View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21120_high_9 (Length: 643)

Name: NF21120_high_9
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21120_high_9
NF21120_high_9
[»] chr2 (47 HSPs)
chr2 (163-510)||(31170602-31170945)
chr2 (162-486)||(24776243-24776563)
chr2 (164-510)||(16269581-16269923)
chr2 (163-510)||(12407269-12407612)
chr2 (166-510)||(14198555-14198894)
chr2 (164-510)||(35316952-35317294)
chr2 (163-510)||(305443-305788)
chr2 (165-510)||(22551741-22552082)
chr2 (164-510)||(43847536-43847878)
chr2 (162-466)||(1789330-1789630)
chr2 (216-510)||(20605178-20605468)
chr2 (166-486)||(44765667-44765974)
chr2 (176-480)||(32125152-32125455)
chr2 (169-486)||(5093049-5093352)
chr2 (352-510)||(9120200-9120358)
chr2 (163-479)||(28844444-28844756)
chr2 (162-479)||(33135511-33135823)
chr2 (164-285)||(20605042-20605164)
chr2 (163-285)||(9120057-9120180)
chr2 (351-479)||(10657479-10657607)
chr2 (356-479)||(18177345-18177468)
chr2 (356-479)||(25288237-25288360)
chr2 (162-461)||(26788672-26788969)
chr2 (163-418)||(26601270-26601521)
chr2 (169-479)||(28740302-28740598)
chr2 (368-479)||(43078653-43078764)
chr2 (162-420)||(7026491-7026746)
chr2 (162-281)||(378867-378987)
chr2 (360-486)||(10125302-10125418)
chr2 (357-479)||(13833441-13833553)
chr2 (163-253)||(19144913-19145004)
chr2 (162-283)||(215425-215547)
chr2 (162-254)||(3463559-3463652)
chr2 (351-479)||(3463745-3463863)
chr2 (357-420)||(379016-379079)
chr2 (168-241)||(43078569-43078643)
chr2 (351-409)||(3574920-3574978)
chr2 (351-409)||(6224626-6224684)
chr2 (422-479)||(6224576-6224633)
chr2 (182-283)||(10125492-10125594)
chr2 (192-243)||(3574765-3574817)
chr2 (163-283)||(13833622-13833743)
chr2 (168-228)||(43825085-43825145)
chr2 (164-211)||(14920619-14920666)
chr2 (190-239)||(21987316-21987366)
chr2 (351-400)||(21370638-21370687)
chr2 (351-391)||(215322-215362)
[»] chr5 (43 HSPs)
chr5 (162-486)||(21146954-21147274)
chr5 (165-486)||(33656040-33656359)
chr5 (165-510)||(27458925-27459265)
chr5 (163-510)||(32157869-32158217)
chr5 (327-510)||(7016714-7016897)
chr5 (193-480)||(139191-139474)
chr5 (351-480)||(5272924-5273053)
chr5 (165-452)||(6460682-6460965)
chr5 (313-466)||(849180-849334)
chr5 (162-479)||(14000111-14000424)
chr5 (162-476)||(4550266-4550576)
chr5 (161-486)||(1152102-1152423)
chr5 (163-254)||(7016923-7017015)
chr5 (351-479)||(13926003-13926131)
chr5 (351-479)||(39852417-39852545)
chr5 (360-479)||(7947579-7947698)
chr5 (162-245)||(43319133-43319218)
chr5 (167-285)||(5273156-5273276)
chr5 (351-486)||(9689730-9689864)
chr5 (351-446)||(14465266-14465361)
chr5 (168-420)||(4240517-4240765)
chr5 (356-479)||(5949185-5949298)
chr5 (166-283)||(16894057-16894174)
chr5 (351-486)||(22746369-22746496)
chr5 (167-247)||(9689553-9689633)
chr5 (168-409)||(37013807-37014044)
chr5 (360-420)||(1461203-1461263)
chr5 (168-243)||(7948554-7948630)
chr5 (360-479)||(40013718-40013827)
chr5 (360-486)||(9220716-9220832)
chr5 (162-283)||(40013899-40014018)
chr5 (190-245)||(1511587-1511643)
chr5 (165-228)||(27786210-27786273)
chr5 (163-281)||(22746185-22746304)
chr5 (190-243)||(26795638-26795692)
chr5 (190-243)||(26806702-26806756)
chr5 (172-243)||(13925828-13925900)
chr5 (163-241)||(40410588-40410667)
chr5 (210-246)||(849166-849203)
chr5 (162-283)||(5948996-5949118)
chr5 (206-254)||(14465452-14465501)
chr5 (192-243)||(26806581-26806633)
chr5 (163-241)||(28594449-28594529)
[»] chr6 (26 HSPs)
chr6 (162-510)||(6197453-6197797)
chr6 (163-485)||(2300738-2301056)
chr6 (165-486)||(1391513-1391830)
chr6 (162-486)||(29076483-29076805)
chr6 (162-486)||(29111456-29111779)
chr6 (192-510)||(28002581-28002895)
chr6 (163-486)||(7051732-7052051)
chr6 (162-479)||(31895582-31895895)
chr6 (163-479)||(34773296-34773608)
chr6 (162-479)||(14262439-14262752)
chr6 (351-479)||(34759056-34759184)
chr6 (351-479)||(7497147-7497274)
chr6 (356-479)||(31067569-31067682)
chr6 (351-479)||(30385075-30385191)
chr6 (371-479)||(4200443-4200541)
chr6 (437-486)||(2238668-2238717)
chr6 (445-485)||(11113733-11113773)
chr6 (190-243)||(5957151-5957205)
chr6 (190-243)||(7100189-7100243)
chr6 (190-243)||(8794387-8794441)
chr6 (162-243)||(31609697-31609779)
chr6 (191-254)||(656879-656944)
chr6 (313-380)||(656997-657065)
chr6 (190-239)||(708940-708990)
chr6 (393-451)||(657067-657122)
chr6 (356-400)||(3848286-3848330)
[»] chr1 (69 HSPs)
chr1 (164-510)||(49198245-49198585)
chr1 (162-510)||(21222028-21222371)
chr1 (162-510)||(45759985-45760330)
chr1 (163-510)||(28824349-28824691)
chr1 (164-486)||(35279554-35279872)
chr1 (163-486)||(6304252-6304573)
chr1 (162-510)||(50192526-50192871)
chr1 (163-481)||(49417965-49418279)
chr1 (167-510)||(47654327-47654669)
chr1 (165-486)||(35679128-35679445)
chr1 (216-510)||(19451784-19452074)
chr1 (162-451)||(730029-730314)
chr1 (180-486)||(29556006-29556305)
chr1 (229-486)||(45535892-45536150)
chr1 (216-510)||(47780644-47780935)
chr1 (162-476)||(32588963-32589274)
chr1 (356-509)||(31572174-31572327)
chr1 (162-486)||(33025392-33025703)
chr1 (162-479)||(6312454-6312767)
chr1 (163-479)||(29396395-29396707)
chr1 (351-486)||(9577432-9577567)
chr1 (170-457)||(48524208-48524490)
chr1 (162-479)||(25612037-25612350)
chr1 (163-285)||(953700-953823)
chr1 (351-476)||(51701645-51701770)
chr1 (351-479)||(48177469-48177597)
chr1 (168-479)||(15835060-15835367)
chr1 (162-285)||(22183250-22183374)
chr1 (171-478)||(46327931-46328234)
chr1 (351-486)||(37014640-37014775)
chr1 (162-283)||(19452048-19452170)
chr1 (170-479)||(28387400-28387705)
chr1 (356-479)||(9322507-9322630)
chr1 (162-285)||(14494092-14494213)
chr1 (165-254)||(47780502-47780592)
chr1 (359-418)||(955823-955882)
chr1 (162-254)||(9322727-9322820)
chr1 (351-479)||(38536106-38536224)
chr1 (351-479)||(38558324-38558442)
chr1 (356-486)||(48668785-48668905)
chr1 (162-400)||(49230766-49231000)
chr1 (351-479)||(29219351-29219469)
chr1 (175-228)||(31572417-31572470)
chr1 (162-420)||(29219168-29219420)
chr1 (351-442)||(51085860-51085951)
chr1 (162-243)||(8141366-8141448)
chr1 (351-409)||(18798556-18798614)
chr1 (163-243)||(9577670-9577751)
chr1 (163-215)||(28541385-28541437)
chr1 (190-243)||(19007584-19007638)
chr1 (351-475)||(5495117-5495231)
chr1 (191-283)||(18798400-18798493)
chr1 (449-509)||(48524805-48524865)
chr1 (359-409)||(31622536-31622586)
chr1 (190-247)||(38536281-38536339)
chr1 (190-247)||(38558499-38558557)
chr1 (170-239)||(42290732-42290802)
chr1 (162-243)||(42657711-42657793)
chr1 (190-243)||(48194615-48194669)
chr1 (190-243)||(48203373-48203427)
chr1 (175-243)||(25831144-25831213)
chr1 (163-243)||(45272468-45272549)
chr1 (168-251)||(5495326-5495410)
chr1 (422-478)||(18798607-18798663)
chr1 (168-251)||(48177692-48177776)
chr1 (376-478)||(38319996-38320098)
chr1 (190-243)||(14555316-14555370)
chr1 (351-452)||(47784451-47784542)
chr1 (190-243)||(51826841-51826895)
[»] chr3 (102 HSPs)
chr3 (163-510)||(996062-996404)
chr3 (163-510)||(10139122-10139465)
chr3 (163-486)||(19253714-19254033)
chr3 (162-510)||(20498096-20498439)
chr3 (164-510)||(3206181-3206514)
chr3 (165-510)||(37820453-37820794)
chr3 (163-486)||(33807798-33808121)
chr3 (163-510)||(35337621-35337963)
chr3 (163-486)||(6589450-6589770)
chr3 (162-486)||(40246730-40247050)
chr3 (163-486)||(29448858-29449179)
chr3 (185-486)||(44762037-44762334)
chr3 (165-486)||(54625481-54625798)
chr3 (163-486)||(25418253-25418572)
chr3 (163-471)||(51699495-51699798)
chr3 (313-486)||(3999645-3999819)
chr3 (19-161)||(1139539-1139681)
chr3 (164-485)||(52114418-52114734)
chr3 (168-478)||(29029898-29030203)
chr3 (313-480)||(33996547-33996715)
chr3 (163-431)||(1440007-1440270)
chr3 (162-479)||(36674137-36674450)
chr3 (313-486)||(53929128-53929302)
chr3 (351-486)||(6035053-6035188)
chr3 (161-479)||(11431411-11431725)
chr3 (357-486)||(5825139-5825268)
chr3 (170-479)||(44906520-44906825)
chr3 (351-479)||(18749683-18749811)
chr3 (164-451)||(22057651-22057933)
chr3 (357-479)||(40897221-40897343)
chr3 (398-486)||(6131233-6131321)
chr3 (351-479)||(32580247-32580375)
chr3 (356-479)||(34484037-34484160)
chr3 (351-479)||(17946359-17946487)
chr3 (356-479)||(54628920-54629043)
chr3 (351-479)||(26107332-26107460)
chr3 (351-486)||(27899415-27899540)
chr3 (162-251)||(12734070-12734160)
chr3 (356-479)||(31646293-31646414)
chr3 (351-479)||(48379228-48379356)
chr3 (351-479)||(50903247-50903375)
chr3 (375-486)||(1439894-1440005)
chr3 (351-466)||(51737746-51737861)
chr3 (352-486)||(52079999-52080117)
chr3 (351-479)||(52810449-52810577)
chr3 (162-420)||(10660421-10660675)
chr3 (351-479)||(52617978-52618100)
chr3 (162-409)||(23753463-23753706)
chr3 (360-454)||(55235264-55235359)
chr3 (351-475)||(20833063-20833187)
chr3 (351-486)||(39842494-39842619)
chr3 (433-486)||(33807680-33807733)
chr3 (164-222)||(33996751-33996809)
chr3 (351-479)||(10728658-10728776)
chr3 (351-479)||(37454932-37455050)
chr3 (163-254)||(15493958-15494050)
chr3 (162-218)||(16010749-16010805)
chr3 (411-485)||(44276506-44276580)
chr3 (166-283)||(18749460-18749578)
chr3 (351-479)||(39038111-39038229)
chr3 (351-479)||(50762067-50762185)
chr3 (163-283)||(27240441-27240562)
chr3 (351-414)||(539476-539539)
chr3 (351-468)||(6975817-6975924)
chr3 (162-247)||(10728833-10728919)
chr3 (162-251)||(31646514-31646604)
chr3 (161-283)||(50762248-50762371)
chr3 (163-243)||(39842667-39842748)
chr3 (162-283)||(50903441-50903563)
chr3 (168-247)||(52810312-52810392)
chr3 (190-243)||(10225795-10225849)
chr3 (162-247)||(17946217-17946302)
chr3 (168-239)||(48379050-48379122)
chr3 (162-241)||(52618205-52618285)
chr3 (191-283)||(54628758-54628851)
chr3 (162-247)||(12103518-12103602)
chr3 (165-247)||(38772266-38772349)
chr3 (190-243)||(10105019-10105073)
chr3 (190-243)||(10216166-10216220)
chr3 (162-243)||(26107147-26107229)
chr3 (190-243)||(28146264-28146318)
chr3 (205-254)||(53929345-53929395)
chr3 (191-243)||(2024122-2024175)
chr3 (422-479)||(45862983-45863040)
chr3 (168-247)||(539615-539695)
chr3 (208-284)||(6131410-6131486)
chr3 (411-479)||(15492874-15492942)
chr3 (351-407)||(23535890-23535946)
chr3 (162-218)||(27899272-27899328)
chr3 (164-243)||(45926950-45927034)
chr3 (164-254)||(52079881-52079965)
chr3 (190-240)||(6035293-6035344)
chr3 (163-241)||(19552155-19552234)
chr3 (163-241)||(20832882-20832961)
chr3 (165-247)||(55235076-55235159)
chr3 (187-228)||(46749273-46749314)
chr3 (165-241)||(50900454-50900531)
chr3 (163-235)||(51737971-51738044)
chr3 (192-243)||(10225674-10225726)
chr3 (423-478)||(12103733-12103789)
chr3 (162-241)||(36055014-36055094)
chr3 (163-241)||(40897030-40897110)
[»] chr8 (53 HSPs)
chr8 (162-510)||(42735252-42735596)
chr8 (163-486)||(23115168-23115486)
chr8 (162-486)||(26374429-26374747)
chr8 (162-510)||(2704794-2705138)
chr8 (165-486)||(42938116-42938433)
chr8 (165-510)||(7506874-7507215)
chr8 (163-510)||(5576595-5576939)
chr8 (165-510)||(42937250-42937582)
chr8 (262-510)||(24501788-24502031)
chr8 (167-510)||(41478989-41479318)
chr8 (167-510)||(43959549-43959878)
chr8 (351-485)||(10392237-10392371)
chr8 (164-474)||(32711305-32711599)
chr8 (162-479)||(14782141-14782454)
chr8 (162-479)||(44725816-44726129)
chr8 (162-476)||(18958736-18959046)
chr8 (356-486)||(4403184-4403314)
chr8 (351-479)||(9288463-9288591)
chr8 (351-479)||(10295386-10295515)
chr8 (351-479)||(43166696-43166824)
chr8 (168-479)||(19717887-19718194)
chr8 (164-254)||(24214817-24214908)
chr8 (170-476)||(39467477-39467778)
chr8 (351-479)||(26856139-26856267)
chr8 (358-480)||(4950021-4950143)
chr8 (162-247)||(24502004-24502090)
chr8 (162-247)||(26373691-26373778)
chr8 (359-486)||(39189815-39189940)
chr8 (163-479)||(7466223-7466525)
chr8 (351-479)||(18305977-18306095)
chr8 (162-409)||(4031334-4031577)
chr8 (359-466)||(13478269-13478376)
chr8 (351-420)||(16362268-16362337)
chr8 (351-479)||(32497597-32497715)
chr8 (357-465)||(8410416-8410526)
chr8 (168-283)||(32497376-32497492)
chr8 (163-285)||(8543407-8543534)
chr8 (162-420)||(42305850-42306104)
chr8 (422-486)||(9770439-9770503)
chr8 (351-409)||(31623767-31623825)
chr8 (351-420)||(37857191-37857260)
chr8 (168-251)||(10295610-10295694)
chr8 (168-283)||(43166845-43166961)
chr8 (162-228)||(9288703-9288769)
chr8 (163-243)||(16362084-16362165)
chr8 (168-254)||(39189997-39190084)
chr8 (162-283)||(4402994-4403116)
chr8 (163-243)||(31623583-31623664)
chr8 (163-283)||(18306158-18306279)
chr8 (164-239)||(35142041-35142117)
chr8 (168-239)||(43308520-43308592)
chr8 (163-241)||(29260283-29260362)
chr8 (168-247)||(9771050-9771128)
[»] chr4 (96 HSPs)
chr4 (163-510)||(25331018-25331361)
chr4 (162-486)||(41881082-41881404)
chr4 (163-486)||(22201902-22202221)
chr4 (174-485)||(32950837-32951144)
chr4 (162-508)||(1044696-1045035)
chr4 (165-486)||(55302732-55303049)
chr4 (165-486)||(37046450-37046769)
chr4 (163-510)||(30009653-30009996)
chr4 (163-509)||(39479332-39479676)
chr4 (165-456)||(28541587-28541874)
chr4 (166-486)||(1112784-1113099)
chr4 (184-510)||(34228559-34228880)
chr4 (167-509)||(31314719-31315043)
chr4 (165-510)||(24130957-24131289)
chr4 (165-486)||(7007262-7007580)
chr4 (166-486)||(46635648-46635959)
chr4 (162-465)||(19740929-19741227)
chr4 (313-486)||(12112977-12113151)
chr4 (165-429)||(25504696-25504955)
chr4 (351-508)||(41320881-41321038)
chr4 (313-486)||(42786716-42786890)
chr4 (162-479)||(5441290-5441603)
chr4 (163-485)||(40537161-40537464)
chr4 (352-510)||(3436665-3436823)
chr4 (162-479)||(27767942-27768255)
chr4 (163-479)||(54341031-54341343)
chr4 (163-442)||(23464840-23465117)
chr4 (351-456)||(7249795-7249900)
chr4 (313-457)||(25446082-25446227)
chr4 (167-486)||(53275727-53276046)
chr4 (354-486)||(27454078-27454210)
chr4 (351-479)||(37828409-37828537)
chr4 (351-479)||(48261198-48261326)
chr4 (162-479)||(51320807-51321120)
chr4 (162-479)||(54853475-54853788)
chr4 (357-477)||(44770862-44770982)
chr4 (351-486)||(9163147-9163274)
chr4 (165-285)||(7249968-7250090)
chr4 (351-476)||(37915898-37916023)
chr4 (351-479)||(32322162-32322290)
chr4 (163-285)||(41320637-41320758)
chr4 (163-246)||(42786654-42786739)
chr4 (168-479)||(30967316-30967613)
chr4 (393-479)||(8711979-8712065)
chr4 (351-479)||(23987285-23987403)
chr4 (357-479)||(12913301-12913413)
chr4 (351-486)||(39307253-39307388)
chr4 (357-479)||(56445362-56445474)
chr4 (393-479)||(24736448-24736534)
chr4 (351-479)||(41725196-41725321)
chr4 (411-486)||(11090435-11090510)
chr4 (162-243)||(37915671-37915753)
chr4 (165-285)||(49469210-49469331)
chr4 (162-285)||(20021230-20021354)
chr4 (163-422)||(29649731-29649986)
chr4 (351-479)||(36479249-36479366)
chr4 (165-241)||(25445983-25446059)
chr4 (357-442)||(28371001-28371086)
chr4 (169-409)||(49834890-49835126)
chr4 (371-477)||(20021424-20021531)
chr4 (169-247)||(28370859-28370938)
chr4 (351-485)||(28483970-28484093)
chr4 (351-480)||(41581795-41581923)
chr4 (162-247)||(23987142-23987228)
chr4 (351-409)||(32684065-32684123)
chr4 (169-208)||(44775947-44775986)
chr4 (351-409)||(5800049-5800107)
chr4 (191-251)||(37828632-37828693)
chr4 (351-420)||(50018322-50018391)
chr4 (351-479)||(49501526-49501646)
chr4 (351-479)||(49507591-49507711)
chr4 (168-254)||(24736336-24736422)
chr4 (171-241)||(36728052-36728123)
chr4 (190-243)||(38230797-38230851)
chr4 (162-243)||(44646718-44646800)
chr4 (190-243)||(53271934-53271988)
chr4 (191-247)||(12913138-12913195)
chr4 (165-254)||(27454315-27454407)
chr4 (191-243)||(28483898-28483951)
chr4 (163-239)||(28847111-28847188)
chr4 (199-247)||(44771046-44771095)
chr4 (164-243)||(41761978-41762058)
chr4 (168-254)||(467775-467862)
chr4 (214-285)||(3436531-3436603)
chr4 (162-243)||(28100587-28100670)
chr4 (168-254)||(50018143-50018230)
chr4 (164-241)||(8584012-8584090)
chr4 (168-241)||(32321983-32322057)
chr4 (422-476)||(32684018-32684072)
chr4 (405-478)||(13400814-13400887)
chr4 (170-254)||(29855576-29855661)
chr4 (163-247)||(36479423-36479506)
chr4 (445-478)||(55047641-55047674)
chr4 (192-247)||(32684179-32684235)
chr4 (168-228)||(49501767-49501827)
chr4 (168-228)||(49507832-49507892)
[»] chr7 (88 HSPs)
chr7 (165-485)||(43581090-43581406)
chr7 (162-510)||(30440684-30441028)
chr7 (163-486)||(44343395-44343714)
chr7 (163-510)||(18914710-18915053)
chr7 (165-510)||(973074-973416)
chr7 (162-486)||(12893296-12893616)
chr7 (165-510)||(47914157-47914498)
chr7 (163-510)||(34008904-34009245)
chr7 (163-510)||(40996624-40996968)
chr7 (165-510)||(47879059-47879400)
chr7 (168-486)||(7719259-7719574)
chr7 (167-510)||(20275238-20275577)
chr7 (216-510)||(34695215-34695505)
chr7 (163-486)||(7113342-7113660)
chr7 (313-486)||(7718361-7718535)
chr7 (166-486)||(32142916-32143235)
chr7 (162-486)||(10068347-10068668)
chr7 (165-418)||(31638766-31639015)
chr7 (327-510)||(39219352-39219534)
chr7 (162-467)||(727400-727692)
chr7 (163-479)||(29614770-29615082)
chr7 (162-479)||(28342228-28342541)
chr7 (163-479)||(23101180-23101492)
chr7 (355-456)||(43679491-43679592)
chr7 (168-479)||(39783986-39784293)
chr7 (351-479)||(3022992-3023120)
chr7 (168-479)||(9882243-9882549)
chr7 (351-479)||(18838455-18838583)
chr7 (351-458)||(12963767-12963874)
chr7 (357-486)||(43187356-43187485)
chr7 (163-479)||(7993024-7993336)
chr7 (351-479)||(28034811-28034939)
chr7 (357-476)||(33382709-33382828)
chr7 (163-254)||(8078284-8078376)
chr7 (351-479)||(8675399-8675527)
chr7 (163-283)||(34695120-34695241)
chr7 (351-486)||(12740439-12740573)
chr7 (356-455)||(25805763-25805862)
chr7 (163-486)||(9179765-9180071)
chr7 (162-486)||(3797066-3797376)
chr7 (165-283)||(39219531-39219651)
chr7 (371-479)||(37972873-37972981)
chr7 (168-254)||(43679363-43679451)
chr7 (181-485)||(19251439-19251729)
chr7 (360-479)||(19810874-19810983)
chr7 (371-479)||(41827390-41827498)
chr7 (356-476)||(44256775-44256895)
chr7 (356-508)||(1470213-1470362)
chr7 (351-451)||(32883848-32883948)
chr7 (356-420)||(44121965-44122029)
chr7 (359-442)||(10676463-10676546)
chr7 (190-420)||(37327836-37328062)
chr7 (351-479)||(509722-509840)
chr7 (351-420)||(40460772-40460841)
chr7 (163-223)||(31401585-31401645)
chr7 (162-409)||(17001099-17001342)
chr7 (351-422)||(46405494-46405565)
chr7 (162-283)||(48117790-48117912)
chr7 (183-283)||(10676575-10676676)
chr7 (357-420)||(29585586-29585649)
chr7 (162-247)||(29893004-29893090)
chr7 (162-247)||(43187576-43187662)
chr7 (351-409)||(47066770-47066828)
chr7 (163-243)||(509580-509661)
chr7 (393-469)||(10617026-10617102)
chr7 (190-243)||(3634238-3634292)
chr7 (162-243)||(18838270-18838352)
chr7 (162-243)||(21067763-21067845)
chr7 (351-420)||(33892315-33892384)
chr7 (351-420)||(39028163-39028232)
chr7 (190-283)||(41827223-41827317)
chr7 (191-283)||(12963611-12963704)
chr7 (162-237)||(32883662-32883738)
chr7 (192-243)||(39028008-39028060)
chr7 (356-415)||(447854-447913)
chr7 (191-251)||(1470735-1470791)
chr7 (414-476)||(44623295-44623357)
chr7 (170-251)||(46405660-46405742)
chr7 (191-243)||(33382547-33382600)
chr7 (163-239)||(33892492-33892569)
chr7 (168-247)||(47066631-47066712)
chr7 (191-283)||(40460904-40460997)
chr7 (170-247)||(29585446-29585524)
chr7 (190-243)||(46037355-46037409)
chr7 (191-243)||(34115478-34115531)
chr7 (162-241)||(151855-151935)
chr7 (447-479)||(17001049-17001081)
chr7 (168-239)||(44122142-44122214)
[»] scaffold0400 (1 HSPs)
scaffold0400 (162-510)||(15009-15350)
[»] scaffold0365 (1 HSPs)
scaffold0365 (162-510)||(15652-15993)
[»] scaffold0037 (1 HSPs)
scaffold0037 (163-483)||(100099-100415)
[»] scaffold0151 (2 HSPs)
scaffold0151 (313-510)||(38581-38778)
scaffold0151 (165-246)||(38755-38837)
[»] scaffold0113 (2 HSPs)
scaffold0113 (313-486)||(38895-39069)
scaffold0113 (163-247)||(39087-39172)
[»] scaffold0004 (2 HSPs)
scaffold0004 (313-486)||(102128-102302)
scaffold0004 (165-247)||(102026-102108)
[»] scaffold0276 (1 HSPs)
scaffold0276 (215-485)||(540-806)
[»] scaffold0543 (1 HSPs)
scaffold0543 (168-479)||(10453-10760)
[»] scaffold0110 (2 HSPs)
scaffold0110 (356-479)||(39624-39747)
scaffold0110 (191-251)||(39847-39908)
[»] scaffold0054 (2 HSPs)
scaffold0054 (358-479)||(36914-37035)
scaffold0054 (190-247)||(37057-37115)
[»] scaffold1504 (2 HSPs)
scaffold1504 (351-479)||(936-1063)
scaffold1504 (168-283)||(756-872)
[»] scaffold0042 (2 HSPs)
scaffold0042 (356-479)||(58083-58206)
scaffold0042 (163-243)||(58272-58353)
[»] scaffold0651 (1 HSPs)
scaffold0651 (167-285)||(8654-8773)
[»] scaffold0922 (1 HSPs)
scaffold0922 (162-416)||(4087-4337)
[»] scaffold0347 (2 HSPs)
scaffold0347 (411-486)||(14892-14967)
scaffold0347 (191-243)||(14811-14864)
[»] scaffold0306 (3 HSPs)
scaffold0306 (162-247)||(13811-13897)
scaffold0306 (351-420)||(13954-14023)
scaffold0306 (447-479)||(14040-14072)
[»] scaffold0152 (4 HSPs)
scaffold0152 (162-247)||(21430-21516)
scaffold0152 (351-420)||(21304-21373)
scaffold0152 (447-479)||(21255-21287)
scaffold0152 (447-479)||(28510-28542)
[»] scaffold0839 (1 HSPs)
scaffold0839 (380-466)||(3712-3798)
[»] scaffold0287 (1 HSPs)
scaffold0287 (190-243)||(11793-11847)
[»] scaffold0492 (2 HSPs)
scaffold0492 (168-225)||(12030-12087)
scaffold0492 (168-225)||(11999-12056)
[»] scaffold0007 (1 HSPs)
scaffold0007 (359-452)||(199905-199998)
[»] scaffold0016 (1 HSPs)
scaffold0016 (162-241)||(81789-81869)


Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 31170945 - 31170602
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  31170945 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 31170846  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  31170845 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 31170752  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31170751 attcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 31170652  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  31170651 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 24776243 - 24776563
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||          
T  24776243 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa 24776342  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  24776343 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 24776436  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24776437 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 24776536  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||    
T  24776537 atgaaaacatgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 164 - 510
Target Start/End: Original strand, 16269581 - 16269923
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||       |    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 16269680  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    |||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||||    
T  16269681 tcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 16269774  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16269775 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcat 16269874  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||       |||||||||||||||||    
T  16269875 gaaaacatgagatttcttaggattgtttttttcttttaagattttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 163 - 510
Target Start/End: Original strand, 12407269 - 12407612
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||           
T  12407269 gggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaa 12407368  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaa-agactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||   ||||||||||||||||       ||||||||||    
T  12407369 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggt 12407462  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  12407463 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttca 12407562  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||| |||||       |||||||||||||||||    
T  12407563 tgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 166 - 510
Target Start/End: Complemental strand, 14198894 - 14198555
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||       |||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaa-gtc 14198796  T
Q  265 ttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtatt 363  Q
    ||||||||||||||||| |||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||| |||||||||    
T  14198795 ttgtgttattcaatcaaaatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtatt 14198702  T
Q  364 caaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatga 463  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  14198701 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatga 14198602  T
Q  464 aaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||       |||||||||||||||||    
T  14198601 aaacatgagatttcttaggattgtttttttcttttaagattttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 164 - 510
Target Start/End: Original strand, 35316952 - 35317294
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       |    
T  35316952 ggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 35317051  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    | |||||||||||||||||||||      |||| ||||||       || ||||  |||||||  |||||||||||||||||       |||||||||||    
T  35317052 ttttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggta 35317145  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  35317146 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 35317245  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||| ||||||||||  ||||       |||||||||||||||||    
T  35317246 gaaaacataagatttcttaacattgtttttttcttttaagattttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 305788 - 305443
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||          
T  305788 gggggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 305689  T
Q  261 n-gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      |||||||||||||||||||||||||||| ||      ||||       || |||||||||||||  |||||||||||||||||       ||||||||    
T  305688 aagtcttgtgttattcaatcaagattatttgtc------atttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtg 305595  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||||||||||||| ||| |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  305594 gtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtcttt 305495  T
Q  459 catgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||    
T  305494 catgaaaacatgagatttcttaggattgtttatttcttttaagattttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 165 - 510
Target Start/End: Complemental strand, 22552082 - 22551741
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||||||       ||    
T  22552082 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagt 22551983  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||| ||||||||||       ||||||||||||    
T  22551982 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtat 22551889  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||| |||||||||||||| |||||| || ||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  22551888 tcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatg 22551789  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||       |||||||||||||||||    
T  22551788 aaaacatgagatttcttatgattgttttttccttttaagattttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 164 - 510
Target Start/End: Original strand, 43847536 - 43847878
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||||| |||||||  ||||| ||||||||||||||||||||||| |||||||||||| | |||||||| ||| ||||||| ||||||       |    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaag 43847635  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    |||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||| |||    
T  43847636 tcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgta 43847729  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  43847730 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcat 43847829  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||       |||||||||||||||||    
T  43847830 gaaaacatgagatttcttaggattgtttttttcttttaagattttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 162 - 466
Target Start/End: Original strand, 1789330 - 1789630
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||||||||||||||||||||||||||  |||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||||| ||||||          
T  1789330 ggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaa 1789429  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || || || |||||||  || ||||||||||||||       |||||||||    
T  1789430 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtgg 1789523  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1789524 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 1789623  T
Q  460 atgaaaa 466  Q
    || ||||    
T  1789624 atcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 216 - 510
Target Start/End: Original strand, 20605178 - 20605468
Alignment:
Q  216 aaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngtttt 314  Q
    ||||||||||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||      |||| ||||||       || ||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtctt 20605271  T
Q  315 gtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgg 413  Q
    |||||||||||  |||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  20605272 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatgg 20605371  T
Q  414 attttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  20605372 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 166 - 486
Target Start/End: Original strand, 44765667 - 44765974
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||       |||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtc 44765766  T
Q  265 ttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaa-agactcttaatcacttnnnnnnngtctagtggtatt 363  Q
    |||||||||||||||||||||      |||| ||||||       || |||||||||||||   ||||||||||||||||       |||||||||||||    
T  44765767 ttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtatt 44765860  T
Q  364 caaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatga 463  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||         ||||||||    
T  44765861 caaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcatga 44765951  T
Q  464 aaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||    
T  44765952 aaacatgagatttcttaggattg 44765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 176 - 480
Target Start/End: Original strand, 32125152 - 32125455
Alignment:
Q  176 atcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttatt 274  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||       |||||||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttatt 32125251  T
Q  275 caatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaat---cacttnnnnnnngtctagtggtattcaaaatc 370  Q
    ||||||| |||      |||| ||||||       ||  ||||||||||||  ||||||||||||   || ||       ||| ||||||||||||||||    
T  32125252 caatcaaaatt------ctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatc 32125345  T
Q  371 attcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatg 470  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||    
T  32125346 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatg 32125445  T
Q  471 agatttctta 480  Q
    ||||||||||    
T  32125446 agatttctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 169 - 486
Target Start/End: Complemental strand, 5093352 - 5093049
Alignment:
Q  169 gtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttg 267  Q
    |||||||||||||||||||| |||||||||||||||          |||||  ||||||| ||||||||||||||||||| ||||||       ||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact----------gaaaatatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttg 5093263  T
Q  268 tgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaa 366  Q
    ||||||||||||||||||      |||| ||||||       || |||||||||||||  ||||| |||||||||||       ||||||| ||||||||    
T  5093262 tgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaa 5093169  T
Q  367 aatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaa 466  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5093168 aatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaa 5093069  T
Q  467 catgagatttcttaggattg 486  Q
    ||||||||||||||||||||    
T  5093068 catgagatttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 9120200 - 9120358
Alignment:
Q  352 tctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    ||||||| |||||||||||||||| ||||  ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||| |||    
T  9120200 tctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaa 9120299  T
Q  452 agtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    | |||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  9120300 aatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 28844444 - 28844756
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||           
T  28844444 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 28844543  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| |||||    
T  28844544 gtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggt 28844637  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| || || |||||||  | ||||||||||||||    
T  28844638 attcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttca 28844737  T
Q  461 tgaaaacatgagatttctt 479  Q
    | |||| ||||||||||||    
T  28844738 taaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 33135511 - 33135823
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||| || ||||||||||||||| ||| ||||||          
T  33135511 gggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaa 33135610  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     || ||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||    
T  33135611 agtattgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgg 33135704  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  33135705 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 33135804  T
Q  460 atgaaaacatgagatttctt 479  Q
    || |||| ||||||||||||    
T  33135805 at-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 164 - 285
Target Start/End: Original strand, 20605042 - 20605164
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||       |    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 20605141  T
