View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21123_high_4 (Length: 261)

Name: NF21123_high_4
Description: NF21123
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21123_high_4
NF21123_high_4
[»] chr6 (31 HSPs)
chr6 (80-261)||(21611904-21612085)
chr6 (93-261)||(5659106-5659275)
chr6 (90-227)||(21282816-21282953)
chr6 (91-228)||(5660113-5660249)
chr6 (97-193)||(21612837-21612933)
chr6 (90-166)||(29751123-29751199)
chr6 (91-166)||(29744781-29744856)
chr6 (89-159)||(12260444-12260514)
chr6 (91-177)||(20489413-20489498)
chr6 (92-208)||(20488261-20488377)
chr6 (89-148)||(14403686-14403745)
chr6 (213-261)||(21283863-21283911)
chr6 (91-166)||(959300-959375)
chr6 (89-159)||(3366496-3366566)
chr6 (89-159)||(20745583-20745653)
chr6 (90-152)||(29465754-29465816)
chr6 (89-130)||(21283922-21283963)
chr6 (91-152)||(29467282-29467343)
chr6 (89-157)||(6888781-6888849)
chr6 (90-177)||(28866392-28866479)
chr6 (92-149)||(12586852-12586909)
chr6 (90-159)||(17383734-17383803)
chr6 (84-157)||(19048647-19048720)
chr6 (90-159)||(31739905-31739974)
chr6 (91-159)||(3618781-3618849)
chr6 (136-172)||(6452548-6452584)
chr6 (89-157)||(8938884-8938952)
chr6 (91-159)||(21271486-21271554)
chr6 (91-159)||(21272109-21272177)
chr6 (91-159)||(22498757-22498825)
chr6 (89-157)||(26392837-26392905)
[»] chr4 (48 HSPs)
chr4 (91-261)||(701633-701803)
chr4 (91-261)||(769932-770102)
chr4 (90-261)||(35055332-35055503)
chr4 (89-261)||(757387-757559)
chr4 (91-227)||(35060375-35060511)
chr4 (90-233)||(756486-756629)
chr4 (91-233)||(702566-702708)
chr4 (91-233)||(770865-771007)
chr4 (93-227)||(16039600-16039734)
chr4 (89-182)||(16038273-16038366)
chr4 (89-181)||(33075186-33075276)
chr4 (89-166)||(36220583-36220660)
chr4 (89-166)||(51645955-51646031)
chr4 (91-166)||(11038577-11038652)
chr4 (92-201)||(36219408-36219516)
chr4 (95-166)||(50551397-50551468)
chr4 (89-159)||(40681491-40681561)
chr4 (92-179)||(4890827-4890915)
chr4 (91-179)||(4892081-4892169)
chr4 (213-261)||(16038375-16038423)
chr4 (109-166)||(51399234-51399291)
chr4 (94-166)||(44303985-44304057)
chr4 (91-166)||(14251196-14251271)
chr4 (91-166)||(44304274-44304349)
chr4 (104-166)||(51399508-51399570)
chr4 (104-177)||(14251477-14251550)
chr4 (89-158)||(41845499-41845568)
chr4 (94-158)||(9086290-9086354)
chr4 (87-159)||(56271206-56271278)
chr4 (90-177)||(53594983-53595070)
chr4 (89-143)||(2735607-2735661)
chr4 (89-159)||(20614606-20614676)
chr4 (92-166)||(35016691-35016765)
chr4 (89-159)||(42369499-42369569)
chr4 (90-159)||(1098052-1098121)
chr4 (90-159)||(9091423-9091492)
chr4 (94-158)||(11198919-11198984)
chr4 (90-159)||(17475873-17475942)
chr4 (90-159)||(25618435-25618504)
chr4 (90-159)||(31262214-31262283)
chr4 (90-159)||(41610126-41610195)
chr4 (125-166)||(49905762-49905803)
chr4 (89-157)||(9207770-9207838)
chr4 (91-139)||(11039740-11039788)
chr4 (91-159)||(17475397-17475465)
chr4 (129-177)||(24039288-24039336)
chr4 (91-159)||(31487978-31488046)
chr4 (109-157)||(53694135-53694183)
[»] chr1 (50 HSPs)
chr1 (91-261)||(51597961-51598131)
chr1 (91-260)||(16963315-16963484)
chr1 (91-227)||(51599355-51599491)
chr1 (90-233)||(16962009-16962152)
chr1 (91-166)||(46015840-46015915)
chr1 (92-156)||(50682580-50682644)
chr1 (94-166)||(33333395-33333467)
chr1 (89-166)||(33332175-33332252)
chr1 (89-166)||(46014699-46014776)
chr1 (90-166)||(10719355-10719431)
chr1 (91-166)||(10719616-10719691)
chr1 (89-159)||(36143125-36143195)
chr1 (90-159)||(47113104-47113173)
chr1 (89-152)||(6241251-6241314)
chr1 (91-166)||(35814379-35814454)
chr1 (90-152)||(6242694-6242756)
chr1 (89-159)||(6328320-6328390)
chr1 (89-159)||(6714693-6714763)
chr1 (89-159)||(24381151-24381221)
chr1 (90-159)||(5804692-5804761)
chr1 (89-158)||(7964111-7964180)
chr1 (91-159)||(24326582-24326650)
chr1 (87-159)||(37708188-37708260)
chr1 (90-158)||(49964139-49964207)
chr1 (91-158)||(35368856-35368923)
chr1 (91-142)||(39202965-39203016)
chr1 (89-159)||(3798700-3798770)
chr1 (89-159)||(38980044-38980114)
chr1 (89-159)||(44114508-44114578)
chr1 (90-159)||(3798323-3798392)
chr1 (90-159)||(14244550-14244619)
chr1 (90-159)||(15073917-15073986)
chr1 (89-158)||(16659895-16659964)
chr1 (90-159)||(24370114-24370183)
chr1 (89-158)||(31488023-31488092)
chr1 (93-158)||(31697117-31697182)
chr1 (90-159)||(32193516-32193585)
chr1 (90-159)||(37483053-37483122)
chr1 (89-158)||(37483534-37483603)
chr1 (129-166)||(39277874-39277911)
chr1 (90-159)||(45678711-45678780)
chr1 (90-159)||(46448731-46448800)
chr1 (90-159)||(50227904-50227973)
chr1 (89-158)||(51242968-51243037)
chr1 (91-159)||(24332304-24332372)
chr1 (104-176)||(29021595-29021667)
chr1 (129-177)||(30049953-30050001)
chr1 (91-159)||(38979671-38979739)
chr1 (91-159)||(50138495-50138563)
chr1 (113-157)||(50678316-50678360)
[»] chr8 (40 HSPs)
chr8 (89-261)||(39567061-39567233)
chr8 (90-259)||(39270684-39270853)
chr8 (89-261)||(44632704-44632876)
chr8 (93-227)||(44633696-44633830)
chr8 (93-227)||(39568430-39568564)
chr8 (92-227)||(45378470-45378605)
chr8 (89-166)||(9311019-9311096)
chr8 (89-166)||(9312159-9312236)
chr8 (91-146)||(14816570-14816625)
chr8 (91-146)||(14829115-14829170)
chr8 (96-179)||(22191876-22191958)
chr8 (89-166)||(10134606-10134683)
chr8 (91-142)||(45377427-45377478)
chr8 (85-144)||(13463153-13463212)
chr8 (90-166)||(10134900-10134976)
chr8 (125-177)||(21015213-21015265)
chr8 (89-159)||(9115599-9115669)
chr8 (160-227)||(39269488-39269557)
chr8 (89-159)||(43633121-43633191)
chr8 (88-157)||(3318030-3318099)
chr8 (89-158)||(26060623-26060692)
chr8 (89-128)||(14819391-14819430)
chr8 (89-159)||(11713198-11713268)
chr8 (90-176)||(22594317-22594403)
chr8 (89-151)||(23152271-23152333)
chr8 (89-159)||(31445667-31445737)
chr8 (90-159)||(2221593-2221662)
chr8 (89-158)||(7116470-7116539)
chr8 (90-159)||(22013461-22013530)
chr8 (90-159)||(40449243-40449312)
chr8 (90-159)||(41155004-41155073)
chr8 (90-159)||(45123219-45123288)
chr8 (89-157)||(4325966-4326034)
chr8 (91-159)||(9739775-9739843)
chr8 (90-158)||(26060105-26060173)
chr8 (91-159)||(27786475-27786543)
chr8 (89-157)||(29802158-29802226)
chr8 (89-177)||(36194908-36194996)
chr8 (91-159)||(41154617-41154685)
chr8 (91-159)||(42193779-42193847)
[»] chr7 (40 HSPs)
chr7 (86-261)||(26024882-26025057)
chr7 (89-261)||(21710489-21710661)
chr7 (89-227)||(21709156-21709294)
chr7 (91-233)||(26025782-26025924)
chr7 (93-179)||(10990568-10990654)
chr7 (85-177)||(24485816-24485908)
chr7 (91-166)||(45088235-45088310)
chr7 (93-166)||(45087067-45087140)
chr7 (91-160)||(10986695-10986764)
chr7 (90-159)||(30766674-30766743)
chr7 (91-152)||(40738193-40738254)
chr7 (94-166)||(16962847-16962919)
chr7 (90-166)||(26041506-26041582)
chr7 (93-152)||(19543492-19543551)
chr7 (91-157)||(26041807-26041873)
chr7 (94-152)||(40740046-40740104)
chr7 (89-166)||(45596867-45596945)
chr7 (89-158)||(43704943-43705012)
chr7 (90-159)||(45457094-45457163)
chr7 (94-166)||(472858-472930)
chr7 (89-157)||(8736116-8736184)
chr7 (94-161)||(38030332-38030397)
chr7 (88-159)||(27284239-27284310)
chr7 (89-159)||(3217744-3217814)
chr7 (89-159)||(7776947-7777017)
chr7 (89-143)||(17279449-17279503)
chr7 (93-159)||(25445068-25445134)
chr7 (89-159)||(39143501-39143571)
chr7 (89-159)||(47987325-47987395)
chr7 (104-177)||(24846493-24846566)
chr7 (90-159)||(31852072-31852141)
chr7 (90-159)||(37374447-37374516)
chr7 (84-169)||(40851763-40851848)
chr7 (90-159)||(40852150-40852219)
chr7 (93-158)||(42287313-42287378)
chr7 (90-159)||(45456733-45456802)
chr7 (89-157)||(24733627-24733695)
chr7 (91-159)||(27284599-27284667)
chr7 (93-149)||(42754538-42754594)
chr7 (89-157)||(48095354-48095422)
[»] chr3 (46 HSPs)
chr3 (92-261)||(21817288-21817457)
chr3 (92-227)||(21815909-21816045)
chr3 (89-179)||(14859103-14859193)
chr3 (89-166)||(27688484-27688561)
chr3 (86-166)||(27695558-27695638)
chr3 (89-166)||(39992477-39992554)
chr3 (89-176)||(36982649-36982735)
chr3 (89-176)||(37008088-37008174)
chr3 (89-166)||(20184446-20184523)
chr3 (89-159)||(32304230-32304300)
chr3 (90-166)||(24244756-24244832)
chr3 (91-163)||(43464812-43464884)
chr3 (84-166)||(13301939-13302021)
chr3 (84-166)||(13312595-13312677)
chr3 (92-159)||(39198418-39198485)
chr3 (91-166)||(52857268-52857343)
chr3 (90-160)||(20185802-20185872)
chr3 (104-166)||(26247162-26247224)
chr3 (89-159)||(45940670-45940740)
chr3 (93-166)||(6276060-6276133)
chr3 (91-144)||(17509464-17509517)
chr3 (84-157)||(18024909-18024982)
chr3 (91-144)||(42540163-42540216)
chr3 (89-158)||(49221505-49221574)
chr3 (125-177)||(4953405-4953457)
chr3 (91-159)||(40503722-40503790)
chr3 (90-166)||(46453166-46453242)
chr3 (91-162)||(4953124-4953195)
chr3 (83-158)||(48085230-48085305)
chr3 (89-159)||(12739962-12740032)
chr3 (89-159)||(13355173-13355243)
chr3 (89-159)||(24242446-24242516)
chr3 (89-159)||(24242987-24243057)
chr3 (91-157)||(42213524-42213590)
chr3 (99-177)||(50530625-50530703)
chr3 (90-159)||(44712055-44712124)
chr3 (89-158)||(51676127-51676196)
chr3 (92-144)||(6098400-6098452)
