccttgatgtttt |
32786503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 9 - 414
Target Start/End: Complemental strand, 32814122 - 32813714
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaaca---a |
105 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| |||| ||||||||||||||||| | |
|
|
| T |
32814122 |
agcaaaggttgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaa |
32814023 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagca |
205 |
Q |
| |
|
||| ||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||| | ||||||| || ||||||||||||||| ||||||| |
|
|
| T |
32814022 |
gaacaatttcagcagcaacggcacgttttcgacgtttacagcttcaaagccaatgaatgttcaactctctaatgacaaagggatgtcatacatgcaagca |
32813923 |
T |
|
| Q |
206 |
ttgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
305 |
Q |
| |
|
|||||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32813922 |
ttgtcatctgcagtaccatctggagcatcttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
32813823 |
T |
|
| Q |
306 |
ctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaacct |
405 |
Q |
| |
|
|| |||||||||| ||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
32813822 |
ctcaagagaagactgccagattggtttttgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaacct |
32813723 |
T |
|
| Q |
406 |
tgatgtttt |
414 |
Q |
| |
|
||||||||| |
|
|
| T |
32813722 |
tgatgtttt |
32813714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 9 - 414
Target Start/End: Complemental strand, 32564459 - 32564051
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaaca---a |
105 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||| |||| ||||||||||||||||| | |
|
|
| T |
32564459 |
agcaaaggttgtacgactttcaaggaacagggcaaccagatccgagtatacctctcgattttctcagtcagatgaggctaaactgtcctgacaacagtaa |
32564360 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagca |
205 |
Q |
| |
|
||| ||| ||||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||||||||||||| || ||||||||||||||| ||||||| |
|
|
| T |
32564359 |
gaacaatttcagcagcaacggcacgttttcgtcgtttacagcttcaaagccaatgaacgttcatcactctaatgacaaagggatgtcatacatgcaagca |
32564260 |
T |
|
| Q |
206 |
ttgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
305 |
Q |
| |
|
|||||| ||||||| ||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32564259 |
ttgtcatctgcagttccatctggagcattttttgacactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctgatgg |
32564160 |
T |
|
| Q |
306 |
ctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaacct |
405 |
Q |
| |
|
|| |||||||||| ||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||| |||||| |||||||||||||||| |
|
|
| T |
32564159 |
ctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatctacctttcggatggatttcgcaagggttatgttgaaattgtctaacct |
32564060 |
T |
|
| Q |
406 |
tgatgtttt |
414 |
Q |
| |
|
||||||||| |
|
|
| T |
32564059 |
tgatgtttt |
32564051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 9 - 414
Target Start/End: Original strand, 32306228 - 32306639
Alignment:
| Q |
9 |
agcaaaggctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaaca---a |
105 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| || | ||||||||||||| ||| | |
|
|
| T |
32306228 |
agcaaaggttgtacgactttcaaggaacagggcaaccagacccgagtatacctctcgattttttcagtctgatgagactaaactgtcctgactacagtaa |
32306327 |
T |
|
| Q |
106 |
gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaagccagtgaatgttcatcactctaata---accaagggatgtcatacaagcaa |
202 |
Q |
| |
|
||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| || || ||||||||||||||| |||| |
|
|
| T |
32306328 |
gaacaatatcaacagcaacggcacgttttcgacgtttacagtttcaaagccagtaaatgctcatcactctagtagtgacaaagggatgtcatacatgcaa |
32306427 |
T |
|
| Q |
203 |
gcattgtcaactgcagtgtcatctggcgcatcttttggcactcactactatcagagtttgttgagaggaagagggttattgtttgctgatcaacagctga |
302 |
Q |
| |
|
||||||||| |||||||| ||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
32306428 |
gcattgtcatctgcagtgccatctggagcatattttgacactcactactatcagagtttgttgagaggaagagggttattgttttctgatcaacagctga |
32306527 |
T |
|
| Q |
303 |
tggctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaa |
402 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
32306528 |
tggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaa |
32306627 |
T |
|
| Q |
403 |
ccttgatgtttt |
414 |
Q |
| |
|
|||||||||||| |
|
|
| T |
32306628 |
ccttgatgtttt |
32306639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 288 - 414
Target Start/End: Complemental strand, 32793012 - 32792886
