View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21120_high_80 (Length: 267)
Name: NF21120_high_80
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21120_high_80 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 43 - 254
Target Start/End: Original strand, 26909380 - 26909591
Alignment:
| Q |
43 |
agccactgtagccaatcaccgccgcataaaccgccagtgcatgctagcccgccaccgagagccacaacagggaatactgtataaatcgtgggtgattaaa |
142 |
Q |
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| T |
26909380 |
agccgctgtagccaatcaccgccacataaaccgccagtgcatgctagaccgccaccgagagccacaacagggaatactgtataaatcgtgggtgattaaa |
26909479 |
T |
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| Q |
143 |
ttaaactaaatagaatatgtcattcgaaaacaaaatggcacaatggttgaagaagtggactgaccagtacaataaaccaaggcatcagaacataatacta |
242 |
Q |
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| T |
26909480 |
ttaaactaaatagaatatgtcatttgaaaacaaaatggcacaatggttgaaaaagtggactgaccaatacactaaaccaaggcatcagaacataatacta |
26909579 |
T |
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| Q |
243 |
ctgactcggttc |
254 |
Q |
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| T |
26909580 |
ctatctcggttc |
26909591 |
T |
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