View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21120_low_37 (Length: 446)

Name: NF21120_low_37
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21120_low_37
NF21120_low_37
[»] scaffold0110 (1 HSPs)
scaffold0110 (2-435)||(28642-29076)
[»] chr5 (91 HSPs)
chr5 (124-252)||(31084310-31084438)
chr5 (130-257)||(19579683-19579816)
chr5 (124-257)||(21576694-21576822)
chr5 (124-257)||(43001782-43001915)
chr5 (174-252)||(3966490-3966568)
chr5 (132-238)||(30502345-30502446)
chr5 (132-238)||(30542688-30542789)
chr5 (124-229)||(14873527-14873632)
chr5 (180-257)||(16203795-16203872)
chr5 (179-252)||(11685926-11685999)
chr5 (124-257)||(21191005-21191133)
chr5 (177-238)||(36838544-36838605)
chr5 (130-246)||(15382470-15382589)
chr5 (130-246)||(28588629-28588740)
chr5 (177-239)||(6471886-6471948)
chr5 (131-241)||(7677703-7677819)
chr5 (176-257)||(13287395-13287476)
chr5 (176-257)||(21522732-21522813)
chr5 (176-257)||(21533298-21533379)
chr5 (165-246)||(39205873-39205954)
chr5 (176-252)||(6035470-6035545)
chr5 (180-252)||(6247609-6247681)
chr5 (176-252)||(39698528-39698604)
chr5 (175-239)||(41091252-41091316)
chr5 (170-252)||(2436909-2436991)
chr5 (176-242)||(18592070-18592136)
chr5 (176-246)||(21814254-21814324)
chr5 (125-231)||(23015934-23016040)
chr5 (195-245)||(27932229-27932279)
chr5 (124-246)||(6401491-6401619)
chr5 (176-257)||(15410444-15410525)
chr5 (184-257)||(24906305-24906378)
chr5 (187-252)||(27144450-27144515)
chr5 (176-241)||(32766939-32767004)
chr5 (185-257)||(14674251-14674323)
chr5 (193-257)||(22013396-22013460)
chr5 (189-265)||(24273039-24273114)
chr5 (189-265)||(24389100-24389175)
chr5 (197-264)||(4344717-4344784)
chr5 (169-252)||(10298556-10298639)
chr5 (177-257)||(16734848-16734930)
chr5 (179-246)||(41633728-41633795)
chr5 (195-257)||(6326312-6326374)
chr5 (180-246)||(8420020-8420086)
chr5 (180-246)||(32630735-32630801)
chr5 (168-262)||(38749551-38749645)
chr5 (124-246)||(42029745-42029862)
chr5 (187-252)||(12264836-12264901)
chr5 (176-241)||(37328840-37328905)
chr5 (181-246)||(42893353-42893418)
chr5 (124-252)||(17123035-17123157)
chr5 (176-264)||(21351901-21351989)
chr5 (176-232)||(22423808-22423864)
chr5 (130-246)||(30098993-30099104)
chr5 (180-231)||(2548395-2548446)
chr5 (174-257)||(3751924-3752006)
chr5 (180-239)||(18421841-18421900)
chr5 (146-233)||(23012379-23012461)
chr5 (124-246)||(35017030-35017153)
chr5 (124-233)||(17593672-17593775)
chr5 (176-257)||(19552541-19552620)
chr5 (182-252)||(19737484-19737554)
chr5 (180-257)||(19820396-19820471)
chr5 (176-242)||(21542027-21542093)
chr5 (180-246)||(33178018-33178084)
chr5 (180-246)||(34879343-34879409)
chr5 (180-257)||(43564865-43564940)
chr5 (186-255)||(7997172-7997241)
chr5 (175-252)||(16374337-16374414)
chr5 (170-227)||(41558644-41558701)
chr5 (130-230)||(26312778-26312873)
chr5 (181-257)||(36642763-36642839)
chr5 (176-246)||(38816692-38816761)
chr5 (177-257)||(41600880-41600960)
chr5 (180-231)||(17925172-17925223)
chr5 (184-239)||(39758272-39758327)
chr5 (176-231)||(40211964-40212019)
chr5 (182-240)||(23220982-23221040)
chr5 (139-233)||(28473939-28474032)
chr5 (174-252)||(30098313-30098391)
chr5 (186-240)||(31264437-31264491)
chr5 (170-228)||(43208264-43208322)
chr5 (180-241)||(2577180-2577241)
chr5 (186-231)||(5467984-5468029)
chr5 (181-246)||(12927647-12927712)
chr5 (180-244)||(15883982-15884047)
chr5 (186-231)||(25863212-25863257)
chr5 (179-240)||(28296327-28296388)
chr5 (195-252)||(41995458-41995515)
chr5 (176-228)||(4991373-4991424)
chr5 (175-227)||(32444778-32444830)
[»] chr1 (115 HSPs)
chr1 (130-246)||(1486659-1486775)
chr1 (130-257)||(19562570-19562698)
chr1 (128-257)||(38078614-38078738)
chr1 (176-257)||(5376496-5376577)
chr1 (124-246)||(9828037-9828165)
chr1 (124-244)||(5898215-5898330)
chr1 (174-258)||(6427331-6427415)
chr1 (124-264)||(22515836-22515971)
chr1 (124-257)||(38503302-38503439)
chr1 (181-252)||(36878448-36878519)
chr1 (130-239)||(40181871-40181975)
chr1 (189-265)||(12443469-12443545)
chr1 (169-257)||(34712372-34712460)
chr1 (124-252)||(37598819-37598941)
chr1 (182-241)||(1864882-1864941)
chr1 (124-252)||(47989485-47989618)
chr1 (176-246)||(113292-113362)
chr1 (176-246)||(6612167-6612237)
chr1 (170-240)||(20157340-20157410)
chr1 (175-232)||(7918206-7918263)
chr1 (177-254)||(10572586-10572663)
chr1 (176-229)||(44482240-44482293)
chr1 (181-257)||(2896122-2896198)
chr1 (130-252)||(5944268-5944398)
chr1 (180-252)||(13436445-13436517)
chr1 (176-244)||(25361881-25361949)
chr1 (176-252)||(40285650-40285726)
chr1 (180-244)||(41877470-41877534)
chr1 (187-257)||(398772-398842)
chr1 (176-246)||(17754304-17754374)
chr1 (186-252)||(17831537-17831603)
chr1 (176-246)||(24577182-24577252)
chr1 (177-239)||(34371714-34371775)
chr1 (180-257)||(9709802-9709879)
chr1 (181-246)||(23636050-23636115)
chr1 (180-257)||(46348383-46348460)
chr1 (180-257)||(52903231-52903308)
chr1 (182-246)||(21378571-21378635)
chr1 (180-252)||(22881616-22881688)
chr1 (180-244)||(39953146-39953210)
chr1 (175-246)||(1704987-1705058)
chr1 (130-241)||(40258888-40258994)
chr1 (195-257)||(1262866-1262928)
chr1 (130-252)||(1815244-1815361)
chr1 (186-252)||(3490396-3490462)
chr1 (124-246)||(10577684-10577801)
chr1 (182-252)||(13997870-13997940)
chr1 (124-230)||(18337338-18337439)
chr1 (180-246)||(19058856-19058922)
chr1 (166-244)||(23714691-23714768)
chr1 (188-242)||(25098563-25098617)
chr1 (177-239)||(25272482-25272544)
chr1 (185-243)||(31015039-31015097)
chr1 (180-246)||(38075970-38076036)
chr1 (132-246)||(40917744-40917862)
chr1 (130-239)||(18190063-18190167)
chr1 (176-233)||(21038089-21038146)
chr1 (138-231)||(28674808-28674896)
chr1 (180-257)||(42359449-42359526)
chr1 (181-257)||(6415002-6415078)
chr1 (176-240)||(9629896-9629960)
chr1 (180-232)||(14332642-14332694)
chr1 (181-253)||(27471567-27471639)
chr1 (180-252)||(31672895-31672967)
chr1 (185-257)||(48450592-48450664)
chr1 (189-240)||(19324561-19324612)
chr1 (182-241)||(23738676-23738735)
chr1 (180-246)||(24334705-24334772)
chr1 (182-240)||(24462678-24462737)
chr1 (182-241)||(26238115-26238173)
chr1 (180-231)||(39130767-39130818)
chr1 (135-246)||(43492454-43492560)
chr1 (180-262)||(7353493-7353575)
chr1 (182-232)||(10233260-10233310)
chr1 (175-257)||(12993176-12993258)
chr1 (134-239)||(17778549-17778653)
chr1 (181-238)||(25452151-25452206)
chr1 (180-246)||(29163381-29163447)
chr1 (187-257)||(32724105-32724175)
chr1 (174-252)||(36905984-36906062)
chr1 (204-253)||(609482-609531)
chr1 (124-246)||(25934609-25934737)
chr1 (180-221)||(30749858-30749899)
chr1 (180-221)||(30771309-30771350)
chr1 (193-246)||(34298429-34298482)
chr1 (169-257)||(35919265-35919358)
chr1 (176-241)||(44296491-44296555)
chr1 (174-257)||(15641026-15641107)
chr1 (124-257)||(18556394-18556533)
chr1 (180-239)||(29229461-29229521)
chr1 (195-257)||(13011230-13011293)
chr1 (195-246)||(14359537-14359587)
chr1 (181-252)||(16927186-16927257)
chr1 (186-241)||(39101188-39101243)
chr1 (186-233)||(49872843-49872890)
chr1 (180-242)||(51410021-51410084)
chr1 (177-239)||(6332671-6332732)
chr1 (176-234)||(8010283-8010341)
chr1 (200-246)||(10474997-10475043)
chr1 (199-257)||(21366039-21366097)
chr1 (160-246)||(21530682-21530763)
chr1 (170-231)||(31511970-31512036)
chr1 (195-233)||(37055871-37055909)
chr1 (187-241)||(40747780-40747834)
chr1 (177-211)||(48148034-48148068)
chr1 (180-252)||(9690274-9690344)
chr1 (198-247)||(23621963-23622012)
chr1 (187-252)||(23622305-23622370)
chr1 (186-231)||(24176373-24176418)
chr1 (195-244)||(29144373-29144422)
chr1 (182-239)||(30847722-30847779)
chr1 (181-241)||(2784554-2784614)
chr1 (180-252)||(9103627-9103698)
chr1 (180-240)||(19637767-19637827)
chr1 (183-231)||(42325568-42325616)
[»] chr6 (114 HSPs)
chr6 (130-257)||(12696306-12696433)
chr6 (124-244)||(17327599-17327719)
chr6 (124-252)||(10770616-10770746)
chr6 (124-246)||(18367829-18367957)
chr6 (130-257)||(3398601-3398727)
chr6 (170-257)||(9027160-9027247)
chr6 (176-258)||(26562670-26562752)
chr6 (124-246)||(34595127-34595244)
chr6 (131-252)||(7265549-7265665)
chr6 (170-239)||(9025484-9025553)
chr6 (176-257)||(9107366-9107447)
chr6 (124-252)||(7996331-7996450)
chr6 (124-252)||(8022351-8022470)
chr6 (176-252)||(16766684-16766760)
chr6 (180-256)||(19040335-19040411)
chr6 (176-247)||(8931598-8931669)
chr6 (130-257)||(28152081-28152202)
chr6 (180-246)||(7977830-7977896)
chr6 (169-246)||(7086788-7086865)
chr6 (124-257)||(8365457-8365596)
chr6 (180-255)||(7801156-7801231)
chr6 (182-257)||(9658861-9658936)
chr6 (180-246)||(9629376-9629442)
chr6 (124-254)||(10339063-10339200)
chr6 (174-252)||(19044451-19044529)
chr6 (176-246)||(20576629-20576699)
chr6 (124-257)||(17841538-17841666)
chr6 (176-233)||(34073343-34073400)
chr6 (180-252)||(5732510-5732582)
chr6 (181-257)||(13851718-13851794)
chr6 (180-244)||(21924935-21924999)
chr6 (181-252)||(7938103-7938174)
chr6 (127-246)||(9024123-9024242)
chr6 (177-232)||(9195751-9195806)
chr6 (124-239)||(24138426-24138541)
chr6 (180-246)||(7377972-7378038)
chr6 (124-257)||(8776917-8777050)
chr6 (176-246)||(16488586-16488656)
chr6 (180-246)||(20371110-20371176)
chr6 (180-246)||(33001289-33001355)
chr6 (177-242)||(10294104-10294169)
chr6 (124-264)||(32978848-32978984)
chr6 (179-231)||(9617442-9617494)
chr6 (181-257)||(15489733-15489809)
chr6 (174-246)||(21395302-21395373)
chr6 (185-257)||(31959141-31959213)
chr6 (174-253)||(34290073-34290150)
chr6 (189-253)||(1532224-1532290)
chr6 (181-256)||(13360373-13360448)
chr6 (186-252)||(1681745-1681811)
chr6 (179-257)||(6214542-6214620)
chr6 (188-238)||(7569176-7569226)
chr6 (169-246)||(8805563-8805638)
chr6 (182-252)||(16833295-16833365)
chr6 (180-257)||(426514-426591)
chr6 (180-252)||(7027228-7027301)
chr6 (180-244)||(30851597-30851659)
chr6 (185-238)||(30866149-30866202)
chr6 (176-244)||(6665208-6665276)
chr6 (176-252)||(7723246-7723322)
chr6 (186-246)||(10842525-10842585)
chr6 (182-242)||(13364707-13364767)
chr6 (187-251)||(17341671-17341735)
chr6 (169-232)||(20518352-20518416)
chr6 (180-239)||(33817949-33818011)
chr6 (124-246)||(4877935-4878052)
chr6 (180-239)||(28715295-28715354)
chr6 (180-239)||(32511666-32511725)
chr6 (160-211)||(34197139-34197190)
chr6 (180-246)||(853859-853925)
chr6 (176-246)||(5970104-5970174)
chr6 (178-232)||(7151419-7151473)
chr6 (190-252)||(24833243-24833305)
chr6 (186-227)||(11591876-11591917)
chr6 (181-246)||(11784217-11784282)
chr6 (195-256)||(25207747-25207808)
chr6 (177-245)||(28862115-28862184)
chr6 (124-232)||(31384927-31385040)
chr6 (176-257)||(32320665-32320746)
chr6 (194-239)||(34225823-34225868)
chr6 (176-252)||(677824-677900)
chr6 (180-252)||(5626696-5626768)
chr6 (180-252)||(6898281-6898353)
chr6 (175-238)||(9911523-9911587)
chr6 (174-257)||(17302538-17302622)
chr6 (180-231)||(31579227-31579276)
chr6 (180-246)||(3209374-3209441)
chr6 (186-257)||(6389725-6389796)
chr6 (177-228)||(7973665-7973716)
chr6 (176-239)||(10888970-10889033)
chr6 (180-231)||(14721249-14721300)
chr6 (186-233)||(24832594-24832641)
chr6 (176-251)||(32313392-32313467)
chr6 (136-252)||(17168418-17168535)
chr6 (195-257)||(17435181-17435243)
chr6 (182-232)||(26178683-26178733)
chr6 (186-243)||(1191706-1191763)
chr6 (175-252)||(7930292-7930369)
chr6 (215-264)||(10760876-10760925)
chr6 (180-257)||(12627577-12627654)
chr6 (176-257)||(15443677-15443758)
chr6 (174-203)||(21044895-21044924)
chr6 (177-246)||(21068151-21068220)
chr6 (182-231)||(32299283-32299332)
chr6 (186-231)||(34446573-34446618)
chr6 (176-232)||(7248365-7248421)
chr6 (180-252)||(7740628-7740700)
chr6 (176-232)||(9522898-9522954)
chr6 (177-257)||(14796187-14796267)
chr6 (176-232)||(16111753-16111809)
chr6 (187-239)||(17302347-17302399)
chr6 (171-231)||(19147850-19147910)
chr6 (195-231)||(25038086-25038122)
chr6 (176-232)||(33925031-33925087)
[»] chr7 (109 HSPs)
chr7 (124-252)||(5409780-5409908)
chr7 (124-257)||(43027413-43027546)
chr7 (124-257)||(13770673-13770806)
chr7 (181-252)||(22484012-22484083)
chr7 (175-257)||(27945023-27945105)
chr7 (124-257)||(21880134-21880262)
chr7 (130-253)||(32093969-32094094)
chr7 (176-252)||(32308107-32308183)
chr7 (124-239)||(9778500-9778615)
chr7 (130-246)||(24339635-24339757)
chr7 (124-246)||(1433447-1433569)
chr7 (130-252)||(20549778-20549895)
chr7 (180-257)||(24105660-24105737)
chr7 (176-248)||(7328687-7328759)
chr7 (181-257)||(19206032-19206108)
chr7 (170-257)||(18215176-18215263)
chr7 (176-251)||(22602706-22602781)
chr7 (180-247)||(28155562-28155629)
chr7 (170-242)||(5548673-5548745)
chr7 (179-239)||(19992001-19992061)
chr7 (133-257)||(26733286-26733405)
chr7 (181-244)||(5835242-5835305)
chr7 (177-252)||(6630909-6630984)
chr7 (194-257)||(29787383-29787446)
chr7 (180-246)||(25481895-25481961)
chr7 (179-253)||(35861950-35862024)
chr7 (127-221)||(39138462-39138551)
chr7 (170-231)||(16341504-16341565)
chr7 (187-252)||(22868029-22868094)
chr7 (176-252)||(5235973-5236049)
chr7 (180-252)||(9482921-9482993)
chr7 (176-228)||(17307904-17307956)
chr7 (176-232)||(18013070-18013126)
chr7 (176-252)||(26329378-26329454)
chr7 (181-264)||(1401000-1401083)
chr7 (176-239)||(8160416-8160479)
chr7 (184-231)||(27732243-27732290)
chr7 (130-257)||(33994194-33994316)
chr7 (186-257)||(43249975-43250046)
chr7 (170-232)||(7758329-7758391)
chr7 (180-233)||(3721099-3721152)
chr7 (176-253)||(7438692-7438769)
chr7 (124-246)||(25822648-25822776)
chr7 (177-245)||(30731031-30731097)
chr7 (177-246)||(49107814-49107882)
chr7 (132-257)||(10042919-10043046)
chr7 (181-257)||(11061077-11061153)
chr7 (180-252)||(15680796-15680868)
chr7 (176-252)||(15902809-15902885)
chr7 (130-257)||(18212988-18213111)
chr7 (130-198)||(20545199-20545267)
chr7 (180-252)||(21826260-21826332)
chr7 (180-240)||(32287463-32287523)
chr7 (183-246)||(2948676-2948739)
chr7 (180-231)||(4909159-4909210)
chr7 (175-230)||(12843170-12843225)
chr7 (182-233)||(17851437-17851488)
chr7 (181-244)||(23191891-23191954)
chr7 (177-252)||(25791640-25791714)
chr7 (176-235)||(26033457-26033516)
chr7 (182-241)||(27093415-27093474)
chr7 (182-241)||(27184827-27184886)
chr7 (179-241)||(3991322-3991384)
chr7 (170-252)||(5233616-5233698)
chr7 (176-246)||(11665436-11665506)
chr7 (180-246)||(21568622-21568688)
chr7 (200-246)||(24289813-24289859)
chr7 (195-233)||(30813818-30813856)
chr7 (177-231)||(35297669-35297723)
chr7 (124-257)||(598190-598318)
chr7 (137-246)||(8234139-8234243)
chr7 (179-252)||(9408333-9408406)
chr7 (186-231)||(12278843-12278888)
chr7 (171-231)||(21138987-21139044)
chr7 (176-257)||(21828401-21828482)
chr7 (171-252)||(33384573-33384654)
chr7 (155-233)||(2424620-2424696)
chr7 (186-238)||(18233604-18233656)
chr7 (181-233)||(24146822-24146874)
chr7 (181-245)||(37742517-37742581)
chr7 (137-253)||(41020482-41020593)
chr7 (181-212)||(640140-640171)
chr7 (183-246)||(2425736-2425799)
chr7 (183-246)||(3520345-3520408)
chr7 (176-244)||(11272582-11272652)
chr7 (168-231)||(11890907-11890970)
chr7 (175-230)||(19930936-19930991)
chr7 (188-231)||(27363372-27363415)
chr7 (184-231)||(38134410-38134457)
chr7 (181-252)||(42720891-42720962)
chr7 (192-250)||(4880922-4880980)
chr7 (180-246)||(7197297-7197363)
chr7 (175-209)||(9949066-9949100)
chr7 (176-257)||(11072280-11072359)
chr7 (203-257)||(11722121-11722175)
chr7 (187-221)||(11744195-11744229)
chr7 (176-246)||(21140978-21141048)
chr7 (174-252)||(21930616-21930693)
chr7 (177-231)||(23128658-23128712)
chr7 (124-255)||(40287311-40287431)
chr7 (186-231)||(8239056-8239101)
chr7 (182-231)||(23849460-23849509)
chr7 (187-240)||(25239710-25239763)
chr7 (180-240)||(2525844-2525904)
chr7 (154-246)||(3554485-3554572)
chr7 (197-241)||(7133295-7133339)
chr7 (168-212)||(17257977-17258021)
chr7 (176-212)||(18039026-18039062)
chr7 (180-232)||(26022549-26022601)
[»] chr4 (88 HSPs)
chr4 (124-242)||(3947710-3947828)
chr4 (124-246)||(23292935-23293052)
chr4 (124-252)||(36635311-36635440)
chr4 (130-246)||(49431018-49431130)
chr4 (124-249)||(715554-715677)
chr4 (124-249)||(752880-753003)
chr4 (180-244)||(4672085-4672149)
chr4 (178-257)||(30298928-30299008)
chr4 (178-257)||(30327796-30327876)
chr4 (130-252)||(21945490-21945607)
chr4 (165-246)||(12895101-12895182)
chr4 (185-246)||(40613443-40613504)
chr4 (186-246)||(24343500-24343560)
chr4 (180-246)||(2361975-2362041)
chr4 (176-238)||(15659756-15659818)
chr4 (179-252)||(35723383-35723457)
chr4 (124-246)||(5414110-5414238)
chr4 (180-241)||(8423718-8423779)
chr4 (132-257)||(12797295-12797414)
chr4 (176-245)||(13134444-13134513)
chr4 (124-246)||(24613639-24613767)
chr4 (130-239)||(28964203-28964307)
chr4 (124-257)||(35157934-35158062)
chr4 (180-252)||(15029752-15029824)
chr4 (124-233)||(30982816-30982931)
chr4 (180-244)||(54580023-54580087)
chr4 (124-252)||(847938-848072)
chr4 (176-231)||(5775354-5775409)
chr4 (178-257)||(13783263-13783342)
chr4 (188-255)||(20743286-20743353)
chr4 (176-246)||(22234886-22234957)
chr4 (194-265)||(32910525-32910596)
chr4 (176-246)||(46160889-46160959)
chr4 (175-244)||(11596347-11596416)
chr4 (180-257)||(12895274-12895351)
chr4 (187-252)||(14126118-14126183)
chr4 (130-252)||(19482655-19482783)
chr4 (124-246)||(28084514-28084634)
chr4 (130-246)||(16073388-16073498)
chr4 (174-258)||(30838191-30838275)
chr4 (183-238)||(16189710-16189765)
chr4 (189-240)||(22440609-22440660)
chr4 (176-239)||(51701258-51701321)
chr4 (169-239)||(56257933-56258001)
chr4 (190-252)||(903909-903971)
chr4 (193-251)||(1747200-1747258)
chr4 (176-246)||(7012059-7012129)
chr4 (169-211)||(7970547-7970589)
chr4 (194-232)||(17425403-17425441)
chr4 (176-246)||(35952613-35952683)
chr4 (177-231)||(40865035-40865089)
chr4 (181-230)||(9996849-9996898)
chr4 (170-231)||(18513231-18513292)
chr4 (176-229)||(18576033-18576086)
chr4 (165-246)||(32273511-32273592)
chr4 (174-239)||(46083985-46084050)
chr4 (180-252)||(10499270-10499341)
chr4 (169-231)||(19230296-19230360)
chr4 (128-180)||(21345486-21345538)
chr4 (184-240)||(26504303-26504359)
chr4 (182-238)||(29205445-29205501)
chr4 (181-233)||(33950142-33950194)
chr4 (192-232)||(37698719-37698759)
chr4 (176-244)||(40742586-40742654)
chr4 (181-232)||(7214523-7214574)
chr4 (177-252)||(16303263-16303338)
chr4 (177-240)||(38148722-38148785)
chr4 (180-231)||(40179636-40179687)
chr4 (180-246)||(42640519-42640588)
chr4 (188-239)||(46180944-46180995)
chr4 (179-257)||(31800477-31800555)
chr4 (180-246)||(38847012-38847078)
chr4 (179-239)||(3712507-3712568)
chr4 (193-254)||(16402224-16402285)
chr4 (181-230)||(30103358-30103406)
chr4 (195-252)||(40481624-40481680)
chr4 (182-231)||(43299973-43300022)
chr4 (186-231)||(43300624-43300669)
chr4 (177-210)||(44132641-44132674)
chr4 (176-246)||(50280874-50280946)
chr4 (176-252)||(4383355-4383430)
chr4 (177-229)||(5225610-5225662)
chr4 (216-252)||(17345451-17345487)
chr4 (181-209)||(20950428-20950456)
chr4 (187-231)||(22596987-22597031)
chr4 (221-257)||(28720858-28720894)
chr4 (130-174)||(29205528-29205572)
chr4 (187-231)||(31243555-31243599)
[»] chr3 (101 HSPs)
chr3 (124-242)||(27505243-27505361)
chr3 (129-257)||(10954934-10955057)
chr3 (124-252)||(20503452-20503575)
chr3 (176-246)||(8039831-8039901)
chr3 (130-246)||(28917994-28918107)
chr3 (124-254)||(4987229-4987365)
chr3 (124-252)||(5440976-5441103)
chr3 (176-257)||(9800022-9800103)
chr3 (160-252)||(21479105-21479198)
chr3 (180-252)||(25093489-25093561)
chr3 (130-240)||(40993290-40993396)
chr3 (180-246)||(8383250-8383316)
chr3 (124-246)||(35222931-35223048)
chr3 (180-241)||(7928448-7928509)
chr3 (124-246)||(8789497-8789616)
chr3 (124-257)||(55401057-55401185)
chr3 (169-257)||(25948876-25948964)
chr3 (177-252)||(11665931-11666006)
chr3 (176-246)||(16192746-16192816)
chr3 (177-246)||(4990964-4991033)
chr3 (176-241)||(11313796-11313861)
chr3 (176-252)||(14829677-14829752)
chr3 (165-252)||(34307765-34307852)
chr3 (124-252)||(15999959-16000088)
chr3 (186-257)||(24205047-24205118)
chr3 (183-246)||(26508103-26508166)
chr3 (130-246)||(28812508-28812630)
chr3 (179-246)||(34910310-34910377)
chr3 (124-242)||(49651725-49651848)
chr3 (176-246)||(14209106-14209176)
chr3 (181-231)||(20691327-20691377)
chr3 (176-246)||(34185119-34185189)
chr3 (180-246)||(49505154-49505220)
chr3 (180-241)||(7614415-7614476)
chr3 (180-257)||(8587021-8587098)
chr3 (186-231)||(11658823-11658868)
chr3 (196-245)||(14979175-14979224)
chr3 (177-246)||(15796291-15796360)
chr3 (132-257)||(26492162-26492282)
chr3 (124-232)||(29508451-29508560)
chr3 (179-239)||(1509539-1509599)
chr3 (174-246)||(8039199-8039271)
chr3 (132-239)||(10690209-10690321)
chr3 (190-246)||(12704000-12704056)
chr3 (181-257)||(13807151-13807227)
chr3 (176-264)||(14832074-14832162)
chr3 (177-221)||(29386508-29386552)
chr3 (181-239)||(3618881-3618937)
chr3 (181-252)||(10268487-10268558)
chr3 (187-242)||(32804547-32804602)
chr3 (124-252)||(41961588-41961722)
chr3 (180-239)||(51206353-51206412)
chr3 (174-244)||(1550135-1550205)
chr3 (179-241)||(14028005-14028067)
chr3 (180-246)||(18426942-18427008)
chr3 (160-238)||(45451554-45451627)
chr3 (185-246)||(1514610-1514671)
chr3 (180-257)||(4466600-4466677)
chr3 (193-246)||(5407260-5407313)
chr3 (177-246)||(10455783-10455852)
chr3 (181-233)||(11251984-11252034)
chr3 (176-252)||(14747548-14747625)
chr3 (178-239)||(21256984-21257045)
chr3 (196-257)||(21720746-21720807)
chr3 (134-239)||(24633360-24633460)
chr3 (188-257)||(25652039-25652108)
chr3 (179-252)||(26290358-26290431)
chr3 (180-233)||(38731224-38731277)
chr3 (124-212)||(3631711-3631794)
chr3 (191-239)||(9624641-9624689)
chr3 (198-242)||(16789668-16789712)
chr3 (186-242)||(35994744-35994799)
chr3 (204-252)||(40052319-40052367)
chr3 (198-245)||(3164043-3164090)
chr3 (191-246)||(11493372-11493427)
chr3 (177-228)||(15314873-15314924)
chr3 (177-232)||(17005616-17005671)
chr3 (176-239)||(25211539-25211602)
chr3 (177-252)||(28678290-28678365)
chr3 (190-252)||(1438791-1438853)
chr3 (170-231)||(27513652-27513714)
chr3 (181-231)||(40150572-40150622)
chr3 (216-257)||(3865592-3865633)
chr3 (180-257)||(10318035-10318111)
chr3 (180-257)||(10335286-10335363)
chr3 (182-231)||(13799512-13799561)
chr3 (124-205)||(13845474-13845550)
chr3 (174-211)||(16789040-16789077)
chr3 (194-231)||(21211296-21211333)
chr3 (197-246)||(25074782-25074831)
chr3 (180-252)||(25775495-25775568)
chr3 (194-239)||(27277852-27277897)
chr3 (176-257)||(32429376-32429457)
chr3 (186-231)||(52369783-52369828)
chr3 (137-205)||(2941592-2941655)
chr3 (177-257)||(14216874-14216954)
chr3 (177-257)||(14223003-14223083)
chr3 (194-246)||(25064902-25064954)
chr3 (179-211)||(26917298-26917330)
chr3 (174-229)||(27764716-27764772)
chr3 (180-232)||(48353731-48353783)
[»] scaffold0020 (2 HSPs)
scaffold0020 (170-252)||(135302-135384)
scaffold0020 (174-230)||(137789-137845)
[»] chr2 (87 HSPs)
chr2 (177-239)||(44860320-44860382)
chr2 (124-244)||(2438668-2438783)
chr2 (124-252)||(18840962-18841085)
chr2 (195-257)||(21374714-21374776)
chr2 (177-252)||(15909629-15909704)
chr2 (176-246)||(12668419-12668489)
chr2 (130-252)||(20242682-20242799)
chr2 (188-246)||(21616755-21616813)
chr2 (183-257)||(23718008-23718082)
chr2 (183-257)||(24105680-24105754)
chr2 (130-257)||(34784926-34785059)
chr2 (124-246)||(11223802-11223929)
chr2 (177-253)||(21782817-21782891)
chr2 (181-246)||(42832277-42832342)
chr2 (130-257)||(14996174-14996301)
chr2 (176-240)||(24975321-24975385)
chr2 (166-244)||(28677904-28677982)
chr2 (176-239)||(29970545-29970608)
chr2 (138-257)||(30404813-30404927)
chr2 (177-252)||(36756341-36756416)
chr2 (180-242)||(37411244-37411306)
chr2 (180-257)||(15972855-15972932)
chr2 (181-242)||(18276518-18276579)
chr2 (180-252)||(21624253-21624326)
chr2 (180-257)||(37558959-37559036)
chr2 (180-232)||(5367199-5367251)
chr2 (177-257)||(15657846-15657926)
chr2 (182-257)||(31284030-31284106)
chr2 (124-252)||(38117108-38117231)
chr2 (178-257)||(20539672-20539751)
chr2 (170-257)||(24894371-24894458)
chr2 (130-257)||(41843423-41843550)
chr2 (176-246)||(18420430-18420500)
chr2 (182-252)||(31808064-31808134)
chr2 (184-257)||(6940237-6940310)
chr2 (180-257)||(30335399-30335476)
chr2 (176-241)||(30717526-30717591)
chr2 (180-233)||(34691805-34691858)
chr2 (180-233)||(34714217-34714270)
chr2 (180-252)||(896198-896270)
chr2 (186-250)||(10535765-10535829)
chr2 (181-233)||(18889592-18889644)
chr2 (176-252)||(30527591-30527667)
chr2 (180-252)||(31018577-31018649)
chr2 (182-246)||(39279668-39279732)
chr2 (180-250)||(18589187-18589255)
chr2 (180-246)||(19536397-19536464)
chr2 (176-211)||(35056896-35056931)
chr2 (142-246)||(36096331-36096441)
chr2 (166-240)||(974746-974820)
chr2 (174-231)||(2331802-2331857)
chr2 (193-231)||(23921261-23921299)
chr2 (124-246)||(24009289-24009405)
chr2 (177-247)||(28524418-28524488)
chr2 (187-253)||(35449499-35449565)
chr2 (195-257)||(39323246-39323308)
chr2 (180-257)||(18421945-18422022)
chr2 (175-232)||(18622613-18622670)
chr2 (193-246)||(19573971-19574024)
chr2 (196-252)||(27460013-27460070)
chr2 (182-231)||(28121551-28121600)
chr2 (181-226)||(38355888-38355933)
chr2 (182-231)||(44605141-44605190)
chr2 (176-252)||(37419730-37419806)
chr2 (166-229)||(13204035-13204098)
chr2 (180-231)||(18570980-18571031)
chr2 (181-252)||(21091710-21091781)
chr2 (193-252)||(25080887-25080946)
chr2 (194-257)||(28412332-28412395)
chr2 (180-222)||(17124198-17124240)
chr2 (182-252)||(29176495-29176565)
chr2 (176-246)||(33153417-33153487)
chr2 (181-231)||(40361755-40361805)
chr2 (182-231)||(2415325-2415374)
chr2 (180-229)||(27447014-27447063)
chr2 (182-231)||(34006993-34007042)
chr2 (176-253)||(35447883-35447960)
chr2 (169-230)||(44776608-44776669)
chr2 (176-232)||(4207864-4207919)
chr2 (189-257)||(16069263-16069331)
chr2 (174-231)||(22084824-22084883)
chr2 (124-212)||(28596496-28596579)
chr2 (184-232)||(30471045-30471093)
chr2 (176-224)||(32749821-32749869)
chr2 (181-253)||(37497106-37497178)
chr2 (192-252)||(41942092-41942152)
chr2 (179-227)||(45000845-45000893)
[»] chr8 (83 HSPs)
chr8 (130-239)||(16641924-16642033)
chr8 (180-246)||(13844596-13844662)
chr8 (177-249)||(11927083-11927155)
chr8 (177-249)||(11944655-11944727)
chr8 (177-252)||(15816126-15816201)
chr8 (183-246)||(31236580-31236643)
chr8 (182-244)||(7658458-7658520)
chr8 (176-246)||(24362198-24362268)
chr8 (180-246)||(34897078-34897144)
chr8 (124-233)||(3025557-3025661)
chr8 (176-257)||(22651958-22652039)
chr8 (180-252)||(4786338-4786410)
chr8 (178-246)||(39954277-39954345)
chr8 (183-241)||(4611532-4611590)
chr8 (177-239)||(25566841-25566903)
chr8 (124-257)||(926737-926865)
chr8 (180-253)||(22595980-22596053)
chr8 (183-252)||(25192350-25192419)
chr8 (185-246)||(27213540-27213601)
chr8 (176-257)||(29510300-29510381)
chr8 (176-252)||(13436960-13437036)
chr8 (180-252)||(24669420-24669492)
chr8 (175-239)||(25172693-25172757)
chr8 (124-221)||(26902113-26902216)
chr8 (181-240)||(12606830-12606889)
chr8 (181-232)||(14134706-14134757)
chr8 (124-231)||(33405333-33405435)
chr8 (130-257)||(36450709-36450831)
chr8 (124-239)||(40332191-40332301)
chr8 (176-246)||(2572052-2572122)
chr8 (137-251)||(31556985-31557093)
chr8 (179-257)||(36934652-36934730)
chr8 (186-252)||(44067503-44067569)
chr8 (181-250)||(4298887-4298956)
chr8 (176-245)||(14634137-14634206)
chr8 (180-257)||(20873051-20873128)
chr8 (180-257)||(24613503-24613579)
chr8 (124-246)||(29447048-29447176)
chr8 (175-252)||(30271286-30271363)
chr8 (170-231)||(33382009-33382070)
chr8 (177-257)||(11803241-11803321)
chr8 (192-232)||(13203648-13203688)
chr8 (130-246)||(8343309-8343431)
chr8 (188-239)||(14731712-14731763)
chr8 (181-232)||(20679396-20679447)
chr8 (181-252)||(22197743-22197814)
chr8 (174-241)||(28384988-28385055)
chr8 (124-246)||(5813585-5813702)
chr8 (182-252)||(7442832-7442902)
chr8 (179-241)||(8342970-8343032)
chr8 (124-205)||(3951485-3951561)
chr8 (180-257)||(18170482-18170559)
chr8 (180-257)||(18634050-18634127)
chr8 (130-246)||(24858002-24858120)
chr8 (180-257)||(31109518-31109595)
chr8 (175-231)||(4122244-4122300)
chr8 (180-232)||(4948659-4948711)
chr8 (180-212)||(8847283-8847315)
chr8 (216-264)||(26714120-26714168)
chr8 (169-233)||(34222953-34223017)
chr8 (180-231)||(12985400-12985451)
chr8 (176-239)||(34451033-34451096)
chr8 (124-242)||(18407716-18407829)
chr8 (124-239)||(21465412-21465533)
chr8 (180-246)||(27101508-27101573)
chr8 (190-240)||(29776035-29776085)
chr8 (180-246)||(30077387-30077453)
chr8 (174-239)||(3066042-3066107)
chr8 (195-252)||(4673440-4673497)
chr8 (181-210)||(8293854-8293883)
chr8 (186-239)||(12570514-12570567)
chr8 (182-239)||(12570736-12570793)
chr8 (127-172)||(14639742-14639787)
chr8 (190-231)||(34201056-34201097)
chr8 (124-205)||(43737760-43737836)
chr8 (183-231)||(3508060-3508108)
chr8 (187-231)||(8798838-8798882)
chr8 (181-233)||(12559107-12559159)
chr8 (184-252)||(14692447-14692514)
chr8 (176-212)||(29447471-29447507)
chr8 (124-180)||(34450970-34451026)
chr8 (182-233)||(37283814-37283863)
chr8 (198-242)||(41831958-41832002)
[»] scaffold0306 (1 HSPs)
scaffold0306 (124-257)||(13382-13516)
[»] scaffold0152 (1 HSPs)
scaffold0152 (124-257)||(21811-21945)
[»] scaffold0171 (1 HSPs)
scaffold0171 (163-252)||(23407-23496)
[»] scaffold0793 (1 HSPs)
scaffold0793 (124-249)||(4830-4953)
[»] scaffold0376 (1 HSPs)
scaffold0376 (179-239)||(6312-6372)
[»] scaffold0003 (1 HSPs)
scaffold0003 (124-257)||(241576-241715)
[»] scaffold0036 (1 HSPs)
scaffold0036 (124-232)||(9685-9799)
[»] scaffold0223 (1 HSPs)
scaffold0223 (176-246)||(20165-20235)
[»] scaffold0050 (1 HSPs)
scaffold0050 (130-240)||(70277-70382)
[»] scaffold0004 (1 HSPs)
scaffold0004 (195-252)||(92794-92851)
[»] scaffold0123 (1 HSPs)
scaffold0123 (176-239)||(44521-44584)
[»] scaffold1528 (1 HSPs)
scaffold1528 (176-246)||(1028-1098)
[»] scaffold0103 (1 HSPs)
scaffold0103 (195-257)||(51793-51855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (176-246)||(53173-53243)
[»] scaffold0652 (1 HSPs)
scaffold0652 (124-257)||(411-539)
[»] scaffold0053 (1 HSPs)
scaffold0053 (124-257)||(8780-8908)
[»] scaffold0066 (1 HSPs)
scaffold0066 (195-246)||(33378-33429)
[»] scaffold0007 (1 HSPs)
scaffold0007 (186-257)||(225274-225345)
[»] scaffold0027 (1 HSPs)
scaffold0027 (180-246)||(46675-46741)
[»] scaffold0008 (1 HSPs)
scaffold0008 (176-238)||(263368-263430)
[»] scaffold0049 (2 HSPs)
scaffold0049 (181-238)||(63774-63831)
scaffold0049 (176-229)||(56932-56985)
[»] scaffold0022 (2 HSPs)
scaffold0022 (175-240)||(99892-99957)
scaffold0022 (181-231)||(90851-90901)
[»] scaffold0018 (2 HSPs)
scaffold0018 (195-252)||(192264-192321)
scaffold0018 (176-257)||(178814-178896)
[»] scaffold0361 (1 HSPs)
scaffold0361 (195-246)||(14523-14574)
[»] scaffold0011 (2 HSPs)
scaffold0011 (181-248)||(17750-17817)
scaffold0011 (181-231)||(240022-240072)
[»] scaffold0236 (1 HSPs)
scaffold0236 (177-231)||(25765-25819)
[»] scaffold0116 (1 HSPs)
scaffold0116 (180-246)||(9891-9957)
[»] scaffold0320 (1 HSPs)
scaffold0320 (182-231)||(17038-17087)
[»] scaffold0168 (1 HSPs)
scaffold0168 (176-257)||(21025-21106)
[»] scaffold0722 (1 HSPs)
scaffold0722 (180-240)||(7032-7092)
[»] scaffold0450 (1 HSPs)
scaffold0450 (176-256)||(8631-8711)
[»] scaffold0122 (2 HSPs)
scaffold0122 (176-252)||(8653-8729)
scaffold0122 (180-246)||(8003-8068)
[»] scaffold0623 (1 HSPs)
scaffold0623 (179-246)||(5995-6062)
[»] scaffold0136 (1 HSPs)
scaffold0136 (130-242)||(3793-3911)
[»] scaffold0126 (1 HSPs)
scaffold0126 (174-257)||(19127-19209)
[»] scaffold0083 (1 HSPs)
scaffold0083 (137-212)||(45492-45562)
[»] scaffold0021 (2 HSPs)
scaffold0021 (183-242)||(130479-130538)
scaffold0021 (160-200)||(3023-3062)
[»] scaffold0019 (1 HSPs)
scaffold0019 (176-252)||(71710-71788)
[»] scaffold0697 (1 HSPs)
scaffold0697 (160-246)||(1637-1718)
[»] scaffold0227 (1 HSPs)
scaffold0227 (188-246)||(7319-7377)
[»] scaffold0246 (1 HSPs)
scaffold0246 (195-252)||(19563-19619)
[»] scaffold0025 (1 HSPs)
scaffold0025 (177-237)||(23771-23832)
[»] scaffold0311 (1 HSPs)
scaffold0311 (221-257)||(10512-10548)
[»] scaffold0085 (1 HSPs)
scaffold0085 (186-246)||(26386-26446)


Alignment Details
Target: scaffold0110 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 2 - 435
Target Start/End: Complemental strand, 29076 - 28642
Alignment:
Q  2 aaaaagtgcttaaccaatttgatctcaaggttaatttaggggtttacatacagcagaaggaaaacggacacatatgctttaccagttttgtgattgggtt 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29076 aaaaagtgcttaaccaatttgatctcaaggttaatttaggggtttacatacagcagaaggaaaacggacacatatgctttaccagttttgtgattgggtt 28977  T
Q  102 aattacttgtaaga---gagtcatgacggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataat 198  Q
    |||||||||||| |   ||||||| ||||| ||||| ||||||||||||||||||||               |||||||||| |||||||||||||||||    
T  28976 aattacttgtaacaaatgagtcataacggacactccccggattaggcatgtccccgt--------------atgtctgacacaacaccgacacatataat 28891  T
Q  199 tacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtg------------ttcgtgcttcataacttataataaatatgttagaa 286  Q
    |||| |||||||||| ||||||| ||||||||| | |||||||||||||||||            ||||||||||||||||| ||||||||||||| |||    
T  28890 tacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgcccatattcgtgcttcataacttgtaataaatatgttggaa 28791  T
Q  287 aacttacatcaacttttaaactaaatacataaaattgatgtatgtgaactaatacatnnnnnnntatgttagaaaatctacataaactatttttcacgta 386  Q
    || |||||| || |||||| |||||||||||||||||||||||||||||||||||||       |  ||||||||||||||||||||||||||| |||||    
T  28790 aatttacataaaattttaagctaaatacataaaattgatgtatgtgaactaatacataaaaaaatgagttagaaaatctacataaactattttttacgta 28691  T
Q  387 tctaaatgcatcaatttttcaactatcctcgttgtttacggtatttcat 435  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28690 tctaaatgcatcaatttttcaactatcctcgttgtttacggtatttcat 28642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 31084438 - 31084310
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||||||||||||||| ||||  |||| |||||||||| ||||||||| |||||| | |||||||| |||||||||  ||||| |||    
T  31084438 acggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttca 31084339  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||||||| |||||    
T  31084338 aattattagctgtgtcggcgtgtcagtgt 31084310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 19579816 - 19579683
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc------tgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||||||||||| |||||| ||||||||||| |||||||||      ||||||||||||||||| | ||||| |||| |||||||  |||||||||    
T  19579816 actcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgattttctca 19579717  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||| | ||||| ||||    
T  19579716 aattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 21576694 - 21576822
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| |||| ||||| ||||||||||     ||||| |||||| | ||||||||||||||||||  ||||| |||    
T  21576694 acggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtc-----cgacatcgacacttgtaattacactgaattatgtgattttttca 21576788  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||| ||||| | ||||||||||    
T  21576789 aattattagctgtgttggcgtatcagtgttcgtg 21576822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 43001915 - 43001782
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||  ||||| |||| |||||||||| |||||  |||| |||| | |||||||||||||||||| |||||| |||    
T  43001915 acggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaattttttca 43001816  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| |||||| | ||| ||||| ||||    
T  43001815 aattattagcagtgtcgacatgtcagtgtccgtg 43001782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 3966568 - 3966490