chr3 (89-157)||(12061622-12061690)
chr3 (83-159)||(34819610-34819686)
chr3 (91-159)||(44475643-44475711)
chr3 (109-177)||(45421122-45421190)
chr3 (91-159)||(45940215-45940283)
chr3 (89-157)||(48946175-48946243)
chr3 (129-177)||(49220152-49220200)
chr3 (90-158)||(53228205-53228273)
[»] scaffold0031 (3 HSPs)
scaffold0031 (90-261)||(129307-129478)
scaffold0031 (83-233)||(123416-123566)
scaffold0031 (83-233)||(134292-134442)
[»] chr2 (35 HSPs)
chr2 (90-177)||(36888337-36888424)
chr2 (90-177)||(36889719-36889806)
chr2 (89-165)||(34166841-34166918)
chr2 (89-159)||(7184879-7184949)
chr2 (92-166)||(13809426-13809499)
chr2 (89-147)||(35738361-35738419)
chr2 (89-163)||(13810566-13810638)
chr2 (80-159)||(19297516-19297595)
chr2 (94-159)||(40468049-40468114)
chr2 (89-157)||(20686669-20686737)
chr2 (109-177)||(38978896-38978964)
chr2 (89-159)||(26424814-26424884)
chr2 (84-158)||(28190479-28190553)
chr2 (91-144)||(3603504-3603557)
chr2 (86-152)||(3607036-3607104)
chr2 (90-179)||(5381535-5381624)
chr2 (91-144)||(8028966-8029019)
chr2 (92-144)||(10413995-10414047)
chr2 (93-177)||(16203446-16203530)
chr2 (90-166)||(16581577-16581653)
chr2 (85-157)||(27516153-27516225)
chr2 (89-157)||(38578174-38578242)
chr2 (90-177)||(15044738-15044825)
chr2 (91-166)||(16581338-16581412)
chr2 (82-157)||(28957786-28957861)
chr2 (89-159)||(4602807-4602877)
chr2 (89-159)||(9401118-9401188)
chr2 (104-166)||(16203735-16203797)
chr2 (91-157)||(25945826-25945892)
chr2 (89-159)||(32194819-32194889)
chr2 (90-159)||(11131174-11131243)
chr2 (90-159)||(33200027-33200096)
chr2 (90-159)||(43820318-43820387)
chr2 (89-157)||(7031803-7031871)
chr2 (91-159)||(34618512-34618580)
[»] scaffold0029 (2 HSPs)
scaffold0029 (91-165)||(71813-71887)
scaffold0029 (90-158)||(70668-70736)
[»] scaffold0394 (1 HSPs)
scaffold0394 (89-166)||(14268-14346)
[»] chr5 (38 HSPs)
chr5 (89-166)||(19718873-19718950)
chr5 (109-166)||(35463855-35463912)
chr5 (90-177)||(30112682-30112769)
chr5 (90-176)||(25333161-25333247)
chr5 (88-157)||(4959558-4959627)
chr5 (90-159)||(6793766-6793835)
chr5 (94-159)||(23083570-23083635)
chr5 (91-176)||(30645700-30645785)
chr5 (89-166)||(35463560-35463637)
chr5 (94-166)||(1983541-1983613)
chr5 (91-158)||(14347401-14347468)
chr5 (89-152)||(37966812-37966875)
chr5 (89-176)||(38384866-38384953)
chr5 (83-158)||(42026655-42026730)
chr5 (89-159)||(435552-435622)
chr5 (89-159)||(16670018-16670088)
chr5 (89-159)||(24042669-24042739)
chr5 (91-177)||(30644914-30645000)
chr5 (96-153)||(9378728-9378785)
chr5 (125-158)||(14662662-14662695)
chr5 (90-159)||(17339794-17339863)
chr5 (125-166)||(18508814-18508855)
chr5 (90-159)||(24100690-24100759)
chr5 (89-158)||(28905448-28905517)
chr5 (89-158)||(28941843-28941912)
chr5 (91-143)||(1030821-1030873)
chr5 (89-157)||(5187113-5187181)
chr5 (89-177)||(14233066-14233154)
chr5 (89-157)||(14858567-14858635)
chr5 (90-166)||(17115611-17115687)
chr5 (89-157)||(22803582-22803650)
chr5 (91-159)||(27851033-27851101)
chr5 (91-159)||(29962171-29962239)
chr5 (91-159)||(30012559-30012627)
chr5 (104-192)||(37192429-37192517)
chr5 (89-157)||(37812229-37812297)
chr5 (91-159)||(38312325-38312393)
chr5 (91-143)||(39547777-39547829)
[»] scaffold0220 (2 HSPs)
scaffold0220 (91-177)||(25963-26049)
scaffold0220 (90-166)||(26255-26331)
[»] scaffold0194 (1 HSPs)
scaffold0194 (90-166)||(19229-19304)
[»] scaffold0002 (3 HSPs)
scaffold0002 (104-170)||(428983-429049)
scaffold0002 (89-138)||(429159-429208)
scaffold0002 (91-159)||(283164-283232)
[»] scaffold0006 (1 HSPs)
scaffold0006 (90-159)||(83376-83445)
[»] scaffold0054 (2 HSPs)
scaffold0054 (90-177)||(57530-57617)
scaffold0054 (89-157)||(57020-57088)
[»] scaffold0352 (1 HSPs)
scaffold0352 (90-139)||(11134-11183)
[»] scaffold0005 (1 HSPs)
scaffold0005 (89-158)||(1473-1542)
[»] scaffold0430 (1 HSPs)
scaffold0430 (96-152)||(6233-6289)


Alignment Details
Target: chr6 (Bit Score: 158; Significance: 4e-84; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 80 - 261
Target Start/End: Original strand, 21611904 - 21612085
Alignment:
Q  80 agaatattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||    
T  21611904 agaatattctaggcttaattgctattttcgtcccttaactaattttttggtatcgatttggtcccataattaataaaaaatccgtttgagttctttaaat 21612003  T
Q  180 atgtctctgttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21612004 atgtctctgttacataatttggtcccttcagttaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 21612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 93 - 261
Target Start/End: Original strand, 5659106 - 5659275
Alignment:
Q  93 cttaattgctatttt-cgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtta 191  Q
    ||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5659106 cttaattgctatttttcgtcccttaactaattttttggtatcactttggtcccataattaataaaaagtctgtttgagtcctttaaatatgtctctgtta 5659205  T
Q  192 cataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||| ||||| |||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5659206 cataaattggctccttccgttaattttattaaaaaattgttagaatttgtacaagtcatcaccttcattc 5659275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 90 - 227
Target Start/End: Original strand, 21282816 - 21282953
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  21282816 aggcttaattgctattttcgtcccttaattaatttttttgtatcgctttggtcccataattaataaaaagtctgtttgagtcttttaaatatgtctctgt 21282915  T
Q  190 tacataatttggccccttcaattaattttattaaaaaa 227  Q
    ||||||| |||| ||||||  |||||||||||||||||    
T  21282916 tacataaattggtcccttccgttaattttattaaaaaa 21282953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 91 - 228
Target Start/End: Complemental strand, 5660249 - 5660113
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    |||||||||||||||||||||||| || |||||||||||||||| ||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  5660249 ggcttaattgctattttcgtccctaaactaattttttggtatcgttttggtctcataattaat-aaaagtccgtttgaatcctttaaatatgtctctgtt 5660151  T
Q  191 acataatttggccccttcaattaattttattaaaaaat 228  Q
    |||||| ||||  |||||  ||||||||||||||||||    
T  5660150 acataaattggttccttccgttaattttattaaaaaat 5660113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 21612933 - 21612837
Alignment:
Q  97 attgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgttaca 193  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  21612933 attgttattttcgtcccttaattaattttttggtatcgttttggtcccataattaataaaaagtctgtttgagtcctttaaatatgtctccgttaca 21612837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 29751199 - 29751123
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  29751199 aggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttt 29751123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 29744781 - 29744856
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  29744781 ggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttt 29744856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 12260444 - 12260514
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||||||||||||| ||| ||| ||||||    
T  12260444 taggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaag 12260514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Complemental strand, 20489498 - 20489413
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||||||||||| ||||||||  |  |||||| |||| ||||||||||||||| |||||||||||  |||||||||||||||    
T  20489498 ggcttaattgctattttagtcccttatgtt-ttttttagtattgctttggtcccataagtaataaaaagtatgtttgagtcctttaa 20489413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 208
Target Start/End: Original strand, 20488261 - 20488377
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtta 191  Q
    ||||||||| |||||| ||| ||||| ||  ||||| ||||||||||||| | |||| |||||||||||  |||| |||||||||| |   |||||||||    
T  20488261 gcttaattgttattttagtctcttaagtatatttttagtatcgctttggttctataagtaataaaaagtttgtttcagtcctttaatttcatctctgtta 20488360  T
Q  192 cataatttggccccttc 208  Q
    |||| ||||| ||||||    
T  20488361 catattttggtcccttc 20488377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 14403686 - 14403745
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataa 148  Q
    ||||||||||||||||||| ||||||||  |||||| |||||||| ||||||||||||||    
T  14403686 taggcttaattgctattttagtcccttacctaatttgttggtatcactttggtcccataa 14403745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 21283911 - 21283863
Alignment:
Q  213 aattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  21283911 aattttattaaaaaactgttagggtttatacaagtcatcaccttcattc 21283863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 959375 - 959300
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || || ||||| |||||||||||||||||| |||||||| || |||||    
T  959375 ggcttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtcccataagtaataaaaggttcgttt 959300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 3366496 - 3366566
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| ||||||||| ||| |||||||| ||  ||||||||||||||||||| ||| ||| ||||||    
