View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21120_high_63 (Length: 309)
Name: NF21120_high_63
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21120_high_63 |
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Alignment Details
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 2117513 - 2117215
Alignment:
| Q |
1 |
tcattcttctgcttgaatccatcttcacaagttgttgagtcatcaatgattgagcttagcttaatattacattcttcataacgtttggctttataatctc |
100 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117513 |
tcattcttttgcttgaatccatcttcacaagttgttgagtcatcaatgattgagcttagcttaatattacattcttcataacgtttggctttataatctc |
2117414 |
T |
|
| Q |
101 |
gaatggcttctctaaaagttgtaattgcatcggaatatacatcaagacaatcatccaagcattctttgataaaggggtctctagttttcttctctaaaag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117413 |
gaatggcttctctaaaagttgtaattgcatcggaatatacatcaagacaatcatccaagcattctttgataaaggggtctctagttttcttctctaaaag |
2117314 |
T |
|
| Q |
201 |
ctctttgatgtaatcacaagtatttgtcacattgtgccttgttatcttgatagatatgagacctaattcttcaaggtttttggcacattgggtcctatg |
299 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2117313 |
ctctttgatgtaatcacaagtatttgtcacattgtgccttgttatcttgatagatatgagacctaattcttcaaggtttttggcacattgggtcctatg |
2117215 |
T |
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