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||| ||| |||||    
T  3966568 ctgacacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgt 3966490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 30502345 - 30502446
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||||||||||| ||||  |||||||||||||||     ||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  30502345 tccttggattaggcatgtcccagtgtcggacatgtgtcgtgtc-----cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T
Q  232 gctgtgt 238  Q
    || ||||    
T  30502440 gcggtgt 30502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 30542688 - 30542789
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||||||||||| ||||  |||||||||||||||     ||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  30542688 tccttggattaggcatgtcccagtgtcggacatgtgtcgtgtc-----cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T
Q  232 gctgtgt 238  Q
    || ||||    
T  30542783 gcggtgt 30542789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 229
Target Start/End: Complemental strand, 14873632 - 14873527
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| ||||| |||| |||| | ||| |||| |||||||||||||||||||||||| |||||||   ||||||||    
T  14873632 acggacactcctcggattaggcgtgtcccggtgttggacacgtgttgcgtccgacatgacaccgacacatataattacactaaattatgtgcttttctca 14873533  T
Q  224 aattat 229  Q
    ||||||    
T  14873532 aattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 16203795 - 16203872
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||| ||||||||| ||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtg 16203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 11685999 - 11685926
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||| ||| |||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgt 11685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 21191005 - 21191133
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| | ||  |||| |||| |||||     |||||||||||| | ||||||||||||||||||  ||||| |||    
T  21191005 acggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttca 21191099  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||| ||| ||||| ||||    
T  21191100 aattattagctgtgtcggcatgtcagtgtccgtg 21191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 36838605 - 36838544
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  36838605 acacgacaccgacacatataattacactaaattatgtaattttctcaaattattagcggtgt 36838544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 15382589 - 15382470
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgaca-cgacaccgacacatataattacactgaat--tatgcaattttctcaaat 226  Q
    |||||||||||||||| |||||| ||||  |||||||||||||||  ||| |||||||||||| | |||||| |||||||  ||||   |||| ||||||    
T  15382589 actcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttcaaat 15382490  T
Q  227 tattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||    
T  15382489 tattagctgtgtcggcgtgt 15382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 28588629 - 28588740
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| |||||||| || |||||  |||| ||| ||||||||||||     |||||||||||| ||||||||||||||||||||  |||||||||||||||    
T  28588629 actcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtc-----cgacaccgacacctataattacactgaattatgtgattttctcaaattat 28588723  T
Q  230 tagctgtgtcggcgtgt 246  Q
    || | ||||||||||||    
T  28588724 taccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 6471886 - 6471948
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  6471886 acacgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 7677819 - 7677703
Alignment:
Q  131 ctcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaattttctcaa 224  Q
    ||||||||||||||| |||||| ||||  |||||||| |||||| |||||      ||||||||||| | ||||| ||||||||||||  ||||| ||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttttcaa 7677720  T
Q  225 attattagctgtgtcgg 241  Q
    |||||||||||||||||    
T  7677719 attattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 13287395 - 13287476
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| | || |||||||||||||||  ||||| ||||||||||| |||||||| ||||||||||| ||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtg 13287476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 21522813 - 21522732
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||  | ||||||||||||||||||  ||||| | |||||||||||||||||||||||| ||||| ||||    
T  21522813 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21522732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 21533379 - 21533298
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||  | ||||||||||||||||||  ||||| | |||||||||||||||||||||||| ||||| ||||    
T  21533379 gacacgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21533298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 39205954 - 39205873
Alignment:
Q  165 gtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||||||||| ||||||||||||||||  ||||||   ||||||||||||||||||| |||||| |||||    
T  39205954 gtgtcgtgtcggacacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgt 39205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 6035545 - 6035470
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| ||||||||||||||||||||   | ||||||||||||||||| |||||||||||| |||||    
T  6035545 gacacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtcagtgt 6035470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 6247681 - 6247609
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | ||||||||||||||||||  ||||| |||||||||||| ||||||||||||| |||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 39698604 - 39698528
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| ||||| | ||||||||||||||||||  ||||| ||||||||||||||||||| |||||| |||||    
T  39698604 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgt 39698528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 41091252 - 41091316
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||| |||||||||||||||||||||||||||  |||||||||||| |||||| |||||    
T  41091252 tgacacgacatcgacacatataattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 2436991 - 2436909
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||||||||||||||||||||| |||  ||||||||  |||||  |||||||||||| |||||||||||| |||||    
T  2436991 gtgtcggacacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgt 2436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 18592136 - 18592070
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||| ||| ||||||| ||||||||    
T  18592136 gacacgacaccggcacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggc 18592070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 21814324 - 21814254
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||||||||| ||| ||  ||||||| |||  |||||||||||||||||||    
T  21814324 gacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt 21814254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 231
Target Start/End: Original strand, 23015934 - 23016040
Alignment:
Q  125 cggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaa 224  Q
    |||| |||||||||||||||| ||||||  |||  ||||  ||||||||| || || ||| |||||| ||||||||||||||||||||  ||||||||||    
T  23015934 cggacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgatacaacatcgacacctataattacactgaattatgtgattttctcaa 23016033  T
Q  225 attatta 231  Q
    || ||||    
T  23016034 atgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Complemental strand, 27932279 - 27932229
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 6401619 - 6401491
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc------tgacacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| |||| |||| | ||||||||| ||||| ||||||||||      ||||||||||||||||||||||||||||||| ||| ||  |||    
T  6401619 acggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacactgacacgacaccgacacatataattacactgtattttgtgatt 6401520  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| |||   |||| |||||||||||||    
T  6401519 ttctaaaaaatttagttgtgtcggcgtgt 6401491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 15410444 - 15410525
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| ||||| |||||||| |||||||||||| ||  |||||||| ||||||||||| |||||||||||| ||||| ||||    
T  15410444 gacacaacaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 15410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 184 - 257
Target Start/End: Original strand, 24906305 - 24906378
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||| | ||||||||||||||||||  ||||| ||||||||||| |||||| ||||||| ||||||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtg 24906378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 27144515 - 27144450
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||| |||||||  |||| |||||||||||||| |||||||||||| |||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgt 27144450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 32766939 - 32767004
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||  ||||||||||||||| |||||| ||| ||||||||||||||||||| |||||||    
T  32766939 gacacgacacaaacacatataattacattgaattgtgcgattttctcaaattattagcggtgtcgg 32767004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 14674323 - 14674251
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||| | |||||||||| |||||||  ||||| |||||||||||||||||||||||||| ||||| ||||    
T  14674323 ccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 193 - 257
Target Start/End: Complemental strand, 22013460 - 22013396
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| ||||||| ||||||  ||||||||||||||||||||||||| ||||| ||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtg 22013396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 24273039 - 24273114
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcataa 265  Q
    ||||||||||||||||||||||||  |||||||||||||| || ||||||| | || |||||| |||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtcttagtg-tcgtgcttcataa 24273114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 24389175 - 24389100
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcataa 265  Q
    ||||||||||||||||||||||||  |||||||||||||| || ||||||| | || |||||| |||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttctcaaattaataactgtgtcagtgtcttagtg-tcgtgcttcataa 24389100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 4344784 - 4344717
Alignment:
Q  197 attacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    ||||||||||||||||  ||||| ||||||||||| | ||||| |||||||||||||| |||||||||    
T  4344784 attacactgaattatgtcattttttcaaattattatcggtgtcagcgtgttagtgttcatgcttcata 4344717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 10298639 - 10298556
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| || ||||||||||||| | |||||||| || ||||||  | ||| |||||||||||| |||||||||||||||||||    
T  10298639 cgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgt 10298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 16734930 - 16734848
Alignment:
Q  177 acacgacaccgacacatataattacac--tgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||||||||||  |  |||||  |||||||| ||||||||| | |||||||||||||||||| ||||    
T  16734930 acacgacaccgacacatataattacacacttgattatataattttcttaaattattaacggtgtcggcgtgttagtgtccgtg 16734848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 41633795 - 41633728
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||  | |||||||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  41633795 acgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgt 41633728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 6326312 - 6326374
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||| ||||||||||||||| ||||  ||||||||||| ||||| ||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtg 6326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 8420086 - 8420020
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||||||| |||||||||  ||||| |||||||||||||| |||||||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgt 8420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 32630735 - 32630801
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| |||||||||||||||| ||||||||  |||||||||||||||||| | ||||| ||||||    
T  32630735 cgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgt 32630801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 168 - 262
Target Start/End: Original strand, 38749551 - 38749645
Alignment:
Q  168 tcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttca 262  Q
    ||||||| ||||| ||||| ||||||||||||||| |||||||||  ||||| ||||||||||| | |||||| | |||  ||||| ||||||||    
T  38749551 tcgtgtccgacacaacaccaacacatataattacattgaattatgtcattttttcaaattattatcggtgtcgacatgtccgtgtttgtgcttca 38749645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 42029862 - 42029745
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||| |||| ||||  ||||  ||||||||||||||||     ||||||||| ||||||||||||| |||||||||  ||||||| |    
T  42029862 acggacactcctcggataaggcgtgtctacgtgacagacatgtgtcgtgtc-----cgacaccgatacatataattacattgaattatgtgattttctaa 42029768  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    | || |||  |||||||||||||    
T  42029767 attttttaattgtgtcggcgtgt 42029745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 12264836 - 12264901
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||| ||| ||||||||||||| |||||| |||| ||| ||| |||||    
T  12264836 gacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgt 12264901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 37328840 - 37328905
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||||||||| ||||||||||||||| ||  |||||  ||||||||| ||||||||||    
T  37328840 gacacgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcgg 37328905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 42893418 - 42893353
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| | ||||||||||| ||||||  ||||| ||||||||||||||||||||| ||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgt 42893353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 17123157 - 17123035
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| ||||  ||||||| |||||||     | ||||||||| ||||||||  |||  ||||||  |||||||||    
T  17123157 acggacactcctcggattaggcgtgtccc-gtgtcggacatgtttcgtgtc-----caacaccgacatatataattgtacttgattatgtgattttctca 17123064  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||| ||||||| |||||    
T  17123063 aattattagcggtgttggcgtgtcagtgt 17123035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 21351901 - 21351989
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    |||| ||||||||||| | ||||||||||||||||||  | ||| || ||||||||| |||||||| |||| ||||| | |||||||||    
T  21351901 gacatgacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtccatgcttcata 21351989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 22423808 - 22423864
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||||||| ||||||||| | |||||||||  ||||||||||||||||||    
T  22423808 gacacgacaccgacatatataattatattgaattatgtgattttctcaaattattag 22423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 30098993 - 30099104
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||| |||| |||| ||||||||||| ||||| ||||||| ||     |||||||||||||||||||||||| ||||||||| ||| | | |||   |    
T  30098993 actccttggataaggcgtgtccccgtgtcagacacgtgtcgtatc-----cgacaccgacacatataattacacagaattatgcgattgtttaaaaaatt 30099087  T
Q  230 tagctgtgtcggcgtgt 246  Q
    ||| |||||||||||||    
T  30099088 tagttgtgtcggcgtgt 30099104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 2548446 - 2548395
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| ||| |||||||||||||||| ||||||||| ||||||||    
T  2548446 cgacaccgacacttatgattacactgaattatgtaattttctctaattatta 2548395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 3751924 - 3752006
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| ||  ||||||||||||| ||| | |||||  |||||||||||||||||| ||||||| | ||||||||||||||    
T  3751924 ctgacacgatactaacacatataattatacttagttatgtgattttctcaaattattag-tgtgtcgacttgttagtgttcgtg 3752006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 18421841 - 18421900
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||| ||||||||||||||||||||| ||||||  ||||||||||||||| ||| |||||    
T  18421841 cgacgccgacacatataattacactggattatgtgattttctcaaattatcagcagtgtc 18421900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 23012379 - 23012461
Alignment:
Q  146 atgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||| |||| ||||||||||||||||     | ||||||||||||||||||||| | ||||||   |||||||||||||||||||    
T  23012379 atgtcccggtgtcagacatgtgtcgtgtc-----caacaccgacacatataattacattaaattatatgattttctcaaattattagc 23012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 35017153 - 35017030
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgt-ctgacacgacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||||||||||||||| ||||||  |||| |||| ||| |   | ||||||||||||   | |||||||||||||| |||||||  ||||||||    
T  35017153 acggacactcctcggattaggcgtgtcccgatgttggacacgtgcccaatactgacacgacactatcccatataattacactaaattatgtgattttctc 35017054  T
Q  223 aaattattagctgtgtcggcgtgt 246  Q
    ||||||||||  || |||||||||    
T  35017053 aaattattagtggtttcggcgtgt 35017030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 17593672 - 17593775
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||||| || |||||| ||||| |||| |||      |||||||  |||| ||| ||||||||||||||||||| |  |||||||||    
T  17593672 acggacactcctcggattaagcgtgtcccggtgttggacacgtg------ctgacacaccaccaacatatataattacactgaattacgtgattttctca 17593765  T
Q  224 aattattagc 233  Q
    ||||||||||    
T  17593766 aattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 19552541 - 19552620
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| |||||| ||||  |||||| |||||||  ||||| ||||||||||| |||||||||||||| ||||| ||||    
T  19552541 gacacgacatcgacacttata--tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtg 19552620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 19737484 - 19737554
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||| ||| || ||||||||| |||||||||||||||||| | || || |||||| |||||    
T  19737484 acaccgacacatatgattgcattgaattatgtaattttctcaaattattatcggtttcagcgtgtcagtgt 19737554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 19820396 - 19820471
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| |||||||  ||| |||||||  ||||||||||||||||||| ||||||| |||| ||||| ||||    
T  19820396 cgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtg 19820471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 21542093 - 21542027
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||| | ||||||||||||||||||  || || | |||||||||| |||||||||    
T  21542093 gacacgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggc 21542027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 33178084 - 33178018
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||||||||| |||||||  ||||| | |||||||||| |||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 34879409 - 34879343
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||||||||| |||||||||||||||   ||||||||||||| ||||| ||| ||||||||    
T  34879409 cgacatcgacacatattattacactgaattatatgattttctcaaatttttagcggtgccggcgtgt 34879343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 43564940 - 43564865
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| |||||||||||| |||||||  |||||  ||||||||  | ||||||||||||| ||||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgatttttccaaattat--gatgtgtcggcgtgtcagtgttcgtg 43564865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 7997172 - 7997241
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcg 255  Q
    |||||| ||||||||||||| |||||   ||||||||||||||||| | |||| ||||||| ||||||||    
T  7997172 cgacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgttcg 7997241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 16374337 - 16374414
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||| |||||||||||| |||||  ||||| |  |||||||| |  ||||| |||||||||||    
T  16374337 tgacacgacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgt 16374414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 41558644 - 41558701
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaatt 227  Q
    ||||| |||||||||| ||||||| |||||||| |||||||||  |||||||||||||    
T  41558644 gtgtccgacacgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 230
Target Start/End: Complemental strand, 26312873 - 26312778
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||  |||||  |||| ||||| || |||||||     ||||||||| |||||||||||||||||||||    |||||||||||||||    
T  26312873 actcctcggattaggtgtgtcctggtgtcagacacgtatcgtgtc-----cgacaccgatacatataattacactgaattaattgattttctcaaattat 26312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 36642763 - 36642839
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||| |||| ||||||| || ||||  | ||| ||||||||||| |||||||||||||| ||||| ||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtg 36642839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 38816692 - 38816761
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattat-gcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||||||||||||  |||| |||||| ||| || ||||||||||||||||||| ||||||||||||    
T  38816692 gacaccacaccgacacata--attatactgaaatatagcgattttctcaaattattagcggtgtcggcgtgt 38816761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 41600960 - 41600880
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| | ||||||| |||| | |||||| || |||||||||||||||||| |  ||| | ||||||||||||||||    
T  41600960 acacgacacagtcacatatgattatattgaattgtgtaattttctcaaattattatcaatgttgacgtgttagtgttcgtg 41600880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 17925172 - 17925223
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||||| |||||| |||||||||  ||||||| |||||||||    
T  17925172 cgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 39758327 - 39758272
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||||||||||||  ||||||| |||   |||||||||||    
T  39758327 accgacacatataattacactgaattatgtgattttctaaaaaatttagctgtgtc 39758272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 40212019 - 40211964
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||| |||||| |||| | ||||||||| ||||||||||| ||||||    
T  40212019 gacacgacaccgatacatatgattatattgaattatgtaattttctcaatttatta 40211964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 23221040 - 23220982
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||| || ||||| |||||||  ||||| ||||||||||||| ||||||    
T  23221040 acaccgacacatatgataacactaaattatgtgattttatcaaattattagcggtgtcg 23220982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 28474032 - 28473939
Alignment:
Q  139 attaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||  ||||| ||| | ||||||||||||| |  |||| ||||| ||||| ||||||||||| |||||| | |||||||||||||| ||||    
T  28474032 attaggcgagtcccagtgatggacatgtgtcgtgccccacacaacacc-acacacataattacactaaattatacgattttctcaaattaatagc 28473939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 30098391 - 30098313
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||| |||||||  |||||||||| |||||||||  ||||||||||||||||| | || ||| ||||| |||||    
T  30098391 ctgactcgataccgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgt 30098313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 240
Target Start/End: Complemental strand, 31264491 - 31264437
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||| ||| ||||||||||||||||  |||||||||||||||||  |||||||    
T  31264491 cgacacttatgattacactgaattatgtcattttctcaaattattacttgtgtcg 31264437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 43208264 - 43208322
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    ||||||||||| |||| |||| |||| |||||| |||||||||  ||||||||||||||    
T  43208264 gtgtctgacacaacacagacagatatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 2577180 - 2577241
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||  |||||| |||||||| |||||||  ||||||||||||||||| | |||||||    
T  2577180 cgacaccggaacatatgattacactaaattatgtcattttctcaaattattatcggtgtcgg 2577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 5467984 - 5468029
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||||||||||||||||||||  ||||| |||||||||||    
T  5467984 cgacacctataattacactgaattatgtgattttatcaaattatta 5468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 12927712 - 12927647
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||| ||||||||||||| ||||||   |||||||||||||||||||  |||||| ||||    
T  12927712 gacactgacatatataattacactaaattatatgattttctcaaattattagcgatgtcggtgtgt 12927647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 15884047 - 15883982
Alignment:
Q  180 cgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||| | ||||||||||||||||||  | |||| | |||||||| |||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttttttaaattatttgctgtgtcggcgt 15883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 25863257 - 25863212
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| |||||||||||||||||||   |||||||||||||||||    
T  25863257 cgacacttataattacactgaattatatcattttctcaaattatta 25863212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 28296388 - 28296327
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||| |||||||| | |||| |||||||||  ||||||||||||||||| | ||||||    
T  28296388 acgacaccaacacatatgagtacattgaattatgtcattttctcaaattattatcggtgtcg 28296327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 41995515 - 41995458
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||| |||||||||  ||||| || ||||||||| ||||||||||||| |||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgt 41995458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 4991373 - 4991424
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    |||||||||||||||||| |||||||| ||| |||||  ||||||||||||||    
T  4991373 gacacgacaccgacacatctaattaca-tgatttatgtcattttctcaaatta 4991424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Complemental strand, 32444830 - 32444778
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaatt 227  Q
    ||||||||||||||||||| | |||||| |||||||||  || ||||||||||    
T  32444830 tgacacgacaccgacacatttgattacattgaattatgtcatcttctcaaatt 32444778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 3e-33; HSPs: 115)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 1486659 - 1486775
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||| ||||  |||| |||||||||| |||||||||||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1486659 actcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattat 1486758  T
Q  230 tagctgtgtcggcgtgt 246  Q
    |||||||||| ||||||    
T  1486759 tagctgtgtcagcgtgt 1486775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 19562570 - 19562698
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    |||||||||||||||  |||||| ||||  |||| |||| || || ||||| |||||| |||||||||||||||||||| ||||  ||||||||||||||    
T  19562570 actcctcggattaggtgtgtccctgtgtcggacacgtgttgtatccgacactgacacctacacatataattacactgaactatgagattttctcaaatta 19562669  T
Q  229 ttagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||||||||||| ||||||||||    
T  19562670 ttagcagtgtcggcgtgtcagtgttcgtg 19562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 128 - 257
Target Start/End: Original strand, 38078614 - 38078738
Alignment:
Q  128 atactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaatt 227  Q
    |||||||||||||||||| |||||  |||||  ||||||||||||||     |||||||||||| | |||||||| |||||||||  ||||| |||||||    
T  38078614 atactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtc-----cgacaccgacacttgtaattacattgaattatgtgattttttcaaatt 38078708  T
Q  228 attagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||| ||||| ||||||||||    
T  38078709 attagctgtgtcgacgtgtcagtgttcgtg 38078738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 5376496 - 5376577
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| | ||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||| ||||    
T  5376496 gacacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtg 5376577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 9828165 - 9828037
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacg------acaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||||||||| | |||||| ||||  |||| |||||||||||||||||      ||||||||||||| |||||||||||||||||  |||    
T  9828165 acggacactcctcggattagacgtgtcccggtgtcggacacgtgtcgtgtctgacacggacacgacaccgacacataaaattacactgaattatgtgatt 9828066  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    || ||||||||||||  ||||||||||||    
T  9828065 ttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 5898215 - 5898330
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||| | |||||| ||||| |||| ||||||||||||||||     |||| ||||||||||||||||||||||  ||||| |||    
T  5898215 acggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacac-----cgacgcatataattacactgaattatgtgattttttca 5898309  T
Q  224 aattattagctgtgtcggcgt 244  Q
     ||||||||| ||||||||||    
T  5898310 gattattagcggtgtcggcgt 5898330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 6427415 - 6427331
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgc 258  Q
    ||||||||||||| ||||||||||||||| |||||||||  ||||||||||||||||||| |||| ||||||| ||||| |||||    
T  6427415 ctgacacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgc 6427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 22515836 - 22515971
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||| | ||||  || ||||||||||||     |||||||||||| | |||||||||| |||||||  ||||| |||    
T  22515836 acggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtc-----cgacaccgacacttgtaattacactaaattatgtgattttttca 22515930  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    |||||||||||||||| ||||||  |||| |||||||||||    
T  22515931 aattattagctgtgtctgcgtgtccgtgtccgtgcttcata 22515971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 38503439 - 38503302
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgac----acgacaccgacacatataattacactgaattatgcaatttt 219  Q
    ||||| || ||||||||||||  |||||| | || ||||||||||| |||| |||    | ||||||||||||||||||||||||||| |||   |||||    
T  38503439 acggacacacctcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgaccgacaggacaccgacacatataattacactgaaatatatgatttt 38503340  T
Q  220 ctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| ||||||| |||||||||| ||||    
T  38503339 ctcaaattattagcggtgtcggtgtgttagtgtccgtg 38503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 36878519 - 36878448
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 36878448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 40181975 - 40181871
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||| ||||  |||| |||| |||||     ||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  40181975 actcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtc-----cgacaccgatacatataattacactgaattatgtgattttctcaaattat 40181881  T
Q  230 tagctgtgtc 239  Q
    |||| |||||    
T  40181880 tagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 189 - 265
Target Start/End: Original strand, 12443469 - 12443545
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcataa 265  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  || | ||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtgcttcataa 12443545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 34712372 - 34712460
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| |||||||||| |||||||||||||||||| |||||||  ||||||||||||||||||| ||| ||| |||||| ||| ||||    
T  34712372 cgtgtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccgtg 34712460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 37598941 - 37598819
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| ||||||  |||  |||| ||||||||||     |||||||||||| ||||||||||||||||| ||  ||||| |||    
T  37598941 acggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtc-----cgacaccgacacttataattacactgaatt-tgtgattttttca 37598848  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| ||||||||||||| |||||    
T  37598847 aattattagttgtgtcggcgtgtcagtgt 37598819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 1864882 - 1864941
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 47989618 - 47989485
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||||||||||| ||||||  ||| |||||||||||||||| |||||      ||||||||||| | ||||||||||||||||||  |||    
T  47989618 acggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgatt 47989519  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    || | |||||||||  ||||||||||||| |||||    
T  47989518 tttttaaattatta-ttgtgtcggcgtgtcagtgt 47989485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 113362 - 113292
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||| | ||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  113362 gacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 6612167 - 6612237
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||    
T  6612167 gacacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgt 6612237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 20157340 - 20157410
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||| |||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||| ||||||    
T  20157340 gtgtcggacacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcg 20157410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 7918206 - 7918263
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  7918206 tgacacgacactgacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 10572586 - 10572663
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttc 254  Q
    |||| |||||||||||| ||||||||| ||||||||  ||||||||||||||||||  |||||||||||| |||||||    
T  10572586 acacaacaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttc 10572663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 44482293 - 44482240
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  44482293 gacacgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 2896122 - 2896198
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| |||||  ||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| ||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 2896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 5944398 - 5944268
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctg------acacgacaccgacacatataattacactgaattatgcaa--ttttct 221  Q
    |||||||||||||||| | |||| ||||  ||||||||| ||||| |      ||||||||||||||| ||||||||||||||||||||  |  |||| |    
T  5944398 actcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgatttttttt 5944299  T
Q  222 caaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| |||||||| |||||    
T  5944298 caaattattagctgtggcggcgtgtcagtgt 5944268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 13436517 - 13436445
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| |||||||||||||||||||||||||  |||| || ||||||||||| ||||||||||||| ||||    
T  13436517 cgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgttcgtgt 13436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 25361949 - 25361881
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||  ||||||||||    
T  25361949 gacacgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 40285650 - 40285726
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| |||||||||| | ||||||||||||||| ||||||||||||||||||| |||| || |||| |||||    
