View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21120_high_70 (Length: 290)
Name: NF21120_high_70
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21120_high_70 |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 26455050 - 26455329
Alignment:
| Q |
1 |
atgatgattttttcttgcattaatgtaggtgttaaaaaatgggttgcctctcttgtaatcaccacgtagttggcttcctcagttgtatcttcaacaatgc |
100 |
Q |
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| T |
26455050 |
atgatgattttttcttgcattaatgtaggtgttaaaaaatgggttgcctctcttgtaatcaccacgtagttggcttcctcagttgtatcttcaacaatgc |
26455149 |
T |
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| Q |
101 |
cttccttgttctatttcccataattacacttccatacttttgtttgttgtgacttggaacaatggcttcctcagttgcatcttcagtttaacttcttggt |
200 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26455150 |
cttacttgttctatttcccataattacacttccatacttttgtttgttgtgacttggaacaatggcttcctcagttgcatcttcagtttaacttcttggt |
26455249 |
T |
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| Q |
201 |
gagagtcacgaattgggaagccatagggttgtggttgaccataaaagttctataggcatccagctccaaaacttcctatg |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26455250 |
gagagtcacgaattgggaagccatagggttgtggttgaccataaaagttctataggcatccagctccaaaacttcctatg |
26455329 |
T |
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