Q  263 tcttgtgttattcaatcaagatt 285  Q
    |||||||||||||||||||||||    
T  20605142 tcttgtgttattcaatcaagatt 20605164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 9120057 - 9120180
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| ||||||           
T  9120057 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaaa 9120156  T
Q  262 gtcttgtgttattcaatcaagatt 285  Q
    ||||||||||||||||||||||||    
T  9120157 gtcttgtgttattcaatcaagatt 9120180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 10657479 - 10657607
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  10657479 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 10657578  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| |||| |||||||    
T  10657579 aagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 18177345 - 18177468
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||| || || ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||| || |||| ||||||||||||    
T  18177445 tttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 25288237 - 25288360
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| || || ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| ||||||||||||    
T  25288337 tttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 162 - 461
Target Start/End: Original strand, 26788672 - 26788969
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  26788672 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 26788771  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn--gtctagt 357  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| |          |||| ||    
T  26788772 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgt 26788865  T
Q  358 ggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    ||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||    
T  26788866 ggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 26788965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 163 - 418
Target Start/End: Complemental strand, 26601521 - 26601270
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||| |||||||||||| |||||||  |||||           
T  26601521 gggggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaa 26601422  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggt 360  Q
    || |||||||||| ||||||||       ||||| |||||        || |||| ||||||||  |||||||||||||||||       |||  |||||    
T  26601421 gttttgtgttatttaatcaaga------ctctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggt 26601328  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggatttt 418  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||  |||||||    
T  26601327 attcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 169 - 479
Target Start/End: Complemental strand, 28740598 - 28740302
Alignment:
Q  169 gtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttg 267  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||| ||| ||| ||| ||       ||||||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  268 tgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaa 366  Q
    || ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| |||||||||||    
T  28740498 tggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 28740405  T
Q  367 aatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaa 466  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||          || ||||||| || ||||||||||||||| ||||    
T  28740404 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgg----------tgtaattttaacaagaaaaagtctttcataaaaa 28740315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 368 - 479
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  368 atcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaac 467  Q
    ||||||||||||||||| |||||| ||||||||  |||||| ||||||||||||||||||| || || ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  468 atgagatttctt 479  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 162 - 420
Target Start/End: Original strand, 7026491 - 7026746
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaa-gtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||||||| ||||||||||||||| ||| ||||||         
T  7026491 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 7026590  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| |||    
T  7026591 aagtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtg 7026684  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  7026685 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 162 - 281
Target Start/End: Original strand, 378867 - 378987
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||          
T  378867 gggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 378966  T
Q  261 ngtcttgtgttattcaatcaa 281  Q
     |||||||| |||||||||||    
T  378967 agtcttgtggtattcaatcaa 378987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 360 - 486
Target Start/End: Complemental strand, 10125418 - 10125302
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||| ||||||||| ||||||||          || ||||||||||||||| || |||||||||| || |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    || |||||| ||||||||||| |||||    
T  10125328 ataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 479
Target Start/End: Complemental strand, 13833553 - 13833441
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||| |||||||||| ||||||||          |||||||||||||||||| || || ||||||| || ||||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 13833464  T
Q  457 ttcatgaaaacatgagatttctt 479  Q
    ||||||| || ||||||||||||    
T  13833463 ttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 19144913 - 19145004
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatt 253  Q
    ||||||||||||||  |||||||||| ||||||||||| | ||||||||||| |||||||||||| |||||||||||| |||| ||||||||    
T  19144913 gggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaatt 19145004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 215547 - 215425
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||          
T  215547 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 215448  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  215447 agtcttgtggtattcaatcaaga 215425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 3463559 - 3463652
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||| |||||||||| |||||||||   |||||||||||||||||| || |||||||| |||||| |||||||||||||||| ||| ||||||    
T  3463559 gggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaattt 3463652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 3463745 - 3463863
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||| |||||||||||| |||| ||||||||| ||||||||  |||||||||||||||||          || || ||||||| || ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 3463834  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 43078569 - 43078643
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaaga 43078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 3574920 - 3574978
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  3574920 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 351 - 409
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||| ||||||||||||||||||| | ||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 479
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  422 ggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 479  Q
    ||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 182 - 283
Target Start/End: Complemental strand, 10125594 - 10125492
Alignment:
Q  182 attctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatca 280  Q
    |||||||  |||||||||||| ||||| || |||||||||||| |||  |||||||||||||||||| ||||||       || ||||| ||||||||||    
T  10125594 attctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatca 10125495  T
Q  281 aga 283  Q
    |||    
T  10125494 aga 10125492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 3574765 - 3574817
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  3574765 attttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 3574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 13833743 - 13833622
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||   ||||||||||||  |||| || |||||||||| |||| |||||||||||||||| ||| ||| ||           
T  13833743 ggggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaa 13833644  T
Q  262 gtcttgtgttattcaatcaaga 283  Q
    |||||||| |||||||||||||    
T  13833643 gtcttgtggtattcaatcaaga 13833622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 43825085 - 43825145
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    |||||||||| |||||||||   |||||||||||| ||||| || ||||||||||||||||    
T  43825085 tgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtg 43825145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 14920666 - 14920619
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttat 211  Q
    ||||||||||||||  ||||| ||| ||||||||||||||||||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 21987316 - 21987366
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||||||||||||||||| ||||||||||  ||| ||||||||||||    
T  21987316 ggattttaaaagacttttttatgatgaaaaagttatgtagtattcaatcaa 21987366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 400
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaat 400  Q
    |||| ||||||||||||||||||||||||| |||| ||||| | ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 351 - 391
Target Start/End: Complemental strand, 215362 - 215322
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgt 391  Q
    |||| |||||||||||||||||||||| ||| |||||||||    
T  215362 gtctcgtggtattcaaaatcattcaaacttcaaaggattgt 215322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 193; Significance: 1e-104; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 21146954 - 21147274
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||          
T  21146954 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaa 21147053  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  21147054 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 21147147  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21147148 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 21147247  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||    
T  21147248 atgaaaacatgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 165 - 486
Target Start/End: Complemental strand, 33656359 - 33656040
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 33656260  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||||||| |||    || ||||||       || |||||||||||||  |||||||||||||||||        |||| ||||||    
T  33656259 cttgtgttattcaatcaagattcttt----ttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtat 33656164  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33656163 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 33656064  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    |||| |||||||||||||||||||    
T  33656063 aaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 165 - 510
Target Start/End: Complemental strand, 27459265 - 27458925
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||       ||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaagt 27459166  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||| ||||||      |||| ||||||       || |||| ||||||||  |||||||||||||||||       ||||||||||||    
T  27459165 cttgtgttattcaattaagatt------ctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtat 27459073  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||    
T  27459072 tcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatg 27458973  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||| ||||||||||||||       |||||||||||||||||    
T  27458972 aaaacatgatatttcttaggattgtttttttcttttaagattttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 32158217 - 32157869
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||           
T  32158217 gggggtatattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 32158118  T
Q  262 -gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtg 358  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  ||||| | |||||||||        ||||||||    
T  32158117 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtg 32158024  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa---agtc 455  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| | ||||||||||| |||||   ||||    
T  32158023 gtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtc 32157924  T
Q  456 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||  ||||       |||||||||||||||||    
T  32157923 tttcatgaaaacatgagatttcttaaaattgttcttttcttttaagattttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 327 - 510
Target Start/End: Complemental strand, 7016897 - 7016714
Alignment:
Q  327 aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggatt 426  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7016897 aagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatt 7016798  T
Q  427 ttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||       |||||||||||||||||    
T  7016797 ttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttacta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 193 - 480
Target Start/End: Original strand, 139191 - 139474
Alignment:
Q  193 ttttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttat 291  Q
    ||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||       || |||||||||||||||||||||          
T  139191 ttttaaaagacttttttataatgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagatt------ 139284  T
Q  292 ctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattg 390  Q
    |||| ||||||       ||  ||||||||||||  |||||| ||||||||||       ||||||||||||||||||||||||||||||||||||||||    
T  139285 ctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattg 139384  T
Q  391 tataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 480  Q
    | ||||||| |||||||||||||||||||| |||||||| | ||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  139385 tttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 351 - 480
Target Start/End: Complemental strand, 5273053 - 5272924
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5273053 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 5272954  T
Q  451 aagtctttcatgaaaacatgagatttctta 480  Q
    ||||||||||| ||||||||||||||||||    
T  5272953 aagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 165 - 452
Target Start/End: Original strand, 6460682 - 6460965
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||| ||| ||       ||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagt 6460781  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||| ||||||||||||||||||      |||| ||||||       ||  ||| ||||||||  |||||||||||||| ||        |||||||||||    
T  6460782 cttatgttattcaatcaagatt------ctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtat 6460875  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaa 452  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||    
T  6460876 tcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 313 - 466
Target Start/End: Original strand, 849180 - 849334
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  849180 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 849279  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaa 466  Q
     ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  849280 agattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 14000424 - 14000111
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  14000424 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 14000325  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
      ||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  14000324 aatcttgtggtattcaatcaagact------ctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 14000231  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  14000230 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 14000131  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  14000130 atgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 162 - 476
Target Start/End: Complemental strand, 4550576 - 4550266
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||          
T  4550576 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 4550477  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       |  ||| |||||||||  |||||| || |||||||       |||| ||||    
T  4550476 agtcttgtggtattcaatcaagact------ctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 4550383  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||| || || ||||||| || |||| ||||||||    
T  4550382 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttc 4550283  T
Q  460 atgaaaacatgagattt 476  Q
    ||||||| |||||||||    
T  4550282 atgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 161 - 486
Target Start/End: Complemental strand, 1152423 - 1152102
Alignment:
Q  161 tggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    |||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||| ||||||| |||| |||||||| | ||| ||| ||         
T  1152423 tgggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaa 1152324  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| |||    
T  1152323 aagtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtg 1152230  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||    
T  1152229 gtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 1152130  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
     ||||||| ||||||||||||| |||||    
T  1152129 tatgaaaagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 7017015 - 7016923
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7017015 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 7016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 13926003 - 13926131
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||| ||||| |||| |||||||    
T  13926103 aagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 39852417 - 39852545
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| || |||||  |||||||||||||||| ||||||||| || || ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 360 - 479
Target Start/End: Complemental strand, 7947698 - 7947579
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||||| || || ||||||| || |||||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttc 7947599  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| | ||||||||||    
T  7947598 atgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 43319133 - 43319218
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagac-ttttttatcatgaaaaagtcttgt-gtattcaatcaagactct 245  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  43319133 ggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 5273276 - 5273156
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatga-aaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||| |||||||||||||| ||||| ||||||       |||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtc 5273177  T
Q  265 ttgtgttattcaatcaagatt 285  Q
    |||||||||||||||||||||    
T  5273176 ttgtgttattcaatcaagatt 5273156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 351 - 486
Target Start/End: Original strand, 9689730 - 9689864
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||| ||||||||| |||||||||| |||||| | |||||| ||||||||||||||| |||| ||||||||  | ||||||||  ||||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaa 9689828  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| ||||||| |||||||||| |||||    
T  9689829 aagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 351 - 446
Target Start/End: Complemental strand, 14465361 - 14465266
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcat 446  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||| |||||||| | | ||||||||||    
T  14465361 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 168 - 420
Target Start/End: Complemental strand, 4240765 - 4240517
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||   |||||||||||||||||| || |||||||||| ||||| ||||||||||||||| ||| ||| ||        ||||    
T  4240765 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatctt 4240666  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||||||||    
T  4240665 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 4240572  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  4240571 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 5949185 - 5949298
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||          || || ||||||| || |||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 5949274  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| ||||||||||||    
T  5949275 tttcatgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 166 - 283
Target Start/End: Complemental strand, 16894174 - 16894057
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||| | ||||| ||||||       |||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagtc 16894076  T
Q  265 ttgtgttattcaatcaaga 283  Q
    ||||| |||||||||||||    
T  16894075 ttgtggtattcaatcaaga 16894057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 486
Target Start/End: Original strand, 22746369 - 22746496
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| ||||||||||||||||||||||||| |||||| ||||||||   ||||||||||||||||||||        ||| ||||||| || ||||    
T  22746369 gtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggg--------atgtaattttaacaagaaa 22746460  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    || ||||||||||||| || |||||||||| |||||    
T  22746461 aactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 9689553 - 9689633
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||||||||| |||||||||| ||||||||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagac-tttttattatgaaaaagtcttgtggtattcaatcaagactcttt 9689633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 168 - 409
Target Start/End: Original strand, 37013807 - 37014044
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| |||||||||   |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||       |||||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 37013906  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| |||||||||||||       ||||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| | ||||||||    
T  37013907 gtggtattcaatcaaga------ctctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattca 37014000  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    ||||||||||||||||||||| |||| ||||||||  |||||||    
T  37014001 aaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 360 - 420
Target Start/End: Complemental strand, 1461263 - 1461203
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 7948630 - 7948554
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||| | |||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagact 7948554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 360 - 479
Target Start/End: Complemental strand, 40013827 - 40013718
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| |||| |||  |||||| ||||||||||          || || ||||||| || |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtctttc 40013738  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  40013737 atgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 360 - 486
Target Start/End: Complemental strand, 9220832 - 9220716
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||| ||||||||| |||| ||| ||| ||||          | ||||||| || | |||||||| || |||||||||||||    
T  9220832 tattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttg----------taggattttatagtaaaattttaacacgaaaaagtctttc 9220743  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
     ||||||||||| ||||||||||||||    
T  9220742 gtgaaaacatgatatttcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 40014018 - 40013899
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | ||||||   ||||||||||||| ||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  40014018 gggggatgtattggattaggattctg--ggattttaaaaga-tttttaattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaa 40013922  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  40013921 agtcttgtggtattcaatcaaga 40013899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 245
Target Start/End: Complemental strand, 1511643 - 1511587
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactct 245  Q
    |||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||    
T  1511643 ggattttaaaagacatttttattatgaaaaagtcttgtggtgttcaatcaagactct 1511587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 228
Target Start/End: Original strand, 27786210 - 27786273
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    ||||||||||||| | ||||  || |||||||||||||||||||||| || |||||||||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtg 27786273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 22746185 - 22746304
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||  | ||||||||||||||||| || ||||||||||||||| |||||| || |||||| ||| ||| ||           
T  22746185 ggggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaa 22746284  T
Q  262 gtcttgtgttattcaatcaa 281  Q
    |||||||| |||||||||||    
T  22746285 gtcttgtggtattcaatcaa 22746304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 26795692 - 26795638
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||| |||||| ||||||||||||||||    
T  26795692 ggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 26795638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 26806756 - 26806702
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  26806756 ggattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagact 26806702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 172 - 243
Target Start/End: Original strand, 13925828 - 13925900
Alignment:
Q  172 ttggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||| | |||||||  ||||||||||||| ||||| || ||||||||||||||| ||||| ||||||||||    
T  13925828 ttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagact 13925900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 40410588 - 40410667
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||||||||||||||   ||||  ||||||||||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  40410588 gggggtgtattggattgagatttcaatggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 40410667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 246
Target Start/End: Original strand, 849166 - 849203
Alignment:
Q  210 atcatgaaaaagtcttgt-gtattcaatcaagactctt 246  Q
    |||||||||||||||||| |||||||||||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactctt 849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 5948996 - 5949118
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| ||| |||||| | |||||||  |||||||||||||| |||| || |||||||| | |||| |||||||||||| ||| ||| ||| ||          
T  5948996 gggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaaaaa 5949095  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  5949096 agtcttgtggtattcaatcaaga 5949118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 14465501 - 14465452
Alignment:
Q  206 ttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||||||||||||||| ||||||||| || ||||||| ||||||    
T  14465501 ttttatcatgaaaaagtcttgtggtattcaattaaaactctttccaattt 14465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 26806633 - 26806581
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||| ||||||| || || |||||||||||| ||||||||||||||||    
T  26806633 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 26806581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 28594529 - 28594449
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagac-ttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||| |||   |||| |||  ||||||||||||| |||||||| || |||||||||||| ||||||||||||||    
T  28594529 gggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaaga 28594449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 6197797 - 6197453
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| ||||||          
T  6197797 ggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaa 6197698  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  6197697 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 6197604  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6197603 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 6197504  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  6197503 atgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 163 - 485
Target Start/End: Complemental strand, 2301056 - 2300738
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||           
T  2301056 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 2300957  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  ||||||||| |||||||       ||||| ||||    
T  2300956 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggt 2300863  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2300862 attgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 2300763  T
Q  461 tgaaaacatgagatttcttaggatt 485  Q
    |||||||||||||||||||||||||    
T  2300762 tgaaaacatgagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 165 - 486
Target Start/End: Original strand, 1391513 - 1391830
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       ||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 1391612  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      | || ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||||    
T  1391613 cttgtgttattcaatcaagatt------cattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1391706  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1391707 tcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatg 1391806  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    ||||||||||||| ||||||||||    
T  1391807 aaaacatgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 29076483 - 29076805
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||         
T  29076483 ggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaata 29076582  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaa-agactcttaatcacttnnnnnnn-gtctagt 357  Q
      ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||   ||| ||||||||||||        |||||||    
T  29076583 aagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagt 29076676  T
Q  358 ggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  29076677 agtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctt 29076776  T
Q  458 tcatgaaaacatgagatttcttaggattg 486  Q
    |||| |||||||||||||| |||||||||    
T  29076777 tcataaaaacatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 29111456 - 29111779
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||         
T  29111456 ggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaata 29111555  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaa-agactcttaatcacttnnnnnnn--gtctag 356  Q
      ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||   ||| ||||||||||||         ||||||    
T  29111556 aagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctag 29111649  T
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||    
T  29111650 tagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatct 29111749  T
Q  457 ttcatgaaaacatgagatttcttaggattg 486  Q
    ||||| |||||||||||||| |||||||||    
T  29111750 ttcataaaaacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 192 - 510
Target Start/End: Original strand, 28002581 - 28002895
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattattta 290  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||||       ||||||| |||||||||||||||| |||     
T  28002581 attttaaaagacttttttataatgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttg 28002680  T
Q  291 tctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggatt 389  Q
    ||      ||||       || || ||||||||||  |||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||    
T  28002681 tc------atttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggatt 28002774  T
Q  390 gtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnn 489  Q
    || |||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||||       
T  28002775 gtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgttt 28002874  T
Q  490 nnnncttttaagattttacta 510  Q
        |||||||||||||||||    
T  28002875 ttttcttttaagattttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 7051732 - 7052051
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||| || ||| | ||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||           
T  7051732 gggggtgtgtttgattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaa 7051831  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||| | |||||||||      |||| ||||||       || ||||||||| |||  ||||||||| |||||||       |||  ||| |    
T  7051832 gtcttgtggtatacgatcaagatt------ctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgat 7051925  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||| |||||||||| | |||||||||||||||||||| |||||    
T  7051926 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttca 7052025  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    | ||| ||||||||||||||| ||||    
T  7052026 taaaatcatgagatttcttagaattg 7052051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 31895582 - 31895895
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  31895582 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 31895681  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || |||  ||||||||  |||||| || |||| ||       |||| ||||    
T  31895682 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 31895775  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||| || ||||||| || |||||||||||||    
T  31895776 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttc 31895875  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  31895876 atgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 34773296 - 34773608
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||| ||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  34773296 ggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 34773395  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||        ||| |||||    