T  40285650 gacacgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgt 40285726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 41877470 - 41877534
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||| | |||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  41877470 cgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgt 41877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 398772 - 398842
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||| |||||||||||| ||||| ||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtg 398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 17754374 - 17754304
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||| |||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||| ||||    
T  17754374 gacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 17754304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 17831537 - 17831603
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||||||||||| |||  ||||||||||||||||||| |||||||||||| |||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 17831603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 24577182 - 24577252
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| | ||||||||||||||||||  ||||| |||||||||||| |||||| ||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 24577252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 34371775 - 34371714
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| |||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgattttctc-aattattagcggtgtc 34371714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 9709879 - 9709802
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||||||| |||| ||| ||| ||||| ||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtg 9709802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 23636050 - 23636115
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| || || || |||||||||    
T  23636050 gacaccgacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgt 23636115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 46348383 - 46348460
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||||| ||||||   ||||| |||||||||||||||||||||||||| ||||| ||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 52903308 - 52903231
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||||||||||||   ||||| | ||||||||| | || ||||||||||||||| ||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtg 52903231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 21378635 - 21378571
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| | |||||||||||||||||| |||||| |||| |||||||||||||||| ||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgt 21378571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 22881616 - 22881688
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | |||||||||| |||||||  ||||| |||||||||||| ||||||||||||| |||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 22881688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 39953146 - 39953210
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||||||||| ||||||||| |||||||  ||||||| ||||||||||| ||||||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgt 39953210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 246
Target Start/End: Original strand, 1704987 - 1705058
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||| | ||||||| ||||||||||  ||||| |||||||||||| |||||||| ||||    
T  1704987 tgacacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgt 1705058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 241
Target Start/End: Original strand, 40258888 - 40258994
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||  ||||  |||| |||||||||||||||     ||||||| | ||||||||||||||||||  ||||| |||||||||    
T  40258888 actcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgaca-----ccgacacttgtaattacactgaattatgtgattttttcaaattat 40258982  T
Q  230 tagctgtgtcgg 241  Q
    ||  ||||||||    
T  40258983 taattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 1262928 - 1262866
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| | |||||||||  ||||||||||||||||||||||||||||||||  |||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtg 1262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 1815361 - 1815244
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    ||||||| |||||||| |||||| ||||  |||||||||||||||      ||||||||||| | ||||||||||||||||||  ||||| | |||| ||    
T  1815361 actcctcagattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----ggacaccgacacttgtaattacactgaattatgtgattttttaaaataat 1815267  T
Q  230 tagctgtgtcggcgtgttagtgt 252  Q
    ||  ||||||||||||| |||||    
T  1815266 tatttgtgtcggcgtgtcagtgt 1815244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 3490396 - 3490462
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| | |||||||||||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  3490396 cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgt 3490462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 10577684 - 10577801
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||| |||| |||| ||||||||||| ||||| | ||||||||     || | ||||||||||||||||||||| ||| ||  ||||||| |    
T  10577684 acggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtc-----cgcccccgacacatataattacactgcattttgtgattttctaa 10577778  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    ||  |||||||||||||||||||    
T  10577779 aaaaattagctgtgtcggcgtgt 10577801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 13997940 - 13997870
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||||  ||||| | |||| |||| | |||||||||||| |||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgt 13997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 18337439 - 18337338
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||| ||||||||||| ||||  |||| |||| |||||     |||||||||||| | ||||||||||||||||||  ||||| |||    
T  18337439 acggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttca 18337345  T
Q  224 aattatt 230  Q
    |||||||    
T  18337344 aattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 19058856 - 19058922
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||||||||||||||||  || || | ||||||||||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 23714691 - 23714768
Alignment:
Q  166 tgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||||||   |||||||| |||||||||||| ||||||| ||||||||| |||| ||||| ||||||||||    
T  23714691 tgtcgtgtctgacaccg-accgacacgtataattacacttaattatgtaattttctctaatttttagcggtgtcggcgt 23714768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 25098563 - 25098617
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 25272544 - 25272482
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||| |||||||||||| |||||||  ||||||||||||| ||| |||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtc 25272482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 31015097 - 31015039
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcg 243  Q
    ||||||| | ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  31015097 ccgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcg 31015039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 38075970 - 38076036
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| |||||||||| |||||  |||| |||||||||||||| |||||| |||||    
T  38075970 cgacaccgacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcgtcgtgt 38076036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 40917862 - 40917744
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtct------gacacgacaccgacacatataattacactgaattatgcaattttctcaaa 225  Q
    |||||||||||||| |||||| ||||  |||| ||||||||||       ||||||||||||| || | |||||||||| |||| ||  ||||| |||||    
T  40917862 tcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaattgtg--attttttcaaa 40917765  T
Q  226 ttattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||    
T  40917764 ttattagctgtgtcggcgtgt 40917744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 18190063 - 18190167
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||  |||||| ||||  |||| |||| ||||||||||      |||||| | |||||||||||||||||| |||||| |||||||||    
T  18190063 actcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacat-----cgacacttgtaattacactgaattatgtaattttttcaaattat 18190157  T
Q  230 tagctgtgtc 239  Q
    ||| ||||||    
T  18190158 taggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 21038146 - 21038089
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||| ||| ||||| |||||||||||||||| |||||||| |||||||||||    
T  21038146 gacacgacactgacgcatatgattacactgaattatgtaattttcttaaattattagc 21038089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 231
Target Start/End: Complemental strand, 28674896 - 28674808
Alignment:
Q  138 gattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||| |||| | ||||| |||| |||||||||||||||| |     ||| ||||||||| ||||||||||| ||||||||||||||||||    
T  28674896 gattaggcgtgtctcagtgttggacaagtgtcgtgtctgacacca-----acatatataattatactgaattatgtaattttctcaaattatta 28674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 42359449 - 42359526
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | ||||||||||||||| ||  ||||| |||||||||||| |||||| |||||| ||||| ||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtg 42359526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 6415002 - 6415078
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||| |||||| |||| ||||||  |||||||||||| ||||||  ||||||||||| ||||| ||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 9629896 - 9629960
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||||| |||||| ||||||||||||   ||||| ||||||||||||| ||||||    
T  9629896 gacacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcg 9629960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 14332642 - 14332694
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||| ||||||||||||||| |||||||  ||||||||||||||||||    
T  14332642 cgacaccgagacatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 27471567 - 27471639
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    |||||| |||||| ||||||||||||||||||   |||||||||||||||||| || |||| |||| ||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtt 27471639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 31672895 - 31672967
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| || | |||||||||||||||| |  ||||| ||||||||||||||||||||| |||| |||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgt 31672967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 257
Target Start/End: Original strand, 48450592 - 48450664
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||| | |||||||||| |||||||  ||||| |||||||||||||||||| ||||||| ||||| ||||    
T  48450592 ccgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtg 48450664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 240
Target Start/End: Complemental strand, 19324612 - 19324561
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagtgtcg 19324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 23738735 - 23738676
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||| |||||| ||||| ||||||||||||  ||||| |||||||||||||||||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 24334705 - 24334772
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgca-attttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||||||||||||||||||  |||| |||||| |||||||||||||| ||||    
T  24334705 cgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggtgtgt 24334772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 24462678 - 24462737
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaa-ttttctcaaattattagctgtgtcg 240  Q
    ||||||||| ||||||||||||||||||||  || ||||| |||||||||||||||||||    
T  24462678 acaccgacagatataattacactgaattatataatttttcgcaaattattagctgtgtcg 24462737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 26238115 - 26238173
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||| |||||||||| |||||||||||||||  ||||||||||||||||||| |||||||    
T  26238115 acactgacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 39130767 - 39130818
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||||||||| ||||||  |||||||| |||||||||    
T  39130767 cgacaccgacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 43492454 - 43492560
Alignment:
Q  135 tcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagct 234  Q
    ||||||||||| ||| || ||||  ||||||||| ||||||||||     |||||||| |||||||||| |||||| |  |||||||||||||| |||      
T  43492454 tcggattaggcgtgtgccggtgtcggacatgtgttgtgtctgaca-----ccgacacacataattacaccgaattacgtgattttctcaaattactagtg 43492548  T
Q  235 gtgtcggcgtgt 246  Q
    ||||||||||||    
T  43492549 gtgtcggcgtgt 43492560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 262
Target Start/End: Original strand, 7353493 - 7353575
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttca 262  Q
    ||||||||||| ||||||||||||| ||||||| |||||| || ||||| |||| | ||||| ||||  |||| |||||||||    
T  7353493 cgacaccgacatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgtcggtgtacgtgcttca 7353575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 10233310 - 10233260
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||| ||||||||||||||||||||||||||  |||||||||| |||||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttattag 10233260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 12993258 - 12993176
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| ||||||||| ||||||||||| ||||||| | ||||| |  ||||||||||| |||||||| | ||||||| ||||    
T  12993258 tgacacaacaccgacatatataattacattgaattacgtaatttacgtaaattattagcggtgtcggcatcttagtgtacgtg 12993176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 17778653 - 17778549
Alignment:
Q  134 ctcggattaggcatgtccccgtgttagacatgtgtcgtgtct--gacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||| ||||  |||| |||||| | |   |||||||||||||||| | |||||||||||   ||||  ||||| |||||||||||    
T  17778653 ctcggattaggcatgtcccggtgtcggacacgtgtcgcgacaccgacacgacaccgacacttgtaattacactg---tatgtgattttttcaaattatta 17778557  T
Q  232 gctgtgtc 239  Q
    ||||||||    
T  17778556 gctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 25452151 - 25452206
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    ||||||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||    
T  25452151 gacaccgacacata--attacactgaattatgagattttctcaaattattagcagtgt 25452206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 29163381 - 29163447
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||| | |||||||||  ||||||  ||||| ||||| ||||||||||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgt 29163447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 257
Target Start/End: Original strand, 32724105 - 32724175
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| | ||||||| || ||||||||||||||| |  ||||||||| | ||||||||||    
T  32724105 gacacatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtg 32724175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 36906062 - 36905984
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| || || |||||||||||||| ||||||||||  ||||||||| ||||||||| |||| || |||| |||||    
T  36906062 ctgacacaacgccaacacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgt 36905984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 609482 - 609531
Alignment:
Q  204 tgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||||| |||||||||||||||||||  |||||||||||| ||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtt 609531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 25934737 - 25934609
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| |||| |||| | ||||||||| ||||| |||||||||| |||||      || |||||||||||||||||||||| ||| ||  |||    
T  25934737 acggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacacgataccgacacatataattacactgtattttgtgatt 25934638  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||  ||   ||||||||||||||||||    
T  25934637 ttctagaaaatttagctgtgtcggcgtgt 25934609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 30749899 - 30749858
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttct 221  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  30749899 cgacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 221
Target Start/End: Complemental strand, 30771350 - 30771309
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttct 221  Q
    |||||||||||||||||||||||||||||||||  |||||||    
T  30771350 cgacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 34298482 - 34298429
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||  ||||||||||||||||||  ||||||| ||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgt 34298429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 35919265 - 35919358
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaatttt-----ctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||  |||||      |||||||||||| |||||||| ||||| |||| ||||    
T  35919265 cgtgtccgacacgacacggacacttataattacactgaattatgtgattttttttcttcaaattattagatgtgtcggagtgttggtgtccgtg 35919358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 44296491 - 44296555
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||||||||||| |||| ||| |||||||  ||||||||||||||||| | |||||||    
T  44296491 gacacgacaccgacacatatgatta-actaaattatgtcattttctcaaattattaccggtgtcgg 44296555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 15641026 - 15641107
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||| |  |||| ||||||||||| |||  ||||||| ||||||||||| |||||||| ||| ||||| ||||    
T  15641026 ctgacacgacaccgata--tatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtg 15641107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 18556394 - 18556533
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||| |||||||||||| |||||| ||||  || | |||||| |||||||||      |||||| | || | |||||||| | |||||||  ||     
T  18556394 acggacacttctcggattaggcgtgtcccagtgtcggatacgtgtcgggtctgacaccgtcacgacaccaatacttgtaattacattaaattatgtgata 18556493  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    || |||||||||||||||||||||||||| ||||| ||||    
T  18556494 ttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 18556533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 29229521 - 29229461
Alignment:
Q  180 cgacaccgacacatataatta-cactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||||||| |||| ||| |||  ||||||||||||||||||| |||||    
T  29229521 cgacaccgacacatataattaccactaaatcatgtgattttctcaaattattagcagtgtc 29229461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 13011230 - 13011293
Alignment:
Q  195 taattacactgaattatgcaattttct-caaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| |||||||  ||||| | ||||||||||||||||||||| ||| ||||||||||    
T  13011230 taattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtgttcgtg 13011293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 14359537 - 14359587
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| |||||||  ||||| ||||||||||||||||||||||||||    
T  14359537 taattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgt 14359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 16927186 - 16927257
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| ||| ||||||||||||||||||||   ||||| |||||||||||||| || || ||||| |||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgt 16927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 39101188 - 39101243
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||| |||||||||||| |||||||  |||||||||||||||||  ||||||||    
T  39101188 cgacacctataattacacttaattatgttattttctcaaattattatatgtgtcgg 39101243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 49872890 - 49872843
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||||||||||||||  | ||||||||||| ||||||    
T  49872890 cgacacatataattacactgaattatatagttttctcaaatgattagc 49872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 51410084 - 51410021
Alignment:
Q  180 cgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggc 51410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 6332732 - 6332671
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||| || | ||||||||||||||||||  ||||| |||||||||||| ||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 8010283 - 8010341
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagct 234  Q
    ||||| ||| |||||| |||||||| ||||||||||  |||||| ||||||||||||||    
T  8010283 gacacaacatcgacacttataattatactgaattatataattttttcaaattattagct 8010341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 10474997 - 10475043
Alignment:
Q  200 acactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgt 10475043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 21366039 - 21366097
Alignment:
Q  199 tacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||  ||||| | ||||||||||||||| ||||||||  |||||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtg 21366097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 21530763 - 21530682
Alignment:
Q  160 gacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||     |||||||||||| |||||||| ||  ||||||   ||||||||||||||||| | ||||||||||||    
T  21530763 gacatgtgtcgtgtc-----cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 21530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 31511970 - 31512036
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattac-----actgaattatgcaattttctcaaattatta 231  Q
    |||||||||| |||||| ||||||||||||||     | ||||||||| ||||||||||||||||||    
T  31511970 gtgtctgacaggacaccaacacatataattacattgaattgaattatgaaattttctcaaattatta 31512036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 37055871 - 37055909
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagc 37055909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 241
Target Start/End: Original strand, 40747780 - 40747834
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||| |||||||||| |||||||||  ||||||||||||||||| | |||||||    
T  40747780 gacacctataattacattgaattatgtcattttctcaaattattatccgtgtcgg 40747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 211
Target Start/End: Original strand, 48148034 - 48148068
Alignment:
Q  177 acacgacaccgacacatataattacactgaattat 211  Q
    |||||||||||||| ||||||||||||||||||||    
T  48148034 acacgacaccgacatatataattacactgaattat 48148068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 9690274 - 9690344
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||| ||||||||||| ||||||||||||| ||  |||||||||  |||||||| ||||| |||||| |||||    
T  9690274 cgacgccgacacatatgattacactgaattgtg--attttctcagtttattagcggtgtcagcgtgtcagtgt 9690344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 23622012 - 23621963
Alignment:
Q  198 ttacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtt 247  Q
    |||||||||| |||  |||||| ||||||||||||||||||||| |||||    
T  23622012 ttacactgaagtatataattttttcaaattattagctgtgtcggtgtgtt 23621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 23622370 - 23622305
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| |||||||||||| |||||  ||||| | ||| ||||||  ||||||||||||||||||    
T  23622370 gacacatttaattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgt 23622305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 24176373 - 24176418
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||    
T  24176373 cgacacctataattacactgaatgatgttattttctcaaattatta 24176418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 29144373 - 29144422
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||||| |||||  | |||| ||||||||||||||||||||||||    
T  29144373 taattacactgcattatctatttttttcaaattattagctgtgtcggcgt 29144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 30847722 - 30847779
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||| ||||||||| |||||| |||||||||  ||||| ||||||||||||| |||||    
T  30847722 acactgacacatatgattacattgaattatgtcattttttcaaattattagcagtgtc 30847779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 2784614 - 2784554
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||||||||||| ||| |||||||  ||||||| ||||| ||| | |||||||    
T  2784614 gacaccgacacatataattatactcaattatgtgattttcttaaatttttaacggtgtcgg 2784554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 9103698 - 9103627
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | || ||| ||| |||||||  ||||| ||||||||||| |||||||||||||| |||||    
T  9103698 cgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 9103627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 19637827 - 19637767
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||||| |||||| ||||| |||  ||||||| ||||||||| | ||||||    
T  19637827 cgacaccgacacatatgattacattgaataatgtcattttcttaaattattatcggtgtcg 19637767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 42325616 - 42325568
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| ||||||||  |||||||||||||||  |||||||||||||||||    
T  42325616 caccaacacatattgttacactgaattatgtcattttctcaaattatta 42325568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 114)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 12696433 - 12696306
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||| |||| |||  |||||| |||| ||||| |||||||||| |||||||||| ||||| | |||||||||||||||||| |||||| |||||||||    
T  12696433 actccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattat 12696334  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||| ||||| ||||    
T  12696333 tagctgtgtcggcgtgtcagtgtccgtg 12696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 17327599 - 17327719
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| |||| ||||| |||||||||| |||||||||| |||||||||| ||||||| |||||||  |||||||||    
T  17327599 acggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatgtgattttctca 17327698  T
Q  224 aattattagctgtgtcggcgt 244  Q
    || | |||| |||||||||||    
T  17327699 aaatcttagttgtgtcggcgt 17327719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 10770616 - 10770746
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagaca--tgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct 221  Q
    ||||| ||||||| ||||||||||||||| |  |  ||||  |||||||||||||||||||||||||||| | ||||||||||||||||||  ||||| |    
T  10770616 acggacactcctcagattaggcatgtcccggcatcggacacgtgtgtcgtgtctgacacgacaccgacacttgtaattacactgaattatgtgatttttt 10770715  T
Q  222 caaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| ||||| ||||||| |||||    
T  10770716 caaattattagttgtgttggcgtgtcagtgt 10770746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 18367957 - 18367829
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| |||| |||| ||||||||||| ||||||||||||||||||||||      ||||||||||||||||||||||||| ||| ||  |||    
T  18367957 acggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacacgacaccgacacatataattacactgcattttgtgatt 18367858  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| |||  |||||||||||||||||||    
T  18367857 ttctaaaaaaattagctgtgtcggcgtgt 18367829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 3398727 - 3398601
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    ||||||| |||||| | ||| || ||||  |||||||||||||||  |||||||||||| || |||||||||||||||||||   ||||| |||||||||    
T  3398727 actcctctgattagacgtgttccggtgtcggacatgtgtcgtgtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaattat 3398629  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||| ||||| ||||    
T  3398628 tagctgtgtcggcgtgtcagtgtccgtg 3398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 9027247 - 9027160
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||||||||||||||||||||||||||| ||||||||  ||| ||||||||||||||| |||||||||||| ||||| ||||    
T  9027247 gtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtg 9027160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 258
Target Start/End: Complemental strand, 26562752 - 26562670
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgc 258  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||  ||||||||||    
T  26562752 gacacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgc 26562670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 34595244 - 34595127
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||  |||||| |||| ||||| ||||||||||     |||||||||||| | ||||||||||||||||||  ||||| |||    
T  34595244 acggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttca 34595150  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    ||||||||| |||||||||||||    
T  34595149 aattattagttgtgtcggcgtgt 34595127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 131 - 252
Target Start/End: Original strand, 7265549 - 7265665
Alignment:
Q  131 ctcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    ||||||||||||||||| | || ||||  ||||||| | |||||     |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  7265549 ctcctcggattaggcatattccggtgtcggacatgtattgtgtc-----cgacaccgacacatataattacactgaattatgtgattttctcaaattatt 7265643  T
Q  231 agctgtgtcggcgtgttagtgt 252  Q
    ||| |||| ||||||| |||||    
T  7265644 agcggtgttggcgtgtcagtgt 7265665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 170 - 239
Target Start/End: Original strand, 9025484 - 9025553
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  9025484 gtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagcagtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 9107366 - 9107447
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| | ||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||| ||||    
T  9107366 gacacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 9107447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 7996331 - 7996450
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||| ||||||||| ||||||||||||||||| ||||||         |||||||||| |||||||||||||||||||||   |||||||||    
T  7996331 acggagactccttggattaggcgtgtccccgtgttagacacgtgtcg---------cgacaccgacgcatataattacactgaattatatgattttctca 7996421  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||||||| ||| |||||    
T  7996422 aattattagcagtgtcggcatgtcagtgt 7996450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 8022470 - 8022351
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||| ||||||||| ||||||||||||||||| ||||||         |||||||||| |||||||||||||||||||||   |||||||||    
T  8022470 acggagactccttggattaggcgtgtccccgtgttagacacgtgtcg---------cgacaccgacgcatataattacactgaattatatgattttctca 8022380  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||||||| ||| |||||    
T  8022379 aattattagcagtgtcggcatgtcagtgt 8022351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 16766760 - 16766684
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| | ||||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||    
T  16766760 gacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 16766684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 180 - 256
Target Start/End: Complemental strand, 19040411 - 19040335
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgt 256  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||| |||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtattcgt 19040335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 8931598 - 8931669
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtt 247  Q
    ||||||||| ||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||    
T  8931598 gacacgacatcgacacatataattatactgaattatgttattttctcaaatttttagctgtgtcggcgtgtt 8931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 28152202 - 28152081
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||| ||||  |||| ||||||||||     |||||||||||| | ||||||||||||||||||  ||||| |||||||||    
T  28152202 actcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattat 28152109  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| ||||||||||| ||||| ||||    
T  28152108 tagctttgtcggcgtgtcagtgtccgtg 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 7977830 - 7977896
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 7086865 - 7086788
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||| || |||||    
T  7086865 cgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgt 7086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 8365457 - 8365596
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctga------cacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||||||||||| |||||| ||||  |||| |||||||||| ||      |||||||||||||| | ||||||||| ||||||||  ||     
T  8365457 acggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgata 8365556  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    || |||||||||||| ||||||||||||| ||||| ||||    
T  8365557 ttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 8365596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 7801156 - 7801231
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcg 255  Q
    |||||||||||| | ||||||| ||||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcg 7801231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 9658936 - 9658861
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| |||||||||||||||||||||  ||||||| ||||||||||| |||||||||||| ||||| ||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 9658861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 9629442 - 9629376
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||| |||||||||  |||||||||||||||| || ||||||||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgt 9629376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 10339063 - 10339200
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataatta-cactgaattatgcaat 216  Q
    ||||| ||||||| |||||||| |||||| ||||  ||||||||||||||| |||||      | ||| |||||||||||||| ||||||||||||  ||    
T  10339063 acggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgat 10339162  T
Q  217 tttctcaaattattagctgtgtcggcgtgttagtgttc 254  Q
    |||||||||||| | || |||||||||||| |||||||    
T  10339163 tttctcaaattaatcgcggtgtcggcgtgtcagtgttc 10339200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 19044529 - 19044451
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| |||||||||||||||||| |||||||||||||  || |||||||||||||||  |||||||||||| |||||    
T  19044529 ctgacatgacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgt 19044451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 20576629 - 20576699
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| | ||||| ||||    
T  20576629 gacacgacaccaacacttataattacactgaattatgcaattttctcgaattattagccgcgtcggtgtgt 20576699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 17841538 - 17841666
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||| | ||||  ||||  |||||||||     |||||||| ||| | |||||||||| |||||||  ||||| |||    
T  17841538 acggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtc-----cgacaccgtcacttgtaattacactaaattatgtgattttttca 17841632  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||| ||||| ||||    
T  17841633 aattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 34073343 - 34073400
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||    
T  34073343 gacacgacaccgacccatataattacactgaattatgagattttctcaaattattagc 34073400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 5732510 - 5732582
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||||||||| || ||||  ||||||||||||||||| | |||||||||||| |||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgt 5732582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 13851794 - 13851718