Alignment:
| Q |
288 |
ctgatcaacagctgatggctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttat |
387 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
32793012 |
ctgatcaacagctgatggctcaagagaagactgccagattggtttctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttat |
32792913 |
T |
|
| Q |
388 |
gatgaaattgtctaaccttgatgtttt |
414 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
32792912 |
gttgaaattgtctaaccttgatgtttt |
32792886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 414
Target Start/End: Complemental strand, 32799636 - 32799554
Alignment:
| Q |
332 |
tctgcttatgcttcagatgatggatcaaccgttcggatggatttcgcaagagttatgatgaaattgtctaaccttgatgtttt |
414 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
32799636 |
tctgcttatgcttcagatgacggatcaacctttcggatggatttcgcaagggttatgttgaaattgtctaaccttgatgtttt |
32799554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 32317376 - 32317548
Alignment:
| Q |
57 |
tacctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaa---gaataatgtcagcagcaacggcatgttttcgacgtttacagtttcaaa |
153 |
Q |
| |
|
||||||||||||| || |||| || |||||||| |||||||||||||| ||||||| |||||| |||| | | ||||||||| ||| ||||||||| |
|
|
| T |
32317376 |
tacctctcgattttctaagtcatatgaggcaaaattgtcctgacaacaattagaataatatcagcaacaacagtacattttcgacggttatagtttcaaa |
32317475 |
T |
|
| Q |
154 |
gccagtgaatgttcatcactctaataaccaagggatgtcatacaagcaagcattgtcaactgcagtgtcatct |
226 |
Q |
| |
|
|||| | ||||| |||||||||||||| ||||||| |||||| |||||| |||||| ||||||| ||||| |
|
|
| T |
32317476 |
gccaattaatgtccatcactctaataataaagggatatcatacgcgcaagctttgtcatatgcagtgccatct |
32317548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 273 - 414
Target Start/End: Original strand, 28158816 - 28158957
Alignment:
| Q |
273 |
gagggttattgtttgctgatcaacagctgatggctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatgga |
372 |
Q |
| |
|
||||| || |||| ||| |||||||||| ||||||| |||||| || || |||||| | |||||| ||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
28158816 |
gagggctactgttcgctaatcaacagctcatggctggagagaacactgctagattgatttctgctaatgcttccgatgacggatcaacctttcggatgga |
28158915 |
T |
|
| Q |
373 |
tttcgcaagagttatgatgaaattgtctaaccttgatgtttt |
414 |
Q |
| |
|
||| ||||| || || ||||||||||||| |||||||||| |
|
|
| T |
28158916 |
tttggcaagggtggtgttgaaattgtctaatattgatgtttt |
28158957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 28171409 - 28171502
Alignment:
| Q |
17 |
ctgtacaactttcaaggaacagggcaaccagacccgagtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaagaata |
110 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||| |||||||| ||| ||||| ||| || |||| ||||||||||||| ||||||||||||| |
|
|
| T |
28171409 |
ctgtacatctttcaaggaacagcgcaaccagacctgagtatacttcttgatttgcttagtaagatgaggcaaaactgtcaagacaacaagaata |
28171502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 107
Target Start/End: Original strand, 28174609 - 28174706
Alignment:
| Q |
11 |
caaaggctgtacaactttcaaggaacagggcaaccagacccg-agtatacctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaaga |
107 |
Q |
| |
|
||||| |||||||||||| ||||||||| ||||||||||| | ||||| |||| ||||| ||| ||||||| |||| ||||||||| |||||||||| |
|
|
| T |
28174609 |
caaagtctgtacaactttaaaggaacagcgcaaccagacctgtcgtatagctcttgattttcttagtcagatgaggctaaactgtccagacaacaaga |
28174706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 28183014 - 28183099
Alignment:
| Q |
27 |
ttcaaggaacagggcaaccagacccgagtata--cctctcgatttccttggtcagatcaggcaaaactgtcctgacaacaagaata |
110 |
Q |
| |
|
||||||||||| ||||||| || | ||||||| | ||| ||||||||| ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
28183014 |
ttcaaggaacaaggcaaccggatctgagtatatacttcttgatttccttagtcagatgaggcaaaactgtccagacaacaagaata |
28183099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 381
Target Start/End: Original strand, 28177479 - 28177587
Alignment:
| Q |
273 |
gagggttattgtttgctgatcaacagctgatggctgaagagaagacagccagattggtatctgcttatgcttcagatgatggatcaaccgttcggatgga |
372 |
Q |
| |
|
||||| || |||| ||| |||||||||||||||||| ||||| | || || ||| | |||||| ||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
28177479 |
gagggctactgttcgctaatcaacagctgatggctggagagagcagtgctaggttgatttctgctaatgcttccgatgacggatcaacctttcggatgga |
28177578 |
T |
|
| Q |
373 |
tttcgcaag |
381 |
Q |
| |
|
||| ||||| |
|
|
| T |
28177579 |
ttttgcaag |
28177587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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