T  3366496 taggcttaaatgctattttggtctcttaattatttaattggtatcgctttggtcccttaactaaaaaaaag 3366566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 20745583 - 20745653
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||| || |||||||||||||| | ||| ||||||||||||||| |||| ||| ||| ||||||    
T  20745583 taggcttaattactcttttcgtcccttaagttattatttggtatcgctttgatcccttaagtaaaaaaaag 20745653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 29465754 - 29465816
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    |||||||||||||||||||||||||||| |||||  || ||||| |||||| ||| |||||||    
T  29465754 aggcttaattgctattttcgtcccttaactaattaattagtatcactttggccccttaattaa 29465816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 21283963 - 21283922
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggt 130  Q
    |||||||||||| |||||||||||||||| ||||||||||||    
T  21283963 taggcttaattgttattttcgtcccttaactaattttttggt 21283922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 29467343 - 29467282
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    ||||||||||||||||||||||||||| || || ||| |||| ||||||||||  |||||||    
T  29467343 ggcttaattgctattttcgtcccttaactatttatttagtattgctttggtcctttaattaa 29467282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 6888781 - 6888849
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||| || |||||    
T  6888781 taggcttaattactcttttggtcccttaatttattttttggtttcgttttggtcccttaactattaaaa 6888849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 28866479 - 28866392
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||| |||| |||| ||| ||||| || || |||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||    
T  28866479 aggcttaaatgctcttttggtctcttaaatatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 28866392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 12586909 - 12586852
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataat 149  Q
    |||||| |||| |||||||||||||| || || ||||||||| |||||||||| ||||    
T  12586909 gcttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaat 12586852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 17383734 - 17383803
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  17383734 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 17383803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 19048720 - 19048647
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||| || ||| ||||||||| ||| || |||||    
T  19048720 tattttaggcttaattactcttttggtcccttaatttattttttagtttcgttttggtcccttaactattaaaa 19048647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 31739974 - 31739905
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  31739974 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 31739905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 3618781 - 3618849
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  3618781 ggcttaaatgcttttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 3618849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 6452584 - 6452548
Alignment:
Q  136 tttggtcccataattaataaaaagtccgtttgagtcc 172  Q
    |||||||||||||||||||||| || |||||||||||    
T  6452584 tttggtcccataattaataaaacgtacgtttgagtcc 6452548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 8938884 - 8938952
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  8938884 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 8938952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 21271486 - 21271554
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  21271486 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 21271554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 21272177 - 21272109
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  21272177 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 21272109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 22498825 - 22498757
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  22498825 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 22498757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 26392905 - 26392837
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  26392905 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaa 26392837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 261
Target Start/End: Original strand, 701633 - 701803
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  701633 ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccgtt 701732  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||| |||| |||||  || ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  701733 acataaattggtccctttcatcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 701803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 261
Target Start/End: Original strand, 769932 - 770102
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  769932 ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccgtt 770031  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||| |||| |||||  || ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  770032 acataaattggtccctttcatcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 770102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 90 - 261
Target Start/End: Original strand, 35055332 - 35055503
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35055332 aggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaagtccatttgagtcctttaaatatgtctctgt 35055431  T
Q  190 tacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||||| |||| ||| ||  | ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  35055432 tacataaattggtcccctccgtcaattttattaaaaaacttttaggatttgtacaagtcatcaccttcattc 35055503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 261
Target Start/End: Complemental strand, 757559 - 757387
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctg 188  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  757559 taggcttaattgctattttcatcccttaacttattttttggtatcgctttggtcccataattaataaaaagtcagtttgagtcctttaaatatgtctccg 757460  T
Q  189 ttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||||| || |  |||||  | ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  757459 ttacataaattagttccttccgtcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 757387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 35060511 - 35060375
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35060511 ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 35060412  T
Q  191 acataatttggccccttcaattaattttattaaaaaa 227  Q
    |||||| |||| ||||||  |||||||||||||||||    
T  35060411 acataaattggtcccttccgttaattttattaaaaaa 35060375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 756486 - 756629
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||    
T  756486 aggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaagtccgcttaagtcctttaaatatgtctccgt 756585  T
Q  190 tacataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    ||||||| |||| ||||||  ||||||||||||||||| |||||    
T  756586 tacataaattggtcccttccgttaattttattaaaaaaatgtta 756629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 702708 - 702566
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||    
T  702708 ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaagtccgcttaagtcctttaaatatgtctccgtt 702609  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    |||||| |||| ||||||  ||||||||||||||||| |||||    
T  702608 acataaattggtcccttccgttaattttattaaaaaaatgtta 702566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 771007 - 770865
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||    
T  771007 ggcttaattgctattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaagtccgcttaagtcctttaaatatgtctccgtt 770908  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    |||||| |||| ||||||  ||||||||||||||||| |||||    
T  770907 acataaattggtcccttccgttaattttattaaaaaaatgtta 770865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 16039734 - 16039600
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgttac 192  Q
    ||||||||||||||| ||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  16039734 cttaattgctatttttgtcccttaactaattttttggtatcgtttcggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccattac 16039635  T
Q  193 ataatttggccccttcaattaattttattaaaaaa 227  Q
    |||| |||| ||||||  |||||||||||||||||    
T  16039634 ataaattggtcccttccgttaattttattaaaaaa 16039600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 89 - 182
Target Start/End: Original strand, 16038273 - 16038366
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatg 182  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16038273 taggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataattaataaaaaatccatttgagtcctttaaatatg 16038366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 181
Target Start/End: Complemental strand, 33075276 - 33075186
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatat 181  Q
    |||||| |||| |||||||||||||||||||  |||||  || ||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  33075276 taggctcaatttctattttcgtcccttaatt--tttttaagtgtcgctttggtcccataagtaataaaaagtccgtttgagtactttacatat 33075186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 36220660 - 36220583