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||||||||||||||||||||||| |  ||||||||||||||||||| |||||| ||||| ||||| ||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtg 13851718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 21924935 - 21924999
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||||||||||||||||||||||||||   || |||||||||||||||| ||||||||||    
T  21924935 cgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 7938174 - 7938103
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| |||||||||||| ||||||   ||||| |||||||||||||||||||||||||| |||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgt 7938103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 9024123 - 9024242
Alignment:
Q  127 gatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaat 226  Q
    ||||| ||| |||||| || |||||| ||||| || ||||  |||||| |||||||||| ||||||||| |||||| |||||||||  ||||||||||||    
T  9024123 gataccccttggattatgcgtgtcccggtgttggatatgtcccgtgtccgacacgacactgacacatatgattacattgaattatgtcattttctcaaat 9024222  T
Q  227 tattagctgtgtcggcgtgt 246  Q
    ||| |  ||||||| |||||    
T  9024223 tatcatttgtgtcgacgtgt 9024242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 9195751 - 9195806
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  9195751 acacgacaccgacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 24138541 - 24138426
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||| |||||||||||||||| | |||| ||||| ||||| ||||  |||| ||||||| |||||||| |||||| ||||||   ||||| |||    
T  24138541 acggacactcttcggattaggcatgtctctgtgtcagacacgtgtcatgtccaacacaacaccgatacatataaatacacttaattatatgattttttca 24138442  T
Q  224 aattattagctgtgtc 239  Q
    |||||||||| |||||    
T  24138441 aattattagcagtgtc 24138426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 7378038 - 7377972
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||| ||||| ||||||| ||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgt 7377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 8776917 - 8777050
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc-tgacacgacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||||||||||||||  |||| | ||||  |||| |||||||||| || | ||||||| |||| | ||||||||||||||| ||  ||||| ||    
T  8776917 acggacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtc-cgacaccaacacttgtaattacactgaattttgtgattttttc 8777015  T
Q  223 aaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| ||||||||||||| ||||| ||||    
T  8777016 aaattattagttgtgtcggcgtgtcagtgtccgtg 8777050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 16488586 - 16488656
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||||||||| ||| ||  ||||||| |||  |||||||||||||||||||    
T  16488586 gacacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgt 16488656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 20371110 - 20371176
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||| ||| ||| |||||  ||||||||||||||||||| ||||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgt 20371176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 33001289 - 33001355
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||| | |||||||  ||||| ||||||||||||| ||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 10294169 - 10294104
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||| || |||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggc 10294104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 264
Target Start/End: Original strand, 32978848 - 32978984
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctc 222  Q
    ||||| |||||| ||||||| | |||||| ||||  |||||||||||||||     |||||||||||| | |||||||||| |||||||    |||| ||    
T  32978848 acggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattacacttaattatgtgttttttttc 32978942  T
Q  223 aaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    ||||||||||||||||||||||||  || || ||||||||||    
T  32978943 aaattattagctgtgtcggcgtgtccgtatttgtgcttcata 32978984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 9617494 - 9617442
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 15489733 - 15489809
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||| | |||||||| |||||| || |||||| |||||||||||| ||||||| ||||||||||| ||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtg 15489809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 21395302 - 21395373
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||| | |||||||||| |||||||  ||||||||||||||||||| |||| |||||||    
T  21395302 ctgacacgacaccgacacttgtaattacactaaattatg-tattttctcaaattattagcggtgttggcgtgt 21395373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 31959213 - 31959141
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||| | ||||||||||| ||||||  ||||| ||||||||||||||||| |||||||| ||||||||||    
T  31959213 ccgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtg 31959141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 253
Target Start/End: Original strand, 34290073 - 34290150
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    |||||||||||||||||||||  ||||||||||||||||  ||| || ||||||||||| ||||||||| ||| ||||||    
T  34290073 ctgacacgacaccgacacata--attacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtt 34290150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 189 - 253
Target Start/End: Complemental strand, 1532290 - 1532224
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagc--tgtgtcggcgtgttagtgtt 253  Q
    |||||||||||||||||||||||| |||||| |||||||||||||  ||||||| ||||| ||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtt 1532224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 13360373 - 13360448
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgt 256  Q
    |||||||| |||||||||||||||||||||||  |||||||||||||| |||  |||||| |||||  ||||||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgt 13360448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| | |||||||||||||||| |  ||||| |||||||||||| |||||||||||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 6214620 - 6214542
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||| |||||||||| |||||||   |||| | |||||| |||| || ||||||||||||||||||||    
T  6214620 acgacaccgacacatctaattacacttaattatgtgtttttttaaaattactagcggtatcggcgtgttagtgttcgtg 6214542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 188 - 238
Target Start/End: Original strand, 7569176 - 7569226
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||||    
T  7569176 acacctataattacactgaattatgtaattttctcaaattattatctgtgt 7569226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 246
Target Start/End: Original strand, 8805563 - 8805638
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| |||||||||||||  |||||||| |||||||  ||||||||||||||||||| ||| || |||||    
T  8805563 cgtgtctgacactacaccgacacata--attacactaaattatgtgattttctcaaattattagcagtgccgacgtgt 8805638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 16833365 - 16833295
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| | ||||||||||||| ||||  ||||| |||||||||||| ||||||||||||| |||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 16833295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 426514 - 426591
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||| | |||||||  ||||| ||||||||||| |||||||||||||| ||||| ||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtg 426591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 7027301 - 7027228
Alignment:
Q  180 cgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||||||  | |||| ||||||||| ||  |||||||||| |||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgt 7027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 30851659 - 30851597
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||||||||||||||||| |||||| ||  ||||||| ||||||||||| ||||||||||    
T  30851659 cgacaccgacacatataattacattgaattgtg--attttcttaaattattagcagtgtcggcgt 30851597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 30866149 - 30866202
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgt 30866202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 6665276 - 6665208
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||| ||||||||| |||||||| ||||||||||  |||| |||||||||||||| || |||||||    
T  6665276 gacacgataccgacacaaataattactctgaattatgtgatttactcaaattattagcggtttcggcgt 6665208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 7723246 - 7723322
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||| |||||||||||  |||||||||   ||||||||||||||||||| |||||  ||||| |||||    
T  7723246 gacacgacaccgatacatataattatgctgaattatatgattttctcaaattattagcagtgtccacgtgtcagtgt 7723322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 10842585 - 10842525
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| |||||||| |||||||  ||||| ||||||||||||| ||||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 13364707 - 13364767
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||| |||||||||||||||   ||||||||||||||| ||| ||||||||    
T  13364707 acaccgacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggc 13364767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 187 - 251
Target Start/End: Original strand, 17341671 - 17341735
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtg 251  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||| | |||||||||||| ||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 20518416 - 20518352
Alignment:
Q  169 cgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||| |||||| ||||||||||||| ||||| ||||| |||||||||||||| ||||    
T  20518416 cgtgtctgacaccgacaccaacacatataattatactgatttatgtaattttctcaaattgttag 20518352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 33818011 - 33817949
Alignment:
Q  180 cgacaccgacac---atataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||   ||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  33818011 cgacaccgacacgatatataattacactgaattatgaaattttctccaattattagcggtgtc 33817949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 4878052 - 4877935
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaa-ttttctc 222  Q
    ||||| |||||||||||||||| |||||  ||||  |||||||||||||||     |||||||||||| | |||||| ||| |||||||  | |||| ||    
T  4878052 acggacactcctcggattaggcgtgtcct-gtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattatacttaattatgtgacttttttc 4877959  T
Q  223 aaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||| ||||    
T  4877958 aaattattagctgtgtcggtgtgt 4877935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 28715354 - 28715295
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||| | ||||||||||||||||||  ||||| ||||||||||||| |||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 32511666 - 32511725
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||| |||| ||||||||||||||||||||  ||||||| ||||||||||| |||||    
T  32511666 cgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 34197190 - 34197139
Alignment:
Q  160 gacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattat 211  Q
    |||| ||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  34197190 gacacgtgtcttgtctaacacgacaccgacacttataattacactgaattat 34197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 853859 - 853925
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||| |||| |||||||  ||||| |||||||||||| |||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgt 853925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 5970104 - 5970174
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||  | ||||||||||||||||||  ||||| ||||||||||| |||||||| |||||    
T  5970104 gacacgacacccacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgt 5970174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 7151473 - 7151419
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||| ||||||||||||||||| |||||||  ||||| ||||||||||||    
T  7151473 cacgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Original strand, 24833243 - 24833305
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| |||||||| ||||||| || |||||||  |||||||||||| |||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgt 24833305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaatt 227  Q
    |||||||||||||||||||||||||||  |||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 11784217 - 11784282
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||||||||||||| | |||  |||||||||||||||||  ||||| |||||||    
T  11784217 gacaccgacatatataattacactgattcatgtgattttctcaaattattatatgtgtgggcgtgt 11784282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 25207808 - 25207747
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgt 256  Q
    |||||| ||||||||| | || ||||||||||||||||| |||||||||| || ||||||||    
T  25207808 taattatactgaattacgtaactttctcaaattattagcggtgtcggcgtattggtgttcgt 25207747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 28862184 - 28862115
Alignment:
Q  177 acacgacaccgacacatataattacactgaatt-atgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||| ||||||||||| |  ||||||||||    
T  28862184 acacgacaccgacacatatgattacactgaattaatgtcattttatcaaattattatcgatgtcggcgtg 28862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 31385040 - 31384927
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac-----gacaccgacacatataattacactgaattatgcaattt 218  Q
    ||||| |||||| ||||||||| |||||| ||||  |||| ||||||||||  ||||     ||||| ||||| | ||||||||||||||||||  ||||    
T  31385040 acggacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatgtgattt 31384941  T
Q  219 tctcaaattattag 232  Q
    | ||||||||||||    
T  31384940 tttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 32320665 - 32320746
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||| ||||||||| ||| |||||||||  ||||| ||||||||||| | ||||| |||| | |||| |||||    
T  32320665 gacacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgtatcagtgctcgtg 32320746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 34225823 - 34225868
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||    
T  34225823 ataattacactgaattatgcgattttttcaaattattagttgtgtc 34225868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 677900 - 677824
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| || ||||||| ||||||  |||||   ||||||||||||||||| | |||||||||||| |||||    
T  677900 gacacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgt 677824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 5626696 - 5626768
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||| |||||||||| || |  ||||||| |||  ||||| ||||||||||||| |||||    
T  5626696 cgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtgt 5626768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 6898281 - 6898353
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | |||||||||| ||||||| |||||  ||||||||||||  ||||| |||||| |||||    
T  6898281 cgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgt 6898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 238
Target Start/End: Original strand, 9911523 - 9911587
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattt-tctcaaattattagctgtgt 238  Q
    ||||||||||||||||| | ||||||||||||||||||  |||| | | ||||||||||||||||    
T  9911523 tgacacgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 17302622 - 17302538
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttct-caaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||  ||||| | |||||||| |||||||||  ||||| | ||||||||||| |||||| |||||| ||||||||||    
T  17302622 ctgacacgacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgttcgtg 17302538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 31579227 - 31579276
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||||||    
T  31579227 cgacaccgacacata--attacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 3209441 - 3209374
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttct-caaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||| ||||| |||||||  ||||| | |||||||||||||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgt 3209374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 6389796 - 6389725
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| ||| |||||||| ||||||   ||||||||||||||||| | |||||||||||| ||||| ||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtg 6389725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 7973716 - 7973665
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    ||||||||||||||| |||||||||||| ||||||| |||||| | ||||||    
T  7973716 acacgacaccgacacttataattacacttaattatgtaatttttttaaatta 7973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 10888970 - 10889033
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||  ||||||||||| ||||| |||||||  ||||| ||||||||||||| |||||    
T  10888970 gacacgacactaacacatataatcacactaaattatgtgattttatcaaattattagcggtgtc 10889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 14721300 - 14721249
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||| ||||||||||||| | ||||||||| |||||||| |||||||||    
T  14721300 cgacaccaacacatataattatagtgaattatgtaattttcttaaattatta 14721249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 24832641 - 24832594
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||||||| ||||||   |||||||||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattattagc 24832594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 251
Target Start/End: Complemental strand, 32313467 - 32313392
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtg 251  Q
    ||||||||||| |||||||||||| || ||||| |||  |||||||||| ||||||   |||||||||||| ||||    
T  32313467 gacacgacacccacacatataattgcattgaatcatgttattttctcaacttattattggtgtcggcgtgtcagtg 32313392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 252
Target Start/End: Original strand, 17168418 - 17168535
Alignment:
Q  136 cggattaggcatgtccccgtgttagacatgtgtc-gtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||  |||||  |||||||||| ||||| ||||| ||||| ||||| ||||| ||| |||||||| ||||||   ||||||||||||||||| |    
T  17168418 cggattaggggtgtcctagtgttagacacgtgtcagtgtccgacaccgacac-gacacctattattacactaaattatatcattttctcaaattattatc 17168516  T
Q  234 tgtgtcggcgtgttagtgt 252  Q
     |||| ||||||| |||||    
T  17168517 agtgttggcgtgtcagtgt 17168535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 17435243 - 17435181
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||| |||||| | |||||||||||| ||||| ||| | ||||| ||||    
T  17435243 taattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtg 17435181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 26178683 - 26178733
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||||| |||||||| |||||||  ||||| ||||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 1191706 - 1191763
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcg 243  Q
    |||||| | ||||||||||||||| ||  | ||| |||||||||||||||||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Complemental strand, 7930369 - 7930292
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||| |  |||| |||| |||||||  ||||| |||||||||||  ||||||||| ||| |||||    
T  7930369 tgacacgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgt 7930292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 215 - 264
Target Start/End: Original strand, 10760876 - 10760925
Alignment:
Q  215 attttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    ||||||||||||||||| | |||||| ||||| ||||| |||||||||||    
T  10760876 attttctcaaattattatcagtgtcgacgtgtcagtgtccgtgcttcata 10760925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 12627577 - 12627654
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||||||||| ||||||||||||||||  ||||| ||| ||||||||  || |||| |||||| ||| ||||    
T  12627577 cgacatcgacacatattattacactgaattatgtgattttttcacattattaggagtttcggtgtgttactgtccgtg 12627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 15443758 - 15443677
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| ||||| ||| ||||||||| | |||||||||  |||||||||||||||||    ||||| ||||| ||||||||||    
T  15443758 gacacaacaccaacatatataattatattgaattatgttattttctcaaattattattgatgtcgacgtgtcagtgttcgtg 15443677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 203
Target Start/End: Original strand, 21044895 - 21044924
Alignment:
Q  174 ctgacacgacaccgacacatataattacac 203  Q
    ||||||||||||||||||||||||||||||    
T  21044895 ctgacacgacaccgacacatataattacac 21044924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 21068151 - 21068220
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||||| ||| ||||   || | ||| ||||||||| |||| |||||||    
T  21068151 acacgacaccgacacatataattacaccgaactatgattttatttcatattattagcagtgttggcgtgt 21068220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 32299332 - 32299283
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||| ||||| |||| |||||||||  |||||||||||||||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 34446618 - 34446573
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||| ||||||||||||||||  |||||||||||||||||    
T  34446618 cgacacctatgattacactgaattatgtcattttctcaaattatta 34446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 7248421 - 7248365
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||| || |||||||||||||| ||||||||||  |||| |||| ||||||||    
T  7248421 gacacgactccaacacatataattaccctgaattatgtgatttcctcagattattag 7248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 7740700 - 7740628
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| |||||||||||||||||| |||| ||  |||||| ||||||||| | ||| || |||||| |||||    
T  7740700 cgacactgacacatataattacactcaattttgtgattttcacaaattatttgatgtatcagcgtgtcagtgt 7740628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 9522954 - 9522898
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||| |||||||||| | ||||||||||||||||||  ||||| | ||||||||||    
T  9522954 gacacaacaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 14796187 - 14796267
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| |||||||| | ||||||||||  ||||||| ||||||   | ||||||||| ||| ||||| ||||    
T  14796187 acacgacaccgacatatataattgcgctgaattatgtgattttcttaaattaacggttgtgtcggcatgtcagtgtccgtg 14796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #110
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 16111753 - 16111809
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||| ||||| |||||||||||| ||||||| |||||  ||||| ||||||    
T  16111753 gacacgacactgacacctataattacactaaattatgtaatttattcaaactattag 16111809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #111
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 17302399 - 17302347
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||  |||||||  ||||||| |||||||||| ||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattattagttgtgtc 17302347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #112
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 19147910 - 19147850
Alignment:
Q  171 tgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||||||||||||||||||||| ||||  |||   ||||||| |||||||||    
T  19147910 tgtcggacacgacaccgacacatataattactctgatctatatgattttcttaaattatta 19147850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #113
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 25038086 - 25038122
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  25038086 taattacactaaattatgtaattttctcaaattatta 25038122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #114
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 33925031 - 33925087
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||| |||||||||||| |||||||||||||||  |||||| | ||||| ||||    
T  33925031 gacacgataccgacacatattattacactgaattatataattttttaaaattgttag 33925087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 2e-28; HSPs: 109)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 5409780 - 5409908
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| ||||  |||| |||||||||| |||||||||||||||| | ||||| ||||||||||||  ||||| |||    
T  5409780 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttca 5409879  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||| || |||||| |||||    
T  5409880 aattattagctgtatcagcgtgtcagtgt 5409908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 43027413 - 43027546
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||| ||||||||||| |||||| ||||  |||| ||||||||||||||||||||||||||| | || |||||||| ||||||  ||||| |||    
T  43027413 acggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtgattttttca 43027512  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| |||| ||||| ||||| ||||    
T  43027513 aattattagctgggtcgccgtgtcagtgtccgtg 43027546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 13770806 - 13770673
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||| ||||||||||| ||| || ||||  |||| |||| ||||| ||||||||| |||||| | |||||||||||||||||| |||||| | |    
T  13770806 acggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaattttttta 13770707  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||| | ||||| ||||    
T  13770706 aattattagctgtgtcggcgtatcagtgtccgtg 13770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 22484083 - 22484012
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgt 22484012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 175 - 257
Target Start/End: Complemental strand, 27945105 - 27945023
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||| ||||    
T  27945105 tgacacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtg 27945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 21880262 - 21880134
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||| |||||||||||| |||||  ||||  |||||||||||||||     |||||||||||| | |||||||||||||||||| ||||||||||    
T  21880262 acggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatgtaattttctca 21880168  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||  ||||  | ||||||||||||||    
T  21880167 aattattagcgatgtccacatgttagtgttcgtg 21880134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 130 - 253
Target Start/End: Original strand, 32093969 - 32094094
Alignment:
Q  130 actcctcggattaggcatgtccccg-tgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctcaaatt 227  Q
    |||||||||||||||| |||||||| |||  |||| |||||||||| |||||||||||||||  | ||||||||||||||||||  | |||| |||||||    
T  32093969 actcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaatt 32094068  T
Q  228 attagctgtgtcggcgtgttagtgtt 253  Q
    ||||| ||||| ||| ||||||||||    
T  32094069 attagttgtgttggcatgttagtgtt 32094094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 32308183 - 32308107
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||| |||||    
T  32308183 gacacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt 32308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 9778615 - 9778500
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||| ||||||||| |||||| ||||  |||| |||| ||||| |||||||||||||||| | |||||| |||||||||||  ||||| |||    
T  9778615 acggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttca 9778516  T
Q  224 aattattagctgtgtc 239  Q
    |||||| |||||||||    
T  9778515 aattatcagctgtgtc 9778500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 24339757 - 24339635
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||||||||||| |||||| ||||  || | |||||||||| |||||      ||||||||||| | ||||||||||||||||||  ||||| |||    
T  24339757 actcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttttca 24339658  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||    
T  24339657 aattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 1433569 - 1433447
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||| | |||||  ||||  ||||  |||| |||| ||||||||||||||||||||||||||||  ||| |||  |||||||||    
T  1433569 acggacactcctcggattagacgtgtcctggtgtcggacacatgtcttgtccgacacgacaccgacacatataattacaccaaatgatgtgattttctca 1433470  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    |||||||| | ||||||||||||    
T  1433469 aattattaacggtgtcggcgtgt 1433447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 20549895 - 20549778
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||| |  |||  ||||||||| |||||     ||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  20549895 actcctcggattaggcgtgtctcattgtcggacatgtgttgtgtc-----cgacaccgacacatataattacactgaattacgtgattttctcaaattat 20549801  T
Q  230 tagctgtgtcggcgtgttagtgt 252  Q
    |||| ||||||| |||| |||||    
T  20549800 tagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 24105737 - 24105660
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||||| | |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  24105737 cgactccgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 24105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 176 - 248
Target Start/End: Original strand, 7328687 - 7328759
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtta 248  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| || ||| |||||||    
T  7328687 gacacgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgtta 7328759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 19206108 - 19206032
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||| | |||||||||  ||||||||||||||||||| ||||||||||||| |||| ||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtg 19206032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 18215176 - 18215263
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||||||||||||||| | ||| ||||||| ||||||  ||||| ||||||||||||||| |||||||||||||||| ||||    
T  18215176 gtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtg 18215263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 251
Target Start/End: Original strand, 22602706 - 22602781
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtg 251  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||| |||  | |||||||||||| ||||    
T  22602706 gacacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtg 22602781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 28155629 - 28155562
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtt 247  Q
    |||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  28155629 cgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgtt 28155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 5548745 - 5548673
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    ||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||||| ||| ||||||||    
T  5548745 gtgtccgacacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 19992061 - 19992001
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||| ||||||||||||||| ||||  |||||||||||||||||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 26733405 - 26733286
Alignment:
Q  133 cctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||||| ||| ||||| |  |||||| ||||||||     |||||||||||||| |||||| |||||||||||  ||||| ||||||||||||    
T  26733405 cctcggattaggcgtgttcccgtatcggacatgcgtcgtgtc-----cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattag 26733311  T
Q  233 ctgtgtcggcgtgttagtgttcgtg 257  Q
    | |||||| ||||| ||||| ||||    
T  26733310 cggtgtcgacgtgtcagtgtccgtg 26733286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 5835305 - 5835242
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||  ||||||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgt 5835242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 6630909 - 6630984
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||| ||||||||||||||||||||||||| |  | ||||||||||||||||  |||||||||||| |||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgt 6630984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 29787383 - 29787446
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||| ||| ||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtg 29787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 25481961 - 25481895
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||| |||| | ||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 35862024 - 35861950
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||| ||||| || ||||||| |||||||||  ||||| |||||||||||| ||||||||||||||||||||    
T  35862024 acgacacagacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgtt 35861950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 39138551 - 39138462
Alignment:
Q  127 gatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct 221  Q
    ||||||| | |||| |||| |||||||||||||||||||| |||||||     ||||||||||| |||||||||||||||||||||  |||||||    
T  39138551 gatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtc-----cgacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 231
Target Start/End: Complemental strand, 16341565 - 16341504
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| |||||||||||| |||||||||||||||| |||||||  |||||||||||||||||    
T  16341565 gtgtccgacacgacaccggcacatataattacacttaattatgtgattttctcaaattatta 16341504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Complemental strand, 22868094 - 22868029
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||  |||||||||||| |||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgt 22868029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 5236049 - 5235973
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||| | ||||||||||||| ||||||  |||||||| ||||||||||| |||||| ||||| |||||    
T  5236049 gacacgacaccgatatatataattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgt 5235973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 9482993 - 9482921
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||| |||  |||||| |||| |||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgt 9482921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 228
Target Start/End: Complemental strand, 17307956 - 17307904
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  17307956 gacacgacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 232
Target Start/End: Original strand, 18013070 - 18013126
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||| |||||||||||||||||||||||||| |||||| | ||||||||||    
T  18013070 gacacgacactgacacatataattacactgaattatgtaatttttttaaattattag 18013126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 26329378 - 26329454
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||| ||||||||||||||||||||||||| ||   |||||||||||||||| |  ||||||||||| |||||    
T  26329378 gacacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgt 26329454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 264
Target Start/End: Complemental strand, 1401083 - 1401000
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    |||||||| || ||||||||||||||||||||  | |||||||||||||||||  | || |||||| ||||| |||||||||||    
T  1401083 gacaccgatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtgcttcata 1401000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 8160479 - 8160416
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||| ||| ||||||||||||||||| ||||||| |||||||| ||||||||||| |||||    
T  8160479 gacacgataccaacacatataattacactaaattatgtaattttcttaaattattagcggtgtc 8160416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 27732243 - 27732290
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 33994316 - 33994194
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||| ||||||||| |||| | ||||| |||||||||||||||||     |||||||||| | ||||| ||||||||||||  |  || ||||||||     
T  33994316 actccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctg-----acaccgacacttgtaattgcactgaattatgtgaccttttcaaattag 33994222  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||| || |||||||||| ||||||||||    
T  33994221 tagttgcgtcggcgtgtcagtgttcgtg 33994194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Complemental strand, 43250046 - 43249975
