View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21120_low_53 (Length: 349)
Name: NF21120_low_53
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21120_low_53 |
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Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 6 - 324
Target Start/End: Original strand, 21483367 - 21483685
Alignment:
| Q |
6 |
actgataagaattatattgatttccataacctccaaaattcataccatgaggttgtagcacattgttgttattttccacaaatgattgattgtagtttgg |
105 |
Q |
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| T |
21483367 |
actgataagaattatattgatttccataacctccaaaattcataccatgaggttgtagcacattgttgttattttccacaaatgattgattgtagtttgg |
21483466 |
T |
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| Q |
106 |
tgcaacattgaattgagaagcaccccatgaatgatttgattccaacatgtgatattcattagtaacagcaggttggtaagggttaatgttatttgaaaca |
205 |
Q |
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| T |
21483467 |
tgcaacattgaattgagaagcaccccatgaatgatttgattccaacatgtgatattcattagtaacagcaggttggtaagggttaatgttatttgaaaca |
21483566 |
T |
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| Q |
206 |
gaaccatttgtgtaaggatcagcaacaaatccaacgccaactccaaccattggttgtgaaaattgttgtggaggtacaatgagaggtgtttgatctagcc |
305 |
Q |
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| T |
21483567 |
gaaccatttgtgtaaggatcagcaacaaatccaactccaactccaaccattggttgtgaaaattgttgtggaggtacaatgagaggtgtttgatctagcc |
21483666 |
T |
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| Q |
306 |
atgatgtttggttgaaaca |
324 |
Q |
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| T |
21483667 |
atgatgtttggttgaaaca |
21483685 |
T |
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