T  34773396 gtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggt 34773489  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||  | || ||||||| || ||||||||||||||    
T  34773490 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttca 34773589  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  34773590 tgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 14262752 - 14262439
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||| ||||||| ||||||||||||| | ||| ||| ||          
T  14262752 gggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaa 14262653  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||| | || |||| ||       |||| ||||    
T  14262652 agtcttgtggtattcaatcaagact------ctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtgg 14262559  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  14262558 tattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 14262459  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||| ||||||||    
T  14262458 atgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 34759184 - 34759056
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  34759184 gtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 34759085  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||||||||||| ||||||||||||    
T  34759084 aaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 7497147 - 7497274
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||| ||||||| || || ||||||| || ||||    
T  7497147 gtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgt-ggattttgtagtgtaattttaacaagaaa 7497245  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  7497246 aagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 31067569 - 31067682
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||| || || ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    |||||| |||| ||||||||||||    
T  31067659 tttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 30385191 - 30385075
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||| || || ||||||| ||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--aca 30385104  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  30385103 aagtctttcatgaaaagatgagatttctt 30385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  371 attcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatg 470  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||||||          || || ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 437 - 486
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  437 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  445 atgaaaaagtctttcatgaaaacatgagatttcttaggatt 485  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 5957151 - 5957205
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||||| || ||||||||||||||||    
T  5957151 ggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagact 5957205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 7100189 - 7100243
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  7100189 ggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 7100243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 8794441 - 8794387
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  8794441 ggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 8794387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 31609779 - 31609697
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||| || | | ||  |||||||||||||||||||||| || || ||||| |||||| ||||||||||||||||    
T  31609779 ggggggtgtattgaatgaagttttcaatggattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagact 31609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 254
Target Start/End: Original strand, 656879 - 656944
Alignment:
Q  191 gattttaaaagacttttttatcat-gaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||||||||||||||||||||||  ||||| |||| | |||||||||||| ||||||||||||||    
T  656879 gattttaaaagacttttttatcataaaaaaaatcttatggtattcaatcaatactcttttcaattt 656944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 380
Target Start/End: Original strand, 656997 - 657065
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaattt 380  Q
    |||||||||||||  |||||||||||||||||       |||||||||||||| |||||||||||||||    
T  656997 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaattt 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 708940 - 708990
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||||||||||||||||| |||||||| ||| || ||||||||||||    
T  708940 ggattttaaaagacttttttataatgaaaaaatctagtggtattcaatcaa 708990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 393 - 451
Target Start/End: Original strand, 657067 - 657122
Alignment:
Q  393 taataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    ||||||||| |||| |||||||||||||||||||   || |||||||||| ||||||||    
T  657067 taataaatctgattctgatggattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 400
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaat 400  Q
    |||||||||||||||||| |||||| ||| |||||| ||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 164 - 510
Target Start/End: Complemental strand, 49198585 - 49198245
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa-g 49198487  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaaagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||||||||      |||| ||||||       |||||||||||||||| |||||||||||||||||       ||  ||||||||    
T  49198486 tcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagttttgtggtattcaataagactcttaatcacttaaaaaaagttcagtggtat 49198393  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49198392 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 49198293  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||| ||||||||||||||       |||||||||||||||||    
T  49198292 aaaacatgatatttcttaggattgtttttttcttttaagattttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 162 - 510
Target Start/End: Original strand, 21222028 - 21222371
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||          
T  21222028 ggggggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa 21222127  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     || |||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||| ||    
T  21222128 agt-ttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagagg 21222220  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  21222221 tattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttc 21222320  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  21222321 atgaaaacatgagatttcttaggattgttattttcttttaagattttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 45760330 - 45759985
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||          
T  45760330 ggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaa 45760231  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||||||||||||||||||| ||| ||      ||||       ||  ||||||||||||  |||||||||||||||||       |||||||||    
T  45760230 agtcttgtgttattcaatcaagattctttgtca-----atttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 45760136  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||     
T  45760135 tattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttg 45760036  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  45760035 atgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 28824691 - 28824349
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||           
T  28824691 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaa 28824592  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||||||||||||||||||||||| ||      ||||       || |||||||||||||  |||||||||||||||||       |||| |||||    
T  28824591 gtcttgtgttattcaatcaagattatttgtc------atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggt 28824498  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||| |    
T  28824497 attcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtctttta 28824399  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    | ||||||||||||||||||||||||       |||||||||||||||||    
T  28824398 taaaaacatgagatttcttaggattgtttttttcttttaagattttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 164 - 486
Target Start/End: Original strand, 35279554 - 35279872
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       |    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 35279653  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
     ||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||| ||||||||||       |||||||||||    
T  35279654 acttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggta 35279747  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||    
T  35279748 ttcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcat 35279847  T
Q  462 gaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||| ||||    
T  35279848 gaaaacatgagatttcttagaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 163 - 486
Target Start/End: Complemental strand, 6304573 - 6304252
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||| ||||||           
T  6304573 gggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaa 6304474  T
Q  262 -gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa--aaagactcttaatcacttnnnnnnngtctagtg 358  Q
     ||  ||||||||||||||||||||      |||| ||||||       || |||||||||||||  ||| ||||||||||||||       ||||||||    
T  6304473 agtactgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtg 6304380  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6304379 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 6304280  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||| |||||||| |||||    
T  6304279 catgaaaacatgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 50192871 - 50192526
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||          
T  50192871 ggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaaa 50192772  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtg 358  Q
      |||||||||||||||||||||||      | || ||||||       || |||||||||||||  |||||||||||||||||        ||||||||    
T  50192771 aatcttgtgttattcaatcaagatt------ccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtg 50192678  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50192677 gtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 50192578  T
Q  459 catgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||||||       |||||||||||||||||    
T  50192577 catgaaaacatgagattttttaggattgtttttttcttttaagattttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 163 - 481
Target Start/End: Original strand, 49417965 - 49418279
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||           
T  49417965 gggggtatattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaa 49418064  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      | || ||||||        || ||||||||||||  |||||||||||||||||       ||||||||||    
T  49418065 gtcttgtgttattcaatcaagatt------cattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggt 49418158  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  49418159 attcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttca 49418258  T
Q  461 tgaaaacatgagatttcttag 481  Q
    |||||| ||||||||||||||    
T  49418259 tgaaaatatgagatttcttag 49418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 167 - 510
Target Start/End: Complemental strand, 47654669 - 47654327
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||       |||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtc 47654570  T
Q  265 tt-gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtggta 361  Q
    || |||||||||||||||||||      |||| ||||||       || |||||||||||||  || ||||||||||||||        |||||||||||    
T  47654569 tttgtgttattcaatcaagatt------ctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggta 47654476  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||||    
T  47654475 ttcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcat 47654376  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||       |||||||||||||||||    
T  47654375 gaaaacatgagatttcttaggattgtttttttcttttaagattttacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 165 - 486
Target Start/End: Complemental strand, 35679445 - 35679128
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||       ||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagt 35679346  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||| |||||||||||||||      |||| ||||||        | |||| ||||||||  |||||||||||||||||       |||  |||||||    
T  35679345 cttgtggtattcaatcaagatt------ctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtat 35679252  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  35679251 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatg 35679152  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    || ||||||||||||||| |||||    
T  35679151 aagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 216 - 510
Target Start/End: Complemental strand, 19452074 - 19451784
Alignment:
Q  216 aaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngtttt 314  Q
    ||||||||||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||      |||| ||||||       || ||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtctt 19451981  T
Q  315 gtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgg 413  Q
    |||||||| ||  |||||||||||||||||       |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  19451980 gtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatgg 19451881  T
Q  414 attttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  19451880 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 162 - 451
Target Start/End: Original strand, 730029 - 730314
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||          
T  730029 ggggggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 730127  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtg 358  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||        ||||||||    
T  730128 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtg 730221  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  730222 gtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 180 - 486
Target Start/End: Original strand, 29556006 - 29556305
Alignment:
Q  180 tgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaat 278  Q
    ||||||||| ||||||||||||||||||||||    ||||||| ||||| ||||||||||||||||||||||||||       |||||||||||||||||    
T  29556006 tgattctaagggattttaaaagacttttttat----aaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaat 29556101  T
Q  279 caagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 377  Q
     ||||||      | || | ||||       || ||||| |||||||  |||||||||||||||||        ||||||| ||||||||||||||||||    
T  29556102 taagatt------cattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaa 29556195  T
Q  378 tttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa-acatgagattt 476  Q
    ||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||    
T  29556196 tttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagattt 29556295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 229 - 486
Target Start/End: Original strand, 45535892 - 45536150
Alignment:
Q  229 tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-a 327  Q
    ||||||||||||||||||| ||||||       |||||||||||||||||||| |||      |||| ||||||       || |||||||||||||  |    
T  45535892 tattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatatt------ctttgtcatttaaacaaagtgttgtggtattcaatca 45535985  T
Q  328 agactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattt 427  Q
    |||||||||||| |||       |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  45535986 agactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattt 45536085  T
Q  428 tctaatgaaattttagcatgaaaaagtctttcat------gaaaacatgagatttcttaggattg 486  Q
    |||| |||||||||||||||||||||||||||||      |||||||||||||||||||||||||    
T  45536086 tctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattg 45536150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 216 - 510
Target Start/End: Original strand, 47780644 - 47780935
Alignment:
Q  216 aaaaagtcttgtgt-attcaatcaagactcttttcaatttnnnnnnn-gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttt 313  Q
    |||||||||||||| |||||||||||||||||||||||||        |||||||||||||||||||||||||| | ||      ||||       ||      
T  47780644 aaaaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtc------atttaaaaaaagtca 47780737  T
Q  314 tgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatg 412  Q
    ||||||||||||  |||||||||||||||||       |||||||| |||||||||||||||||| ||  ||||||||| ||||||||||||||||||||    
T  47780738 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatg 47780837  T
Q  413 gattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||| |||||       |||||||||||||||||    
T  47780838 gattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 162 - 476
Target Start/End: Complemental strand, 32589274 - 32588963
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa-tttnnnnn 259  Q
    ||||| |||||||||| |||||||||   |||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||| |||         
T  32589274 gggggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaaaaa 32589175  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
       |||| || ||||||||||||| |      ||||||||||         | |||||| ||||||  ||||||||| |||||||       |||| |||    
T  32589174 aaatcttctggtattcaatcaagact------ctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtg 32589081  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||    
T  32589080 gtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtcttt 32588981  T
Q  459 catgaaaacatgagattt 476  Q
    ||||||||||||||||||    
T  32588980 catgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 356 - 509
Target Start/End: Complemental strand, 31572327 - 31572174
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  456 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttact 509  Q
    |||||||||| ||||||||||||||| ||||       ||||||||||||||||    
T  31572227 tttcatgaaatcatgagatttcttagaattgtttttttcttttaagattttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 33025392 - 33025703
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||| ||||||| ||||||||||| |   ||| ||||||          
T  33025392 ggggggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaa 33025491  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa--aaagactcttaatcacttnnnnnnngtctagtg 358  Q
     || |||| ||||||||||||||||      ||||  |||||        | |||||||||||||  ||| ||||||||||||||       |||| |||    
T  33025492 agttttgtcttattcaatcaagatt------ctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtg 33025585  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||||||||||||| |||||||||| ||||| ||||||||          ||||||||||||||||| ||||||||||||||||||||||||    
T  33025586 gtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaaaagtcttt 33025675  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||| |||||    
T  33025676 catgaaaacatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 6312454 - 6312767
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  6312454 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 6312553  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     || ||||| |||||||| |||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  6312554 agttttgtggtattcaattaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 6312647  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  6312648 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 6312747  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  6312748 atgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 163 - 479
Target Start/End: Complemental strand, 29396707 - 29396395
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||  | ||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  29396707 ggggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29396608  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
     |||| || ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| |||||    
T  29396607 atcttttggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggt 29396514  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||||    
T  29396513 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 29396414  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  29396413 tgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 351 - 486
Target Start/End: Complemental strand, 9577567 - 9577432
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| ||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||||| ||||||||| ||||||||||| ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    || |||||||||||||||||||||||||| ||||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 170 - 457
Target Start/End: Original strand, 48524208 - 48524490
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgt 268  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||| ||||||| |||  |||||||||||||||||||| ||||||       |||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt-atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  269 gttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaa 367  Q
    ||||||||||||||||| ||| ||      ||||        |  ||||||||| ||  || ||||||||||||||       |||| ||| ||||||||    
T  48524307 gttattcaatcaagattttttgtc------atttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaa 48524400  T
Q  368 atcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    ||||||||||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48524401 atcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 25612037 - 25612350
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||| ||||||| ||||||||||||||| ||| ||||||          
T  25612037 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaa 25612136  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||| | || |||| ||       |||| ||||    
T  25612137 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtgg 25612230  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || |  ||||||| || |||||||||||||    
T  25612231 tattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttc 25612330  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  25612331 atgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 953700 - 953823
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||           
T  953700 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 953799  T
Q  262 gtcttgtgttattcaatcaagatt 285  Q
    ||||||||||||||||||||||||    
T  953800 gtcttgtgttattcaatcaagatt 953823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 351 - 476
Target Start/End: Original strand, 51701645 - 51701770
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  51701645 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 51701744  T
Q  451 aagtctttcatgaaaacatgagattt 476  Q
    |||||||||||||||| |||||||||    
T  51701745 aagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 48177597 - 48177469
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  48177497 aagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 168 - 479
Target Start/End: Complemental strand, 15835367 - 15835060
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||       |||||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 15835268  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  ||||||  | |||| ||        ||| ||||||||||    
T  15835267 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattca 15835174  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||||||||| | ||||||||| ||||||||  |||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||    
T  15835173 aaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 15835074  T
Q  466 acatgagatttctt 479  Q
    | ||||||||||||    
T  15835073 agatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 22183250 - 22183374
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||          
T  22183250 ggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 22183349  T
Q  261 ngtcttgtgttattcaatcaagatt 285  Q
     || |||||||||||||||||||||    
T  22183350 agttttgtgttattcaatcaagatt 22183374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 171 - 478
Target Start/End: Original strand, 46327931 - 46328234
Alignment:
Q  171 attggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtgt-attcaatcaagactcttttcaatttnnnnnnngtcttgtg 269  Q
    ||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||||| |||||||||| ||| ||| ||| ||       ||||||||    
T  46327931 attggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtg 46328030  T
Q  270 ttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaa 368  Q
     ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| |||||||||||||    
T  46328031 gtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaa 46328124  T
Q  369 tcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaaca 468  Q
    ||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||||| |||| |    
T  46328125 tcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaaga 46328224  T
Q  469 tgagatttct 478  Q
    | ||||||||    
T  46328225 taagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 486
Target Start/End: Complemental strand, 37014775 - 37014640
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| |||||||||||||||||||||| || |||||| | ||||||   ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  37014775 gtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaa 37014676  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||| |||| |||||||||||||||||| |||||    
T  37014675 aagtctctcataaaaacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 19452170 - 19452048
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||          
T  19452170 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 19452071  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  19452070 agtcttgtggtattcaatcaaga 19452048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 170 - 479
Target Start/End: Complemental strand, 28387705 - 28387400
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgt 268  Q
    |||||||| | |||||||  ||||||||||||||||||| || ||||||||||||| || ||||||||||||||| ||| ||||||       ||||| |    
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtctttt 28387606  T
Q  269 gttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaa 367  Q
    | |||||||||||||||      |||| ||||||       || ||| |||||||||  |||||| || |||| ||        ||| ||||||||||||    
T  28387605 ggtattcaatcaagatt------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaa 28387512  T
Q  368 atcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaac 467  Q
     ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || |  ||||||| ||  |||||||||||||| ||||     
T  28387511 ttcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaag 28387412  T
Q  468 atgagatttctt 479  Q
    ||||||||||||    
T  28387411 atgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 9322630 - 9322507
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||   ||||||||||||||| ||||||||| || || ||||||| || |||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| ||||||||||||    
T  9322530 tttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 14494092 - 14494213
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||          
T  14494092 ggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 14494188  T
Q  261 ngtcttgtgttattcaatcaagatt 285  Q
     ||||||||||||||||||||||||    
T  14494189 agtcttgtgttattcaatcaagatt 14494213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 165 - 254
Target Start/End: Original strand, 47780502 - 47780592
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 418
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggatttt 418  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 9322820 - 9322727
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||||||    
T  9322820 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaattt 9322727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 38536224 - 38536106
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||          || || ||||||| || ||||    
T  38536224 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38536135  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  38536134 aagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 38558442 - 38558324
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||          || || ||||||| || ||||    
T  38558442 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 38558353  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  38558352 aagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 356 - 486
Target Start/End: Complemental strand, 48668905 - 48668785
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||          |||||||||||||||| | || || ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  456 tttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| ||||||||| || ||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattg 48668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 162 - 400
Target Start/End: Original strand, 49230766 - 49231000
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||| ||  ||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| ||| ||| ||          
T  49230766 gggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaa 49230865  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||       ||||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||    
T  49230866 agtcttgtggtattcaatcaaga------ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 49230959  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaat 400  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  49230960 tattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 29219351 - 29219469
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||  |||||||||||||||||| |          || ||||||| || ||||    
T  29219351 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtag----------tgtaattttaacaagaaa 29219440  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| ||||||||||||    
T  29219441 aagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 31572470 - 31572417
Alignment:
Q  175 gatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtg 31572417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 162 - 420
Target Start/End: Original strand, 29219168 - 29219420
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||| ||  | ||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||          
T  29219168 gggggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 29219267  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||        || | ||||||       || ||| | |||||||  |||||| || |||||||       |||| ||||    
T  29219268 agtcttgtggtattcaatcaaga--------ctctgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 29219359  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    ||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||    
T  29219360 tattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgt 29219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 442
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaatttta 442  Q
    |||| |||||||||||||| |||||||||| |||||||| |  |||||||  |||||||||| ||||||||| |||||||  ||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 8141448 - 8141366
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||| ||||||| || | |||||||  ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  8141448 gggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 8141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 18798556 - 18798614
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  18798556 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 9577751 - 9577670
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | ||||| || ||||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  9577751 ggggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagact 9577670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 28541385 - 28541437
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatg 215  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  28541385 gggggtgtattggatcatgattctaagcgattttaaaagatttttttatcatg 28541437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 19007638 - 19007584
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||| |||||||||||| || ||||||||||||||||    
T  19007638 ggattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagact 19007584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 475
Target Start/End: Complemental strand, 5495231 - 5495117
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||| ||||||| ||||||| | ||||||||          |||||||||||||||||| || || ||||||| || ||||    
T  5495231 gtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 5495142  T
Q  451 aagtctttcatgaaaacatgagatt 475  Q
    ||||| || ||||||| ||||||||    
T  5495141 aagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 18798400 - 18798493
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||||||||| ||| ||| ||       |||||||| |||||||||||||    
T  18798400 gattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 18798493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 449 - 509
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  449 aaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttact 509  Q
    |||||||||||||||||||||||||||| |||||||||       ||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 359 - 409
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    ||||||||||||||||||||||| || |||||| ||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 38536339 - 38536281
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||||||||||||  | || |||||||||||| ||||||||||||||||||||    
T  38536339 ggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactcttt 38536281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 38558557 - 38558499
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||||||||||||  | || |||||||||||| ||||||||||||||||||||    
T  38558557 ggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactcttt 38558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 42290732 - 42290802