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||| | |||||||||||| ||||| ||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 43249975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 7758391 - 7758329
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||| ||||||||||||||||| ||||||| ||||||||||  |||||||| ||||||||||    
T  7758391 gtgtccgacacgacaccgacacacataattatactgaattatataattttctaaaattattag 7758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 3721152 - 3721099
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||||||||| ||| |||||||  |||||||||||||||||||    
T  3721152 cgacaccgacacatataattatactaaattatgtgattttctcaaattattagc 3721099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 253
Target Start/End: Complemental strand, 7438769 - 7438692
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    |||| ||||||||||| | |||||||| |||||||||  ||||| ||||||||||| |||||||||| ||| ||||||    
T  7438769 gacatgacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtt 7438692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 25822776 - 25822648
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||||||  |||||||||||||||  ||| ||||| |||||||||| || ||      ||||||||||| | ||||||||||||||| ||   ||    
T  25822776 acggacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaattgtgatttt 25822677  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    || |||||||||||| |||||||||||||    
T  25822676 ttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 30731097 - 30731031
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    |||||||||||||||| |  ||||||||||||||||  |||||||||||||||| || |||||||||||    
T  30731097 acacgacaccgacacaca--attacactgaattatgtgattttctcaaattattcgcggtgtcggcgtg 30731031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 49107882 - 49107814
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||| ||||| |||||||   |||||||||||||||||| ||||||| ||||    
T  49107882 acacgacaccgacacatataatcacactcaattatg-tgttttctcaaattattagcggtgtcggtgtgt 49107814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 257
Target Start/End: Complemental strand, 10043046 - 10042919
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctg--acacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| ||||||| | |||||| ||||  |||||||||||| || |  ||||||||| ||||| ||||||||| || |||||||  | ||| |||||||||    
T  10043046 tccttggattagacgtgtcccggtgtcggacatgtgtcgtatccggtacacgacactgacacttataattacgctaaattatgtgaatttatcaaattat 10042947  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||  |||||||||||| ||||| ||||    
T  10042946 tagtggtgtcggcgtgtaagtgtccgtg 10042919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 11061077 - 11061153
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||| | |||||| ||| |||||||  ||||| ||||||||||||||||||||| |||| ||||| ||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtg 11061153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 15680868 - 15680796
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| |||||||||||| |||||||  ||||| |  ||||||||||| ||||||||||| |||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgt 15680796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 15902885 - 15902809
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||||||||||||||||||||| |||||||  ||||| |||||||||||   |||||||| ||| |||||    
T  15902885 gacacaacaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgt 15902809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 18212988 - 18213111
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct-caaatta 228  Q
    ||||||||||| |||| ||||||||||| ||| | | ||||||||     ||||||||||||||||||||||||| |||||||  |||||||  |||  |    
T  18212988 actcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtc-----cgacaccgacacatataattacactaaattatgtgattttctaaaaaaaa 18213082  T
Q  229 ttagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||||||||| | ||||| ||||    
T  18213083 ttagttgtgtcggcgtatcagtgtccgtg 18213111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 20545199 - 20545267
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataat 198  Q
    |||||||| ||||  | |||||||||||  ||||||||||||||  |||||||||||||||||||||||    
T  20545199 actcctcgaattaaacgtgtccccgtgtcggacatgtgtcgtgtacgacacgacaccgacacatataat 20545267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 21826332 - 21826260
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| |||| ||||| |||||  ||||| | ||||||||||  ||||||||||||||||||    
T  21826332 cgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgt 21826260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 32287463 - 32287523
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||||||||||||||| || ||||||||||||  ||||||||| ||||||||| ||||||    
T  32287463 cgacaccgacacatatacttgcactgaattatgtgattttctcagattattagcggtgtcg 32287523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 2948739 - 2948676
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||| ||||| |  ||||||| ||||||| ||| ||||||||||||    
T  2948739 caccgacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgt 2948676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 4909210 - 4909159
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||||||||| |||||| ||||||||| ||||||||||||||||||    
T  4909210 cgacactgacacatatgattacaatgaattatgtaattttctcaaattatta 4909159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 12843170 - 12843225
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    ||||||||||| ||||||| |||||||| ||||||||| |||||| ||||||||||    
T  12843170 tgacacgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 17851488 - 17851437
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||| ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattattagc 17851437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 23191954 - 23191891
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||| || |||| ||||||||||||| ||||  ||||||||||||||||||| ||||||||||    
T  23191954 gacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgt 23191891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 25791714 - 25791640
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||||| |||| ||| |||||  | |||||||||| |||||| |||||||||||| |||||    
T  25791714 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattagcggtgtcggcgtgtcagtgt 25791640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 26033457 - 26033516
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctg 235  Q
    ||||||| |||||||| | ||||||||||||||||||  ||||| |||||||||||||||    
T  26033457 gacacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 27093415 - 27093474
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||| |||||||||||||| |||||||  ||||||| ||||||||||| |||||||    
T  27093415 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 241
Target Start/End: Complemental strand, 27184886 - 27184827
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||| |||||||||||||| |||||||  ||||||| ||||||||||| |||||||    
T  27184886 acaccgacgcatataattacactaaattatgtgattttcttaaattattagcggtgtcgg 27184827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 3991384 - 3991322
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||||| | |||||| |||||||||||  ||||| |||||||||||| ||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 5233698 - 5233616
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||| ||||| |||||||||||||||||  ||||||  ||||||||||||||||| | || |||| |||| |||||    
T  5233698 gtgtcggacacaacaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgt 5233616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 11665436 - 11665506
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| |||| |||||| |||||||| |||||||||||  ||||| |||||||||||| |||||| ||||||    
T  11665436 gacatgacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 11665506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 21568622 - 21568688
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||| |||||||| |||||||  ||||||| ||||||||||| ||||| ||||||    
T  21568622 cgacaccgactcatatgattacacttaattatgagattttcttaaattattagccgtgtcagcgtgt 21568688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 246
Target Start/End: Complemental strand, 24289859 - 24289813
Alignment:
Q  200 acactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||    
T  24289859 acactgaattatgtaattttctcaaattattggcggtgtcggcgtgt 24289813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 30813856 - 30813818
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 35297669 - 35297723
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||| ||||||||||||| | |||||||||  |||||||||||||||||    
T  35297669 acacgacaccaacacatataattataatgaattatgtgattttctcaaattatta 35297723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 598318 - 598190
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||| |||||||||||| |||||| ||||  |||| ||||||||||||     |||||||||| || ||||||| | ||||| |  ||||||| |    
T  598318 acggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctg-----acaccgacacttacaattacatttaattacgtgattttctta 598224  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| ||||||  |||| ||||| ||||    
T  598223 aattattagcggtgtcgatgtgtcagtgtccgtg 598190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 8234243 - 8234139
Alignment:
Q  137 ggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgt 236  Q
    ||||||||| |||| | ||||  |||||||||||||||     |||||||| ||| | ||| ||||||||||||||  ||||| |||||||||||| |||    
T  8234243 ggattaggcgtgtctcggtgtcggacatgtgtcgtgtc-----cgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgt 8234149  T
Q  237 gtcggcgtgt 246  Q
    ||||| ||||    
T  8234148 gtcggtgtgt 8234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 9408333 - 9408406
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||| | |||||||||| |||||||  ||||| |||||||||||  |||||||| |||| |||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgt 9408406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 12278888 - 12278843
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattatta 12278843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 231
Target Start/End: Original strand, 21138987 - 21139044
Alignment:
Q  171 tgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| ||||||||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  21138987 tgtccgacacgacaccgacacatataattacagt-aattatg--attttctcaaattatta 21139044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 21828401 - 21828482
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||| |||||||| ||||||| || ||||||  |||||||||||||| || | |||||||||||| ||||| ||||    
T  21828401 gacacaacactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 252
Target Start/End: Original strand, 33384573 - 33384654
Alignment:
Q  171 tgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||| ||||| ||||| ||||||||||||||||| ||||||   ||||||||| ||||||| | ||||||| ||||| ||||    
T  33384573 tgtccgacaccacaccaacacatataattacactaaattataggattttctcagattattaacggtgtcggtgtgttcgtgt 33384654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 2424696 - 2424620
Alignment:
Q  155 tgttagacatgtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||| |||||||| |||||| ||||| || |||||  ||||||||||||||||  |||||||||||||||||||    
T  2424696 tgttagacatatgtcgtgtttgacactgacac-gatacata--attacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 18233604 - 18233656
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||| ||||||||||||||||||||  |||||||||||||| || ||||||    
T  18233604 cgacacctataattacactgaattatgtcattttctcaaattactatctgtgt 18233656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 24146874 - 24146822
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||||||||||||| | |||||||||  ||||||| |||||||||||    
T  24146874 gacaccgacacatataattatattgaattatgtgattttctaaaattattagc 24146822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 245
Target Start/End: Complemental strand, 37742581 - 37742517
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    ||||||||||||||| |||||| ||||| ||| |||||| | ||||||||||  |||||||||||    
T  37742581 gacaccgacacatattattacattgaatcatgaaattttgttaaattattagtggtgtcggcgtg 37742517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 137 - 253
Target Start/End: Complemental strand, 41020593 - 41020482
Alignment:
Q  137 ggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgt 236  Q
    ||||||| | |||||| |||||||| |||||||||||      | |||||||| |||||||||||||| |||||||  |||||   |||||||||| |||    
T  41020593 ggattagacgtgtcccggtgttagatatgtgtcgtgtt-----caacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgt 41020499  T
Q  237 gtcggcgtgttagtgtt 253  Q
    |||| ||||| ||||||    
T  41020498 gtcgacgtgtcagtgtt 41020482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 640171 - 640140
Alignment:
Q  181 gacaccgacacatataattacactgaattatg 212  Q
    ||||||||||||||||||||||||||||||||    
T  640171 gacaccgacacatataattacactgaattatg 640140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 2425736 - 2425799
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||| || |||| |||||||  ||||||||||||||||| | ||| ||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgt 2425799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 3520345 - 3520408
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||| ||||||||   |||||||||||| |||| | ||||| ||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgt 3520408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 244
Target Start/End: Original strand, 11272582 - 11272652
Alignment:
Q  176 gacacgacaccgacacatataattacactgaat--tatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||||||| | ||||||||||||||  ||||  ||||| ||||||||| || |||||||||||    
T  11272582 gacacgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgt 11272652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 11890907 - 11890970
Alignment:
Q  168 tcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||| ||||||||||| ||||  ||||||||||||||||||   ||||| |||||||||||    
T  11890907 tcgtgtccgacacgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Original strand, 19930936 - 19930991
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    |||||||| | ||||||||||||||||| |||||||||  ||||| ||||||||||    
T  19930936 tgacacgatatcgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 27363415 - 27363372
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||| |||||||||||| ||| |||||||||||||    
T  27363415 acacatataattagactgaattatgccattgtctcaaattatta 27363372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 38134410 - 38134457
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| |||||| |||||||||  |||||||||||||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattatta 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 42720891 - 42720962
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| |||||||||||||||| | |||||||  ||||| ||||||||||||| |||||  ||||| |||||    
T  42720891 gacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgt 42720962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 4880922 - 4880980
Alignment:
Q  192 atataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagt 250  Q
    |||||| ||||||| |||||| |||||| | |||||||||||  |||||||||||||||    
T  4880922 atataactacactgtattatgtaatttttttaaattattagcaatgtcggcgtgttagt 4880980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 7197297 - 7197363
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||||||| |||||||    ||||| | ||||||||||||||||||||||||    
T  7197297 cgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 9949066 - 9949100
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaatt 209  Q
    |||| ||||||||||||||||||||||||||||||    
T  9949066 tgacgcgacaccgacacatataattacactgaatt 9949100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 11072359 - 11072280
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||  |||| | ||||||||  | |||| ||||||||||| | ||||||||||||  |||||||||    
T  11072359 gacacgacaccgacacata--attatattgaattatatatttttttcaaattattatcggtgtcggcgtgtctgtgttcgtg 11072280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 11722121 - 11722175
Alignment:
Q  203 ctgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||  ||||||||||||| ||||| |||||||||||| ||||| ||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtg 11722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 11744195 - 11744229
Alignment:
Q  187 gacacatataattacactgaattatgcaattttct 221  Q
    ||||||||||||||||||||||||| |||||||||    
T  11744195 gacacatataattacactgaattatacaattttct 11744229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 21140978 - 21141048
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||| ||||||| |||||| ||||||||||||   ||||||| ||||||||||  |||||| |||||    
T  21140978 gacacgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgt 21141048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 21930693 - 21930616
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| |||||| | |||||| | ||||||||  |||||| | ||||||||||||| |||||||||| |||||    
T  21930693 ctgacacgacatcgacacttgtaattaaaatgaattatctaatttttt-aaattattagctgagtcggcgtgtcagtgt 21930616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 23128658 - 23128712
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||||||||| |||||||||||||||    ||||||||||||||||    
T  23128658 acacaacaccgacacatatgattacactgaattatatggttttctcaaattatta 23128712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 40287311 - 40287431
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaat-tatgcaattttctc 222  Q
    ||||| ||||||||||||||||||||||| ||||  ||||||||||          ||| |||||||| | |||||||||||||| ||||  ||||| ||    
T  40287311 acggacactcctcggattaggcatgtcccggtgtcggacatgtgtc----------cgataccgacacttgtaattacactgaatatatg--attttttc 40287398  T
Q  223 aaattattagctgtgtcggcgtgttagtgttcg 255  Q
    |||||||| | |||||||||||||  |||||||    
T  40287399 aaattattcgttgtgtcggcgtgtccgtgttcg 40287431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 8239056 - 8239101
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||||||||||   ||||||| |||||||||    
T  8239056 cgacacatataattacactgaattataagattttcttaaattatta 8239101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 23849460 - 23849509
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||| |||||||||||   |||||| |||||||||    
T  23849460 acaccgacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 25239710 - 25239763
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||| |||||||||||||| ||||  |||||||||||||||||| | ||||||    
T  25239710 gacacctataattacactgagttataaaattttctcaaattattatccgtgtcg 25239763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 2525844 - 2525904
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||||| |||| | |||||||||  |||| |||||||||||| | ||||||    
T  2525844 cgacaccgacacatatgattatattgaattatgtcatttgctcaaattattatcggtgtcg 2525904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 246
Target Start/End: Original strand, 3554485 - 3554572
Alignment:
Q  154 gtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||| ||||||||||||     |||||||||||  |||||||||| | ||||||| |||||||| ||||||| |   ||||||||||||    
T  3554485 gtgttagatatgtgtcgtgtc-----cgacaccgacatctataattacattaaattatgtaattttcttaaattatcattggtgtcggcgtgt 3554572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 7133295 - 7133339
Alignment:
Q  197 attacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||||||||  ||||||||||||||| | |||||||||    
T  7133295 attacactgaattatgtcattttctcaaattatcatctgtgtcgg 7133339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 17257977 - 17258021
Alignment:
Q  168 tcgtgtctgacacgacaccgacacatataattacactgaattatg 212  Q
    |||||||||||| ||||||||||| ||| |||||| |||||||||    
T  17257977 tcgtgtctgacatgacaccgacacttatgattacattgaattatg 17258021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 18039062 - 18039026
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatg 212  Q
    |||||||||||||||| | ||||||||||||||||||    
T  18039062 gacacgacaccgacacttgtaattacactgaattatg 18039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 26022549 - 26022601
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||||||||| |||||||||||||   || || |||||||||||||    
T  26022549 cgacaccgacacatatagttacactgaattagataacttgctcaaattattag 26022601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 88)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 3947710 - 3947828
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||  |||||  ||||  |||| |||||||||| |||||||||| ||||| | ||||||||||||||||||| ||||| |||    
T  3947710 acggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttca 3947809  T
Q  224 aattattagctgtgtcggc 242  Q
    |||||||||||||||||||    
T  3947810 aattattagctgtgtcggc 3947828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 23292935 - 23293052
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| ||||  |||| ||||||||||     |||||||||||| | |||||| |||||||||||  ||||| |||    
T  23292935 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtaattatactgaattatgtgattttttca 23293029  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||    
T  23293030 aattattagctgtgtcggcgtgt 23293052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 36635440 - 36635311
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacg-acaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||| ||||||||||| |||||| ||||  |||  ||||||||||||||||  ||||  |||||||||||||||||||||||||  ||||||||    
T  36635440 acggacactcttcggattaggcgtgtcccggtgtctgacgcgtgtcgtgtctgacactcacacgaacacatataattacactgaattatgtgattttctc 36635341  T
Q  223 aaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||  |||| ||||||| |||||    
T  36635340 aaattattagtggtgttggcgtgtcagtgt 36635311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 49431130 - 49431018
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct-caaatta 228  Q
    ||||||||||| |||| |||||| ||||| |||| ||||||||||     |||||||||||| | ||||||||||||||||||  ||||| | |||||||    
T  49431130 actcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtc-----cgacaccgacacttttaattacactgaattatgtgatttttttcaaatta 49431036  T
Q  229 ttagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||    
T  49431035 ttagctgtgtcggcgtgt 49431018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 715554 - 715677
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctc 222  Q
    ||||| |||||||||||||||| |||||| ||||  ||||||||||||||   ||| |||||| |||| | ||||||||||||||||||  | |||| |     
T  715554 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatgtgatttttttt 715650  T
Q  223 aaattattagctgtgtcggcgtgttag 249  Q
    ||||||||||||||||||| |||||||    
T  715651 aaattattagctgtgtcggtgtgttag 715677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 752880 - 753003
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctc 222  Q
    ||||| |||||||||||||||| |||||| ||||  ||||||||||||||   ||| |||||| |||| | ||||||||||||||||||  | |||| |     
T  752880 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatgtgatttttttt 752976  T
Q  223 aaattattagctgtgtcggcgtgttag 249  Q
    ||||||||||||||||||| |||||||    
T  752977 aaattattagctgtgtcggtgtgttag 753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 4672085 - 4672149
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||||||||  |||||||||||||| ||||||| |||||||||||||||||||||||    
T  4672085 cgacaccgacacatatagctacactgaattatgtaattttcccaaattattagctgtgtcggcgt 4672149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 30299008 - 30298928
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| | |||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||| ||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 30298928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 30327876 - 30327796
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| | |||||||||||||||||| || |||| |||||||||||||||||||||||||| ||||| ||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 30327796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 21945607 - 21945490
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||  | ||||  |||||||||| ||||     |||||||||||| | ||||||||||||||||||  ||||| |||||||||    
T  21945607 actcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtc-----cgacaccgacacttgtaattacactgaattatgtcattttttcaaattat 21945513  T
Q  230 tagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||| ||| |||||    
T  21945512 tagctgtgtcggcatgtcagtgt 21945490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 12895101 - 12895182
Alignment:
Q  165 gtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| |||||||||||||||| | |||||||  |||||||||  ||||| |||||||||||||||| |||||||||    
T  12895101 gtgtcgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 40613504 - 40613443
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||| ||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 24343560 - 24343500
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| |||||||||||||||||||| |||||||||||||||||| | ||||||||||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgt 24343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 2361975 - 2362041
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | |||||||||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  2361975 cgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgt 2362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 15659756 - 15659818
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    ||||||||||| |||||||||||||||| ||||||||  ||||||||||||||||||| ||||    
T  15659756 gacacgacaccaacacatataattacaccgaattatgagattttctcaaattattagcagtgt 15659818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 35723383 - 35723457
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgca-attttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| |||||||||||||||| |||||||||   ||||||||||||||||||| |||||||||||| |||||    
T  35723383 acgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt 35723457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 5414110 - 5414238
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc------tgacacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| |||| |||  |||||| |||| ||||| ||||||||||      |||||||||||||| |||||||||||||||| ||| ||  |||    
T  5414110 acggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacactgacacgacaccgatacatataattacactgcattttgtgatt 5414209  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| |||  |||||||||||||||||||    
T  5414210 ttctaaaaaaattagctgtgtcggcgtgt 5414238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 8423718 - 8423779
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||  ||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  8423718 cgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 12797295 - 12797414
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| | |||||| |||| |||||||| |||||||     |||||||||||| | ||||||||||||||||||  ||||| |||||||||||    
T  12797295 tcctcggattagacttgtcccggtgtcagacatgtatcgtgtc-----cgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattatta 12797388  T
Q  232 gctgtgtcggcgtgttagtgttcgtg 257  Q
    | | || |||||||| ||||| ||||    
T  12797389 gttttgccggcgtgtcagtgtccgtg 12797414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 13134513 - 13134444
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    ||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||| ||| |||||||||||    
T  13134513 gacacgacatcgacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggcgtg 13134444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 24613639 - 24613767
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| ||||||| | |||||  |||| ||||| ||||||||||||||||      ||||||||||| | || ||||| |||||||||  |||    
T  24613639 acggacactcctaggattagacgtgtcctggtgtcagacacgtgtcgtgtctgacaccgacatgacaccgacacttgtacttacattgaattatgtgatt 24613738  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||| ||||||| |||||    
T  24613739 ttctcaaattattagttgtgtcgacgtgt 24613767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 28964203 - 28964307
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||| ||||  || ||||||||||||     |||||| ||||| | ||||||||||||||||||  ||||| |||||||||    
T  28964203 actcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtc-----cgacacagacacttgtaattacactgaattatgtgattttttcaaattat 28964297  T
Q  230 tagctgtgtc 239  Q
    ||||| ||||    
T  28964298 tagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 35157934 - 35158062
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||| ||||||||| || ||| || ||||| |||||||||||||||      ||||||||||| |||||||||||| |||||||  |||||  ||    
T  35157934 acggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtc-----agacaccgacacttataattacactaaattatgtgatttttcca 35158028  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| || |||||||||| ||||| ||||    
T  35158029 aattattagttgcgtcggcgtgtcagtgtccgtg 35158062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 15029824 - 15029752
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| |||||||||||||||||||||||||  || || ||||||||||||| ||||| |||||| |||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgt 15029752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 233
Target Start/End: Original strand, 30982816 - 30982931
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgaca------cgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||| | ||||||||| |||||| ||||  |||| |||||||||||||||      |||||||||||| ||||||||||||||| ||||  |||    
T  30982816 acggacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgatt 30982915  T
Q  218 ttctcaaattattagc 233  Q
    ||||||||| ||||||    
T  30982916 ttctcaaatcattagc 30982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 54580023 - 54580087
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||| ||||||||||||||||||||  ||||| |||||||||||| |||||| ||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 848072 - 847938
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| ||||||||  |||||| ||||| |||| || ||||||| |||||      ||||||||||| | |||||| | ||||||||| ||||    
T  848072 acggacactccttggattaggtgtgtcccggtgttcgacacgtttcgtgtccgacaccaacaagacaccgacacttgtaattatagtgaattatgtaatt 847973  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| |  ||||||||| |||||    
T  847972 ttctcaaattattagcggcatcggcgtgtcagtgt 847938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 5775354 - 5775409
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  5775354 gacatgacaccgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 257
Target Start/End: Complemental strand, 13783342 - 13783263
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| ||||||||||||||||||||| ||  || ||||||||| |||||| ||||||| |||| ||||| ||||    
T  13783342 cacgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtg 13783263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 20743286 - 20743353
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcg 255  Q
    |||| ||| ||||||||||||||||  ||||||||||||||||| | |||||||||||| ||||||||    
T  20743286 acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgttcg 20743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 22234886 - 22234957
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||| |||||||||||||||||  | |||| ||||||| ||||| ||||||||||||    
T  22234886 gacacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgt 22234957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 32910596 - 32910525
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcataa 265  Q
    |||||||||||||||||||  ||||||||||||||||| | |||||||  |||  |||||||||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattattatccgtgtcggtatgtcggtgttcgtgcttcataa 32910525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 46160959 - 46160889
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||| ||| ||| | | ||||||||||    
T  46160959 gacacgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgt 46160889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 11596347 - 11596416
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||| |||| | ||||||||||||||||||  ||||| |||||||||||||| ||| |||||    
T  11596347 tgacacgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgt 11596416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 12895274 - 12895351
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| |||||||||||  |||||||  ||||| |||||||||||  ||||||||||||| | ||||||||    
T  12895274 cgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtg 12895351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 14126118 - 14126183
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||||||||||||||||||  | ||| ||||||||||| | ||||||||||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgt 14126183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 252
Target Start/End: Complemental strand, 19482783 - 19482655
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtct------gacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||||||||||  |||||| ||||  |||| ||||||||||       ||||||||||| |||| | ||||||||| ||||||||  || || |||    
T  19482783 actcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgatattttca 19482684  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| ||||||||||||| |||||    
T  19482683 aattattagttgtgtcggcgtgtcagtgt 19482655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 28084634 - 28084514
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct-c 222  Q
    ||||| |||||||||||||||| |||||| ||||  |||| |||||    | |||||||||| ||||| | |||||||| |||||||||  ||||| | |    
T  28084634 acggacactcctcggattaggcgtgtcccagtgtcggacacgtgtca---ccgacacgacacagacacttgtaattacattgaattatgtgatttttttc 28084538  T
Q  223 aaattattagctgtgtcggcgtgt 246  Q
    ||||| ||||||||||||||||||    
T  28084537 aaattcttagctgtgtcggcgtgt 28084514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 16073498 - 16073388
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| ||||   ||||  ||||||| |||||||     |||||||||||| | ||||||||||||||||||| ||||| |||||||||    
T  16073498 actcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtc-----cgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattat 16073405  T
Q  230 tagctgtgtcggcgtgt 246  Q
    ||  ||||| |||||||    
T  16073404 tacttgtgttggcgtgt 16073388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 30838275 - 30838191
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgc 258  Q
    ||||||||||||||| || |||||||||||| ||||||  |||||| ||||||||||||| || ||| ||| | ||||| |||||    
T  30838275 ctgacacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgc 30838191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 238
Target Start/End: Complemental strand, 16189765 - 16189710
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||| |||||||||||||||||||  ||||||||||||| ||||| ||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatttttagcggtgt 16189710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 240
Target Start/End: Original strand, 22440609 - 22440660
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||||||||||||||||||||||  ||||||||||||||||| | ||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcg 22440660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 51701321 - 51701258
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||  |||| | |||||||||| ||||||| |||||| |||||||||||||||||||    