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||||| ||| ||||||| |||||    
T  36220660 taggcttaattgctattttagtaccttaactaattttttggtatcgttttggtcccataactaaaaaaaagttcgttt 36220583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 51646031 - 51645955
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  51646031 taggcttaattgctattttagtcccttagctaattttttggtatcggtttggtcccataactaa-aaaaagtccgttt 51645955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 11038577 - 11038652
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||| ||||||||  |||||||||||||| ||||||||||||||| ||| |||||||| ||||    
T  11038577 ggcttaattgctattttagtcccttagctaattttttggtattgctttggtcccataactaaaaaaaagtctgttt 11038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 36219408 - 36219516
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtta 191  Q
    |||||||||||||||| ||||||||| ||||||||  |||||| ||||||||||||| ||| ||||||||||||| |||  ||||| | | |||| ||||    
T  36219408 gcttaattgctattttagtcccttaactaatttttgagtatcggtttggtcccataactaa-aaaaagtccgttttagtattttaagtttatctccgtta 36219506  T
Q  192 cataatttgg 201  Q
    |||| |||||    
T  36219507 catattttgg 36219516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 50551468 - 50551397
Alignment:
Q  95 taattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||| |||||| |||||||||||||||||||||||||| ||| || |||||| ||| |||||||||||||    
T  50551468 taattgttattttagtcccttaattaattttttggtatcggtttagttccataactaaaaaaaagtccgttt 50551397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 40681561 - 40681491
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||||||||||||| ||| ||| ||||||    
T  40681561 taggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaag 40681491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 4890827 - 4890915
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattt-tttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    |||||||||||||||||||||||||| || ||| ||| |||||||||||  || |||| |||||||| ||  |||||||||||||||||    
T  4890827 gcttaattgctattttcgtcccttaagtagtttctttagtatcgctttgcccctataagtaataaaaggtttgtttgagtcctttaaat 4890915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 4892169 - 4892081
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    |||||||||||||||||| |||||||| |  |||||| ||||||||| |||| ||||| ||||||||  || |||||||||| ||||||    
T  4892169 ggcttaattgctattttcatcccttaagtttttttttagtatcgcttaggtcgcataagtaataaaagatctgtttgagtcccttaaat 4892081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 16038375 - 16038423
Alignment:
Q  213 aattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  16038375 aattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 16038423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 51399234 - 51399291
Alignment:
Q  109 gtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||    
T  51399234 gtcccttaaatatttatttggtatcgctttggtcccataagtaataaaaagtctgttt 51399291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 44303985 - 44304057
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| |||| |||| ||||||||| || || ||| |||||||||||||||||||| |||||||| ||||||||    
T  44303985 ttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtccgttt 44304057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 14251196 - 14251271
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||  ||| |||||||| ||||||||    
T  14251196 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcctctaagtaataaaaggtccgttt 14251271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 44304349 - 44304274
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| ||||  ||| ||||||||| || || ||||||||||||||||| |||||| |||||||| ||||||||    
T  44304349 ggcttaaatgctccttttgtcccttaagtatttatttggtatcgctttggtgccataagtaataaaaggtccgttt 44304274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 51399570 - 51399508
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| ||||||||| || || |||||||||||||||||||| ||| |||||||| ||||||||    
T  51399570 ttttggtcccttaagtatttatttggtatcgctttggtcccttaagtaataaaaggtccgttt 51399508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 14251550 - 14251477
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||| ||||||||| || || ||| |||||||||||||||||||| |||||||| |||||| |  |||||||||    
T  14251550 ttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtccgtattggtcctttaa 14251477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 41845499 - 41845568
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| |||||  ||||||||||||||||||| ||| ||| |||||    
T  41845499 taggcttaaatgctcttttggtcccttaactaattaattggtatcgctttggtcccttaactaaaaaaaa 41845568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 9086290 - 9086354
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||||| || |||||||||||||| | ||| |||||||||||||||||||| ||| ||| |||||    
T  9086290 ttaatttctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaa 9086354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 56271278 - 56271206
Alignment:
Q  87 tctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  56271278 tctaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 56271206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 53594983 - 53595070
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||| ||| ||||| |||| |||| || || |||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||    
T  53594983 aggcttaaatgccattttggtcctttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 53595070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 2735661 - 2735607
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcc 143  Q
    ||||||||| |||| |||| ||||||||| || || |||||||||||||||||||    
T  2735661 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcc 2735607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 20614676 - 20614606
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  20614676 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 20614606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 35016691 - 35016765
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||| ||||| ||| ||||||||| || ||  || |||||||||||  ||||||| |||||||||||||||||    
T  35016691 gcttaaatgctactttggtcccttaagtatttacttagtatcgctttgaccccataagtaataaaaagtccgttt 35016765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 42369569 - 42369499
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  42369569 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 42369499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 1098052 - 1098121
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  1098052 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 1098121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 9091423 - 9091492
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || || ||||| |||||||||||||| ||| ||| ||||||    
T  9091423 aggcttaaatgctcttttggtcccttaagtatttatttggaatcgctttggtcccttaactaaaaaaaag 9091492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 11198919 - 11198984
Alignment:
Q  94 ttaattgctattttcgtcccttaa-ttaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||| |||||||||| ||||| ||  |||||| ||||| |||||||||||||| |||||||||    
T  11198919 ttaattgatattttcgtcacttaagttttttttttagtatcactttggtcccataagtaataaaaa 11198984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 17475942 - 17475873
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  17475942 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 17475873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 25618435 - 25618504
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  25618435 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 25618504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 31262283 - 31262214
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| |||||||||||| ||  |||||| |||||||||||| ||| ||| ||||||    
T  31262283 aggcttaaatgctcttttggtcccttaattatttaattggtaccgctttggtcccttaactaaaaaaaag 31262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 41610126 - 41610195
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  41610126 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 41610195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 166
Target Start/End: Original strand, 49905762 - 49905803
Alignment:
Q  125 tttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||||||||| ||||| |||||||| ||||||||    
T  49905762 tttggtatcgctttggtctcataagtaataaaaggtccgttt 49905803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 9207838 - 9207770
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||| ||| | |||||||||| ||||||||||||| ||| || |||||    
T  9207838 taggcttaattactcttttggtcccctaacttattttttggtttcgctttggtcccttaactattaaaa 9207770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 11039788 - 11039740
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttg 139  Q
    ||||||||||||||||| |||  |||| ||||||||||||||| |||||    
