View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21120_low_83 (Length: 265)
Name: NF21120_low_83
Description: NF21120
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21120_low_83 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 37207710 - 37207946
Alignment:
| Q |
19 |
cataaagctttgttggtaggcaaggttgttatttcctaattataggattaatagtatgatgttgattgagatgtgtaataattaatactattaaccaacc |
118 |
Q |
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| T |
37207710 |
cataaagctttgttggtaggcaaggttgttatttcctaattataggattaatagtatgatgttgattgagatgtgtaataattaatactattaaccaacc |
37207809 |
T |
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| Q |
119 |
cttctaaaaaggactgttagttaattaacaaactttttcttcctttcccttcggatacatacatctatattttgtagctagctgcccctaagatggagac |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37207810 |
cttctaaaaaggactgttagttaattaacaaactttttcttcctttcccttcggatacatacatctatattttgtagctagctgcccctaagatggagac |
37207909 |
T |
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| Q |
219 |
tttttcttcaaacaaacaagctttcgtgtcattcatc |
255 |
Q |
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| T |
37207910 |
tttttcttcaaacaaacaagctttcgtgtcattcatc |
37207946 |
T |
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