T  51701321 gacacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 56258001 - 56257933
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||| ||||||||||| ||||||||  |||||||||||||||   ||||||||||||||||||| |||||    
T  56258001 cgtgtttgacacgacacagacacata--attacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 903971 - 903909
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||  ||||||||||||||||| | ||| ||| |||| |||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgt 903909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 251
Target Start/End: Complemental strand, 1747258 - 1747200
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtg 251  Q
    |||||||| |||||||||||  |||||||||| |||||||| |||||||||||| ||||    
T  1747258 tataattaaactgaattatgtgattttctcaatttattagcggtgtcggcgtgtaagtg 1747200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 7012129 - 7012059
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| ||||||| || ||| || |||||||||||||  ||||||||||||||||| | ||||||||||||    
T  7012129 gacacaacaccgatacctatgatcacactgaattatgtcattttctcaaattattatcggtgtcggcgtgt 7012059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 211
Target Start/End: Complemental strand, 7970589 - 7970547
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattat 211  Q
    |||||||||||||||||| | ||||||||||||||||||||||    
T  7970589 cgtgtctgacacgacaccaaaacatataattacactgaattat 7970547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 17425403 - 17425441
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  17425403 ataattacactgaattatgcgattttctcaaattattag 17425441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 35952613 - 35952683
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| || ||||||||||||| ||||||||   ||||| ||||||||||||| ||| ||||||||    
T  35952613 gacacgacactgatacatataattacattgaattatatgattttatcaaattattagcagtggcggcgtgt 35952683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 40865089 - 40865035
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| ||||||||||| |||||||| ||| |||||| ||||||||||    
T  40865089 acacgacaccgatacatataattatactgaattgtgcgattttcacaaattatta 40865035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 9996898 - 9996849
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    |||||||| ||||||||||| |||||||||||  ||||||||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 18513231 - 18513292
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| ||||| |||| ||||||||| |||||| |||||||||  |||||||||||||||||    
T  18513231 gtgtccgacacaacactgacacatatgattacattgaattatgtcattttctcaaattatta 18513292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 229
Target Start/End: Original strand, 18576033 - 18576086
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| |||||| |||||||||||||||| ||||||||  |||||||||||||||    
T  18576033 gacatgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 32273511 - 32273592
Alignment:
Q  165 gtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||| ||||| ||| || ||||||||  ||||||||||  ||||| |||||||||||| ||||| |||||||    
T  32273511 gtgtcgtgtccgactcgacatcgaaacttataattattctgaattatgttattttttcaaattattagttgtgttggcgtgt 32273592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 46083985 - 46084050
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||||||||||||||  ||||||  |||| || |||  ||||||||||||    
T  46083985 ctgacacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtc 46084050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 10499270 - 10499341
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| |||||||||||||||||| |||||||  |||||||||| || |||| |||||||| |||| |||||    
T  10499270 cgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatgtgtcggtgtgtcagtgt 10499341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 19230296 - 19230360
Alignment:
Q  169 cgtgtctgacac-gacac-cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| ||||| |||||| |||||||||| |||||||||  |||||||||||||||||    
T  19230296 cgtgtctgacaccgacacacgacacctataattacattgaattatgttattttctcaaattatta 19230360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 21345486 - 21345538
Alignment:
Q  128 atactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac 180  Q
    |||||||||||||||||||||| || ||||| || |||| |||||||||||||    
T  21345486 atactcctcggattaggcatgtaccggtgttggatatgtatcgtgtctgacac 21345538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 26504303 - 26504359
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||||||||||||| |||   ||||||| ||||||||||| ||||||    
T  26504303 accgacacatataattacactgaactatttgattttcttaaattattagcagtgtcg 26504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 29205501 - 29205445
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||| | ||||||||||||||||||  ||||| ||||||||||||| ||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 33950194 - 33950142
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||| |||||| | |||||||  |||||||||||||||||||    
T  33950194 gacaccgacacatatgattacattaaattatgtgattttctcaaattattagc 33950142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 37698759 - 37698719
Alignment:
Q  192 atataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  37698759 atataattacactgaattatataattttctcaaattattag 37698719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 244
Target Start/End: Complemental strand, 40742654 - 40742586
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||| |||||||||||||||||||  |||||   |||||||||||||||||   ||||||||||    
T  40742654 gacacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgt 40742586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 7214523 - 7214574
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||| |||||||||||| | |||||||  ||||||||||||||||||    
T  7214523 gacaccgacgcatataattacattaaattatgtgattttctcaaattattag 7214574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 16303263 - 16303338
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| | |||||||||| ||||||   ||||| ||||| ||||| || ||||||||||| |||||    
T  16303263 acacgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgt 16303338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 38148722 - 38148785
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||| |||||  || |||||||||||||||||  ||||||||||| ||||||| ||||||    
T  38148722 acacgacatcgacatttaaaattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 40179636 - 40179687
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||| ||||||||||||||||||||||  ||||| ||||| |||||    
T  40179636 cgacaccgacgcatataattacactgaattatgtgattttttcaaactatta 40179687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 42640588 - 42640519
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaa---ttttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||||||||||||||||  |   |||| ||||||||| ||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgt 42640519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 46180944 - 46180995
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||| ||||||||||||||||  ||||||||||||||||  |||||||    
T  46180944 acacatatgattacactgaattatgttattttctcaaattattgtctgtgtc 46180995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 31800477 - 31800555
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| |||||||| | |||||||| | ||||||  |||||| | ||||||||||||||||||| ||||  |||||||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgttcgtg 31800555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 38847012 - 38847078
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| ||||| | |||||||||||||| ||   ||||| ||||||||||||||||||||| ||||    
T  38847012 cgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgt 38847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 3712507 - 3712568
Alignment:
Q  179 acgacacc-gacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||| |||||||||||||||| |||||||    ||||||||||||||||||| |||||    
T  3712507 acgacaccagacacatataattacattgaattacatgattttctcaaattattagcggtgtc 3712568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 16402224 - 16402285
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttc 254  Q
    ||||||||||||| || |||  ||||||||||||||||| | |||||||| ||| |||||||    
T  16402224 tataattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttc 16402285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 30103358 - 30103406
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    ||||||||||||||| |||||||| |||||||  ||||||||||||||||    
T  30103358 gacaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 40481680 - 40481624
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||  ||||| |||||||||||| ||| ||||||||| |||||    
T  40481680 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgt 40481624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 43299973 - 43300022
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| || |||| |||||| ||||||||| ||||||||||||||||||    
T  43299973 acaccggcagatatgattacattgaattatgtaattttctcaaattatta 43300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 43300669 - 43300624
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| |||| |||||| ||||||||| ||||||||||||||||||    
T  43300669 cgacaaatatgattacattgaattatgtaattttctcaaattatta 43300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 44132641 - 44132674
Alignment:
Q  177 acacgacaccgacacatataattacactgaatta 210  Q
    |||||||||||||||||||||||| |||||||||    
T  44132641 acacgacaccgacacatataattatactgaatta 44132674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 50280946 - 50280874
Alignment:
Q  176 gacacgacaccgacacatataattacac--tgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| ||| | |||||||||  | |||||||  | ||| ||||||||||||||||||||||||||    
T  50280946 gacacgacaccggcacttgtaattacacacttaattatgtgaatttttcaaattattagctgtgtcggcgtgt 50280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 4383430 - 4383355
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| ||||  | ||||||||||||||||||  ||||| |||||||||||| ||| ||| ||||| |||||    
T  4383430 gacacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgt 4383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 5225610 - 5225662
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    ||||||||||||||||||| ||| || |||||||||  ||| |||||||||||    
T  5225610 acacgacaccgacacatattattgcattgaattatgtcattatctcaaattat 5225662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 17345451 - 17345487
Alignment:
Q  216 ttttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||| |||||||||||| |||||    
T  17345451 ttttctcaaattattagcggtgtcggcgtgtcagtgt 17345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 20950428 - 20950456
Alignment:
Q  181 gacaccgacacatataattacactgaatt 209  Q
    |||||||||||||||||||||||||||||    
T  20950428 gacaccgacacatataattacactgaatt 20950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 22596987 - 22597031
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||| | |||||  ||||||||||||||||||||||||||||    
T  22596987 gacacatgtgattacgttgaattatgcaattttctcaaattatta 22597031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 28720894 - 28720858
Alignment:
Q  221 tcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  28720894 tcaaattattagctgtgtcggcatgtcagtgttcgtg 28720858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 29205572 - 29205528
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc 174  Q
    |||||||||||||||| |||||| ||||  |||||||||||||||    
T  29205572 actcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtc 29205528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 31243555 - 31243599
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| ||| ||||||||||||||||  |||||||||||||||||    
T  31243555 gacacctatgattacactgaattatgtcattttctcaaattatta 31243599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 3e-27; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 27505361 - 27505243
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||||||||||||||| ||||  |||| |||||||||| |||||||||||||||| | |||||||||| |||||||  |||||   |    
T  27505361 acggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtgatttttaaa 27505262  T
Q  224 aattattagctgtgtcggc 242  Q
    |||||||||||||||||||    
T  27505261 aattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 257
Target Start/End: Complemental strand, 10955057 - 10954934
Alignment:
Q  129 tactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    ||||||||||||||||| |||||| ||||  |||| ||||||||||     |||||||||||| | | ||||||||||||||||  ||||| ||||||||    
T  10955057 tactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtgattacactgaattatgtgattttttcaaatta 10954963  T
Q  229 ttagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||||||||||| ||||||||||    
T  10954962 ttagttgtgtcggcgtgtcagtgttcgtg 10954934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 124 - 252
Target Start/End: Complemental strand, 20503575 - 20503452
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| |||| ||||||||||||||||     | |||||||||| | ||||||||||||||||||  ||||| |||    
T  20503575 acggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtc-----caacaccgacacttgtaattacactgaattatgtcattttttca 20503481  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| | ||||||||||||| |||||    
T  20503480 aattatttgttgtgtcggcgtgtcagtgt 20503452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 8039831 - 8039901
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  8039831 gacacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgt 8039901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 28918107 - 28917994
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||| ||||||||| |||||| ||||  |||| ||||||||||   |||||||||||||| | ||||||||||||||||||  ||||| |||||||||    
T  28918107 actccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtc---cacgacaccgacacttgtaattacactgaattatgtgattttttcaaattat 28918011  T
Q  230 tagctgtgtcggcgtgt 246  Q
    ||||| |||||||||||    
T  28918010 tagctatgtcggcgtgt 28917994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 124 - 254
Target Start/End: Original strand, 4987229 - 4987365
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtct------gacacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||||||||||| |||||| ||||  |||| ||||||||||       |||||| |||| |||| | ||||||||||||||||||  |||    
T  4987229 acggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgatt 4987328  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgttc 254  Q
    || |||||||||||||||||||||||||| |||||||    
T  4987329 ttttcaaattattagctgtgtcggcgtgtcagtgttc 4987365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 5440976 - 5441103
Alignment:
Q  124 acggatactcctcggattaggca-tgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||||||| |||||||  |||| | ||||| ||||||||||||||||||||| ||||||||||  |||||| || |||||||||  ||||||||    
T  5440976 acggacactcctcgaattaggccgtgtctcggtgttggacatgtgtcgtgtctgacacaacaccgacac--ataattccattgaattatgtgattttctc 5441073  T
Q  223 aaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||| ||| |||||||| |||||    
T  5441074 aaatttttagcggtgacggcgtgtcagtgt 5441103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 9800103 - 9800022
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| || |||||||| |||||||| |||||||||||||||||||  |||||||||||| ||||| ||||    
T  9800103 gacacgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtg 9800022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 252
Target Start/End: Complemental strand, 21479198 - 21479105
Alignment:
Q  160 gacatgtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| ||||| |||||||||||   ||||||||||||||| ||  ||||| |||||||||||||||||||||||||| |||||    
T  21479198 gacatgtgtcgtgtccgacaccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 21479105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 25093561 - 25093489
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||| |||| | ||||||||||||||||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgt 25093489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 40993290 - 40993396
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctcaaatta 228  Q
    |||||||||||||||| |||||| ||||  |||||||||||||||     |||||||||||||||||||||||||||||||||  | |||| | ||||||    
T  40993290 actcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----cgacaccgacacatataattacactgaattatgtgattttttttaaatta 40993384  T
Q  229 ttagctgtgtcg 240  Q
    ||||| ||||||    
T  40993385 ttagcggtgtcg 40993396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 8383316 - 8383250
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||||||| ||||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgt 8383250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 35223048 - 35222931
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||| | || ||||||||||| ||||| ||||| ||||     ||||||||||||||||||||||| |||||||||  ||||||| |    
T  35223048 acggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtc-----cgacaccgacacatataattacattgaattatgtgattttctaa 35222954  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    || | |||| |||||||||||||    
T  35222953 aaatgttagttgtgtcggcgtgt 35222931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 7928509 - 7928448
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 8789497 - 8789616
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgt--cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct 221  Q
    ||||| |||||||||||||||| |||| | ||||  |||||||||  ||||||     |||||||||||||||||||||||| ||||||||  |||||||    
T  8789497 acggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtc-----cgacaccgacacatataattacacggaattatgtgattttct 8789591  T
Q  222 caaattattagctgtgtcggcgtgt 246  Q
    |||||||| ||| ||||||| ||||    
T  8789592 caaattataagccgtgtcggtgtgt 8789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 55401185 - 55401057
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||| | ||||  |||| ||||||||||     |||||||||||| | |||||||||| |||||||  ||||| |||    
T  55401185 acggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtaattacactaaattatgtgattttttca 55401091  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| ||||||||||| | ||||| ||||    
T  55401090 aattattagttgtgtcggcgtatcagtgtccgtg 55401057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 25948876 - 25948964
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||  ||||| ||||||||||||| || ||||| ||| ||||| ||||    
T  25948876 cgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtg 25948964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 11666006 - 11665931
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||| |||| ||  ||||| |||||||||||||  |||||| ||||||||||    
T  11666006 acacgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgt 11665931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 16192746 - 16192816
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||| | |||||||||||||||||||||||||  ||||||||||||||||| | ||||||| ||||    
T  16192746 gacacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgt 16192816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 4990964 - 4991033
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||| ||||||| | |||||||||||||||||| |||||||||||| ||||||| ||||||| ||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgt 4991033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 11313796 - 11313861
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||  ||||||||||||||||| |||||||  ||||||||||||||||||| |||||||    
T  11313796 gacacgacactaacacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 14829752 - 14829677
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| | |||||||  |||||||||  ||||| |||||||||||||||||||||||||| |||||    
T  14829752 gacacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgt 14829677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 34307765 - 34307852
Alignment:
Q  165 gtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||||| ||||  ||||||||||||||||||| ||||| ||||||| ||||    
T  34307765 gtgtcgtgtccgacaccgacac-gacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgt 34307852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 15999959 - 16000088
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc--tgacacgacaccgacacatataattacactgaattatgcaattttct 221  Q
    ||||| |||||| ||||||||| |||||| ||||  |||| |||||||||   || | |||||||||||| | || |||||||||||||||  ||||| |    
T  15999959 acggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtc-cgacaccgacacttgtagttacactgaattatgttatttttt 16000057  T
Q  222 caaattattagctgtgtcggcgtgttagtgt 252  Q
     |||||||||| ||||||||||||| |||||    
T  16000058 taaattattagttgtgtcggcgtgtcagtgt 16000088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 24205047 - 24205118
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||| | |||||||||||| ||||| ||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 24205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 26508166 - 26508103
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||| | ||||||||||||||||||  ||||| ||||||||||||||||||| ||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgt 26508103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 28812630 - 28812508
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||||||||||| |||||   |||  ||||||| |||||||||||||      ||||||||||| | ||| ||||||||||||||  ||||  |||    
T  28812630 actcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgatttcttca 28812531  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    ||||||||| |||||||||||||    
T  28812530 aattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Complemental strand, 34910377 - 34910310
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| | | ||||||||||||||||||  ||||| |||||||||||| |||||||||||||    
T  34910377 acgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 242
Target Start/End: Original strand, 49651725 - 49651848
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctg-----acacgacaccgacacatataattacactgaattatgcaattt 218  Q
    ||||| ||| |||||||||||  |||||| ||||  || |||||||||||| |     ||||||||||||||| | |||||||| |||||||||  ||||    
T  49651725 acggacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaattatgtgattt 49651824  T
Q  219 tctcaaattattagctgtgtcggc 242  Q
    | ||||||||||||| ||||||||    
T  49651825 tttcaaattattagccgtgtcggc 49651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 14209176 - 14209106
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||| | ||||||||||||||||||  ||||| | |||||||||| |||||||||||||    
T  14209176 gacacgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 20691377 - 20691327
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 34185119 - 34185189
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| | ||||||||||||||| ||  ||||| | ||||||||||| ||||||||||||    
T  34185119 gacacgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 49505154 - 49505220
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| |||||||||||||||||| |||||||  ||||||||||||||||||| || || ||||||    
T  49505154 cgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgt 49505220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 241
Target Start/End: Original strand, 7614415 - 7614476
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||| ||||||||| |||||||||||  ||||||| ||||||||| |||||||||    
T  7614415 cgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 8587021 - 8587098
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||||| |||||||  ||||| |||||||| ||| ||||||||||||| ||||| ||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtg 8587098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 11658868 - 11658823
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattatta 11658823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 14979224 - 14979175
Alignment:
Q  196 aattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    |||||||||||||||||  ||||| |||||||||||||||||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 15796291 - 15796360
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||  | |||||||||||||||||   ||||| ||||||||||| ||||||||||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgt 15796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 257
Target Start/End: Original strand, 26492162 - 26492282
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| | ||||   |||| ||||||||||||||||     ||||||||| || | ||||||||||||||| |   ||||| |||||||||||    
T  26492162 tcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtc-----cgacaccgatacttgtaattacactgaattgtatgattttttcaaattatta 26492256  T
Q  232 gctgtgtcggcgtgttagtgttcgtg 257  Q
    ||| ||||||||||| ||||| ||||    
T  26492257 gctctgtcggcgtgtcagtgtccgtg 26492282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 29508560 - 29508451
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacga-caccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| ||| || ||||||| | |||||| ||||  ||| ||||||||||| ||||| | || ||||||||||||||||||||||||||   ||||| ||    
T  29508560 acggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatgattttttc 29508461  T
Q  223 aaattattag 232  Q
    ||||||||||    
T  29508460 aaattattag 29508451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 1509599 - 1509539
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||| | |||||||||| |||||||  ||||| |||||||||||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 8039271 - 8039199
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||| |||||||||| ||| |||||| ||||| |||| ||||||||||||||| | | ||||||||||||    
T  8039271 ctgacacaacaccgacacctatgattacattgaatcatgccattttctcaaattatcatcagtgtcggcgtgt 8039199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 10690209 - 10690321
Alignment:
Q  132 tcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacac-----cgacacatataattacactgaattatgcaattttctcaaat 226  Q
    |||||||||||||  |||| |||||| ||||| |||| ||||| ||||| | ||     ||||| |||||||||||||||||||||  ||||||||| ||    
T  10690209 tcctcggattaggtgtgtcgccgtgtcagacacgtgttgtgtccgacactaaacaataccgacaaatataattacactgaattatgtgattttctcagat 10690308  T
Q  227 tattagctgtgtc 239  Q
    ||||||| |||||    
T  10690309 tattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 12704056 - 12704000
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||   |||||||||||||||||  ||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 13807227 - 13807151
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||| |||| | |||||||||  ||||||||||||| ||| | |||| ||||||||||| ||||||    
T  13807227 gacaccgacacatattattatattgaattatgtgattttctcaaattgttatcagtgttggcgtgttagttttcgtg 13807151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Complemental strand, 14832162 - 14832074
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    |||||||||| ||||| | |||||||| ||| |||||  ||||| |||||||||||||||| |||||||||  || | |||||||||||    
T  14832162 gacacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtgcttcata 14832074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 29386508 - 29386552
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttct 221  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||    
T  29386508 acacgacaccgacacatatgattacactgaattatgcagttttct 29386552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 3618937 - 3618881
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||  ||||| |||||||||| |||||||||||||||||||| |||||    
T  3618937 gacaccgacacata--attacgctgaattatggaattttctcaaattattagcggtgtc 3618881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 10268487 - 10268558
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||| | |||||||||| |||||||  ||||| ||||||||||| |||||||||||||| |||||    
T  10268487 gacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgt 10268558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 32804547 - 32804602
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||||| |||||||  ||||||||||||||||| | ||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggc 32804602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 41961588 - 41961722
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctga------cacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||| |||||||||||| |||||| ||||  |||| |||||||||| ||      |||||||||||||| | ||||||||| |||| |||  ||     
T  41961588 acggacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgata 41961687  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    || |||||||||||| |||| |||||||| |||||    
T  41961688 ttttcaaattattagttgtgacggcgtgtcagtgt 41961722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 51206353 - 51206412
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||| | || |||||||||||||||  ||||| |||||||||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 1550205 - 1550135
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||||||| ||||| ||||||||||||||||  ||  ||||| ||||||||||||| |||| |||||    
T  1550205 ctgacacgacactgacacctataattacactgaatagtgtgattttttcaaattattagcggtgttggcgt 1550135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 14028067 - 14028005
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||||||||||||||||||| ||| ||  ||||||| |||  ||||||||||||||    
T  14028067 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcgg 14028005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 18427008 - 18426942
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||||||||||| ||||||||  ||||| | ||||||||||  ||||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgt 18426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 238
Target Start/End: Complemental strand, 45451627 - 45451554
Alignment:
Q  160 gacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||||||||     |||||||||||||||| |||| |||||| ||||  ||||||||||||||||||| ||||    
T  45451627 gacatgtgtcgtgtc-----cgacaccgacacatattattatactgaagtatgtgattttctcaaattattagcagtgt 45451554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 1514671 - 1514610
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||| |||||||||||| ||||||||  || | ||||||||||||| ||||||||||||    
T  1514671 ccgacacttataattacactaaattatgcgtttctttcaaattattagcggtgtcggcgtgt 1514610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 4466600 - 4466677
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||| ||||||||  |||||||||||||   ||||||| ||||||||| | ||||||| |||| ||||||||||    
T  4466600 cgacaccggcacatatagctacactgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtg 4466677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Original strand, 5407260 - 5407313
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| |||||||||  ||||||||||||| ||||| ||||||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgt 5407313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 10455852 - 10455783
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||||||||||||||| | ||||   ||||||||| ||||||||| |||| |||||||    
T  10455852 acacgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgt 10455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 11252034 - 11251984
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||||||||||    
T  11252034 gacaccgacacata--attacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 14747625 - 14747548
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttct-caaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| ||| | | |||||||||| |||||||  ||||| | ||||||||||||||||||||||||| |||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgt 14747548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 21256984 - 21257045
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||| |||||||| | |||||| |||||||||||  ||||| |||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 21720807 - 21720746
Alignment:
Q  196 aattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||  || |||||||||||||| | |||||||||||| ||||| ||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 24633360 - 24633460
Alignment:
Q  134 ctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||| ||||||| ||| || |||||||||| ||||||||||     | ||||||||||||||||||||| ||||||| |  |||||  |||||||||| |    
T  24633360 ctcgaattaggcgtgtaccggtgttagacaagtgtcgtgtc-----caacaccgacacatataattacattgaattacgtgatttttccaaattattaac 24633454  T
Q  234 tgtgtc 239  Q
    ||||||    
T  24633455 tgtgtc 24633460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 25652039 - 25652108
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||| |||||||||||||   ||||||||||||||||| | |||| ||||||||||||| ||||    
T  25652039 acacctataactacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtg 25652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 252
Target Start/End: Complemental strand, 26290431 - 26290358
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| |||||||||||||| || ||| ||||  |||||||||||||||||   |||||||||||| |||||    
T  26290431 acgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgt 26290358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 38731277 - 38731224
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||||||||||| ||||||||||||||  ||||| | |||||||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagc 38731224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 3631794 - 3631711
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg 212  Q
    ||||| |||||||||| ||||| |||||  ||||  |||||||||||||||     |||||| | ||||||||||||||||||||||||    
T  3631794 acggacactcctcggactaggcgtgtcctggtgtcggacatgtgtcgtgtc-----cgacactggcacatataattacactgaattatg 3631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 9624689 - 9624641
Alignment:
Q  191 catataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||| |||||||||  ||||||||||||||||||| |||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 16789668 - 16789712
Alignment:
Q  198 ttacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggc 16789712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 35994744 - 35994799
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||| | ||||||||||||||||||  ||||| ||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggc 35994799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 40052367 - 40052319
Alignment:
Q  204 tgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||  ||||| |||||||||||||||||||||||||| |||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 40052319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 245
Target Start/End: Original strand, 3164043 - 3164090
Alignment:
Q  198 ttacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    |||||||||||||||  ||||| |||||||||||||||||||| ||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtg 3164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 11493372 - 11493427
Alignment:
Q  191 catataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||  ||||||||| ||||||||  |||||| |||||    
T  11493372 catataattacactgaattatgtgattttctcacattattagtggtgtcgacgtgt 11493427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 15314873 - 15314924
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaatta 228  Q
    |||||||||| ||||||||||||||||| |||||||  ||||| ||||||||    
T  15314873 acacgacaccaacacatataattacactaaattatgtgattttttcaaatta 15314924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 17005616 - 17005671
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||| |||||||||| |||||||||||||||||||   ||||| ||||||||||||    
T  17005616 acacaacaccgacacttataattacactgaattatatgattttatcaaattattag 17005671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 25211602 - 25211539