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||| | |||||||  ||||||||||||| ||||| || ||||||||||||||| ||||||||||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 42290802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 42657711 - 42657793
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||||   ||||  ||  |||||||||||||||||| || || |||||||||||| ||||||||||||||||    
T  42657711 ggggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagact 42657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 48194615 - 48194669
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  48194615 ggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 48194669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 48203373 - 48203427
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  48203373 ggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 48203427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 175 - 243
Target Start/End: Complemental strand, 25831213 - 25831144
Alignment:
Q  175 gatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||| | ||||||||||||||||| || |||||||| |||| || |||||||| ||||||    
T  25831213 gatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagact 25831144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 45272468 - 45272549
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||| | |||| ||||||||| ||||||    
T  45272468 ggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagact 45272549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 5495410 - 5495326
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    |||||||||| | |||||||   |||||||||| ||||||| || ||||||||||| ||| |||||||||||||||| ||| |||    
T  5495410 tgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaa 5495326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 422 - 478
Target Start/End: Original strand, 18798607 - 18798663
Alignment:
Q  422 ggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 478  Q
    ||||||| || || ||||||| || |||||||||||||||||||| |||||||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 48177776 - 48177692
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    |||||||||| | |||||||  |||||||||||   ||||| || ||||||||||||||| |||||||||||||||| ||| |||    
T  48177776 tgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 48177692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 478
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  376 aatttcgaaggattgtataataaatcagattttgatggattttgt-gggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagat 474  Q
    ||||| ||| |||||| || |||||  ||||||||| |||||||| ||| |||| || |||| ||||||||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  475 ttct 478  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 14555370 - 14555316
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||| | || ||||||||||||||||    
T  14555370 ggattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagact 14555316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 452
Target Start/End: Original strand, 47784451 - 47784542
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||| ||||||| ||| || |||||| ||||||||          ||||||||||| ||||||||| | ||||||||||||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat----------tggattttgtgagattttctagttaaattttagcatgaaa 47784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 51826895 - 51826841
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||||||| || || ||||| |||||| ||||||||||||||||    
T  51826895 ggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagact 51826841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 102)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 996404 - 996062
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||            
T  996404 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaa 996306  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||||||||||       || |||||||||||||  |||| ||||||||||||       ||||||||||    
T  996305 gtcttgtgttattcaatcaagatt------ctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggt 996212  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  996211 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 996112  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  996111 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 10139465 - 10139122
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  10139465 gggggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 10139366  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      | |||||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  10139365 gtcttgtgttattcaatcaagatt------ccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 10139272  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10139271 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 10139172  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  10139171 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 19253714 - 19254033
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  19253714 gggggtttattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 19253813  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  19253814 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 19253907  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19253908 attcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 19254007  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||||    
T  19254008 tgaaaacatgagatttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 162 - 510
Target Start/End: Original strand, 20498096 - 20498439
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||          
T  20498096 ggggggtgtattggatcatgattctaagggattttaaaagacttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 20498194  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     || |||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  20498195 agttttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 20498288  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20498289 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 20498388  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  20498389 atgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 164 - 510
Target Start/End: Complemental strand, 3206514 - 3206181
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaag 3206415  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    ||||||| ||||||||||||||| ||||                   || |||||||||||||  |||||||||||||||||       |||||||||||    
T  3206414 tcttgtggtattcaatcaagattcttta---------------aaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 3206330  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  3206329 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 3206230  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||| |||||       |||||||||||||||||    
T  3206229 gaaaacatgagatttcttatgattgtttttttcttttaagattttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 165 - 510
Target Start/End: Complemental strand, 37820794 - 37820453
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       ||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 37820695  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||        | |||||||||||||  |||| ||||||||||||       ||||||||||||    
T  37820694 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtat 37820601  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||     
T  37820600 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcata 37820501  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||       |||||||||||||||||    
T  37820500 aaaacatgagatttcttaagattgtttttttcttttaagattttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 163 - 486
Target Start/End: Complemental strand, 33808121 - 33807798
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg----tattcaatcaagactcttttcaatttnnnn 258  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||    ||||||||||| | ||||||||||||        
T  33808121 gggggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaa 33808022  T
Q  259 nnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctag 356  Q
       ||||||||||||||||| ||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||        ||||||    
T  33808021 aaagtcttgtgttattcaattaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctag 33807928  T
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33807927 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 33807828  T
Q  457 ttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||||||||    
T  33807827 ttcatgaaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 163 - 510
Target Start/End: Original strand, 35337621 - 35337963
Alignment:
Q  163 gggggtgtattgga-tcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||          
T  35337621 gggggtgtatttgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 35337720  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      | || ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  35337721 agtcttgtgttattcaatcaagatt------ccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 35337814  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  35337815 tattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttc 35337913  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||| |||||||||       |||||||||||||||||    
T  35337914 atgaaaacatgagattt-ttaggattgtttttttcttttaagattttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 6589450 - 6589770
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||| ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  |||||          
T  6589450 ggggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaa 6589549  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||||||||||||||| |||      | || ||||||       || |||||||||||||  |||||||||||||| ||       |||||||||    
T  6589550 agtcttgtgttattcaatcaatatt------ccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtgg 6589643  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6589644 tattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 6589743  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||    
T  6589744 atgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 40246730 - 40247050
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||    |||          
T  40246730 ggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaaa 40246829  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
      |||||||||||||||||||||||      |||| ||||||       ||||||||||||||||  |||||| ||||||| ||       |||||||||    
T  40246830 aatcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtgg 40246923  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  40246924 tattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttc 40247023  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||| |||| |||||    
T  40247024 atgaaaacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 163 - 486
Target Start/End: Complemental strand, 29449179 - 29448858
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||||| ||| ||           
T  29449179 gggggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaa 29449080  T
Q  262 --gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      ||||||||||||||||||||||||      | || ||||||       || ||||| |||||||  |||||||| ||||||||       ||||||||    
T  29449079 aagtcttgtgttattcaatcaagatt------ccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtg 29448986  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  29448985 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtcttt 29448886  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||||||    
T  29448885 catgaaaacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 185 - 486
Target Start/End: Complemental strand, 44762334 - 44762037
Alignment:
Q  185 ctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T
Q  284 ttatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcg 382  Q
    ||      |||| ||||||       ||  ||| ||||||||  |||||||||||||||||       ||||||||||||| ||||| |||||| |||||    
T  44762234 tt------ctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcg 44762141  T
Q  383 aaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagg 482  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  44762140 aaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaag 44762041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 165 - 486
Target Start/End: Original strand, 54625481 - 54625798
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||||||||   | |||| |||||||||||||||||||| ||||||       ||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagt 54625580  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||| |||      | || ||||||        | |||| ||||||||  |||||||||||||||||       ||||||||||||    
T  54625581 cttgtgttattcaatcaatatt------cgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 54625674  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  54625675 tcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatg 54625774  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||| |||||    
T  54625775 aaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 25418253 - 25418572
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||| |||||||||||||||||||  |||||||||| | ||||||||||||||||  | ||||| ||||||||||| ||||||| || |||           
T  25418253 gggggtttattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaa 25418352  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||| ||||||||||        ||||| |||    
T  25418353 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggt 25418446  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  25418447 attcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttca 25418546  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||| ||||||||||    
T  25418547 tgaaaacatgagattccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 163 - 471
Target Start/End: Complemental strand, 51699798 - 51699495
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||| |||  |||||||||||| |||||||||| |||||| | ||||| ||||||||||||||||||||||||||           
T  51699798 gggggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaa 51699699  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||| ||||||||||||||||      |||| ||||||        | |||||||||||||  |||||||||||||||||        |||||||||    
T  51699698 gtcttgtattattcaatcaagatt------ctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggt 51699606  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||  |||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||     
T  51699605 attcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcg 51699506  T
Q  461 tgaaaacatga 471  Q
    |||||||||||    
T  51699505 tgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 3999819 - 3999645
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3999819 ttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 3999720  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  3999719 ggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 1139681 - 1139539
Alignment:
Q  19 atcttcattgtcatttgggattctcttttgaattttaagatcattttattcatatcacaaataattaaacctaaccttgcattgatgcaatgatatataa 118  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1139681 atcttcattgtcatttgagattttcttttgaattttaagattattttattcatatcacaaataattaaacctaaccttgcattgatgcaataatatataa 1139582  T
Q  119 ctttatcgacaactttaacacctttggtttagtttagaagagt 161  Q
     ||||||||||| ||||||||||||||||||||||||||||||    
T  1139581 atttatcgacaattttaacacctttggtttagtttagaagagt 1139539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 164 - 485
Target Start/End: Original strand, 52114418 - 52114734
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||| |||||||||||||||| | ||||||||||| ||||||||||||| ||||||||||| |||||||||||  || ||||||||||            
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaaaaaaaa 52114515  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtggt 360  Q
    ||||||||||||||| |||||||      |||| ||||||       || |||||||||||||  |||||| ||||||||||        ||||||||||    
T  52114516 tcttgtgttattcaaccaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggt 52114609  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||| |||||      
T  52114610 attcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttg 52114709  T
Q  461 tgaaaacatgagatttcttaggatt 485  Q
    |||||||||||||||||||||||||    
T  52114710 tgaaaacatgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 168 - 478
Target Start/End: Original strand, 29029898 - 29030203
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||| ||  ||||        |||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagtctt 29029997  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    |||||||||||| |||| |      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||| ||||||||||    
T  29029998 gtgttattcaattaagact------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattca 29030090  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    | ||| ||||||    
T  29030091 aaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaa 29030190  T
Q  466 acatgagatttct 478  Q
    |||||||||||||    
T  29030191 acatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 313 - 480
Target Start/End: Complemental strand, 33996715 - 33996547
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||        || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33996715 ttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 33996616  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 480  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||    
T  33996615 ggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 163 - 431
Target Start/End: Complemental strand, 1440270 - 1440007
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||| ||||||||||||  |||||||||| ||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||           
T  1440270 ggggatgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaa- 1440173  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnn-gttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
    ||||||||||||||||||||||||      |||| ||||||        ||||||||||||||||  |||||||||||||||||       |||||||||    
T  1440172 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 1440079  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttcta 431  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  1440078 tattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggattttcta 1440007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 36674450 - 36674137
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  36674450 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 36674351  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  36674350 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 36674257  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  36674256 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 36674157  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  36674156 atgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 53929302 - 53929128
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       ||||||||||||||||||||||| |||| ||||| |||||| |||||||| ||||||||||    
T  53929302 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgat 53929203  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||| |||||||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  53929202 ggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 351 - 486
Target Start/End: Complemental strand, 6035188 - 6035053
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| |||||||||||||||||||||||||| | ||| |||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||    
T  6035188 gtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 6035089  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| |||||||||||||||||| |||||    
T  6035088 aagtctttcataaaaacatgagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 161 - 479
Target Start/End: Original strand, 11431411 - 11431725
Alignment:
Q  161 tggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    |||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||         
T  11431411 tgggggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 11431510  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      |||||||| |||||||| |||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| |||    
T  11431511 aagtcttgtggtattcaataaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtg 11431604  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||| ||||||||||||||||| ||||||||  ||||||| |||||||||||||||||| || || ||||||| || ||||||||||||    
T  11431605 gtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttt 11431704  T
Q  459 catgaaaacatgagatttctt 479  Q
    |||||||| ||||||||||||    
T  11431705 catgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 357 - 486
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  ||||||||| |||||||||||||||| || ||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  457 ttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||| |||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 479
Target Start/End: Complemental strand, 44906825 - 44906520
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgt 268  Q
    |||||||| | |||||||   |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||       |||||||    
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgt 44906726  T
Q  269 gttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaa 367  Q
    | ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||||||||||    
T  44906725 ggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 44906632  T
Q  368 atcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaac 467  Q
    |||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| || || ||||||| || ||||| ||||||||||||||     
T  44906631 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaag 44906532  T
Q  468 atgagatttctt 479  Q
    ||||||||||||    
T  44906531 atgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 18749683 - 18749811
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  18749783 aagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 164 - 451
Target Start/End: Original strand, 22057651 - 22057933
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |||||||||     ||||| ||||||           
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaa 22057747  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngtt-ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
    ||||||||||||||||||||||||      |||| ||||||           ||||||||||| |  ||||||||| |||||||        ||||||||    
T  22057748 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtgg 22057841  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  22057842 tatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 357 - 479
Target Start/End: Original strand, 40897221 - 40897343
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||    
T  40897221 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtct 40897320  T
Q  457 ttcatgaaaacatgagatttctt 479  Q
    |||||||||| ||||||||||||    
T  40897321 ttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 398 - 486
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  398 aatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 32580247 - 32580375
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||||| || || ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 34484160 - 34484037
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| ||||||||||||    
T  34484060 tttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 17946359 - 17946487
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| |||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  17946359 gtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 17946458  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  17946459 aagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 356 - 479
Target Start/End: Original strand, 54628920 - 54629043
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    |||||| |||| ||||||||||||    
T  54629020 tttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 26107332 - 26107460
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||| || || ||||||| || ||||    
T  26107332 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaa 26107431  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| |||||| |||| ||||||||||||    
T  26107432 aagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 486
Target Start/End: Original strand, 27899415 - 27899540
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||          | |||||||||| ||||||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------taggattttctagtgaaattttagcatgaaa 27899504  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||| |||||||| |||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 12734160 - 12734070
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  12734160 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctcttcaa 12734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 31646414 - 31646293
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||  |||||||||||||||||||||||||| || || ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||  ||||||||||||    
T  31646314 tttcatgaaa--atgagatttctt 31646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 48379228 - 48379356
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| || || |||||||  | ||||    
T  48379228 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 48379327  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    | |||||||||||||| || |||||||||    
T  48379328 atgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 50903375 - 50903247
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||| ||||||| ||||||||||||    
T  50903275 aaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 375 - 486
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  375 aaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagat 474  Q
    |||||| |||||||||| |||||||| |||||||||| ||||||||||||||||||| | ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  475 ttcttaggattg 486  Q
    || |||||||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 466
Target Start/End: Complemental strand, 51737861 - 51737746
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |  || ||||||| || ||||    
T  51737861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 51737762  T
Q  451 aagtctttcatgaaaa 466  Q
    ||||||||||| ||||    
T  51737761 aagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 352 - 486
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  352 tctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  452 agtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||      ||||||||||||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 52810449 - 52810577
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||   ||||||||||||||||||||||||| ||  | ||||||| || ||||    
T  52810449 gtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaa 52810548  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||||||||||| ||||||||||||    
T  52810549 aaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 162 - 420
Target Start/End: Original strand, 10660421 - 10660675
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||||||          
T  10660421 gggggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 10660520  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||       ||||| ||||||       || ||| |||||||||  |||||| || |||| ||       || | ||||    
T  10660521 agtcttgtggtattcaatcaaga------ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtgg 10660614  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  10660615 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 52618100 - 52617978
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||      ||     
T  52618100 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aac 52618007  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||||| |||| ||||||||||||    
T  52618006 aagtctttcataaaaagatgagatttctt 52617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 162 - 409
Target Start/End: Complemental strand, 23753706 - 23753463
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||||||          
T  23753706 gggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 23753607  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||||      ||||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  23753606 agtcttgtggtattcaatcaagat------tctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 23753513  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  23753512 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 454
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgga-ttttgtgggattttctaatgaaattttagcatgaaaaagt 454  Q
    ||||||||||||||||||||||||| |||||| ||||||||  | |||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 351 - 475
Target Start/End: Original strand, 20833063 - 20833187
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||||||||||| |||||  || || ||||||| || ||||    
T  20833063 gtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaa 20833162  T
Q  451 aagtctttcatgaaaacatgagatt 475  Q
    |||| ||||||||||| || |||||    
T  20833163 aagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 351 - 486
Target Start/End: Complemental strand, 39842619 - 39842494
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| |||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||          ||||| ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||| |||||||||||| ||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 433 - 486
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  433 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 33996809 - 33996751
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagt 222  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatcatgaaaaagt 33996751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 10728776 - 10728658
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||| |||||||||||||||| |||||||||| ||||||||  |||||||||||||||||          || || ||||||| || ||||    
T  10728776 gtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 10728687  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  10728686 aagtctttcatgaaaagatgagatttctt 10728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 37454932 - 37455050
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||          || ||||||||||||||| || || ||||||| || ||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| ||||||||||||    
T  37455022 aagtatttcatgaaaagatgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 254
Target Start/End: Complemental strand, 15494050 - 15493958
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||| |||||||||| || ||||||| ||||||||||||||||||| || |||||||| |||||| ||||| |||||||||||||| ||||||    
T  15494050 ggggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaattt 15493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 16010749 - 16010805
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaa 218  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  16010749 ggggggtgtattggatcataattctaagggattttaaaagacttttttatcatgaaa 16010805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 485
Target Start/End: Original strand, 44276506 - 44276580
Alignment:
Q  411 tggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 485  Q
    ||||||||||||||||||||| |||||||||| || |||||| ||||||||||| ||||||||||| || |||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 166 - 283
Target Start/End: Original strand, 18749460 - 18749578
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    |||||||||||| | |||||||  | ||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||       |||    
T  18749460 ggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtc 18749559  T
Q  265 ttgtgttattcaatcaaga 283  Q
    ||||| |||||||||||||    
T  18749560 ttgtggtattcaatcaaga 18749578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 39038111 - 39038229
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||| |||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||| |          || ||||||| || ||||    
T  39038111 gtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggattttgtag----------tgtaattttaacaagaaa 39038200  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||||| |||| ||||||||||||    
T  39038201 aagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 50762185 - 50762067
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||| ||||||||| |||||| | ||||||  |||||||||||||||||          || || ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 50762096  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 27240562 - 27240441
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||           
T  27240562 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 27240463  T
Q  262 gtcttgtgttattcaatcaaga 283  Q
    |||||||| |||||||||||||    
T  27240462 gtcttgtggtattcaatcaaga 27240441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgga 414  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 468
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||| ||| | || |||||          |||| |||||||||||||||| | |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  451 aagtctttcatgaaaaca 468  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 10728919 - 10728833
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||| |  ||||||  | ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  10728919 gggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 10728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 31646604 - 31646514
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    ||||| ||||||| || | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| |||    
T  31646604 gggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 31646514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 50762371 - 50762248
Alignment:
Q  161 tggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnn 259  Q