T  11039788 ggcttaattgctattttagtcatttaactaattttttggtatcactttg 11039740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 17475397 - 17475465
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  17475397 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 17475465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 24039288 - 24039336
Alignment:
Q  129 gtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||| ||||||||||||| ||||||||||| |||||  |||||||||    
T  24039288 gtatcggtttggtcccataagtaataaaaagttcgtttaggtcctttaa 24039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 31487978 - 31488046
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  31487978 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 31488046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 53694183 - 53694135
Alignment:
Q  109 gtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||||||||||| ||| ||| ||||||||| | ||||||||||    
T  53694183 gtcccttaattaatttttaggtttcgttttggtcccttgattaataaaa 53694135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 5e-68; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 91 - 261
Target Start/End: Original strand, 51597961 - 51598131
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51597961 ggcttaattgctattttcgtcccttaacttattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccgtt 51598060  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||| |||| ||||||  | ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  51598061 acataaattggtcccttccgtcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 51598131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 91 - 260
Target Start/End: Complemental strand, 16963484 - 16963315
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    |||||||||| ||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||    
T  16963484 ggcttaattgttattttcgttccttaactaattttttggtatcgatttggtctcataattaataaaaagttcatttgagtcctttaaatatgtctccgtt 16963385  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcatt 260  Q
    ||||||  ||| ||||||  | ||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  16963384 acataaactggtcccttccgtcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcatt 16963315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 91 - 227
Target Start/End: Complemental strand, 51599491 - 51599355
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  |||    
T  51599491 ggcttaattgctattttcgtcccttaactaattttttggtatcgctttgatcctataattaataaaaagtccgtttgagttctttaaatatgtcttcgtt 51599392  T
Q  191 acataatttggccccttcaattaattttattaaaaaa 227  Q
    |||||| |||| ||||||  |||||||||||||||||    
T  51599391 acataaattggtcccttccgttaattttattaaaaaa 51599355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 16962009 - 16962152
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||    
T  16962009 aggcttaattgctatttttgtcccttaactaattttttggtattgctttggtcctataattaataaaaagtctgtttgagtcctttaaatatgtcttcgt 16962108  T
Q  190 tacataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    ||||||| |||| ||||||  ||||||||||||||||| |||||    
T  16962109 tacataaattggtcccttccgttaattttattaaaaaaatgtta 16962152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 46015915 - 46015840
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46015915 ggcttaattgttattttagtcccttaagtaattttttggtatcgctttggtcccataactaaaaaaaagtccgttt 46015840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 156
Target Start/End: Complemental strand, 50682644 - 50682580
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaa 156  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  50682644 gcttaattgctattttggtcccttaattatttttttggtatcgctttggtcccataaataataaa 50682580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 33333467 - 33333395
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||||| ||||||||| |||||||||||||||  ||||||||||||||||| |||| ||||||||    
T  33333467 ttaattgctattttagtcccttaactaattttttggtatcagtttggtcccataattaaaaaaatgtccgttt 33333395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 33332175 - 33332252
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| ||| ||||| || || |||||||||| ||||||||||||| ||| |||| ||||||||    
T  33332175 taggcttaattgctattttagtctcttaactagttgtttggtatcggtttggtcccataactaaaaaaatgtccgttt 33332252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 46014699 - 46014776
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| |||  |||| ||||||||||||||||||| | |||||||| ||| |||||||| ||||    
T  46014699 taggcttaattgctattttagtcatttaactaattttttggtatcgcttcgatcccataactaaaaaaaagtctgttt 46014776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 10719355 - 10719431
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||| |||| ||||||||| || || ||| |||||||||||||||||||| |||||||| ||||||||    
T  10719355 aggcttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtcccataaataataaaaggtccgttt 10719431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 10719691 - 10719616
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || || ||||||||||||||||| |||||| |||||||| ||||||||    
T  10719691 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggttccataagtaataaaaggtccgttt 10719616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 36143195 - 36143125
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||| ||||||||| ||| ||| ||||||    
T  36143195 taggcttaattgctcttttcgtcccttaagttattatttggtatcgatttggtcccttaagtaaaaaaaag 36143125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 47113173 - 47113104
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||||| |||||||||||||| | ||| ||||||||||||||| |||| ||| ||| ||||||    
T  47113173 aggcttaattgctcttttcgtcccttaagttattatttggtatcgctttgatcccttaagtaaaaaaaag 47113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 6241251 - 6241314
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    ||||||||||| |||||||||| |||||| || || ||| |||||||||||||||| |||||||    
T  6241251 taggcttaatttctattttcgttccttaactatttatttagtatcgctttggtcccttaattaa 6241314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 35814454 - 35814379
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| |||||||| ||||||||    
T  35814454 ggcttaaatgctcttttggtcccttaagtatttacttggtatcgctttggtcccttaagtaataaaaggtccgttt 35814379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 152
Target Start/End: Complemental strand, 6242756 - 6242694
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    ||||||||||| ||||||| |||||||| |||||  || |||||||||||||||| |||||||    
T  6242756 aggcttaattgatattttcatcccttaactaattaattagtatcgctttggtcccttaattaa 6242694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 6328390 - 6328320
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  6328390 taggcttaattgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaag 6328320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 6714763 - 6714693
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  6714763 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 6714693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 24381221 - 24381151
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| |||||||||||| ||  ||||||||||||||||||| ||| ||| ||||||    
T  24381221 taggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaactaaaaaaaag 24381151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 5804692 - 5804761
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||    
T  5804692 aggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaag 5804761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 7964111 - 7964180
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  7964111 taggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaa 7964180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 24326582 - 24326650
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||    
T  24326582 ggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaag 24326650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 37708188 - 37708260
Alignment:
Q  87 tctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||| |||| |||| || ||||||||| ||  ||||||||||||||||||| ||| ||| ||||||    
T  37708188 tctaggcttaaatgctcttttggttccttaattatttaattggtatcgctttggtcccttaactaaaaaaaag 37708260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 49964207 - 49964139
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||||||| ||||| |||||||| | ||| ||||||||| |||||||||| ||| ||| |||||    
T  49964207 aggcttaattgctcttttcatcccttaagttattatttggtatcactttggtcccttaagtaaaaaaaa 49964139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 35368856 - 35368923
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| |||||    
T  35368856 ggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaattaaaaaaaa 35368923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 39203016 - 39202965
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtc 142  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||| |||||||    