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||||||||||||||| || | ||  || |||||||||||| ||| |||||    
T  25211602 gacacgacaccgacacatataattacacttaactgtgtgatattctcaaattatcagcagtgtc 25211539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 28678365 - 28678290
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||| ||||| ||| |||||||  ||||| | ||||||||||| | |||||| ||| |||||    
T  28678365 acacgacaccgacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgt 28678290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 252
Target Start/End: Complemental strand, 1438853 - 1438791
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| |||||||||||  ||||||||||||| |||||  |||||| |||| |||||    
T  1438853 acatataattatactgaattatgtgattttctcaaattgttagcgatgtcggtgtgtcagtgt 1438791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 27513652 - 27513714
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatg-caattttctcaaattatta 231  Q
    ||||| |||| ||||||||||||||| |||||| ||||| ||| || ||||||||||||||||    
T  27513652 gtgtccgacaagacaccgacacatatgattacattgaataatgtcatttttctcaaattatta 27513714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 40150572 - 40150622
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||| |||||| ||||||||   |||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatta 40150622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 3865592 - 3865633
Alignment:
Q  216 ttttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 3865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 10318035 - 10318111
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| |||| ||||||| ||  |||  | ||| |||||||||||||||||||||||||| ||||| ||||    
T  10318035 cgacaccgacacttatatttacactaaaa-atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 10318111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 10335286 - 10335363
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | || ||||||| || ||||  | ||| |||||||||||| ||||||||||||| ||||| ||||    
T  10335286 cgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 10335363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 13799561 - 13799512
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||| |||||||| |||||||  ||||||||||| |||||    
T  13799561 acaccgacacatattattacacttaattatgtcattttctcaaactatta 13799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 13845474 - 13845550
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactg 205  Q
    ||||| |||||| |||| |||| |||| |||||| ||||| || |||||||     ||||||||||||||||||||||||||    
T  13845474 acggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtc-----cgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 16789077 - 16789040
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattat 211  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  16789077 ctgacacgacaccaacacttataattacactgaattat 16789040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 21211333 - 21211296
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  21211333 ataattacactgaactatgtaattttctcaaattatta 21211296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 25074831 - 25074782
Alignment:
Q  197 attacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||| |||||||  ||||||||||||||||| | ||||||||||||    
T  25074831 attacactcaattatgtcattttctcaaattattatcggtgtcggcgtgt 25074782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 25775568 - 25775495
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaatt-ttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | ||||||||||||||||||  ||| || |||||||||||  ||||| ||||||| |||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgt 25775495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 239
Target Start/End: Original strand, 27277852 - 27277897
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||| |||||||  ||||||||||||||||||| |||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 32429376 - 32429457
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| |||||||| |  ||||||| ||||||||||||  ||||||| |||||||||||  |||||| |||| | ||||||||    
T  32429376 gacatgacaccgatatttataattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtg 32429457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 231
Target Start/End: Complemental strand, 52369828 - 52369783
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||| |||||| ||||||||| ||||||||||||||||||    
T  52369828 cgacacctatgattacattgaattatgtaattttctcaaattatta 52369783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 2941655 - 2941592
Alignment:
Q  137 ggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactg 205  Q
    |||| |||||| ||||| ||| ||||| ||||||||||     ||||||||||||||||||||||||||    
T  2941655 ggataaggcatatccccatgtcagacacgtgtcgtgtc-----cgacaccgacacatataattacactg 2941592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 14216954 - 14216874
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| ||||| | |||||||||||||||||   || || | |||||||||| ||||||| ||||| ||||| ||||    
T  14216954 acacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtg 14216874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 14223083 - 14223003
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||| ||||| | |||||||||||||||||   || || | |||||||||| ||||||| ||||| ||||| ||||    
T  14223083 acacgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtg 14223003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 246
Target Start/End: Complemental strand, 25064954 - 25064902
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||||||  ||||| |||||| |||||| ||||||||||||    
T  25064954 ataattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgt 25064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 26917330 - 26917298
Alignment:
Q  179 acgacaccgacacatataattacactgaattat 211  Q
    ||||||| |||||||||||||||||||||||||    
T  26917330 acgacactgacacatataattacactgaattat 26917298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 27764772 - 27764716
Alignment:
Q  174 ctgacacgacaccgacacatataa-ttacactgaattatgcaattttctcaaattat 229  Q
    |||||| ||||||||| ||||||| ||||| ||||||||  ||||||||||||||||    
T  27764772 ctgacatgacaccgacccatataaattacattgaattatataattttctcaaattat 27764716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 48353731 - 48353783
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||| ||||||||||||| | ||||||   ||||||||||||||||||    
T  48353731 cgacaccgatacatataattacaattaattatttgattttctcaaattattag 48353783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 135302 - 135384
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||| ||||| ||||    
T  135302 gtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgt 135384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 137845 - 137789
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    ||||||||||||| |||||||| | ||||||||||| ||  ||||||| ||||||||    
T  137845 ctgacacgacaccaacacatatgactacactgaattgtgtgattttcttaaattatt 137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 87)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 44860382 - 44860320
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 2438668 - 2438783
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||| |||||| ||||  |||||||||||||||     |||||||||||| | ||||||||||||||||||  ||||| | |    
T  2438668 acggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatgtgattttttga 2438762  T
Q  224 aattattagctgtgtcggcgt 244  Q
    |||||||||||||||| ||||    
T  2438763 aattattagctgtgtcagcgt 2438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 18840962 - 18841085
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||  |||||| ||||  ||||||||||||||||||||     ||||||| | |||||||||| ||||||| |||||| |||    
T  18840962 acggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgaca-----ccgacacttgtaattacacttaattatgtaattttttca 18841056  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| |||||| |||||| |||||    
T  18841057 aattattagttgtgtcagcgtgtcagtgt 18841085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 21374714 - 21374776
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 21374776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 15909629 - 15909704
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||| | |||||||| ||||||||| |||||    
T  15909629 acacgacactgtcacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgt 15909704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 12668419 - 12668489
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||| | |||||||||||    
T  12668419 gacacgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 252
Target Start/End: Original strand, 20242682 - 20242799
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| |||||| |||| ||||| ||||| ||||| |||| |||||     |||||||||||||||||||||||||||||||||  ||||||| |||  ||    
T  20242682 actcttcggataaggcgtgtcctcgtgtcagacacgtgttgtgtc-----cgacaccgacacatataattacactgaattatgtgattttctaaaaaaat 20242776  T
Q  230 tagctgtgtcggcgtgttagtgt 252  Q
    ||| ||||||||||||| |||||    
T  20242777 tagttgtgtcggcgtgtcagtgt 20242799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 21616813 - 21616755
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 21616755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 23718082 - 23718008
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||| |||| ||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 23718008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 183 - 257
Target Start/End: Complemental strand, 24105754 - 24105680
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||| |||| ||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 24105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 34784926 - 34785059
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctga------cacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||| || |||| ||||||||||| ||||| |||||||||| ||      ||||||||||||||||||||||||||| |||||||  ||||||| |    
T  34784926 actcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgattttctaa 34785025  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||  ||||| |||||||| |||| ||||| ||||    
T  34785026 aaaaattagttgtgtcggtgtgtcagtgtccgtg 34785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 11223802 - 11223929
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||||||| |||||||| |||||| |||| ||||| |||||||||| |||||      ||||||||||| | ||||||||||||||||||  |||    
T  11223802 acggacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttatt 11223900  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    || ||||| ||||||||||||| ||||||    
T  11223901 ttttcaaaatattagctgtgtcagcgtgt 11223929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 21782817 - 21782891
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||||||| ||||||  ||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||    
T  21782817 acacgacaccggcacata--attacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtt 21782891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 42832277 - 42832342
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||| ||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgt 42832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 14996174 - 14996301
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttct-caaatta 228  Q
    |||||||||||||||| ||| || |||| ||||| |||| ||||| |||| ||||||||||| | |||||||||| ||||||   ||||| | |||||||    
T  14996174 actcctcggattaggcgtgttccggtgtcagacacgtgt-gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaatta 14996272  T
Q  229 ttagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| ||| ||||| ||||    
T  14996273 ttagctgtgtcggcttgtcagtgtccgtg 14996301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 24975321 - 24975385
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  24975321 gacacgacaccgacgcatatatttacactgaattatacgattttctcaaattattagcggtgtcg 24975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 28677982 - 28677904
Alignment:
Q  166 tgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||  ||||| ||||||||||||| ||||||||||    
T  28677982 tgtcgtgtttgacaccgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 29970545 - 29970608
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||| |||||||||| ||||||||||| ||||| ||||||||||||||||||| |||||    
T  29970545 gacacgacatcgacacatatgattacactgaactatgcgattttctcaaattattagcggtgtc 29970608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 30404813 - 30404927
Alignment:
Q  138 gattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtg 237  Q
    ||||||||||||||  ||||  |||||||||||||||     |||| ||||||| | ||||||||||||||||||  ||||| ||||||||||| | |||    
T  30404813 gattaggcatgtcctggtgtcggacatgtgtcgtgtc-----cgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtg 30404907  T
Q  238 tcggcgtgttagtgttcgtg 257  Q
    ||||||||| ||||| ||||    
T  30404908 tcggcgtgtcagtgtccgtg 30404927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 36756341 - 36756416
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| ||||||||||||||||||||  ||||  |||||||||||| ||||||| ||||| |||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgt 36756416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 37411244 - 37411306
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    ||||| ||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||    
T  37411244 cgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggc 37411306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 15972932 - 15972855
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | ||||||||||||||| || |||||| |||||||||||  ||||||||||||| ||||| ||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtg 15972855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 18276579 - 18276518
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||| ||||||||||||||||| |  ||||||||||||||||||| ||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggc 18276518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 21624326 - 21624253
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgc-aattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | ||||||||||||||||||| | |||| | |||||||||||||||||||||||| |||||    
T  21624326 cgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgt 21624253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 37559036 - 37558959
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||| |||||||||  |||||  ||||||||||||||||||||||||| ||||| ||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtg 37558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 5367251 - 5367199
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  5367251 cgacaccgacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 15657926 - 15657846
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||  | ||||||||||||||||||  |||||  ||||||||||| || |||||||||||||||| ||||    
T  15657926 acacgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtg 15657846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 31284106 - 31284030
Alignment:
Q  182 acaccgacacata-taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||| |||||||| || ||||||  ||||||||||||||||||| |||||||||||| ||||| ||||    
T  31284106 acaccgacacataataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtg 31284030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 252
Target Start/End: Original strand, 38117108 - 38117231
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| || ||||||||||||| |||||| ||||  |||| |||| |||||     ||||||| |||| | ||||||||| ||| ||||  ||||| |||    
T  38117108 acggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtc-----cgacaccaacacttgtaattacaccgaagtatgtgattttttca 38117202  T
Q  224 aattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||||||| |||||    
T  38117203 aattattagctgtgtcggcgtgtcagtgt 38117231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 20539672 - 20539751
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||| | |||||||||| ||||||   ||||| |||||||||||||||||||| ||||| ||||| ||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtg 20539751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 24894458 - 24894371
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| ||||||| ||| |||| | ||||| ||||||||||||  ||||| | |||||||||||||||||||||||| ||||| ||||    
T  24894458 gtgtccgacacgaaaccaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtg 24894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 257
Target Start/End: Complemental strand, 41843550 - 41843423
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    ||||||||||| | || |||||||||||  |||| |||||| ||| ||||| ||||||||||||||||||| || ||||||||  |||| || |||   |    
T  41843550 actcctcggataaagcgtgtccccgtgtcggacacgtgtcgcgtccgacacaacaccgacacatataattataccgaattatgtgatttcctaaaaaatt 41843451  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||| | ||||||||||| ||||| ||||    
T  41843450 tagttttgtcggcgtgtcagtgtccgtg 41843423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 18420430 - 18420500
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||||||||| ||||||| || |||||||||  ||||||||||||||||||| |||| |||||||    
T  18420430 gacacaacaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgt 18420500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 31808134 - 31808064
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||| ||||||||||||||||||||||||||  ||||| | ||||||||||| ||||||| |||| |||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgt 31808064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 184 - 257
Target Start/End: Complemental strand, 6940310 - 6940237
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||| | |||||||||| ||||||| || ||| | |||||||||||||||||||||||| ||||| ||||    
T  6940310 accgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 6940237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 30335476 - 30335399
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||  | |||||||||| |||||||  ||||| |||||||||||| |||||||||||| |||||| ||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtg 30335399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 30717526 - 30717591
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||| |||||| | ||||||||||||||||||  ||||| |||||||||||||| ||||||    
T  30717526 gacacgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcgg 30717591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 34691805 - 34691858
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||||||||||||||||||||   ||||| |||||||||||||    
T  34691805 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34691858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 233
Target Start/End: Original strand, 34714217 - 34714270
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||||||||||||||||||||   ||||| |||||||||||||    
T  34714217 cgacaccgacacatataattacactgaattatatgattttatcaaattattagc 34714270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 896270 - 896198
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||| ||||||||||| |||||| |||| ||||  ||||||||||| ||||||| |||||||||||| |||||    
T  896270 cgacgccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 10535765 - 10535829
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagt 250  Q
    |||||| ||| ||||||||||||||||  ||||||||||||||||| | |||||||||| |||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagt 10535829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18889592 - 18889644
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    ||||||||||||||| ||||||||||||||||  |||||||||| ||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttattagc 18889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 30527591 - 30527667
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||||| | |||| || |||| |||||    
T  30527591 gacacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgt 30527667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 31018649 - 31018577
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| |||||||||||| ||| |||  ||||||| ||||||||||| |||| ||||||| |||||    
T  31018649 cgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgt 31018577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 39279732 - 39279668
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||||||||   ||||||||| ||||||| | |||| |||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgt 39279668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 18589255 - 18589187
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagt 250  Q
    |||||| |||||||||| ||| |||||||| || ||||||||  |||||||||| ||||||||||||||||    
T  18589255 cgacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagt 18589187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 19536397 - 19536464
Alignment:
Q  180 cgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||||||||||||||||  | |||| |||||||||||| |||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgt 19536464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 211
Target Start/End: Complemental strand, 35056931 - 35056896
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattat 211  Q
    ||||||||||||||||||||||||||||||||||||    
T  35056931 gacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 36096331 - 36096441
Alignment:
Q  142 aggcatgtccccgtgttagacatgtgtcgtgtctgaca------cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctg 235  Q
    |||| ||||||||||| ||||| |||||||||| ||||      ||||||||||| |||||||||||||| ||| ||  ||||||| |||   |||||||    
T  36096331 aggcgtgtccccgtgtcagacacgtgtcgtgtccgacatcgacacgacaccgacaaatataattacactgcattttgtgattttctaaaaaatttagctg 36096430  T
Q  236 tgtcggcgtgt 246  Q
    |||||||||||    
T  36096431 tgtcggcgtgt 36096441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 974820 - 974746
Alignment:
Q  166 tgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||  ||||||||||||||| | |||||||||||||| |||  || || |||||||||||| |||||||    
T  974820 tgtcgtgtccaacacgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 2331857 - 2331802
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||||||||| |  ||||||||||||||  |||||||||||||||||    
T  2331857 ctgacacgacaccgacacataaa--tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 23921299 - 23921261
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 24009405 - 24009289
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||| |||| |||| ||||||||||| ||||| ||||||||||     ||||||||||||||| | |||||||| ||| ||  ||||||| |    
T  24009405 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtc-----cgacaccgacacata-atttacactgcattttgtgattttctaa 24009312  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    ||  ||||||||||||| |||||    
T  24009311 aaaaattagctgtgtcgccgtgt 24009289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 28524488 - 28524418
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtt 247  Q
    |||| ||| |||||||||||||||||||||||||||  |||| | |||| | |||||||| ||||||||||    
T  28524488 acacaacaacgacacatataattacactgaattatgtgatttgcacaaaattttagctgtatcggcgtgtt 28524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 35449565 - 35449499
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||| | |||| ||| ||| ||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtt 35449499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 39323308 - 39323246
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||| ||| | ||||| ||||    
T  39323308 taattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtg 39323246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 18422022 - 18421945
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | ||||||||||||||||||  || || | |||||||||  ||||||||||||| ||||| ||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtg 18421945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 18622670 - 18622613
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||| |||| ||||||||||||||||||||  ||||| | ||||||||||    
T  18622670 tgacacgacaccaacacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 19574024 - 19573971
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||  ||||||| ||||||||| | ||||||||||||    
T  19574024 tataattacactgaattatgttattttcttaaattattatcggtgtcggcgtgt 19573971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 27460070 - 27460013
Alignment:
Q  196 aattacactgaattatg-caattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||||||||| || |||| |||||||||||||||||||||||||| |||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgt 27460013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 28121551 - 28121600
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  28121551 acaccaacacatataattacattgatttatgccattttctcaaattatta 28121600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 38355888 - 38355933
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaat 226  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||    
T  38355888 gacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 44605141 - 44605190
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||| |||||||| |||||||||  |||||||||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatta 44605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 37419806 - 37419730
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| ||| | ||||||||||||||| ||  ||||| |||||||||| ||  ||||||||||| |||||    
T  37419806 gacacgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgt 37419730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 13204098 - 13204035
Alignment:
Q  166 tgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| |||| |||||||||| |||||||||| ||| | | ||||||| ||||||||||||||||    
T  13204098 tgtcctgtccgacacgacactgacacatatagttatattaaattatgtaattttctcaaattat 13204035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 18571031 - 18570980
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||||||||| |||||| |||||||||  |||||||||||||||||    
T  18571031 cgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 21091781 - 21091710
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||| | ||||||||||||| ||||  ||||||| ||||||||||| ||||||| |||| |||||    
T  21091781 gacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgt 21091710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 25080946 - 25080887
Alignment:
Q  193 tataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||| |||||  || || ||||||||||||| ||| ||||||||||||||    
T  25080946 tataattacactgacttatgtgatcttatcaaattattagcggtgccggcgtgttagtgt 25080887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 28412395 - 28412332
Alignment:
Q  194 ataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||||  ||||| ||||||||||| | |||| | ||||||||||| ||||    
T  28412395 ataattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtg 28412332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 17124240 - 17124198
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||||||| ||||||||||||||| ||||||| |||||||||    
T  17124240 cgacaccgatacatataattacacttaattatgtaattttctc 17124198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 29176495 - 29176565
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| |||| ||||||||||||||||||||  |  || ||||||||||| ||||||| |||||| |||||    
T  29176495 acaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgt 29176565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 33153487 - 33153417
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||| | ||||||||||||||||||  ||||| | |||| ||||| ||| |||||||||    
T  33153487 gacacgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgt 33153417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 40361755 - 40361805
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||| ||||||||||||| ||||||| |||||| |||||||||||    
T  40361755 gacaccaacagatataattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 2415374 - 2415325
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| ||||||||| ||||||| ||||||  ||||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatta 2415325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 229
Target Start/End: Original strand, 27447014 - 27447063
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||| |||||| |||||||||||||||||||  || ||||||||||||    
T  27447014 cgacactgacacaaataattacactgaattatgggatcttctcaaattat 27447063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 34006993 - 34007042
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||| ||| ||||||||||||||||  | |||||||||||||||    
T  34006993 acaccgacacctatgattacactgaattatgtcaatttctcaaattatta 34007042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 35447883 - 35447960
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||||||  |||| |||| ||| ||||||||||| ||||||||  ||||||||||  |||| |||||| ||||||    
T  35447883 gacacgacacaaacacttatagttatactgaattatgtaattttctttaattattagcgatgtcagcgtgtaagtgtt 35447960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 44776669 - 44776608
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatt 230  Q
    |||||| ||||||||||||||| |||| |||||||||| |||||  ||||||  ||||||||    
T  44776669 cgtgtccgacacgacaccgacatatatgattacactgagttatgtcattttcataaattatt 44776608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 232
Target Start/End: Complemental strand, 4207919 - 4207864
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||| ||||||| ||||||||||||| ||||||||  |||| ||||||||||||    
T  4207919 gacacgataccgaca-atataattacactaaattatgcgcttttttcaaattattag 4207864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 257
Target Start/End: Original strand, 16069263 - 16069331
Alignment:
Q  189 cacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||||||||||||||||   ||||| | ||||||||| | |||||||||||| ||||| ||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtg 16069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 22084824 - 22084883
Alignment:
Q  174 ctgacacgacaccgacacatataa--ttacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||| |||| |||||||||  ||||||||||||||   |||||||||||||||||    
T  22084824 ctgacacgataccggcacatataaaattacactgaattatatgattttctcaaattatta 22084883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 212
Target Start/End: Complemental strand, 28596579 - 28596496
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg 212  Q
    ||||| |||||||||||||||  |||||  ||||  |||| ||||||||||     |||||||||||| |||||||||||||| |||||    
T  28596579 acggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtc-----cgacaccgacacttataattacactgacttatg 28596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 232
Target Start/End: Complemental strand, 30471093 - 30471045
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||||||||||  ||||||||  ||||||||||| ||||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaatattag 30471045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 32749821 - 32749869
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaa 224  Q
    |||||||||| ||||| ||| ||||||||||||||||  ||||||||||    
T  32749821 gacacgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 37497178 - 37497106
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    |||||||||| |||| |||||| |||||| ||  ||||||||||||||||| | ||||||  |||| ||||||    
T  37497178 gacaccgacagatattattacattgaattgtggcattttctcaaattattatcagtgtcgatgtgtcagtgtt 37497106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 41942152 - 41942092
Alignment:
Q  192 atataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| ||||||||||| |||||||||||||| ||| | ||| | |||||| |||||    
T  41942152 atataattatactgaattatgtaattttctcaaatttttaacggtgactgcgtgtcagtgt 41942092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 45000845 - 45000893
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaatt 227  Q
    ||||||||||||||||| |||||| |||||| ||  |||||||||||||    
T  45000845 acgacaccgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 16641924 - 16642033
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||  |||||| ||||||||||  ||||||||| ||||||||||||||||||||||  ||||| |||||||    |||||||||||||    
T  16641924 actcctcggattaggtgtgtcccggtgttagacacatgtcgtgtccgacacgacaccgacacatataacgacactaaattatgtgtatttctcaaattat 16642023  T
Q  230 tagctgtgtc 239  Q
    ||| ||||||    
T  16642024 tagttgtgtc 16642033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 13844596 - 13844662
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 249
Target Start/End: Original strand, 11927083 - 11927155
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttag 249  Q
    ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| | |||||||||| ||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattag 11927155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 177 - 249
Target Start/End: Complemental strand, 11944727 - 11944655
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttag 249  Q
    |||||||||||||||||||||||||||||| |||||  ||||| ||||||||||| | |||||||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttag 11944655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 252
Target Start/End: Original strand, 15816126 - 15816201
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| |||||||||||| |||||||  ||||| |||||||||||| ||||||||||||| |||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 15816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 31236580 - 31236643
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 7658520 - 7658458
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgt 244  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 24362198 - 24362268
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||  ||||||||||||||||||||||||||  ||| ||||||||||||||| ||||||||||||    
T  24362198 gacacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgt 24362268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 34897144 - 34897078
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||| |||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgt 34897078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 3025661 - 3025557
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||| | |||| | |||| ||||| ||||||||||     |||||| ||||| ||||||||||||||||||||  |||||||||    
T  3025661 acggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtc-----cgacactgacacctataattacactgaattatgtgattttctca 3025567  T
Q  224 aattattagc 233  Q
    ||||||||||    
T  3025566 aattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 22652039 - 22651958
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||| | |||||| | |||||||||  ||||| |||||||||||||||||||||||||| ||||| ||||    
T  22652039 gacacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 22651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 4786338 - 4786410
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||||   |||||||||||| |||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgt 4786410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 39954277 - 39954345
Alignment:
Q  178 cacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| ||||| |||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||    
T  39954277 cacggcaccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgt 39954345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 4611590 - 4611532
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 25566903 - 25566841
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||| | ||||||||||||||||||  ||||| |||||||||||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 926737 - 926865