    |||||| |||||||||| | |||| ||  ||||||||||||||||||| || |||||||||| |||| |||||||||||||||| ||| ||| ||         
T  50762371 tgggggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaa 50762272  T
Q  260 nngtcttgtgttattcaatcaaga 283  Q
      |||||||| |||||||||||||    
T  50762271 aagtcttgtggtattcaatcaaga 50762248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 39842748 - 39842667
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  39842748 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 39842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 50903563 - 50903441
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| ||||||| || |||||||||  ||||||||||| ||||||| |  ||||||||||||||| |||||||||||||||| ||| ||| ||          
T  50903563 gggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 50903464  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  50903463 agtcttgtggtattcaatcaaga 50903441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 52810312 - 52810392
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||| | |||||||  ||||||||||||||||||| |  |||||||||| |||| ||||||||||||||||||||    
T  52810312 tgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactcttt 52810392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10225849 - 10225795
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  10225849 ggattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagact 10225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 17946217 - 17946302
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||| | |||||||  |||||| |||||||||||| || ||||||||||||||| |||||||||||||| |||||    
T  17946217 gggggatgtattggattaggattctataggattt-aaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattcttt 17946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 48379050 - 48379122
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||||| |||||||||  ||||||||||||||||||| || || ||||||||| || ||||||||||||    
T  48379050 tgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaa 48379122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 52618285 - 52618205
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||| |||||| ||| | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||| |||||||    
T  52618285 gggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaaga 52618205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 54628758 - 54628851
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    |||||||||||||||||| || ||||||| ||||||| |||||||||||||||| ||| ||| ||       |||||||| |||||||||||||    
T  54628758 gattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 54628851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 12103518 - 12103602
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttg-tgtattcaatcaagactcttt 247  Q
    ||||| |||||||||| |  |||||||  |||||||||||||||||| || |||||| ||||||| ||||||||||||| |||||||    
T  12103518 gggggatgtattggattagaattctaa--gattttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactcttt 12103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 38772266 - 38772349
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||||||| ||| | |||||| |  ||||||||||||||||||  | ||||||||||||||| |||||||||||||| |||||    
T  38772266 gggtgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaagattcttt 38772349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10105073 - 10105019
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||| |||||| ||||||||||||||||    
T  10105073 ggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagact 10105019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 10216220 - 10216166
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||| |||||||| || |||||||||||| ||||||||||||||||    
T  10216220 ggattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagact 10216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 26107147 - 26107229
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||| |||||||||| | |||||||   |||||||||||| ||||| || |||||||||||||||  |||||||||||||||    
T  26107147 gggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagact 26107229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 28146318 - 28146264
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtc-ttgtgtattcaatcaagact 243  Q
    |||||||||||||||||||||| ||||||||||| | | ||||||||||||||||    
T  28146318 ggattttaaaagacttttttatgatgaaaaagtcatggggtattcaatcaagact 28146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 53929395 - 53929345
Alignment:
Q  205 tttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaattt 254  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  53929395 tttttatcatgaaaaaattttgtggtattcaatcaagactcttttcaattt 53929345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 2024122 - 2024175
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||| | |||||||| ||||||||||||||| ||||||||||||||||    
T  2024122 gattttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagact 2024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 422 - 479
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  422 ggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 479  Q
    ||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 539695 - 539615
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||| | | ||||||  |||||||||||| ||||| || ||||||||| ||||| |||||||||||| |||||||    
T  539695 tgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactcttt 539615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 284
Target Start/End: Complemental strand, 6131486 - 6131410
Alignment:
Q  208 ttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagat 284  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||| ||       |||||||||||||||||||||||    
T  6131486 ttatcatgaaaaagttttgtggtattcaatcaagactctttccaa-ttgaaaaaagtcttgtgttattcaatcaagat 6131410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  411 tggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||| |||| ||||| |||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 351 - 407
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattt 407  Q
    |||| ||||||||||||||||||||||||| ||||||| || |||| ||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 27899272 - 27899328
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaa 218  Q
    |||| ||||||| ||| ||||||||||  ||||||||||||||||||||| ||||||    
T  27899272 ggggagtgtattagattatgattctaaatgattttaaaagacttttttattatgaaa 27899328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Complemental strand, 45927034 - 45926950
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-----gtattcaatcaagact 243  Q
    ||||||||||||||   |||| ||| ||||||||||||||||||| || || ||||||||||||     ||||||||||||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaagtcttgtacgtagtattcaatcaagact 45926950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 254
Target Start/End: Original strand, 52079881 - 52079965
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||||||||||||||||||  ||||||||||   |||||    |||||||| |||||| ||||||||||| || ||||||||||||    
T  52079881 ggggtgtattggatcatgattctaagtgattttaaaa---ttttt----atgaaaaaatcttgtggtattcaatcatgattcttttcaattt 52079965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 6035344 - 6035293
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaag 240  Q
    ||||||||||||||||||| || |||||||| |||||| |||||||||||||    
T  6035344 ggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaag 6035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 19552234 - 19552155
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||||||||||||||   |||| ||| ||||||||||||| ||||||||  |  ||||||||||| ||||||||||||||    
T  19552234 gggggtgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaaga 19552155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 20832882 - 20832961
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||| |||||||||| | |||||||   |||||||||||| ||||| || |||||||||| |||| ||||||||||||||    
T  20832882 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaaga 20832961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 55235076 - 55235159
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttt 247  Q
    ||||||| ||||| | |||||||| | ||||||||||||||||| || |||||||| | | ||| |||||||||||||| ||||    
T  55235076 gggtgtagtggattaagattctaaggaattttaaaagactttttaattatgaaaaaatatagtgttattcaatcaagacccttt 55235159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 46749273 - 46749314
Alignment:
Q  187 aatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    |||||||||||||||| |||||||| || |||||||||||||    
T  46749273 aatggattttaaaagatttttttattataaaaaagtcttgtg 46749314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 165 - 241
Target Start/End: Complemental strand, 50900531 - 50900454
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||||| | ||||  || |||||||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 50900454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 51738044 - 51737971
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaa 235  Q
    |||| |||||||||| | |||||||   |||||||||||||||||| || |||||||| |||||| ||||||||    
T  51738044 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa 51737971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 243
Target Start/End: Complemental strand, 10225726 - 10225674
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||| ||||||| || || |||||||||||| ||||||||||||||||    
T  10225726 attttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagact 10225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 478
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  423 gattttctaatgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 478  Q
    ||||||||| |||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 36055094 - 36055014
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||||||||   ||||  || |||||||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  36055094 ggggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 36055014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 40897030 - 40897110
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatg-aaaaagtcttgt-gtattcaatcaaga 241  Q
    |||| |||||||||| | |||||||  ||||||||||| ||||||| || ||| ||||| |||||| ||||||||||||||    
T  40897030 ggggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaaga 40897110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 188; Significance: 1e-101; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 42735596 - 42735252
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||          
T  42735596 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 42735497  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||||||||||       |  |||||||||||||  |||||||||||||||||       |||||||||    
T  42735496 agtcttgtgttattcaatcaagatt------ctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtgg 42735403  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42735402 tattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttc 42735303  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    || ||||||||||||||||||||||||       |||||||||||||||||    
T  42735302 ataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 163 - 486
Target Start/End: Complemental strand, 23115486 - 23115168
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  23115486 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 23115387  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  23115386 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 23115293  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23115292 attcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttca 23115194  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||| ||||||||||    
T  23115193 tgaaaacatgagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 162 - 486
Target Start/End: Complemental strand, 26374747 - 26374429
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||          
T  26374747 gggggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaa 26374648  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||  ||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  26374647 agt--tgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 26374556  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26374555 tattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 26374456  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||    
T  26374455 atgaaaacatgagatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 2705138 - 2704794
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||| ||          
T  2705138 ggggggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaa 2705039  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  2705038 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 2704945  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  2704944 tattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttc 2704845  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  2704844 atgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 165 - 486
Target Start/End: Complemental strand, 42938433 - 42938116
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||| |||||||| || ||| ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||       ||    
T  42938433 gggtttattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 42938334  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||||||||||| ||      ||||       || |||||||||||||  |||||||||||||||||       ||||||||||||    
T  42938333 cttgtgttattcaatcaagattatttgtc------atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 42938240  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  42938239 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatg 42938140  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||    
T  42938139 aaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 165 - 510
Target Start/End: Complemental strand, 7507215 - 7506874
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||             
T  7507215 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaag 7507116  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
     ||||||||||||||| |||||      | || ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||||    
T  7507115 tttgtgttattcaatcgagatt------ccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 7507022  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7507021 tcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 7506922  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
     |||||||||||||||||||||||       |||||||||||||||||    
T  7506921 taaacatgagatttcttaggattgtttttttcttttaagattttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 5576939 - 5576595
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||| ||||||           
T  5576939 gggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 5576840  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtgg 359  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||        ||| |||||    
T  5576839 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtgg 5576746  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||     
T  5576745 tattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttt 5576646  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  5576645 atgaaaacatgagatttcttaggattgttttttccttttaagattttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 165 - 510
Target Start/End: Original strand, 42937250 - 42937582
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||          |||||       ||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaacca-------aatttaaaaaaagt 42937342  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaaagactcttaatcacttnnnnnnngtctagtggtatt 363  Q
    |||||||||||||||||||||| ||| ||      ||||       || |||||||||||||   |||||||||||||||       |||||||||||||    
T  42937343 cttgtgttattcaatcaagattttttgtc------atttaaaaaaagtcttgtggtattcaatc-gactcttaatcacttaaaaaaagtctagtggtatt 42937435  T
Q  364 caaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatga 463  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  42937436 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatga 42937535  T
Q  464 aaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||| |||||       |||||||||||||||||    
T  42937536 aaacatgagatttcttatgattgtttttttcttttaagattttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 262 - 510
Target Start/End: Complemental strand, 24502031 - 24501788
Alignment:
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||||||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  24502031 gtcttgtgttattcaatcaagatt------ctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 24501938  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24501937 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 24501838  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  24501837 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 167 - 510
Target Start/End: Original strand, 41478989 - 41479318
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtct 265  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||       || |    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 41479088  T
Q  266 tgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtattc 364  Q
    |||||||||||||||||||      ||||| ||||||       || |||||||||||||  |||||||||||||||||       ||||| ||||||||    
T  41479089 tgtgttattcaatcaagat------tctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattc 41479182  T
Q  365 aaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaa 464  Q
    |||||||||||||||||||| |||||| ||||||||||          ||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  41479183 aaaatcattcaaatttcgaatgattgtttaataaatca----------gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaa 41479272  T
Q  465 aacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||       |||||||||||||||||    
T  41479273 aacatgagatttcttaggattgtttttttcttttaagattttacta 41479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 167 - 510
Target Start/End: Original strand, 43959549 - 43959878
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagac-ttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtc 264  Q
    ||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||       |||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43959648  T
Q  265 ttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtatt 363  Q
    ||||||||||||||||||||      ||||| ||||||       || |||| ||||||||  |||| ||||||||||||       | |||||||||||    
T  43959649 ttgtgttattcaatcaagat------tctttgtcattttaaaaaagtcttgt-gtattcaatcaagattcttaatcacttcaaaaaagactagtggtatt 43959741  T
Q  364 caaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatga 463  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||||| || |    
T  43959742 caaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttaatta 43959831  T
Q  464 aaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||| |||||       |||||||||||||||||    
T  43959832 aaacatgagatttcttatgattgtttttttcttttaagattttacta 43959878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 351 - 485
Target Start/End: Complemental strand, 10392371 - 10392237
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10392371 gtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10392272  T
Q  451 aagtctttcatgaaaacatgagatttcttaggatt 485  Q
    || ||||||||||||||||||||||| ||||||||    
T  10392271 aaatctttcatgaaaacatgagatttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 164 - 474
Target Start/End: Complemental strand, 32711599 - 32711305
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||||||||||||||||||||  || ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||       |    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaag 32711500  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggta 361  Q
    ||||||||||||||||||||||      ||||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||||||    
T  32711499 tcttgtgttattcaatcaagat------tctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 32711406  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||| ||||             |||| |||||||||||||||||||||||||||||    
T  32711405 ttcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg-tgga-----------aatctattgaaattttagcatgaaaaagtctttcat 32711318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 14782454 - 14782141
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  14782454 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 14782355  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  14782354 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 14782261  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  14782260 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 14782161  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  14782160 atgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 44726129 - 44725816
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  44726129 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 44726030  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  44726029 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 44725936  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  44725935 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 44725836  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  44725835 atgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 162 - 476
Target Start/End: Complemental strand, 18959046 - 18958736
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||||||          
T  18959046 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaa 18958947  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||||||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  18958946 agtcttgtggtattcaatcaagact------ctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 18958853  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||| || || ||||||| || |||||||||||||    
T  18958852 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 18958753  T
Q  460 atgaaaacatgagattt 476  Q
    ||||||| || ||||||    
T  18958752 atgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 356 - 486
Target Start/End: Original strand, 4403184 - 4403314
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||||||||||||||||| || || ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  456 tttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| |||||||||||| ||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 9288591 - 9288463
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| || || ||||||| || ||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  9288491 aagtctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 10295515 - 10295386
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgga-ttttgtgggattttctaatgaaattttagcatgaa 449  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||||||| || || ||||||| || |||    
T  10295515 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaa 10295416  T
Q  450 aaagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||||||||||| ||||||||||||    
T  10295415 aaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 43166824 - 43166696
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| |  || ||||||| || ||||    
T  43166824 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 43166725  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| ||||||||||||    
T  43166724 aagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 168 - 479
Target Start/End: Complemental strand, 19718194 - 19717887
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  |||||||||||||| |||| || ||||||||||| || | ||||||||||||||| ||| ||||||       |||||    
T  19718194 tgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtctt 19718095  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||||||||    
T  19718094 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 19718001  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||||||||||||||| ||||| ||||||||  |||||| ||||||||||||||||||| || || ||||||| || |||||||||||| ||||||    
T  19718000 aaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaa 19717901  T
Q  466 acatgagatttctt 479  Q
    | ||||||||||||    
T  19717900 agatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 24214908 - 24214817
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 170 - 476
Target Start/End: Complemental strand, 39467778 - 39467477
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgt 268  Q
    |||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||       |||||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaactt-aaaaaagtcttgt 39467680  T
Q  269 gttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtattcaaa 367  Q
    | |||||||||||||       ||||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||||||||||    
T  39467679 ggtattcaatcaaga------ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 39467586  T
Q  368 atcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaac 467  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||| ||||||||| || || ||||||| || |||||| |||||||||||||     
T  39467585 atcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaag 39467486  T
Q  468 atgagattt 476  Q
    |||||||||    
T  39467485 atgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 26856139 - 26856267
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  26856139 gtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26856238  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||||  |||| || |||||||||    
T  26856239 aagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 358 - 480
Target Start/End: Complemental strand, 4950143 - 4950021
Alignment:
Q  358 ggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    ||||||||||||||||||| |||| || |||| | |||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  458 tcatgaaaacatgagatttctta 480  Q
    ||||| |||||| ||||||||||    
T  4950043 tcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 24502090 - 24502004
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttt 247  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  24502090 ggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattcttt 24502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 26373691 - 26373778
Alignment:
Q  162 ggggggtgtattgg-atcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  26373691 ggggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 359 - 486
Target Start/End: Complemental strand, 39189940 - 39189815
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||| |||||||||||||||||||||||| ||||||||  || ||||||||||||||  | |||||||| | |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||| ||||||    
T  39189842 catgaaaacatgagatttcttgggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 7466223 - 7466525
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||   |||||||||||| ||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||           
T  7466223 ggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7466322  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || ||| |||       |||| |||||    
T  7466323 gtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggt 7466416  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    |||||||||||||||||||| |||| ||||| ||||||||          |||||||||||||||||| || || ||||||| || ||||||||||||||    
T  7466417 attcaaaatcattcaaattttgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 7466506  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  7466507 tgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 18306095 - 18305977
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||          |||||||||||||||||| || || ||||||| || ||||    
T  18306095 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 18306006  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  18306005 aagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 162 - 409
Target Start/End: Complemental strand, 4031577 - 4031334
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||||| |||||| ||||||||| ||| ||||||          
T  4031577 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaa 4031478  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||      |||||| ||||||       || ||| |||||||||  |||||| || || | ||       |||| ||||    
T  4031477 agtcttgtggtattcaatcaaga------atctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtgg 4031384  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  4031383 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||| || ||||||||||||||||| |||||||| |||||| | |||||||||| ||||||| ||   |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  459 catgaaaa 466  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 16362268 - 16362337
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  16362268 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 32497597 - 32497715
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||          |||||||||||||||||| || || ||||||| || || |    
T  32497597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaga 32497686  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  32497687 aagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 465
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtggga--ttttctaatgaaattttagcatgaaaaagt 454  Q
    ||||||||||||||||| |||||| |||||||||| || |||||  || |||||||||||||||||||  |||| || ||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  455 ctttcatgaaa 465  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 32497376 - 32497492
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| ||| ||       |||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagtctt 32497475  T
Q  267 gtgttattcaatcaaga 283  Q
    ||| |||||||||||||    
T  32497476 gtggtattcaatcaaga 32497492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 8543407 - 8543534
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaaga-cttttttatcatgaaaaagtcttgt-gtattcaatcaag---actcttttcaatttnnn 257  Q
    ||||||||||| |||||||||||||| |||||||||||||  ||||||||||| ||||||| |||| |||||||||||||   ||||||||||||||       
T  8543407 gggggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaagatcactcttttcaatttaaa 8543506  T
Q  258 nnnngtcttgtgttattcaatcaagatt 285  Q
        || |||||||||| ||||||||||    
T  8543507 aaaagtgttgtgttatttaatcaagatt 8543534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 162 - 420
Target Start/End: Complemental strand, 42306104 - 42305850
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||||||||| ||||||||||||| | ||| ||||||          
T  42306104 gggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaaa 42306005  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||       ||||| ||||||       || ||| |||||||||  |||||| || |||| ||        ||| ||||    
T  42306004 agtcttgtggtattcaatcaaga------ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgg 42305911  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||| ||||||||||||||||||||| |||| |||  |||||| |||||||||||    
T  42305910 tattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 422 - 486
Target Start/End: Complemental strand, 9770503 - 9770439
Alignment:
Q  422 ggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||| ||| ||||| | |||||| ||||||||||||||||||||||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 31623767 - 31623825
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  31623767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 37857191 - 37857260
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| |||||||||||| ||||||||||||  ||||||||| ||||||||  ||||||||||||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 10295694 - 10295610
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    |||||||||| | |||||||  ||||||||||||| ||||| || ||||||||||||||| |||||||||||||||| ||| |||    
T  10295694 tgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 10295610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 168 - 283
Target Start/End: Complemental strand, 43166961 - 43166845
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||| ||  ||||||||||| ||||||| || | ||||||||||||| |||||||||||||||| ||| ||||||       |||||    
T  43166961 tgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 43166862  T
Q  267 gtgttattcaatcaaga 283  Q
    ||| |||||||||||||    
T  43166861 gtggtattcaatcaaga 43166845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 9288769 - 9288703
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    ||||| |||||||||| |||||||||   |||||||||||||||||| || ||||||||||||||||    
T  9288769 gggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtg 9288703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 16362084 - 16362165
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||| ||| | |||||||  ||||||||||||||||||| || |||||||||| |||| ||||||||||||||||    
T  16362084 ggggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 16362165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 39190084 - 39189997
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||| | |||||||| ||||||||||||||||||| || |||||    | |||| |||||||||||||||||||| ||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaattt 39189997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 162 - 283
Target Start/End: Original strand, 4402994 - 4403116
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| |||||| ||   |||||||||||||||||| ||  |||||||||||| | |||||||||||| ||| ||| ||| ||          
T  4402994 gggggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaaaaa 4403093  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  4403094 agtcttgtggtattcaatcaaga 4403116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 31623583 - 31623664
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | |||||||  | ||||||||||| ||||| || ||||||||||||||| | ||||||||||||||    
T  31623583 ggggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagact 31623664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 283
Target Start/End: Complemental strand, 18306279 - 18306158
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| ||||||| || | |||||||  | |||||| |||| ||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||           