T  39203016 ggcttaattgttattttagtcctttaattaatttgttggtatcgatttggtc 39202965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 3798770 - 3798700
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  3798770 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 3798700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 38980114 - 38980044
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  38980114 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 38980044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 44114578 - 44114508
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  44114578 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 44114508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 3798323 - 3798392
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  3798323 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 3798392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 14244619 - 14244550
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  14244619 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 14244550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 15073986 - 15073917
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| ||||||||| || |||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  15073986 aggcttaaatgctattttggttccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 15073917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 16659964 - 16659895
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| || | |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  16659964 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaa 16659895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 24370114 - 24370183
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  24370114 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 24370183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 31488023 - 31488092
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  31488023 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaa 31488092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 31697117 - 31697182
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  31697117 cttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcccttaactaaaaaaaa 31697182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 32193516 - 32193585
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| ||||  |||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  32193516 aggcttaaatgctcttttaatcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 32193585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 37483053 - 37483122
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  37483053 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 37483122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 37483603 - 37483534
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  37483603 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaa 37483534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 166
Target Start/End: Complemental strand, 39277911 - 39277874
Alignment:
Q  129 gtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  39277911 gtatcggtttggtcccataagtaataaaaagtccgttt 39277874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 45678711 - 45678780
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  45678711 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 45678780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 46448800 - 46448731
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  46448800 aggcttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 46448731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 50227973 - 50227904
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  50227973 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 50227904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 51243037 - 51242968
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||  |||| ||||||||| || || || ||||||||||||||||| ||||||| |||||    
T  51243037 taggcttaaatgcgtttttagtcccttaagtatttattcggtatcgctttggtcccttaattaaaaaaaa 51242968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 24332372 - 24332304
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| |||| |||| || || |||||||||||||||||||| ||| ||| ||||||    
T  24332372 ggcttaaatgctcttttggtcctttaactatttatttggtatcgctttggtcccttaactaaaaaaaag 24332304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 176
Target Start/End: Original strand, 29021595 - 29021667
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||   |||||||| |||||    
T  29021595 ttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 29021667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 30049953 - 30050001
Alignment:
Q  129 gtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||| ||||||| ||||  ||||||||||||||||||||||| ||||    
T  30049953 gtatcggtttggtctcatatgtaataaaaagtccgtttgagtcccttaa 30050001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 38979671 - 38979739
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  38979671 ggcttaaatgctcttttggtcccttaactatttcattggtatcgctttggtcccttaactaaaaaaaag 38979739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 50138495 - 50138563
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  50138495 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 50138563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 50678316 - 50678360
Alignment:
Q  113 cttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||| ||||||||||||||||||  || ||||||||||||||    
T  50678316 cttaattcattttttggtatcgctttaatctcataattaataaaa 50678360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 89 - 261
Target Start/End: Original strand, 39567061 - 39567233
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctg 188  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||    
T  39567061 taggcttaattgttattttcgtcccttaactaattttttggtatcgctttggtcccataattgataaaaagttcatttgagtcctttaaatatgtctctg 39567160  T
Q  189 ttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||||| |||| ||||||  | ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  39567161 ttacataaattggtcccttccgtcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 39567233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 39270853 - 39270684
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    |||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  39270853 aggcttaattgctattttcgtcccttaacttattttttggtatcgttttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctacat 39270754  T
Q  190 tacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcat 259  Q
    ||||||| |||| ||||||  | ||||||||||||||| ||||||| ||||||||||| |||||||||||    
T  39270753 tacataaattggtcccttccgtcaattttattaaaaaactgttagggtttgtacaagttatcaccttcat 39270684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 89 - 261
Target Start/End: Original strand, 44632704 - 44632876
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctg 188  Q
    |||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||| |    
T  44632704 taggtttaattgctattttcgtctcttaattaattttttggtatcgttttggtcccaaaattaataaaaaattcgtttgagtcctttaaatatgtctccg 44632803  T
Q  189 ttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||||| || |  |||||  ||||||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  44632804 ttacataaattagttccttccgttaattttattaaaaaactgttagggtttgtacaagtaatcaccttcattc 44632876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 44633830 - 44633696
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgttac 192  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| ||||    
T  44633830 cttaattgctattttggttccttaactaattttttggtatcgctttggtcccataattaataaaaagtttatttgagtcctttaaatatgtctcttttac 44633731  T
Q  193 ataatttggccccttcaattaattttattaaaaaa 227  Q
    |||| |||| | ||||  |||||||||||||||||    
T  44633730 ataaattggtctcttccgttaattttattaaaaaa 44633696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 39568564 - 39568430
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgttac 192  Q
    ||||||||||||||| ||||||||| ||||||||| |||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||    
T  39568564 cttaattgctatttttgtcccttaactaattttttagtatcgttttggttccataattaataaaaagtttgtttgagtcctttaaatatgtctccgttac 39568465  T
Q  193 ataatttggccccttcaattaattttattaaaaaa 227  Q
    |||| |||| || |||  |||||||||||||||||    
T  39568464 ataaattggtccattccgttaattttattaaaaaa 39568430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 92 - 227
Target Start/End: Complemental strand, 45378605 - 45378470
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtta 191  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||| |||| |||    
T  45378605 gcttaattgctattttcgtcccttaaataattttttggtatcgctttggtcccataattaataaaaattatgtttcagtcctttaaatatgcctctatta 45378506  T
Q  192 cataatttggccccttcaattaattttattaaaaaa 227  Q
     |||| |||| |  |||  |||||||||||||||||    
T  45378505 tataaattggtctattccgttaattttattaaaaaa 45378470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 9311019 - 9311096