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||| | ||||||||| ||||  |||| |||||| |||     |||||||||||| |||||||||||||||  |||  |||||||||    
T  926737 acggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtc-----cgacaccgacacttataattacactgaacaatgagattttctca 926831  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||  |||| ||||||| ||||| ||||    
T  926832 aattattaggagtgttggcgtgtcagtgtccgtg 926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 22596053 - 22595980
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgtt 253  Q
    ||||||| |||| | ||||||||||||||||||  ||||| | |||||||||||||||||||||||| ||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgtt 22595980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 25192350 - 25192419
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| |||||||| |||||||||||  | ||| |||||||||||||||||||||||||| |||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgt 25192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 27213601 - 27213540
Alignment:
Q  185 ccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||||||| ||||||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgt 27213540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 29510300 - 29510381
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| |||||||||| | |||||| |||||||| ||  ||||| |||||||||||||||||||||||||| ||||| ||||    
T  29510300 gacactacaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 29510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 13436960 - 13437036
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| | | |||||  |||||||||  ||||| |||||||||||||||||||||||||| |||||    
T  13436960 gacacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 13437036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Complemental strand, 24669492 - 24669420
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| | |||||||||||||||||| ||||| |||||||||||| | ||||| |||||| |||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgt 24669420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 25172693 - 25172757
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||||||||||| | || |||| |||||| ||||||||||||| |||||    
T  25172693 tgacacgacaccgacacatataattacattaaaatatgtaattttatcaaattattagcagtgtc 25172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 221
Target Start/End: Original strand, 26902113 - 26902216
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||||||| ||| |||| ||||||||||  ||||| |||||||||| |||||      ||||||||||||||||||||||||||||||||  |||    
T  26902113 acggacactcctcagataaggcgtgtccccgtgccagacacgtgtcgtgtccgacactcatacgacaccgacacatataattacactgaattatgtgatt 26902212  T
Q  218 ttct 221  Q
    ||||    
T  26902213 ttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 12606830 - 12606889
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||||| ||||||    
T  12606830 gacaccgacacatataattacattgaattatatgattttctcaaattattagcagtgtcg 12606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 14134757 - 14134706
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  14134757 gacaccgacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 33405333 - 33405435
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||| | ||||||| | |||||  |||| ||||||||||||||||     ||||||||||||||||||||||||| |||||||   ||||||||    
T  33405333 acggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtc-----cgacaccgacacatataattacactaaattatgtgtttttctca 33405427  T
Q  224 aattatta 231  Q
    ||||||||    
T  33405428 aattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 36450709 - 36450831
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||||||||| |||||  ||||  |||| | ||||||||     ||||||| |||| | ||||||||||||||| ||  ||||| |||||||||    
T  36450709 actcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtc-----cgacacctacacttgtaattacactgaattctgtgattttttcaaattat 36450803  T
Q  230 tagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||| ||||||||||||| ||||| ||||    
T  36450804 tagttgtgtcggcgtgtcagtgtccgtg 36450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 40332301 - 40332191
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||||||||||||  ||||| ||||  |||| ||||||||||     | |||||||||| | ||||||||||||||||||  |||||||||    
T  40332301 acggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtc-----ccacaccgacacttgtaattacactgaattatgtgattttctca 40332207  T
Q  224 aattattagctgtgtc 239  Q
    ||||||| || |||||    
T  40332206 aattatttgcagtgtc 40332191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 246
Target Start/End: Original strand, 2572052 - 2572122
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||| | |||||||||| |||||||  ||||| |||||||||||| ||||||| |||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgt 2572122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 137 - 251
Target Start/End: Complemental strand, 31557093 - 31556985
Alignment:
Q  137 ggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgt 236  Q
    ||||||||| |||||  ||||  |||||||||||||||||||||     ||| || | ||||||||||||||||||  ||||| ||||||||||| ||||    
T  31557093 ggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacac-----cgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgt 31557000  T
Q  237 gtcggcgtgttagtg 251  Q
    |||||||||| ||||    
T  31556999 gtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 36934730 - 36934652
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||| || ||||||||||||||| |||||||||  ||||| || |||||||||| |||||| ||||||||||| ||||    
T  36934730 acgacgccaacacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtg 36934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 44067569 - 44067503
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||| ||||||||||||| ||||||  ||||||||||||||||| | |||||||||||| |||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 44067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 250
Target Start/End: Original strand, 4298887 - 4298956
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagt 250  Q
    ||||||||||| | |||||||| | |||||||  ||||| ||||||||||| ||||||||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagt 4298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 14634137 - 14634206
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtg 245  Q
    ||||||||||| ||| ||||||||||||||||||||  |||||||| ||||| ||||| |||||| ||||    
T  14634137 gacacgacaccaacaaatataattacactgaattatataattttcttaaattgttagcggtgtcgacgtg 14634206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 20873128 - 20873051
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||||| |||||||  ||||| ||||||||||| || ||||||||||| ||||| ||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtg 20873051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 180 - 257
Target Start/End: Complemental strand, 24613579 - 24613503
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||| | |||||||||| |||||||  ||||| ||||||||||||||||||||| |||| |||| |||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagtgctcgtg 24613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 29447048 - 29447176
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||| ||||||||| |||||  |||| |||||  ||||||||| |||||      ||||||||||| | || ||||| |||||||||  |||    
T  29447048 acggacactcctaggattaggcgtgtcctggtgtcagacacatgtcgtgtccgacaccgacatgacaccgacacttgtagttacattgaattatgtgatt 29447147  T
Q  218 ttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||| ||||||| |||||    
T  29447148 ttctcaaattattagttgtgtcgacgtgt 29447176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 30271286 - 30271363
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||| | ||| | ||||||||||| ||||||  ||||| |||||| ||||||||||||||||||| |||||    
T  30271286 tgacacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgt 30271363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 170 - 231
Target Start/End: Original strand, 33382009 - 33382070
Alignment:
Q  170 gtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||| ||||||||||||||||||||| ||||||||||  ||||||| |||||||||    
T  33382009 gtgtctaacatgacaccgacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 257
Target Start/End: Complemental strand, 11803321 - 11803241
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||| |||||||||||||||||||||||||  ||||||| ||||||||| | ||||| | || | ||||||||||    
T  11803321 acacaacaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtg 11803241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 13203688 - 13203648
Alignment:
Q  192 atataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 8343431 - 8343309
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacg------acaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||| ||||||||||| |||||| ||||  |||| |||||||||| ||||||      |||| ||||| | |||||||||| |||||||  ||||| |||    
T  8343431 actcttcggattaggcgtgtcccggtgtcggacacgtgtcgtgtcggacacgtgtacgacactgacacttgtaattacactaaattatgtgattttttca 8343332  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    ||||||||||| |||||| ||||    
T  8343331 aattattagctatgtcggtgtgt 8343309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 14731763 - 14731712
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||| |||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 20679396 - 20679447
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    ||||||||||| ||||||||||||||| ||||  ||||||||||||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 252
Target Start/End: Original strand, 22197743 - 22197814
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| ||||| | |||||||||| |||||||  | ||| |||||||||||||||||| |||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgt 22197814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 28384988 - 28385055
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    |||||| ||||||||||||||||||||||||||||||||  ||||  ||| ||||||| | |||||||    
T  28384988 ctgacatgacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcgg 28385055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 5813702 - 5813585
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||  ||||||| |||||| ||||  |||| ||||||||||     |||||||||||| | || ||||||| || ||||  | ||| |||    
T  5813702 acggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtatttacactaaaatatgtgactttttca 5813608  T
Q  224 aattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||    
T  5813607 aattattagctgtgtcggcgtgt 5813585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 7442902 - 7442832
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||| |||| | |||||||||||||||||| |||||| | ||||||||||| |||| ||| |||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgt 7442832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 8343032 - 8342970
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcgg 241  Q
    ||||||||||||| | |||||||||| |||||||  ||||| |||||||||||||| ||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 3951485 - 3951561
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactg 205  Q
    ||||| |||||| ||||||||| ||| ||||||| ||||| |||||||||||     ||||||||||||||||| |||||||    
T  3951485 acggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtct-----gacaccgacacatataagtacactg 3951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 18170482 - 18170559
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||  | |||||||| ||||||||| |||||| ||||||| |||  ||||||||||||| ||||| ||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtg 18170559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 18634050 - 18634127
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||  | |||||||| ||||||||| |||||| ||||||| |||  ||||||||||||| ||||| ||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtg 18634127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 24858120 - 24858002
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaa---ttttctcaaat 226  Q
    ||||||| |||||||| |||||| | ||  ||||  ||||||||| ||||||||| |||||| | || |||||||||||||||  |   |||| ||||||    
T  24858120 actcctctgattaggcgtgtcccggcgtgggacacatgtcgtgtccgacacgacaacgacacttgta-ttacactgaattatgtgatttttttttcaaat 24858022  T
Q  227 tattagctgtgtcggcgtgt 246  Q
    ||||| ||||||||||||||    
T  24858021 tattaactgtgtcggcgtgt 24858002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 257
Target Start/End: Original strand, 31109518 - 31109595
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| |||||||||| ||| |||||||| |   ||||||||||||||||| | |||||||||||| ||||| ||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 4122244 - 4122300
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||| ||||||||||||||||||||| ||||||||  |||||| || ||||||||    
T  4122244 tgacacaacaccgacacatataattacaatgaattatataattttatctaattatta 4122300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 4948711 - 4948659
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattag 232  Q
    |||||||||||| | ||||||||||||||||||  ||||| ||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 212
Target Start/End: Complemental strand, 8847315 - 8847283
Alignment:
Q  180 cgacaccgacacatataattacactgaattatg 212  Q
    |||||||||||||||||||||||||||||||||    
T  8847315 cgacaccgacacatataattacactgaattatg 8847283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 26714120 - 26714168
Alignment:
Q  216 ttttctcaaattattagctgtgtcggcgtgttagtgttcgtgcttcata 264  Q
    |||||||| ||||||||| |||||||||||||||||| | |||||||||    
T  26714120 ttttctcacattattagcggtgtcggcgtgttagtgtccatgcttcata 26714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 34223017 - 34222953
Alignment:
Q  169 cgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||| ||||| | ||||||||||||||||||||| |||||||  ||||| | |||||||||||    
T  34223017 cgtgtccgacaccataccgacacatataattacacttaattatgtgattttattaaattattagc 34222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 12985451 - 12985400
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||| |||| |||||| |||||||||  |||||||||||||||||    
T  12985451 cgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 34451033 - 34451096
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||||||||||||| ||| ||  ||||||  |||  ||||||||||||    
T  34451033 gacacgacaccgacacatataattacactgcattttgtgattttcaaaaaaaattagctgtgtc 34451096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 242
Target Start/End: Complemental strand, 18407829 - 18407716
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||  ||||||| |||||  ||||  |||||||||||||||     || || |||||| | ||||||||||||||||||  ||||| |      
T  18407829 acggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtc-----cggcagcgacacttgtaattacactgaattatgtgatttttttg 18407735  T
Q  224 aattattagctgtgtcggc 242  Q
    |||||||||||||||||||    
T  18407734 aattattagctgtgtcggc 18407716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 239
Target Start/End: Complemental strand, 21465533 - 21465412
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtc------tgacacgacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||  ||||||| | |||| ||||| |||| ||||||||||      |||||||||||| |||| | ||||||||  |||||||   |||    
T  21465533 acggacactcctcaaattaggcgtatccctgtgttggacacgtgtcgtgtccgacactgacacgacaccaacacttgtaattacatcgaattatatgatt 21465434  T
Q  218 ttctcaaattattagctgtgtc 239  Q
    || |||||||||||||||||||    
T  21465433 ttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 27101573 - 27101508
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| ||||| ||||||| |||| |||||||  ||||| ||||||||||||| ||||||||||||    
T  27101573 cgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 27101508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 240
Target Start/End: Complemental strand, 29776085 - 29776035
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||||||||| ||||||||| |  ||||||||||||||||||| ||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcg 29776035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 30077387 - 30077453
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| ||||| | ||||||||||||||||||  || || ||||||||||||||| || |||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgt 30077453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 3066107 - 3066042
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||| |||||||||| | |||||| | |||||  | ||||||||||||||||| |||||||    
T  3066107 ctgacacgataccgacacatgttattacattcaattaatccattttctcaaattattacctgtgtc 3066042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 4673440 - 4673497
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||| |   ||||| ||||||||||| |||||||||||||| |||||    
T  4673440 taattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgt 4673497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 8293883 - 8293854
Alignment:
Q  181 gacaccgacacatataattacactgaatta 210  Q
    ||||||||||||||||||||||||||||||    
T  8293883 gacaccgacacatataattacactgaatta 8293854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 12570514 - 12570567
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||||||||||||||| |||||||   |||||| ||||||||||| |||||    
T  12570514 cgacacatataattacacttaattatgtgtttttcttaaattattagcagtgtc 12570567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 12570736 - 12570793
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||| ||| ||||||||||||| ||||||||  |||||| ||||||||||| |||||    
T  12570736 acaccaacatatataattacacttaattatgcgtttttcttaaattattagcggtgtc 12570793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 14639742 - 14639787
Alignment:
Q  127 gatactcctcggattaggcatgtccccgtgttagacatgtgtcgtg 172  Q
    ||||||||| |||||||||||||||| ||||  |||||||||||||    
T  14639742 gatactccttggattaggcatgtcccggtgtcggacatgtgtcgtg 14639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 34201056 - 34201097
Alignment:
Q  190 acatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||| |||||||||  |||||||||||||||||    
T  34201056 acatataattacattgaattatgtcattttctcaaattatta 34201097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 205
Target Start/End: Original strand, 43737760 - 43737836
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactg 205  Q
    ||||| |||||| |||| |||| | ||||||||| |||||  |||||||||     ||||||||||||||||||||||||||    
T  43737760 acggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtc-----cgacaccgacacatataattacactg 43737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 3508108 - 3508060
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| |||||||| |||||| |||||||||  |||||||||||||||||    
T  3508108 caccaacacatatgattacattgaattatgttattttctcaaattatta 3508060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 8798838 - 8798882
Alignment:
Q  187 gacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||||||||||||| | |||||||||  |||||||||||||||||    
T  8798838 gacacatataattatattgaattatgttattttctcaaattatta 8798882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 12559107 - 12559159
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||| | |||||| |||||||||||||||   |||||||||||||||||||    
T  12559107 gacaccaatacatatgattacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 14692514 - 14692447
Alignment:
Q  184 accgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||| |||| |||||||||||||||  | ||||||||||||||| ||||||| | |||| |||||    
T  14692514 accgacacctatagttacactgaattatgtca-tttctcaaattattatctgtgtcagagtgtcagtgt 14692447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 29447507 - 29447471
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatg 212  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  29447507 gacacgacaccaacacatataattacacttaattatg 29447471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 34450970 - 34451026
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac 180  Q
    ||||| |||||| |||| |||| ||||||||||| ||||| |||||||||| |||||    
T  34450970 acggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacac 34451026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 37283814 - 37283863
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattattagc 233  Q
    |||||||||||||  ||||||||||||||||  ||||||||| |||||||||    
T  37283814 acaccgacacata--attacactgaattatgtgattttctcagattattagc 37283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 242
Target Start/End: Original strand, 41831958 - 41832002
Alignment:
Q  198 ttacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||||    
T  41831958 ttacactgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 13516 - 13382
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||||| ||||||||  |||||  |||| ||||  |||||||||| ||||| ||||||||| | | ||||| ||||||||||||  ||||||||    
T  13516 acggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctc 13417  T
Q  223 aaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| ||||||||||||| ||||| ||||    
T  13416 aaattattagttgtgtcggcgtgtcagtgtccgtg 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 21811 - 21945
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac-gacaccgacacatataattacactgaattatgcaattttctc 222  Q
    ||||| |||||| ||||||||  |||||  |||| ||||  |||||||||| ||||| ||||||||| | | ||||| ||||||||||||  ||||||||    
T  21811 acggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtgattttctc 21910  T
Q  223 aaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| ||||||||||||| ||||| ||||    
T  21911 aaattattagttgtgtcggcgtgtcagtgtccgtg 21945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 252
Target Start/End: Complemental strand, 23496 - 23407
Alignment:
Q  163 atgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||| |  | |||||| |||||||||||||| |||||    
T  23496 atgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgt 23407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 4830 - 4953
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg-caattttctc 222  Q
    ||||| |||||||||||||||| |||||| ||||  ||||||||||||||   ||| |||||| |||| | ||||||||||||||||||  | |||| |     
T  4830 acggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt---acaagacaccaacacttgtaattacactgaattatgtgatttttttt 4926  T
Q  223 aaattattagctgtgtcggcgtgttag 249  Q
    ||||||||||||||||||| |||||||    
T  4927 aaattattagctgtgtcggtgtgttag 4953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 6372 - 6312
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||    
T  6372 acgacaccgacacatataattacattgaattatgcaattttgtcaaattattagcagtgtc 6312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 241715 - 241576
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| ||| |||||||||||| |||||| ||||  |||| |||||||||| |||||      |||||||||||  ||||||||||| |||||||  |||    
T  241715 acggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgatt 241616  T
Q  218 ttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||  ||||||||||||||||||||||||| ||||| ||||    
T  241615 tttccaaattattagctgtgtcggcgtgtcagtgtccgtg 241576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 9685 - 9799
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaatt 217  Q
    ||||| |||||||||||||  | ||||||  ||| ||||| ||||||||||||||||      |||||||||||||||||||||||||||||| |  |||    
T  9685 acggacactcctcggattatacgtgtcccgatgtcagacaagtgtcgtgtctgacaccaacacgacaccgacacatataattacactgaattaagtgatt 9784  T
Q  218 ttctcaaattattag 232  Q
    |||||||||||||||    
T  9785 ttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 20235 - 20165
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||| ||||| | ||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  20235 gacacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 20165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 240
Target Start/End: Complemental strand, 70382 - 70277
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||| |||||||||||||||||  ||||  |||| ||||||||||     |||||||||||| ||||||||||||||||||||  ||||| |||||||||    
T  70382 actcatcggattaggcatgtcctggtgtcggacacgtgtcgtgtc-----cgacaccgacacttataattacactgaattatgttattttttcaaattat 70288  T
Q  230 tagctgtgtcg 240  Q
    || ||||||||    
T  70287 taactgtgtcg 70277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 92851 - 92794
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgt 92794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 44521 - 44584
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtc 239  Q
    ||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||    
T  44521 gacacgataccgacacatataattacactgaattatgtgattttctcaaatttttagcggtgtc 44584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 1098 - 1028
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||| |||| |||||||||| ||||||||||||||| |||||| ||||||||||||| ||||||| ||||    
T  1098 gacaccacactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgt 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 51855 - 51793
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||| ||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 53243 - 53173
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||| ||||||||| ||||||||||||||||||||  |||||||||||||||| || || |||||||||    
T  53243 gacacggcaccgacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgt 53173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 257
Target Start/End: Original strand, 411 - 539
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| |||||||||||||||  |||||| ||||  |||| | ||||||||     |||||||||||| | ||||||||||||||| ||  ||||| |||    
T  411 acggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtc-----cgacaccgacacttgtaattacactgaattttgtgattttttca 505  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||| |||||||||| | ||||| ||||    
T  506 aattattagcagtgtcggcgtatcagtgtccgtg 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 8908 - 8780
Alignment:
Q  124 acggatactcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctca 223  Q
    ||||| ||||||| |||||||| |||| | ||||  |||| ||||||||||     |||||||||||| | |||||||||| ||| ||   ||||| |||    
T  8908 acggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtc-----cgacaccgacacttgtaattacactaaataatatgattttttca 8814  T
Q  224 aattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||||| ||||| ||||    
T  8813 aattattagctgtgtcggcgtgtcagtgtccgtg 8780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 33378 - 33429
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  33378 taattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 186 - 257
Target Start/End: Original strand, 225274 - 225345
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||| |||||||||| || ||||||  ||||||||||||||||| |||||||||||||| ||||| ||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtg 225345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 46741 - 46675
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||  | ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgt 46675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 263368 - 263430
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    |||||||||| ||||| ||||||||||||||||||||   |||||||||||||||||| ||||    
T  263368 gacacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgt 263430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 63831 - 63774
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgt 238  Q
    ||||||||||| | ||||| |||||||||||| |||||||||||||||||||| ||||    
T  63831 gacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgt 63774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 56985 - 56932
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattat 229  Q
    |||||||||| ||||| ||| |||||||||||||||   |||||||||||||||    
T  56985 gacacgacactgacacttatgattacactgaattatatcattttctcaaattat 56932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 99957 - 99892
Alignment:
Q  175 tgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    |||||||||||| ||||||||||||||| |||||||||  ||||||| ||||||||| | ||||||    
T  99957 tgacacgacaccaacacatataattacattgaattatgttattttctaaaattattatcggtgtcg 99892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 90901 - 90851
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    |||| ||||| ||||||||||||||||||||   |||||||||||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 192264 - 192321
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||| |||||||| |||||||||||||||||| | |||||||||||| |||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgt 192321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 178814 - 178896
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgca-attttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||| ||||| ||||| | ||||||||||||||||||   ||||| |||||||||||| ||||||||||||| ||||| ||||    
T  178814 gacatgacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 178896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 14574 - 14523
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||  ||||| |||||||||||| |||||||||||||    
T  14574 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 17750 - 17817
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgtta 248  Q
    ||||||||||| | |||||||||| |||||||  ||||| |||||||||||| |||||| ||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgtta 17817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 240022 - 240072
Alignment:
Q  181 gacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||| |||||| ||||||||   |||||||||||||||||    
T  240022 gacaccgacacatatgattacattgaattatattattttctcaaattatta 240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 25765 - 25819
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||||||||||||| |||||||||||| |||||||  |||||||| ||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 9957 - 9891
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||||||||||||| ||| |   ||||||| |||  |||||||||||||||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 17038 - 17087
Alignment:
Q  182 acaccgacacatataattacactgaattatgcaattttctcaaattatta 231  Q
    ||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  17038 acaccaacacatataattacattgatttatgccattttctcaaattatta 17087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 21106 - 21025
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||| ||||||||||||||||| || || |||||  ||||||||||||||||| | ||||| || ||| ||||| ||||    
T  21106 gacacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtg 21025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 7032 - 7092
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcg 240  Q
    ||||||| |||| | |||||| ||| ||||||| |||||| ||||||||||||||||||||    
T  7032 cgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcg 7092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 256
Target Start/End: Original strand, 8631 - 8711
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgt 256  Q
    |||||||||||||||  | |||||| || ||||||||  || || |||||||||||| ||||||||| ||| |||||||||    
T  8631 gacacgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagtgttcgt 8711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 8729 - 8653
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||||||||| |||||||| |||||| ||||  ||||||  ||||||||||  |||||| ||||| |||||    
T  8729 gacacgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgt 8653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 8068 - 8003
Alignment:
Q  180 cgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||| | ||||||||||| |||||   ||||| |||||||||||| |||||||||||||    
T  8068 cgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 5995 - 6062
Alignment:
Q  179 acgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||||||||||||||||| ||| ||  ||||||| |||  ||||| ||| |||||||||    
T  5995 acgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagatgtatcggcgtgt 6062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 242
Target Start/End: Original strand, 3793 - 3911
Alignment:
Q  130 actcctcggattaggcatgtccccgtgttagacatgtgtcgtgtctgacac------gacaccgacacatataattacactgaattatgcaattttctca 223  Q
    |||||||||||||||| |||| |  |||  ||||||||||||||| |||||      ||||| ||||| | ||||||||||||||||||  ||||| | |    
T  3793 actcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgattttttta 3892  T
Q  224 aattattagctgtgtcggc 242  Q
    |||||||| | ||||||||    
T  3893 aattattaaccgtgtcggc 3911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Complemental strand, 19209 - 19127
Alignment:
Q  174 ctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    |||||||||||||||||  | |||| |||||||||||||  ||||| | ||||||||| |  ||||||||||||||||| ||||    
T  19209 ctgacacgacaccgacatttttaatcacactgaattatgtcatttt-ttaaattattaaccatgtcggcgtgttagtgtccgtg 19127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 45492 - 45562
Alignment:
Q  137 ggattaggcatgtccccgtgttagacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatg 212  Q
    |||||||||||||| | |||| ||||| ||||||||||     |||||||||||| | ||||||||||||||||||    
T  45492 ggattaggcatgtcgcggtgtcagacacgtgtcgtgtc-----cgacaccgacacttgtaattacactgaattatg 45562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 130538 - 130479
Alignment:
Q  183 caccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggc 242  Q
    ||||||||| | ||||||||||||||||||  ||||| ||||| ||||| ||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggc 130479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 3023 - 3062
Alignment:
Q  160 gacatgtgtcgtgtctgacacgacaccgacacatataatta 200  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  3023 gacatgtgtcgtgtc-gacacgacacctacacatataatta 3062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 252
Target Start/End: Complemental strand, 71788 - 71710
Alignment:
Q  176 gacacgacaccgacacatataattacactgaattatgcaattttct--caaattattagctgtgtcggcgtgttagtgt 252  Q
    |||||||||| |||||   ||||||||||||||| ||  ||||| |  ||||||||||||||||||||||||| |||||    
T  71788 gacacgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgt 71710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 1718 - 1637
Alignment:
Q  160 gacatgtgtcgtgtctgacacgacaccgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||||||||||||||     |||||||||||| |||||||| ||  ||||||   ||||||||||||||||| | ||||||||||||    
T  1718 gacatgtgtcgtgtc-----cgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  188 acacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    |||| |||||||||||| |||||||  |||||  ||||||||||| |||||||||||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 19619 - 19563
Alignment:
Q  195 taattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgttagtgt 252  Q
    ||||||||||||||||||  ||||| |||||||||||| ||| ||||||||| |||||    
T  19619 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgt 19563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 23832 - 23771
Alignment:
Q  177 acacgacaccgacacatataattacactgaattatg-caattttctcaaattattagctgtg 237  Q
    ||||||||||||||| | ||||||||||||||||||  | |||| ||||||||||| |||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtg 23771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 10512 - 10548
Alignment:
Q  221 tcaaattattagctgtgtcggcgtgttagtgttcgtg 257  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  10512 tcaaattattagctgtgtcggtgtgttagtgtccgtg 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 26446 - 26386
Alignment:
Q  186 cgacacatataattacactgaattatgcaattttctcaaattattagctgtgtcggcgtgt 246  Q
    ||||||||||||  ||| |||||||||  ||||||||||||||||||  |||||| |||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgt 26386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University