T  18306279 ggggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 18306180  T
Q  262 gtcttgtgttattcaatcaaga 283  Q
    |||||||| |||||||||||||    
T  18306179 gtcttgtggtattcaatcaaga 18306158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 35142041 - 35142117
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    ||||||||||||||   |||| |||||||||||||||||||||||  |  | |||||||||||| ||||||||||||    
T  35142041 ggggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaa 35142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 43308592 - 43308520
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||||| | |||||||  | ||||||||||||||||| || ||||||||||||| | ||||||||||||    
T  43308592 tgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaa 43308520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Complemental strand, 29260362 - 29260283
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||||||||||||||   |||| ||| |||||||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  29260362 gggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 29260283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 9771128 - 9771050
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtgt-attcaatcaagactcttt 247  Q
    |||||||||| | |||| ||| ||||||||||| |  |||||||||||||||||  |||||| |||||||||| |||||||    
T  9771128 tgtattggattaagattttaagggattttaaaata--tttttatcatgaaaaagcattgtgtcattcaatcaatactcttt 9771050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 163 - 510
Target Start/End: Original strand, 25331018 - 25331361
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  25331018 gggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 25331117  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       |||||||| |    
T  25331118 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgat 25331211  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25331212 attcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 25331311  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  25331312 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 162 - 486
Target Start/End: Complemental strand, 41881404 - 41881082
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||         
T  41881404 ggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaa 41881305  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagt 357  Q
      ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||        || ||||    
T  41881304 aagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagt 41881211  T
Q  358 ggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  41881210 ggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 41881111  T
Q  458 tcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||||    
T  41881110 tcatgaaaacatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 22201902 - 22202221
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  22201902 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaa 22202001  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  22202002 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 22202095  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||| ||||||| || |||||| |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22202096 attcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 22202195  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    ||||||||| ||||||||||| ||||    
T  22202196 tgaaaacattagatttcttagcattg 22202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 174 - 485
Target Start/End: Complemental strand, 32951144 - 32950837
Alignment:
Q  174 ggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgtta 272  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||       |||||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  273 ttcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatca 371  Q
    ||||||||||||||||| ||      ||||       ||  ||||||||||||  |||||||||||||||||       |||||||||||||||||||||    
T  32951044 ttcaatcaagattatttgtc------atttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 32950951  T
Q  372 ttcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatga 471  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  32950950 ttcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatga 32950851  T
Q  472 gatttcttaggatt 485  Q
    ||||||||| ||||    
T  32950850 gatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 162 - 508
Target Start/End: Original strand, 1044696 - 1045035
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||          
T  1044696 ggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 1044795  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      | || ||||||       || |||||||||||||  |||||||||||||||||       |||||||||    
T  1044796 -gtcttgtgttattcaatcaagatt------ccttgtcatttaaaaa--gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 1044886  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1044887 tattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 1044986  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 508  Q
    |||||||||| ||||||||||| ||||       |||||||||||||||    
T  1044987 atgaaaacataagatttcttagaattgtttttttcttttaagattttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 165 - 486
Target Start/End: Original strand, 55302732 - 55303049
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| ||||||||| ||| |||||||| ||||||||||||| |||||||||| || || ||||||||||||||||||||||||||       ||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagt 55302831  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||| |||||||||||||      |||| ||||||       ||  ||||||||||||  |||||||||||||||||       ||||||||||||    
T  55302832 cttgtgtttttcaatcaagatt------ctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 55302925  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||    
T  55302926 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 55303025  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||| |||||    
T  55303026 aaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 165 - 486
Target Start/End: Complemental strand, 37046769 - 37046450
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| | |||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||||||       ||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 37046670  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn-gtctagtggta 361  Q
    ||||||||||||||||||||||      |||| ||||||       ||||||||||||||||  |||||||||||||||||        |||||||| ||    
T  37046669 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgata 37046576  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatg-aaattttagcatgaaaaagtctttca 460  Q
    || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  37046575 tttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttca 37046476  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    |||||| |||||||||||||||||||    
T  37046475 tgaaaatatgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 30009996 - 30009653
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||| ||||||           
T  30009996 gggggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaa 30009897  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||| |||||| |||      |||||||||||       ||  ||||||||||||  |||||||||||||||||       ||||||||||    
T  30009896 gtcttgtgttatttaatcaaaatt------ctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 30009803  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||| ||||||  || |||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  30009802 attcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttca 30009703  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||| |||||       |||||||||||||||||    
T  30009702 tgaaaacatgagatttcttaagattgtttttttcttttaagattttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 163 - 509
Target Start/End: Complemental strand, 39479676 - 39479332
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||| |||   ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||           
T  39479676 gggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaa 39479577  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn--gtctagtg 358  Q
    ||||||||||||||||||||||||      | || ||||||       || |||||||||||||  |||||||||||||||||         | || |||    
T  39479576 gtcttgtgttattcaatcaagatt------ccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtg 39479483  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  39479482 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtcttt 39479383  T
Q  459 catgaaaacatgagatttcttaggattgnnnnnnncttttaagattttact 509  Q
    ||||||| ||||||||||||||||||||       ||||||||||||||||    
T  39479382 catgaaagcatgagatttcttaggattgtttttttcttttaagattttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 165 - 456
Target Start/End: Original strand, 28541587 - 28541874
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||       ||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt 28541686  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       || | |||||||||||  |||||||||||||||||       ||||||||||||    
T  28541687 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 28541780  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  28541781 tcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 166 - 486
Target Start/End: Original strand, 1112784 - 1113099
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtgt-attcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| | ||||       ||    
T  1112784 ggtgtattggatcatgattctaa--gattttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagt 1112881  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
     |||| ||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||||    
T  1112882 attgtattattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 1112975  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||||||||||||    
T  1112976 tcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatg 1113075  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||    
T  1113076 aaaacatgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 184 - 510
Target Start/End: Complemental strand, 34228880 - 34228559
Alignment:
Q  184 tctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaag 282  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||| ||||||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtct-gtgttattcaatcaag 34228782  T
Q  283 attatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttc 381  Q
    |||      |||| ||||||       ||  ||||||||||||  || | ||||||||||||       ||||||||||||||||||||||| |||||||    
T  34228781 att------ctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttc 34228688  T
Q  382 gaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttag 481  Q
    ||| |||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  34228687 gaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaa 34228588  T
Q  482 gattgnnnnnnncttttaagattttacta 510  Q
    |||||       |||||||||||||||||    
T  34228587 gattgtttttttcttttaagattttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 167 - 509
Target Start/End: Complemental strand, 31315043 - 31314719
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtct 265  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||       ||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 31314944  T
Q  266 tgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaaagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||||||||| ||||||||||      |||| ||||||       || |||||||||||||   |||||||||||||||       |||||||||||||||    
T  31314943 tgtgttatttaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaa---gactcttaatcacttaaaaaaagtctagtggtattca 31314853  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||||||||||||||||||||| |||||||||||||||||          |||||||||||| |||||||||||||||||||||||||||||||||    
T  31314852 aaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 31314763  T
Q  466 acatgagatttcttaggattgnnnnnnncttttaagattttact 509  Q
    |||||||||||||||||||||       ||||||||||||||||    
T  31314762 acatgagatttcttaggattgtttttttcttttaagattttact 31314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 165 - 510
Target Start/End: Complemental strand, 24131289 - 24130957
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       ||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 24131190  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||       ||||||||||||    
T  24131189 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 24131096  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatg-aaaaagtctttcat 461  Q
    |||||          ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  24131095 tcaaa----------tttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcat 24131006  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||       |||||||||||||||||    
T  24131005 gaaaacatgagatttcttaggattgtttttttcttttaagattttacta 24130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 165 - 486
Target Start/End: Original strand, 7007262 - 7007580
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn-g 262  Q
    ||||| |||| ||||||||| ||| ||||||||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||        |    
T  7007262 gggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaaag 7007361  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    |||||||||||||||||||||||      || | ||||||       ||  ||||||||||||  |||||||||||||||||       |||||||||||    
T  7007362 tcttgtgttattcaatcaagatt------ctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 7007455  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||  | ||||||    
T  7007456 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcat 7007555  T
Q  462 gaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||| |||||    
T  7007556 gaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 166 - 486
Target Start/End: Complemental strand, 46635959 - 46635648
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatga-aaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||        |    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaat 46635860  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||| |||||||||||||||      ||||| ||||||       || |||||||||||||  |||||||||||||||||       || |||| ||||    
T  46635859 cttgtattattcaatcaagat------tctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtat 46635766  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| |||||||| |||||      |||||||||||||||| || |||||||||||||||||||||||||||||     
T  46635765 tcaaaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcata 46635672  T
Q  463 aaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||    
T  46635671 aaaacatgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 162 - 465
Target Start/End: Complemental strand, 19741227 - 19740929
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| ||||||  |||||||||||||  |||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||          
T  19741227 gggggatgtattcaatcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 19741129  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       ||  |||||||||||   |||||| ||||||||||       |||| ||||    
T  19741128 agtcttgtgttattcaatcaagatt------ctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtgg 19741035  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  19741034 tattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttc 19740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 313 - 486
Target Start/End: Original strand, 12112977 - 12113151
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  || ||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  12112977 ttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaat 12113076  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12113077 ggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 165 - 429
Target Start/End: Complemental strand, 25504955 - 25504696
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||       ||    
T  25504955 gggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 25504857  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||||||      |||| |||||||        | ||||| |||||||  |||||||||||||||||       ||| |||| |||    
T  25504856 cttgtgttattcaatcaagat------tcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatat 25504763  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttc 429  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25504762 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 351 - 508
Target Start/End: Original strand, 41320881 - 41321038
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 508  Q
    ||||||||||| |||||||||||||||||| |||||       |||||||||||||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 313 - 486
Target Start/End: Original strand, 42786716 - 42786890
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||| ||       ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  42786716 ttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgat 42786815  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  42786816 ggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 5441290 - 5441603
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||          
T  5441290 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaa 5441389  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  5441390 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 5441483  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  5441484 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 5441583  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  5441584 atgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 163 - 485
Target Start/End: Complemental strand, 40537464 - 40537161
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||| ||| |||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||  |||||           
T  40537464 gggggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 40537365  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||       ||||| ||||||       || |||||||||||||  || ||||||||||||||            |||||    
T  40537364 gtcttgtgttattcaatcaaga------ctctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaat-----gtggt 40537276  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||| |||||||||| |||||| ||||||||| ||||||||||||||||||||          ||||||||||||||||||||||||||||    
T  40537275 attcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttca 40537186  T
Q  461 tgaaaacatgagatttcttaggatt 485  Q
    |||||||||||||||||||||||||    
T  40537185 tgaaaacatgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 352 - 510
Target Start/End: Original strand, 3436665 - 3436823
Alignment:
Q  352 tctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaa 451  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||    
T  3436665 tctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaa 3436764  T
Q  452 agtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||| |||||||||||||| ||||||||||| ||||       |||||||||||||||||    
T  3436765 agtttttcatgaaaacataagatttcttagaattgtttttttcttttaagattttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 27767942 - 27768255
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||| | ||| ||||||          
T  27767942 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaa 27768041  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  27768042 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 27768135  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  27768136 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 27768235  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  27768236 atgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 54341031 - 54341343
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  54341031 ggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 54341130  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||| || ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| |||||    
T  54341131 gtcttatggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggt 54341224  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||||    
T  54341225 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 54341324  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  54341325 tgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 163 - 442
Target Start/End: Original strand, 23464840 - 23465117
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagactttttt--atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnn 259  Q
    |||| |||||||||| |||||||||| | ||||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||| |||| |         
T  23464840 ggggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaa 23464939  T
Q  260 nngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
      ||||||| ||||||||||||||||      | || ||||||       |||||||  |||||||  |||||||||||||||||       ||||||||    
T  23464940 aagtcttgtattattcaatcaagatt------ccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtg 23465033  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaatttta 442  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  23465034 gtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 351 - 456
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  451 aagtct 456  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 313 - 457
Target Start/End: Original strand, 25446082 - 25446227
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  25446082 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgat 25446181  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    ||||||||||||||||| || |||||||||||||||||||||||||    
T  25446182 ggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 167 - 486
Target Start/End: Original strand, 53275727 - 53276046
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnng--- 262  Q
    |||||||||||||||||||||| | ||||||||| |  |||||||||||||||| |||||  | |||||||||||||||||| |||||                
T  53275727 gtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttgcaggattcaatcaagactctttccaattaaaaaaaaaaaa 53275826  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    |||||||||||||||| |||||||||| ||      ||||       || |||| ||||||||  |||| | ||||||||||       |||||||| ||    
T  53275827 tcttgtgttattcaataaagattatttgtc------atttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgata 53275920  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca- 460  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||     
T  53275921 tttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcat 53276020  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    | ||||| | |||||| |||||||||    
T  53276021 taaaaactttagattttttaggattg 53276046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 354 - 486
Target Start/End: Complemental strand, 27454210 - 27454078
Alignment:
Q  354 tagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaag 453  Q
    ||||||||||||||||||||||||||| ||| |||| | |||||||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  454 tctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||| | |||| ||| |||||    
T  27454110 tctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 37828537 - 37828409
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || |||||||  | ||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  37828437 aagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||||||||||| ||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 51320807 - 51321120
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  | ||||||||||||||||| || |||||||| | ||||| ||||||||||||||| ||| ||| ||          
T  51320807 gggggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaaaaa 51320906  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     || ||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||    
T  51320907 agttttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 51321000  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||  ||||| || || ||||||| || |||||||| ||||    
T  51321001 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttc 51321100  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  51321101 atgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 162 - 479
Target Start/End: Complemental strand, 54853788 - 54853475
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||| ||  | ||||||||||||||||| || | |||||||||||||| ||||||||||||||| ||| ||| ||          
T  54853788 gggggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 54853689  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || |||  ||||||||  |||||| || |||||||       |||| ||||    
T  54853688 agtcttgtggtattcaatcaagact------ctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 54853595  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||| ||||||    
T  54853594 tattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttc 54853495  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  54853494 atgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 357 - 477
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||| |||||||||| ||||||||  ||||||| ||||||||||||||||||||| ||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  457 ttcatgaaaacatgagatttc 477  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 351 - 486
Target Start/End: Original strand, 9163147 - 9163274
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||| |||||||||||||||||     
T  9163147 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa- 9163245  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
           ||||||||||||||||||||||| |||||    
T  9163246 -------tcatgaaaacatgagatttcttatgattg 9163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 7250090 - 7249968
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt-nnnnnnng 262  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||        |    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaaaaaaag 7249991  T
Q  263 tcttgtgttattcaatcaagatt 285  Q
    |||||||||||||||||||||||    
T  7249990 tcttgtgttattcaatcaagatt 7249968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 351 - 476
Target Start/End: Original strand, 37915898 - 37916023
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || | ||||| || ||||    
T  37915898 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaa 37915997  T
Q  451 aagtctttcatgaaaacatgagattt 476  Q
    ||||| |||||||||| || ||||||    
T  37915998 aagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 32322162 - 32322290
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| || || |||||||  | ||||    
T  32322162 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 32322261  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    | ||||||||| |||| ||||||||||||    
T  32322262 atgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 163 - 285
Target Start/End: Original strand, 41320637 - 41320758
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtgtattcaatcaagactcttttcaatttnnnnnnng 262  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| || |||||||||||||||| ||| ||||||       |    
T  41320637 gggggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtcgtg-gtattcaatcaagactgtttccaatttaaaaaatg 41320735  T
Q  263 tcttgtgttattcaatcaagatt 285  Q
    |||||||||||||||||||||||    
T  41320736 tcttgtgttattcaatcaagatt 41320758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 42786654 - 42786739
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagac-ttttttatcatgaaaaagtcttgt-gtattcaatcaagactctt 246  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  42786654 gggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 168 - 479
Target Start/End: Complemental strand, 30967613 - 30967316
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| |||||| ||  ||||||||||||| ||||| || ||||||||||||||| |||||||||||||||| ||| ||||||       |||||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 30967514  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| |||||||||||||       ||||| ||||||       |||||| |||||||||  |||| | || |||||||       |||| ||||||||||    
T  30967513 gtggtattcaatcaaga------ctctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattca 30967420  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||||||||||| ||||||||| ||||||||          |||||||||||||||||| || || ||||||| || |||||| ||||||||||||    
T  30967419 aaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaa 30967330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 8711979 - 8712065
Alignment:
Q  393 taataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||  |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8711979 taataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 23987285 - 23987403
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||          || || ||||||| || ||||    
T  23987285 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaa 23987374  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  23987375 aagtctttcatgaaaagatgagatttctt 23987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 479
Target Start/End: Original strand, 12913301 - 12913413
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||| |||||||||| ||||||||          ||||||||||||||||||||| |||||||||| || |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  457 ttcatgaaaacatgagatttctt 479  Q
    |||||||| ||||||||||||||    
T  12913391 ttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 351 - 486
Target Start/End: Complemental strand, 39307388 - 39307253
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||| ||||||||||||||| || |||| | |||| |||    |||||||| |||||||||||||||||| |||||||||| |||||||    
T  39307388 gtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaa 39307289  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||| | | || ||||||||||||||||||| ||||    
T  39307288 aagtttctgataaaaacatgagatttcttagaattg 39307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 357 - 479
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||||||| |||||| ||||||||          ||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  457 ttcatgaaaacatgagatttctt 479  Q
    ||||| || ||||||||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 24736448 - 24736534
Alignment:
Q  393 taataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||  ||||||||||||||||||| ||||||||| |||||||||| || ||| |||||||||||||||||||||||||||||    
T  24736448 taataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||| ||||||||||||||||||||| |||||||||| |||   ||  |||||||||| ||||||||||||||| || || ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||||||||||| ||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  411 tggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 37915671 - 37915753
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||| |||||||||  ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  37915671 ggggggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 37915753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 49469210 - 49469331
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    ||||||||||||||||||||| || | |||||||||||||||||| |  |||| ||||||||| ||||| |||||||||||||| ||||||       ||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaatttaagaaaagt 49469309  T
Q  264 cttgtgttattcaatcaagatt 285  Q
    ||||||||||||||| ||||||    
T  49469310 cttgtgttattcaattaagatt 49469331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 162 - 285
Target Start/End: Original strand, 20021230 - 20021354
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| || ||| ||| ||||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||| ||||||          
T  20021230 gggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaaa 20021329  T
Q  261 ngtcttgtgttattcaatcaagatt 285  Q
     || ||||| |||||||||||||||    
T  20021330 agttttgtggtattcaatcaagatt 20021354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 163 - 422
Target Start/End: Complemental strand, 29649986 - 29649731
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||| |||| |||||||||||||||| ||| ||||||           
T  29649986 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaa 29649887  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||      ||||||    ||||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| |||||    
T  29649886 gtcttgtggtatt------agattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggt 29649793  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgg 422  Q
    |||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||    
T  29649792 attcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 36479366 - 36479249
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||| ||||||||||||||||||| | ||||||||  ||||||||||||||||           || |||||||||||||  |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaa 36479278  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||| ||||||||||||||||||||    
T  36479277 aagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 25445983 - 25446059
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaaga 25446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 357 - 442
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaatttta 442  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||   |||||| || |||||||||||||||||| ||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 409
Target Start/End: Complemental strand, 49835126 - 49834890
Alignment:
Q  169 gtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttg 267  Q
    ||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||| ||| ||| ||| ||       ||||||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  268 tgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaa 366  Q
    || ||||||||||||| |      |||| ||||||       |  ||| |||||||||  |||||| || |||||||       |||| |||||||||||    
T  49835026 tggtattcaatcaagact------ctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 49834933  T
Q  367 aatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    ||||||||||||||||||||||||| ||||||||  |||||||    