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  9311019 taggcttaattgctattttagtcccttatctaattttttggtatcgctttggtcccataactaaaaaaaagtctgttt 9311096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 9312236 - 9312159
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  9312236 taggtttaattgctattttagtcctttaactaattttttggtatcgctttgatcccataactaaaaaaaagtccgttt 9312159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 14816570 - 14816625
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccat 146  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14816570 ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccat 14816625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 14829170 - 14829115
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccat 146  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  14829170 ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccat 14829115  T

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Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 22191958 - 22191876
Alignment:
Q  96 aattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    ||||| |||||||||||||||| || |||||| |||||||||||||||| ||| |||||||||||| ||||||||| |||||||    
T  22191958 aattgttattttcgtcccttaagta-ttttttagtatcgctttggtcccgtaagtaataaaaagtctgtttgagtcttttaaat 22191876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 10134606 - 10134683
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||| |||| |||| ||||||||| || || |||||||||||||||||||||||| |||||||| ||||||||    
T  10134606 taggcttaaatgctctttttgtcccttaagtatttatttggtatcgctttggtcccataagtaataaaaggtccgttt 10134683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 45377427 - 45377478
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtc 142  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  45377427 ggcttaattgttattttcgtcccttaattgattttttggtatcgctttggtc 45377478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 13463212 - 13463153
Alignment:
Q  85 attctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    ||||| |||||||||||| |||||||||||||| | ||| ||||||||||||||||||||    
T  13463212 attcttggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtccc 13463153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 10134976 - 10134900
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||| |||| |||| |||| || || ||| |||||||||||||||||||| |||||||| ||||||||    
T  10134976 aggcttaaatgctcttttggtcctttaagtatttatttagtatcgctttggtcccataagtaataaaaggtccgttt 10134900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 21015265 - 21015213
Alignment:
Q  125 tttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||| ||||    
T  21015265 tttggtatcgctttggtcccataagtaataaaaagtctgtttgggtcccttaa 21015213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 9115599 - 9115669
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  9115599 taggcttaaatgctattttggtcccttaagtatttagttggtatcgctttggtcccctaactaaaaaaaag 9115669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 39269488 - 39269557
Alignment:
Q  160 tccgtttgagtcctttaaatatgtctctgttac--ataatttggccccttcaattaattttattaaaaaa 227  Q
    ||||||||||||||||||||||||||| |||||  |||| |||| | ||||  |||||||||||||||||    
T  39269488 tccgtttgagtcctttaaatatgtctccgttacatataaattggtctcttccgttaattttattaaaaaa 39269557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 43633121 - 43633191
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  43633121 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 43633191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 3318099 - 3318030
Alignment:
Q  88 ctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||| || |||||    
T  3318099 ctaggcttaattactcttttggtcccttaatttattttttggtttcgttttggtcccttaactattaaaa 3318030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 26060692 - 26060623
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| |||||||||||| ||  ||||||||||||||||||| ||| ||| |||||    
T  26060692 taggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaactaaaaaaaa 26060623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 14819430 - 14819391
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttg 128  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  14819430 taggcttaattgctattttagtcccttaactaattttttg 14819391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 11713198 - 11713268
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  11713198 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 11713268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 22594317 - 22594403
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    |||||||| || | |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||   |||||||| |||||    
T  22594317 aggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 22594403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 151
Target Start/End: Original strand, 23152271 - 23152333
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataatta 151  Q
    ||||||||||| || |||| ||||||||||  |||||||||| ||| ||||||||| ||||||    
T  23152271 taggcttaattactcttttggtcccttaatatattttttggtttcgttttggtcccttaatta 23152333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 31445667 - 31445737
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  31445667 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 31445737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 2221593 - 2221662
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  2221593 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 2221662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 7116470 - 7116539
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  7116470 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaa 7116539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 22013461 - 22013530
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  22013461 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 22013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 40449312 - 40449243
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| ||||||||| ||||||||| || ||  ||||||||||||||||| | ||| ||| ||||||    
T  40449312 aggcttaaatgctattttggtcccttaagtatttaattggtatcgctttggtctcttaactaaaaaaaag 40449243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 41155073 - 41155004
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  41155073 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 41155004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 45123219 - 45123288
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  45123219 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 45123288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 4326034 - 4325966
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  4326034 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 4325966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 9739843 - 9739775
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  9739843 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 9739775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 26060105 - 26060173
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  26060105 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaa 26060173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 27786543 - 27786475
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  27786543 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 27786475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 29802158 - 29802226
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  29802158 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 29802226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 36194996 - 36194908
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||| |||| |||| ||||||||| |   ||||  |||||| ||||||||||||| |||| |||| |||||||  |||||||||    
T  36194996 taggcttaaatgctcttttagtcccttaacttgattttaagtatcggtttggtcccataaataatcaaaaatccgtttaggtcctttaa 36194908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 41154617 - 41154685
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  41154617 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 41154685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 42193779 - 42193847
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  42193779 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 42193847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 7e-64; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 86 - 261
Target Start/End: Original strand, 26024882 - 26025057
Alignment:
Q  86 ttctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtct 185  Q
    ||||| ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26024882 ttctaagcttaattgctatcttcgtcccttaacttattttttggtatcgctttggtcccataattaataaaaagtctgtttgagtcctttaaatatgtct 26024981  T