T  49834932 aatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 371 - 477
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  371 attcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagc-atgaaaaagtctttcatgaaaacat 469  Q
    ||||||||||  ||||||||| |||||||| |||||||| |||||||| ||||||||| ||||||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  470 gagatttc 477  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 247
Target Start/End: Original strand, 28370859 - 28370938
Alignment:
Q  169 gtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||||||| | |||||||||| |||||||| |||||||| || ||||||||||||||| |||||||||||| |||||||    
T  28370859 gtattggattaggattctaatgaattttaaaggactttttaattatgaaaaagtcttgtggtattcaatcaaaactcttt 28370938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 485
Target Start/End: Original strand, 28483970 - 28484093
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||| | ||||||||          |||||||||| ||||||| || || || |||| || ||||    
T  28483970 gtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggattttgtaggattttgtagtgtaa-tttaacaagaaa 28484058  T
Q  451 aagtctttcatgaaaacatgagatttcttaggatt 485  Q
    |||||||||||||||| | ||||||||||| ||||    
T  28484059 aagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 351 - 480
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatg-aa 449  Q
    |||| |||||||| | | |||||||||||| |||  ||||| ||||||||  ||||  |||  |||||||||||||||||| |||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  450 aaagtctttcatgaaaacatgagatttctta 480  Q
    ||| | ||||||| |||||||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 23987142 - 23987228
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||| | |||| ||  ||||||||||||||||||| || ||||||||||||||| |||||||||||| |||||||    
T  23987142 gggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactcttt 23987228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 409
Target Start/End: Complemental strand, 32684123 - 32684065
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  169 gtattggatcatgattctaatggattttaaaagacttttt 208  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 5800049 - 5800107
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||  |||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 37828693 - 37828632
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    |||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| |||    
T  37828693 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 37828632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 50018322 - 50018391
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| ||||||||||| ||||||||||||| |||||||||| ||||||||   ||||| |||||||||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 49501646 - 49501526
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||| |||||||||||||||||||||||| |||||| ||||||||          |||||||||||| ||||| || || ||||||| || ||||    
T  49501646 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaa 49501557  T
Q  451 aagtctttc--atgaaaacatgagatttctt 479  Q
    |||||||||  || |||| ||||||||||||    
T  49501556 aagtctttcatataaaaagatgagatttctt 49501526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 49507711 - 49507591
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||| |||||||||||||||||||||||| |||||| ||||||||          |||||||||||| ||||| || || ||||||| || ||||    
T  49507711 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaa 49507622  T
Q  451 aagtctttc--atgaaaacatgagatttctt 479  Q
    |||||||||  || |||| ||||||||||||    
T  49507621 aagtctttcatataaaaagatgagatttctt 49507591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 24736336 - 24736422
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaattt 254  Q
    |||||||||| | |||||||| | ||||||||||| ||||| || ||| ||| |||||||| ||||||||||||||||||| ||||||    
T  24736336 tgtattggattaggattctaaggaattttaaaagattttttaattatg-aaatgtcttgtgatattcaatcaagactctttgcaattt 24736422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 36728123 - 36728052
Alignment:
Q  171 attggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||| || |||||||  |||||||||||| ||||| || ||||||||||||||| ||||||||||||||    
T  36728123 attggattataattctaacagattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaaga 36728052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 38230797 - 38230851
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  38230797 ggattttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagact 38230851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 44646718 - 44646800
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||| |||| ||||  ||  |||||||||||||||||| || || ||||| |||||| ||||||||||||||||    
T  44646718 ggggggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagact 44646800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 53271934 - 53271988
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||  || ||||||||||||| |||||||||||||||    
T  53271934 ggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagact 53271988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 12913138 - 12913195
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||||| ||||| ||  |||||||||||||| ||||||||||||||||||||    
T  12913138 gattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactcttt 12913195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 165 - 254
Target Start/End: Complemental strand, 27454407 - 27454315
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatca--agactcttttcaattt 254  Q
    |||| ||||||||||||||| ||| | ||||||||||||| |||||| |||||||| | ||||| |||||||| |  ||| ||||||||||||    
T  27454407 gggtatattggatcatgattttaaggaattttaaaagactgttttataatgaaaaaattttgtgatattcaataatgagattcttttcaattt 27454315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 28483898 - 28483951
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttg-tgtattcaatcaagact 243  Q
    |||||||||||||||||| || ||||||||||||||  ||||||||||||||||    
T  28483898 gattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaagact 28483951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 28847188 - 28847111
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||| ||||||||||   |||| ||| |||||||||||||||||||||| || ||||||||| || ||||||||||||    
T  28847188 ggggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 44771095 - 44771046
Alignment:
Q  199 aagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttt 247  Q
    |||||||||| || |||||||||||||||| |||||||||||||||||||    
T  44771095 aagactttttgattatgaaaaagtcttgtgatattcaatcaagactcttt 44771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 41761978 - 41762058
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||   |||| ||| ||||||||||||||||| | || || |||||||||||| ||||| ||||||||||    
T  41761978 ggggtgtattggattgagattttaaaggattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagact 41762058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 467775 - 467862
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||| |||||||| | | ||||||||||| ||||| || |||||||||| |||| ||||||||| |||| | ||| ||||||    
T  467775 tgtattggattatgattcttaggaattttaaaagattttttaattatgaaaaagttttgtcgtattcaattaagattatttgcaattt 467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 3436531 - 3436603
Alignment:
Q  214 tgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagatt 285  Q
    ||||||||||||||| ||||||||||| ||||||||||||||        | |||||||||||||||||||||    
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagatt 3436603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 28100670 - 28100587
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||||   ||||  || || ||||||||||||||||| || || |||||||||||| ||||||||||||||||    
T  28100670 ggggggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagact 28100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 50018143 - 50018230
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||| |  ||||||  ||||||||||| | ||||| || || |||||||||||| |||||||||||||||| ||| ||||||    
T  50018143 tgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaattt 50018230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 8584090 - 8584012
Alignment:
Q  164 ggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||||||   ||||  || ||||||||||||||||||||||  |  ||||||||||| ||||||||||||||    
T  8584090 ggggtgtattggattgagatttcaaaggattttaaaagacttttttattttataaaagtcttgtggtattcaatcaaga 8584012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 32321983 - 32322057
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    |||||||||| | |||||||   || ||||||||||||||| || |||||||||| |||| ||||||||||||||    
T  32321983 tgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaga 32322057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 422 - 476
Target Start/End: Complemental strand, 32684072 - 32684018
Alignment:
Q  422 ggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 476  Q
    ||||||| || || ||||||| || |||||||||||||||||||| |||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 478
Target Start/End: Complemental strand, 13400887 - 13400814
Alignment:
Q  405 ttttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 478  Q
    |||||||| |||||||| |||||| |||||||| |||  ||| ||||| ||||  || ||||||||||||||||    
T  13400887 ttttgatgaattttgtgagattttttaatgaaaatttttcataaaaaaatcttctattaaaacatgagatttct 13400814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 29855576 - 29855661
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaattt 254  Q
    |||||||| | |||||||  | ||||||||||| ||||  || |||||||||||||||| |||||||| |||||| ||| ||||||    
T  29855576 tattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaattt 29855661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 36479506 - 36479423
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||| |||||||||| |  ||||||| | ||||||||||| ||||| || ||||||||||||||| |||||||||||| |||||||    
T  36479506 ggggatgtattggattagaattctaa-gaattttaaaaga-tttttaattatgaaaaagtcttgtggtattcaatcaaaactcttt 36479423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 478
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  445 atgaaaaagtctttcatgaaaacatgagatttct 478  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 32684235 - 32684179
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||| |||||||| || ||||||||||||||| ||||||||| |||| |||||    
T  32684235 attttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattcttt 32684179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 49501827 - 49501767
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    |||||| ||| | |||||||  ||||||||||||| ||||| || ||||||||||||||||    
T  49501827 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtg 49501767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 49507892 - 49507832
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg 228  Q
    |||||| ||| | |||||||  ||||||||||||| ||||| || ||||||||||||||||    
T  49507892 tgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtg 49507832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 88)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 165 - 485
Target Start/End: Complemental strand, 43581406 - 43581090
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||       ||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 43581307  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       || |||| ||||||||  |||||||||||||||||       ||||||||||||    
T  43581306 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 43581213  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43581212 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 43581113  T
Q  463 aaaacatgagatttcttaggatt 485  Q
    |||||||||||||||||||||||    
T  43581112 aaaacatgagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 162 - 510
Target Start/End: Original strand, 30440684 - 30441028
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||          
T  30440684 ggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 30440783  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||        | |||||||||||||  |||||||||||||||||       |||||||||    
T  30440784 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 30440877  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  30440878 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttc 30440977  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
     ||||||||||||||||||||||||||       |||||||||||||||||    
T  30440978 gtgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 163 - 486
Target Start/End: Complemental strand, 44343714 - 44343395
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  44343714 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 44343615  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || ||||| |||||||  |||||||||||||||||       || |||||||    
T  44343614 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggt 44343521  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44343520 atttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 44343421  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
     |||||||||||||||||||||||||    
T  44343420 cgaaaacatgagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 18915053 - 18914710
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||           
T  18915053 gggggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaa 18914954  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||||||||||||||| |||      |||| || |||       || |||||||||||||  |||||||||||||||||       ||||||||||    
T  18914953 gtcttgtgttattcaatcaaaatt------ctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt 18914860  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18914859 attcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 18914760  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||||||||||||||||||||||||       |||||||||||||||||    
T  18914759 tgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 165 - 510
Target Start/End: Original strand, 973074 - 973416
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| ||||||       |    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaag 973173  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggta 361  Q
    | |||||||||||||||||||||      |||| ||||||       || |||||||||||||  |||||||||||||||||        | ||||||||    
T  973174 ttttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggta 973267  T
Q  362 ttcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcat 461  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  973268 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcat 973367  T
Q  462 gaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||       |||||||||||||||||    
T  973368 gaaaacatgagatttcttaggattgtttttttcttttaagattttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 12893296 - 12893616
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||||||          
T  12893296 ggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 12893395  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||||||||| ||  |||||||||||||||||       ||||| |||    
T  12893396 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatgg 12893489  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  12893490 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttc 12893589  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||||||||||    
T  12893590 atgaaaacatgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 165 - 510
Target Start/End: Original strand, 47914157 - 47914498
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||       ||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagt 47914256  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       ||  ||||||||||||  |||||||||||||||||       |||||||| |||    
T  47914257 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 47914350  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47914351 tcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 47914450  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||       |||||||||||||||||    
T  47914451 aaaacatgagatttcttaagattgtttttttcttttaagattttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 163 - 510
Target Start/End: Original strand, 34008904 - 34009245
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtgtattcaatcaagactcttttcaatttnnnnnnng 262  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||       |    
T  34008904 gggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtctggt--attcaatcaagactcttttcaatttaaaaaaag 34009001  T
Q  263 tcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtc-tagtggt 360  Q
    ||||||||||||||||||||||||||| ||      ||||       || |||||||||||||  || ||||||||||||||       ||| |||||||    
T  34009002 tcttgtgttattcaatcaagattatttgtc------atttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggt 34009095  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||    
T  34009096 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttca 34009195  T
Q  461 tgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
     |||||||||||||||||||||||||       |||||||||||||||||    
T  34009196 agaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 163 - 510
Target Start/End: Complemental strand, 40996968 - 40996624
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||          
T  40996968 gggggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaa 40996869  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||| |||||||||||||||||||      |||| ||||||       || |||||||||||||  ||||||||||||| |||       |||||||||    
T  40996868 agtctcgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtgg 40996775  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  40996774 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttc 40996675  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||||||||||       |||||||||||||||||    
T  40996674 atgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 165 - 510
Target Start/End: Original strand, 47879059 - 47879400
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||       ||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagt 47879158  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    ||||||||||||||||||||||      |||| ||||||       ||  ||||||||||||  |||||||||||||||||       |||||||| |||    
T  47879159 cttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatat 47879252  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatg 462  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  47879253 tcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 47879352  T
Q  463 aaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| |||||       |||||||||||||||||    
T  47879353 aaaacatgagatttcttaagattgtttttttcttttaagattttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 168 - 486
Target Start/End: Complemental strand, 7719574 - 7719259
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaa-gactcttttcaatttnnnnnnngtct 265  Q
    ||||||||||||||||| |||  |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||       ||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtct 7719475  T
Q  266 tgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattc 364  Q
    |||||||||||||||| ||||||| ||      ||||       || |||||||||||||  |||||||||||||||||        |||||||||||||    
T  7719474 tgtgttattcaatcaatattatttgtc------atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattc 7719381  T
Q  365 aaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaa 464  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7719380 aaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 7719281  T
Q  465 aacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||    
T  7719280 aacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 167 - 510
Target Start/End: Complemental strand, 20275577 - 20275238
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtct 265  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||| ||||||       ||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 20275478  T
Q  266 tgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattc 364  Q
    || |||||||||||||||||      | || ||||||       || || ||||||||||  |||||||||||||||||       ||||  ||||||||    
T  20275477 tgggttattcaatcaagatt------ccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattc 20275384  T
Q  365 aaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaa 464  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  20275383 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaa 20275284  T
Q  465 aacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    | ||||||||||||||| ||||       |||||||||||||||||    
T  20275283 agcatgagatttcttagcattgtttttttcttttaagattttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 216 - 510
Target Start/End: Original strand, 34695215 - 34695505
Alignment:
Q  216 aaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngtttt 314  Q
    ||||||||||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||      | || ||||||       |||||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagatt------ccttgtcatttaaaaaaagtttt 34695308  T
Q  315 gtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatgg 413  Q
    |||||||||||  |||||||||||||||||       ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  34695309 gtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatgg 34695408  T
Q  414 attttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  34695409 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 7113342 - 7113660
Alignment:
Q  163 gggggtgtattggatcat---gattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtgtattcaatcaagactcttttcaatttnnnn 258  Q
    ||||||||||||||||||   |||||||| |||||||||||||||||||| ||||||| ||||| ||  |||||||||||||||||||| ||||||        
T  7113342 gggggtgtattggatcatcatgattctaagggattttaaaagactttttttatcatgacaaagtatttggtattcaatcaagactctttccaatttaaaa 7113441  T
Q  259 nnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaaagactcttaatcacttnnnnnnngtctagtg 358  Q
       ||||||||||||||||| |||||| ||||||      ||||       |||||||||||||||| |   || ||||||||||       ||| ||||    
T  7113442 aaagtcttgtgttattcaattaagattttttatc------atttaaaaaaagttttgtggtattcaata---cttttaatcacttaaaaaaagtccagtg 7113532  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||    
T  7113533 gtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtcttt 7113632  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||| ||||||||||||||    
T  7113633 catgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 7718535 - 7718361
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7718535 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgat 7718436  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7718435 ggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 166 - 486
Target Start/End: Complemental strand, 32143235 - 32142916
Alignment:
Q  166 ggtgtattggatcatgattctaatggattttaaaagactttttt-atcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||       ||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagt 32143136  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnn--gtctagtggt 360  Q
    ||||||||||||||| ||      || | ||| ||||||       || || ||||||| ||  |||||||||||||||||         |||  |||||    
T  32143135 cttgtgttattcaataaa------ttttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggt 32143042  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  32143041 attcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttcca 32142942  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    | |||||||||||||||||| |||||    
T  32142941 taaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 162 - 486
Target Start/End: Original strand, 10068347 - 10068668
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||  |||||||| ||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||||||| ||||||          
T  10068347 gggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaaa 10068446  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngt-tttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtg 358  Q
     |||||||| |||| |||||||| |      ||||  |||||       || |||| |||||||||  |||| | || |||||||       |||| |||    
T  10068447 agtcttgtggtatttaatcaagact------ctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtg 10068540  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    |||||||||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  10068541 gtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtattt 10068640  T
Q  459 catgaaaacatgagatttcttaggattg 486  Q
    ||| |||||||||||||| |||||||||    
T  10068641 cataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 165 - 418
Target Start/End: Original strand, 31638766 - 31639015
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngt 263  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||       ||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagt 31638865  T
Q  264 cttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattc-aaaaagactcttaatcacttnnnnnnngtctagtggtat 362  Q
    |||||||||||||||||| ||      ||||| ||||||        || |||||||||| |  |||||||||||||||||       ||||||||||||    
T  31638866 cttgtgttattcaatcaaaat------tctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtat 31638959  T
Q  363 tcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggatttt 418  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31638960 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 327 - 510
Target Start/End: Complemental strand, 39219534 - 39219352
Alignment:
Q  327 aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggatt 426  Q
    |||||||||||||||||       ||||| |||||||||||||||||||||||| || | ||||| ||||||||||||||||||||||||||||||||||    
T  39219534 aagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggatt 39219436  T
Q  427 ttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||       |||||||||||||||||    
T  39219435 ttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttacta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 162 - 467
Target Start/End: Original strand, 727400 - 727692
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttg-tgtattcaatcaagactcttttcaatttnnnnnn 260  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||          
T  727400 ggggtgtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaa 727499  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcactt-nnnnnnngtctagtg 358  Q
     |||||||||||||||||||| ||      ||||| ||||||       || ||||| |||||||  || |||||| |||||||         ||||||     
T  727500 agtcttgtgttattcaatcaaaat------tctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagta 727593  T
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 458  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||          ||||||||||||||||||| ||||||||||||||||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaatca----------gattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 163 - 479
Target Start/End: Complemental strand, 29615082 - 29614770
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| |||||||||   |||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||           
T  29615082 ggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 29614983  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||| |    
T  29614982 gtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgat 29614889  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||||    
T  29614888 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 29614789  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  29614788 tgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 162 - 479
Target Start/End: Original strand, 28342228 - 28342541
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||| | ||| ||||||          
T  28342228 gggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaa 28342327  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaaa-agactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||   ||||| || |||| ||       |||| ||||    
T  28342328 agtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtgg 28342421  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||    
T  28342422 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 28342521  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||| ||||||||||||    
T  28342522 atgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 23101180 - 23101492
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| ||||| |||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||| | ||| ||||||           
T  23101180 ggggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaa 23101279  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||||||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| |||||    
T  23101280 gtcttgtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggt 23101373  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||||||    
T  23101374 attcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 23101473  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| ||||||||||||    
T  23101474 tgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 355 - 456
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  355 agtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagt 454  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  455 ct 456  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 168 - 479
Target Start/End: Original strand, 39783986 - 39784293
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    ||||||||||   |||||||  ||||||||||||||||||| || ||||||||||| |||| ||||||||||||||| ||| ||||||       |||||    
T  39783986 tgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 39784085  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||||||||    
T  39784086 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattca 39784179  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||||||||||    
T  39784180 aaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 39784279  T
Q  466 acatgagatttctt 479  Q
    | ||||||||||||    
T  39784280 agatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 3022992 - 3023120
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  3022992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 3023091  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| ||||||||||||    
T  3023092 aagtttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 168 - 479
Target Start/End: Complemental strand, 9882549 - 9882243
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||||||||||||| || ||||||||||||||| ||| ||||||       || ||    
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtttt 9882450  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||||||||    
T  9882449 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 9882356  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    ||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| || || |||||||  | ||||||||||||||| |||    
T  9882355 aaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaa 9882257  T
Q  466 acatgagatttctt 479  Q
    | ||||||||||||    
T  9882256 aaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 18838455 - 18838583
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  18838455 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18838554  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||| ||||||||||| ||||||||||||    
T  18838555 aagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 351 - 458
Target Start/End: Original strand, 12963767 - 12963874
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| | ||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  451 aagtcttt 458  Q
    ||||||||    
T  12963867 aagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 357 - 486
Target Start/End: Complemental strand, 43187485 - 43187356
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||  |||||||||| ||||||| |||||||||| |||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  457 ttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||| ||||||||||| || ||||||    
T  43187385 ttcatgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 163 - 479
Target Start/End: Original strand, 7993024 - 7993336
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||| |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||           
T  7993024 ggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 7993123  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    |||| ||| ||||||||||||| |      ||||  |||||       || ||| |||||||||  || ||| || |||||||       ||||  ||||    
T  7993124 gtctcgtggtattcaatcaagact------ctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggt 7993217  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||||||||||||| ||||||||   ||||||||||||| ||||||||||| || || ||||||| || ||||||||||||||    
T  7993218 attcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttca 7993317  T
Q  461 tgaaaacatgagatttctt 479  Q
    |||||| || |||||||||    
T  7993318 tgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 351 - 479
Target Start/End: Complemental strand, 28034939 - 28034811
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||| ||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| ||  |||    
T  28034939 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaa 28034840  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  28034839 aagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 357 - 476
Target Start/End: Original strand, 33382709 - 33382828
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtct 456  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||||||||    
T  33382709 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 33382808  T
Q  457 ttcatgaaaacatgagattt 476  Q
    || ||||||| |||||||||    
T  33382809 tttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 8078284 - 8078376
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  8078284 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattt 8078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 8675399 - 8675527
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||| ||| ||||||||||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||    
T  8675399 gtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 8675498  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    || ||||| ||||||| ||||||||||||    
T  8675499 aaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 163 - 283
Target Start/End: Original strand, 34695120 - 34695241
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||           
T  34695120 gggggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 34695219  T
Q  262 gtcttgtgttattcaatcaaga 283  Q
    |||||||| |||||||||||||    
T  34695220 gtcttgtggtattcaatcaaga 34695241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 351 - 486
Target Start/End: Original strand, 12740439 - 12740573
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||| |||||||||||||||| || || ||||||| || || |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  451 aagtctttcatgaaaacatgagatttcttaggattg 486  Q
    ||||||||||| |||| ||||||||||||| |||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 356 - 455
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||   ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 163 - 486
Target Start/End: Original strand, 9179765 - 9180071
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    ||||||||||||||| |  |||||||  |||||||||||||||||||||||||||||||||||||| ||||| ||   |||||||| ||| ||           
T  9179765 gggggtgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattcgat---gactctttgcaacttaaacaaa 9179861  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
       ||||  |||||||||||||||      |||| ||||||       ||||||| ||||||||  ||||||||| |||||||       |||| |||||    
T  9179862 aatttgtaatattcaatcaagatt------ctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggt 9179955  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    || |||||||| | ||||| ||||||||||| ||||||||          ||||||||||||||||||||| |||| ||||||||| |||||||||||||    
T  9179956 atacaaaatcacttaaattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttca 9180045  T
Q  461 tgaaaacatgagatttcttaggattg 486  Q
    ||||||||||||||||||||||||||    
T  9180046 tgaaaacatgagatttcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 162 - 486
Target Start/End: Complemental strand, 3797376 - 3797066
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||| ||| |||||||||||| ||||||||||||||||| || |||||| ||| ||| | ||||||||||||||||||| ||||||          
T  3797376 gggggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaaa 3797277  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||| | || ||||||||||||| |      |||| ||||||       || ||| |||||||||  |||||| || |||||||       |||| ||||    
T  3797276 agtcatctgatattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgg 3797183  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    ||||||| |||||| |||||| |||||||||| |||||||| ||||||||||||         ||||||||| ||||||||||||||||||||||||||     
T  3797182 tattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgg---------gattttctagtgaaattttagcatgaaaaagtctttt 3797092  T
Q  460 atgaaaacatgagatttcttaggattg 486  Q
    | |||||||| ||||||||||||||||    
T  3797091 aagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 165 - 283
Target Start/End: Complemental strand, 39219651 - 39219531
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt-nnnnnnng 262  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||        |    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaag 39219552  T
Q  263 tcttgtgttattcaatcaaga 283  Q
    |||||||||||||||||||||    
T  39219551 tcttgtgttattcaatcaaga 39219531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  371 attcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatg 470  Q
    ||||||||||||||||||| | ||||||||  ||||||||||||||||| |||||||| || || ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  471 agatttctt 479  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 43679363 - 43679451
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaaga-cttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaattt 254  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 181 - 485
Target Start/End: Original strand, 19251439 - 19251729
Alignment:
Q  181 gattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatc 279  Q
    ||||||||  |||||||||||||||||| || | ||||||||||||| |||||||||||||||||||| ||| ||       |||||||| |||||||||    
T  19251439 gattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatc 19251538  T
Q  280 aagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 378  Q
    |||| |      |||| ||||||       || ||| |||||||||  || | | || |||||||       |||| |||||||||||||||||||||||    
T  19251539 aagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaat 19251632  T
Q  379 ttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 478  Q
    ||||||||||||| ||||||||          |||||||||  |||||||||  |||||||||||||  |||||||||||||||||||| ||| ||||||    
T  19251633 ttcgaaggattgtttaataaat----------tggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttct 19251722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 360 - 479
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||| || |||||| ||||||||          |||||||||||| |||||||| |||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  460 atgaaaacatgagatttctt 479  Q
    ||||||||||||||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  371 attcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatg 470  Q
    ||||||| || |||||||||| ||||||||  |||||||||||||||||||||||| | || || ||||||| || ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  471 agatttctt 479  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 476
Target Start/End: Complemental strand, 44256895 - 44256775
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||  ||||| |||| ||||||| |||||||  | || ||||||| || ||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  456 tttcatgaaaacatgagattt 476  Q
    |||||| |||| |||||||||    
T  44256795 tttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 356 - 508
Target Start/End: Complemental strand, 1470362 - 1470213
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||| |||||||||  ||| ||||| |||| ||| |||||||||| | |||||||||||||||| || |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  456 tttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttac 508  Q
    |||  |||||||  |||||||| ||| ||||       |||||||||||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttac 1470213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 351 - 451
Target Start/End: Original strand, 32883848 - 32883948
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| || |||||  ||||||||||||||| |||||||||| || || ||||||| || ||||    
T  32883848 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaa 32883947  T
Q  451 a 451  Q
    |    
T  32883948 a 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 356 - 420
Target Start/End: Complemental strand, 44122029 - 44121965
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  44122029 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 442
Target Start/End: Complemental strand, 10676546 - 10676463
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaatttta 442  Q
    ||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| ||| |||||||  ||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 190 - 420
Target Start/End: Original strand, 37327836 - 37328062
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatt 288  Q
    ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||       |||||||| ||||||||||||| |       
T  37327836 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact--- 37327932  T
Q  289 tatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagga 387  Q
       |||| ||||||       || ||| |||||||||  |||||| || || ||||       |||| |||||||||||||||||||||||||| |||||    
T  37327933 ---ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaagga 37328029  T
Q  388 ttgtataataaatcagattttgatggattttgt 420  Q
    |||| ||||||||   |||||||||||||||||    
T  37328030 ttgtttaataaattgaattttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 509722 - 509840
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||| |          ||  |||||| || ||||    
T  509722 gtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttgtag----------tgggattttaacaagaaa 509811  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||| ||||||||||||    
T  509812 aagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 40460841 - 40460772
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||    
T  40460841 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 31401585 - 31401645
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtc 223  Q
    |||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||    
T  31401585 gggggtgtattggatcatgattctaaagaactttaaaagacttttttatcatgaaaaagtc 31401645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 162 - 409
Target Start/End: Complemental strand, 17001342 - 17001099
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||   |||||||||| ||||||| || |||||||||||||||| ||||||||||||||| ||| ||| ||          
T  17001342 gggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 17001243  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| ||||||||||||| |      |||| ||||||       || ||| ||||||||| ||||||| || |||||||        | | ||||    
T  17001242 agtcttgtggtattcaatcaagact------ctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtgg 17001149  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  17001148 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 351 - 422
Target Start/End: Complemental strand, 46405565 - 46405494
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgg 422  Q
    |||| |||||||||||||||||||||||||| || |||||| ||||||||  ||||||||||||||||||||    
T  46405565 gtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 48117912 - 48117790
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| |  ||||||  ||||||||||||||||||| || ||||||||||||||| |||||||||||||||| ||| ||| ||          
T  48117912 gggggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaa 48117813  T
Q  261 ngtcttgtgttattcaatcaaga 283  Q
     |||||||| |||||||||||||    
T  48117812 agtcttgtggtattcaatcaaga 48117790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 183 - 283
Target Start/End: Complemental strand, 10676676 - 10676575
Alignment:
Q  183 ttctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaa 281  Q
    |||||| ||||||||||||||||||| || |||||||| |||||| ||||| |||||||||||||| ||||||       |||||||| |||||||||||    
T  10676676 ttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaa 10676577  T
Q  282 ga 283  Q
    ||    
T  10676576 ga 10676575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 357 - 420
Target Start/End: Original strand, 29585586 - 29585649
Alignment:
Q  357 tggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||||||||||||||||||||||| |||||||||| |||||| |  ||||||||||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 29893004 - 29893090
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||| ||| | |||||||   |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  29893004 gggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 29893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 43187662 - 43187576
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||||   |||||||  |||||||||||||||||| || |||||| |||||||| ||||||||||||||||||||    
T  43187662 gggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactcttt 43187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttg 409  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 509580 - 509661
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | |||| ||  ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  509580 ggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 509661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 10617026 - 10617102
Alignment:
Q  393 taataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacat 469  Q
    |||||||| |||||||||||||||||||| ||||||||| ||| ||||||| |  || ||||||||||| |||||||    
T  10617026 taataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Original strand, 3634238 - 3634292
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  3634238 ggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 3634292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 18838270 - 18838352
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||| |||||||||| | |||||||  ||||| ||||||||||||| || ||||||| ||||||| ||||||||||||||||    
T  18838270 gggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagact 18838352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 21067763 - 21067845
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||| |||||||||| | |||||||   |||||||||||| ||||| || ||||||||||||||| ||||||||||||||||    
T  21067763 gggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagact 21067845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 33892384 - 33892315
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| ||||||||||||||||||||||||||||| ||||||  |||||||  |||||| ||| |||||||    
T  33892384 gtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 39028163 - 39028232
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| ||| ||||||||||| |||||||| |||| |||||| ||||||||  ||||||||||||||||||    
T  39028163 gtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 41827223 - 41827317
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||| | ||| ||| ||       |||||||| |||||||||||||    
T  41827223 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtcttgtggtattcaatcaaga 41827317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 12963611 - 12963704
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    |||||||||||||||||| || | ||||||||||||| ||| |||||||||||||||| ||| ||       |||||||| |||||||||||||    
T  12963611 gattttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaaga 12963704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 32883662 - 32883738
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatc 237  Q
    ||||| |||||||||| |||||||||  ||||||||||||| ||||| || |||||||||| ||||| |||||||||    
T  32883662 gggggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatc 32883738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 39028008 - 39028060
Alignment:
Q  192 attttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  39028008 attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 39028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggat 415  Q
    |||||||| |||||||||||||||||||| |||||| |||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 1470791 - 1470735
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgtgtattcaatcaagactcttttcaa 251  Q
    |||||||||||| ||||||||     |||||||||||||||||||||||||||||||||||    
T  1470791 gattttaaaagatttttttat----taaaagtcttgtgtattcaatcaagactcttttcaa 1470735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 476
Target Start/End: Complemental strand, 44623357 - 44623295
Alignment:
Q  414 attttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 476  Q
    ||||||||| |||||||| ||||||||||| |||||||||||| |||| |||| |||| ||||    
T  44623357 attttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 46405742 - 46405660
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    |||||||| | |||||||  | ||||||||||||||||| || ||||||||||| ||| |||||||||||||||| ||| |||    
T  46405742 tattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaa 46405660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 33382547 - 33382600
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||| || ||||||||||||| | ||||||||||||||||    
T  33382547 gattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagact 33382600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 33892569 - 33892492
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||| |||||||||| | |||||||   |||||||||||||||||| || |||||||||| |||| ||||||||||||    
T  33892569 ggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaa 33892492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 47066631 - 47066712
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatg-aaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    |||||||||| | |||||||  |||||| |||||||||||| || ||| |||||||||||| |||||||||||| |||||||    
T  47066631 tgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactcttt 47066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 191 - 283
Target Start/End: Complemental strand, 40460997 - 40460904
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaaga 283  Q
    |||||||||||||||||| || |||||||||| |||| ||||| |||||||||| ||| ||||||       |||||||| |||||||| ||||    
T  40460997 gattttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaaga 40460904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 170 - 247
Target Start/End: Original strand, 29585446 - 29585524
Alignment:
Q  170 tattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| || |||||||||   |||||||||||| ||||| || |||||||||| |||| |||||||||||||| |||||    
T  29585446 tattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattcttt 29585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 46037409 - 46037355
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||| | ||| |||||||||||||||    
T  46037409 ggattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagact 46037355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 34115531 - 34115478
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||| || || ||||| |||||| ||||||||||||||||    
T  34115531 gattttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagact 34115478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 151855 - 151935
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaaga 241  Q
    ||||||||||||||||   ||||  || |||||||||||||||||||| |  |  |||||||||||| |||||||||||||    
T  151855 ggggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaaga 151935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 17001081 - 17001049
Alignment:
Q  447 gaaaaagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||||||| ||||||||||||    
T  17001081 gaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 44122214 - 44122142
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaa 239  Q
    |||||||||| |  ||||||  ||||||||||||| ||||| || |||||||||| |||| ||||||||||||    
T  44122214 tgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaa 44122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 174; Significance: 3e-93; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 15350 - 15009
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||          
T  15350 ggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 15254  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||| ||||||||  |||||||||||||||||       |||||||||    
T  15253 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 15160  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15159 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 15060  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||| ||||||||||||||       |||||||||||||||||    
T  15059 atgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 174; Significance: 3e-93; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 162 - 510
Target Start/End: Complemental strand, 15993 - 15652
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||          
T  15993 ggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaa 15897  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtgg 359  Q
     ||||||||||||||||||||||||      |||| ||||||       || |||| ||||||||  |||||||||||||||||       |||||||||    
T  15896 agtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtgg 15803  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttc 459  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15802 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 15703  T
Q  460 atgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||| ||||||||||||||       |||||||||||||||||    
T  15702 atgaaaacatgaaatttcttaggattgtttttttcttttaagattttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 157; Significance: 4e-83; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 163 - 483
Target Start/End: Original strand, 100099 - 100415
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnn 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||| || |||| ||||||           
T  100099 gggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaa 100198  T
Q  262 gtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggt 360  Q
    ||||||||||||||||||||||||      |||| ||||||       || |||||||| ||||  |||||||||||||||||       ||||||||||    
T  100199 gtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggt 100292  T
Q  361 attcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttca 460  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||| || ||||||||||||||    
T  100293 attcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttca 100392  T
Q  461 tgaaaacatgagatttcttagga 483  Q
    |||||||||||||||||||||||    
T  100393 tgaaaacatgagatttcttagga 100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 313 - 510
Target Start/End: Complemental strand, 38778 - 38581
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  38778 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgat 38680  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgnnnnnnncttttaagattttacta 510  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  38679 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttacta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 38837 - 38755
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactctt 246  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 122; Significance: 3e-62; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 313 - 486
Target Start/End: Complemental strand, 39069 - 38895
Alignment:
Q  313 ttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    ||||||||||||| ||||||||||||||||||       |||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  39069 ttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgat 38970  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  38969 ggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 39172 - 39087
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  39172 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttt 39087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 118; Significance: 7e-60; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 313 - 486
Target Start/End: Original strand, 102128 - 102302
Alignment:
Q  313 ttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgat 411  Q
    |||||||||||||  |||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  102128 ttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgat 102227  T
Q  412 ggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||| |||||    
T  102228 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 102026 - 102108
Alignment:
Q  165 gggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttt 247  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |  ||||||| ||||| ||||||||||||| |||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttatta-aaaaaagttttgtgttattcaatcaagattcttt 102108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 107; Significance: 3e-53; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 215 - 485
Target Start/End: Complemental strand, 806 - 540
Alignment:
Q  215 gaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttt 313  Q
    |||||||||||||| ||||||||||||||||||| ||||||       ||||||||||||||||||||||||      |||| ||||||       || |    
T  806 gaaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagatt------ctttgtcatttaaaaaaagtat 713  T
Q  314 tgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatg 412  Q
    ||||||||||||  || ||||||||||||||        | ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||    
T  712 tgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatg 613  T
Q  413 gattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 485  Q
    |||||||||| |||||||| ||||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  612 gattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 168 - 479
Target Start/End: Original strand, 10453 - 10760
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| ||||||       |||||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10552  T
Q  267 gtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaaa-aagactcttaatcacttnnnnnnngtctagtggtattca 365  Q
    ||| ||||||||||||| |      |||| ||||||       || ||| |||||||||  ||||||  | |||| ||        ||| ||||||||||    
T  10553 gtggtattcaatcaagact------ctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattca 10646  T
Q  366 aaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaa 465  Q
    |||||||||||||||| ||||||||| ||||||||   ||||||||||||||| ||||||||| || || ||||||| || |||||||||||||||||||    
T  10647 aaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 10746  T
Q  466 acatgagatttctt 479  Q
    | ||||||||||||    
T  10747 agatgagatttctt 10760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 39747 - 39624
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    |||||||||||||||||||||| ||||||||||| | ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| || |||||||||    
T  39647 tttcatgaaaagataagatttctt 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 39908 - 39847
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaa 251  Q
    ||||||||||||| |||| || ||||||||||||||| |||||||||||||||| ||| |||    
T  39908 gattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaa 39847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 358 - 479
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  358 ggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctt 457  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  458 tcatgaaaacatgagatttctt 479  Q
    ||||||||| || |||||||||    
T  36935 tcatgaaaagataagatttctt 36914  T

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Target: scaffold0054; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 190 - 247
Target Start/End: Complemental strand, 37115 - 37057
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagactcttt 247  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  37115 ggattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactcttt 37057  T

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Target: scaffold1504 (Bit Score: 73; Significance: 5e-33; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 351 - 479
Target Start/End: Original strand, 936 - 1063
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 450  Q
    |||| |||||||||||||||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| || || ||||||| |  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  451 aagtctttcatgaaaacatgagatttctt 479  Q
    ||||||||||| |||| ||||||||||||    
T  1035 aagtctttcattaaaatatgagatttctt 1063  T

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Target: scaffold1504; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 283
Target Start/End: Original strand, 756 - 872
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtctt 266  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||| |||||| |||||||||||||||| ||| ||| ||       |||||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 855  T
Q  267 gtgttattcaatcaaga 283  Q
    ||| |||||||||||||    
T  856 gtggtattcaatcaaga 872  T

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Target: scaffold0042 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 356 - 479
Target Start/End: Complemental strand, 58206 - 58083
Alignment:
Q  356 gtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtc 455  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||||||||||||||| || |  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  456 tttcatgaaaacatgagatttctt 479  Q
    ||||||||||| ||||||||||||    
T  58106 tttcatgaaaagatgagatttctt 58083  T

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Target: scaffold0042; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 58353 - 58272
Alignment:
Q  163 gggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||| |||||||||| | ||||| |  ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  58353 ggggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 58272  T

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Target: scaffold0651 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 8654 - 8773
Alignment:
Q  167 gtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnnngtct 265  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||||||||       ||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 8753  T
Q  266 tgtgttattcaatcaagatt 285  Q
    ||||||||| ||||||||||    
T  8754 tgtgttatttaatcaagatt 8773  T

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Target: scaffold0922 (Bit Score: 51; Significance: 7e-20; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 162 - 416
Target Start/End: Original strand, 4087 - 4337
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttttcaatttnnnnnn 260  Q
    ||||| |||||||||| | |||||||  ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||| ||| ||| ||          
T  4087 gggggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaa 4186  T
Q  261 ngtcttgtgttattcaatcaagattatttatctttatcatttnnnnnnngttttgtggtattcaa-aaagactcttaatcacttnnnnnnngtctagtgg 359  Q
     |||||||| |||||||||||||       ||||| | ||||       || ||| |||||||||  |||||| || |||| ||       |||| ||||    
T  4187 agtcttgtggtattcaatcaaga------ctctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgg 4280  T
Q  360 tattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggatt 416  Q
    ||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||    
T  4281 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 411 - 486
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  411 tggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 486  Q
    |||||||||||||||||| || || ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 14811 - 14864
Alignment:
Q  191 gattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagact 243  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  14811 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 14864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 13811 - 13897
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  13811 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 13897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 420
Target Start/End: Original strand, 13954 - 14023
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| |||||||||||||||||||||||||| || |||||| ||||||||  ||||||||||||||||||    
T  13954 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 14023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 479
Target Start/End: Original strand, 14040 - 14072
Alignment:
Q  447 gaaaaagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||||||| ||||||||||||    
T  14040 gaaaaagtctttcatgaaaagatgagatttctt 14072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 47; Significance: 2e-17; HSPs: 4)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 162 - 247
Target Start/End: Complemental strand, 21516 - 21430
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaagactcttt 247  Q
    ||||| |||||||||| | |||||||   |||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  21516 gggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 21430  T

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Target: scaffold0152; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 420
Target Start/End: Complemental strand, 21373 - 21304
Alignment:
Q  351 gtctagtggtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgt 420  Q
    |||| |||||||||||||||||||||||||| || |||||| ||||||||  ||||||||||||||||||    
T  21373 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 479
Target Start/End: Complemental strand, 21287 - 21255
Alignment:
Q  447 gaaaaagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||||||| ||||||||||||    
T  21287 gaaaaagtctttcatgaaaagatgagatttctt 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 447 - 479
Target Start/End: Original strand, 28510 - 28542
Alignment:
Q  447 gaaaaagtctttcatgaaaacatgagatttctt 479  Q
    |||||||||||||||||||| ||||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttctt 28542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 380 - 466
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  380 tcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatgaaaa 466  Q
    ||||| |||||| ||||||||  |||||||||||||||||||||||||| || || ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 11847 - 11793
Alignment:
Q  190 ggattttaaaagacttttttatcatgaaaaagtcttgtg-tattcaatcaagact 243  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  11847 ggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagact 11793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 34; Significance: 0.0000000009; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 12087 - 12030
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtctt 225  Q
    |||||||||| | |||||||  ||||||||||||||||||| || |||||||||||||    
T  12087 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Original strand, 11999 - 12056
Alignment:
Q  168 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtctt 225  Q
    |||||||||| | |||||||  ||||||||||||||||||| || || ||||||||||    
T  11999 tgtattggattaggattctatgggattttaaaagactttttcataattaaaaagtctt 12056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  359 gtattcaaaatcattcaaatttcgaaggattgtataataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaa 452  Q
    ||||| |||||||||||||||| ||| || ||| ||||||||   |||||||| ||||||||| |||||| || ||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 81869 - 81789
Alignment:
Q  162 ggggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgt-gtattcaatcaaga 241  Q
    ||||||||||||||||   |||| ||| |||||||||||||||||||| |  |  ||||||||||| ||||||||||||||    
T  81869 ggggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaga 81789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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