Q  186 ctgttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    | ||||||||| |||| ||||||  | ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  26024982 ccgttacataaattggtcccttccgtcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 26025057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 261
Target Start/End: Complemental strand, 21710661 - 21710489
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctg 188  Q
    |||||| ||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  21710661 taggctgaattgatatttttgtcccttaacttattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccg 21710562  T
Q  189 ttacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    |||||||| |||| |||||   | ||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21710561 ttacataaattggtccctttcttcaattttattaaaaaactgttagggtttgtacaagtcatcaccttcattc 21710489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 21709156 - 21709294
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctg 188  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |    
T  21709156 taggcttaattgctattttcgtcccttaactaattttttagtatcgctttggtcccataattaataaaaagtccgtttaagtcctttaaatatgtcttcg 21709255  T
Q  189 ttacataatttggccccttcaattaattttattaaaaaa 227  Q
    |||||||| |||| ||||||  |||||||||||||||||    
T  21709256 ttacataaattggtcccttccgttaattttattaaaaaa 21709294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 91 - 233
Target Start/End: Complemental strand, 26025924 - 26025782
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtt 190  Q
    ||||||||||||||||| |||| |||| |||||| ||||||| |||||| | ||||||||||||||||||||| |||||||||||||||||||||| |||    
T  26025924 ggcttaattgctatttttgtcctttaactaatttcttggtattgctttgattccataattaataaaaagtccgcttgagtcctttaaatatgtctccgtt 26025825  T
Q  191 acataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    |||||| |||| | ||||  ||||||||||||||||| |||||    
T  26025824 acataaattggtctcttccgttaattttattaaaaaaatgtta 26025782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 10990654 - 10990568
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    ||||||| ||||||||||| ||||  || |||||| ||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  10990654 cttaattactattttcgtctcttatgtatttttttagtatcgctttgatcccataagtaataaaaagtctgtttgagtcctttaaat 10990568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 177
Target Start/End: Complemental strand, 24485908 - 24485816
Alignment:
Q  85 attctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||||||||||||  |||  || ||||| || || |||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||    
T  24485908 attctaggcttaattgcttatttgttcacttaaatatttatttggtatcgttttggtcccataagtaataaaaagtccgtttaagtcccttaa 24485816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 45088310 - 45088235
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||  ||||||||||||| ||| |||| ||||||||    
T  45088310 ggcttaattgctattttagtcccttaactaattgtttggtatcagtttggtcccataactaaaaaaaggtccgttt 45088235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 45087067 - 45087140
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||||| |||| |||| |||||||||||||||| ||||||||||||| ||| |||| ||||||||    
T  45087067 cttaattgttattttagtcctttaactaattttttggtatcggtttggtcccataactaaaaaaaggtccgttt 45087140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 10986695 - 10986764
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagt 160  Q
    ||||||||| || |||||||||||||| || ||||||||||||| |||| ||| |||||| |||||||||    
T  10986695 ggcttaatttctcttttcgtcccttaactatttttttggtatcgttttgctcctataattgataaaaagt 10986764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 30766743 - 30766674
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||||| |||||||||||||| | ||| ||||||||| |||||||||| ||| ||| ||||||    
T  30766743 aggcttaattgcttttttcgtcccttaagttattatttggtatcactttggtcccttaagtaaaaaaaag 30766674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 40738193 - 40738254
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    |||||||||||||||||||||||| || |||||  || |||||||||||||||| |||||||    
T  40738193 ggcttaattgctattttcgtccctcaactaattaattagtatcgctttggtcccttaattaa 40738254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 16962847 - 16962919
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| |||| |||| ||||||||| || || |||||||||||||||||| ||||| |||||||| ||||||||    
T  16962847 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtctcataagtaataaaaggtccgttt 16962919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 166
Target Start/End: Original strand, 26041506 - 26041582
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||| |||| ||||||||| || || ||  |||||||||||||||||||| |||||||| ||||||||    
T  26041506 aggcttaaatgctcttttggtcccttaagtatttattcagtatcgctttggtcccataagtaataaaaggtccgttt 26041582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 19543492 - 19543551
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    ||||||||||||||||||||||||| || || ||| ||||||||||| |||| |||||||    
T  19543492 cttaattgctattttcgtcccttaactatttatttagtatcgctttgatcccttaattaa 19543551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 26041873 - 26041807
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||| |||| |||| ||||||||| || || ||||||||||||||||||| |||| ||||||||    
T  26041873 ggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcctataagtaataaaa 26041807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 40740104 - 40740046
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    ||||||| |||||| |||||||||||| || ||| |||||||||||||||| |||||||    
T  40740104 ttaattgttattttagtcccttaattatttatttagtatcgctttggtcccttaattaa 40740046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 45596867 - 45596945
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaa-ttttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||||||||||  |||||||| ||| ||||||||||||| |||| |  ||||| ||| |||||||||||||    
T  45596867 taggcttaattgctattttaatcccttaactaatttttttggtatcggtttgataacataactaaaaaaaagtccgttt 45596945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 43704943 - 43705012
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| |||||    
T  43704943 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaa 43705012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 45457163 - 45457094
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  45457163 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 45457094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 472930 - 472858
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| |||| |||| ||||||||| || || |||||||||||||||||||||||| |||| ||  ||||||||    
T  472930 ttaaatgcttttttggtcccttaagtatttatttggtatcgctttggtcccataagtaatgaactgtccgttt 472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 8736184 - 8736116
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||| || |||||    
T  8736184 taggcttaattactcttttggtcccttaatttattttttggtgtcgttttggtcccttaactattaaaa 8736116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 161
Target Start/End: Original strand, 38030332 - 38030397
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtc 161  Q
    |||||| ||||||||||||||||  |  |||||| ||||||||||| |||||||| ||||||||||||    
T  38030332 ttaatttctattttcgtcccttacgt--ttttttagtatcgctttgatcccataagtaataaaaagtc 38030397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 27284239 - 27284310
Alignment:
Q  88 ctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  27284239 ctaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 27284310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 3217814 - 3217744
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  3217814 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 3217744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 7777017 - 7776947
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  7777017 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 7776947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 17279503 - 17279449
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcc 143  Q
    |||| ||||||||| ||||| |||||||| | ||| |||||||||||||||||||    
T  17279503 taggtttaattgctcttttcatcccttaagttattatttggtatcgctttggtcc 17279449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 159
Target Start/End: Complemental strand, 25445134 - 25445068
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||| |||||||||||||| | ||| |||| |||| |||||||||| ||| ||| ||||||    
T  25445134 cttaattgctcttttcgtcccttaagttattatttgatatcactttggtcccttaagtaaaaaaaag 25445068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 39143571 - 39143501
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  39143571 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 39143501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 47987325 - 47987395
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  47987325 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 47987395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 24846566 - 24846493
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||| |||| |||| || || ||| ||||||||||||| |||||| |||||||| |||||||| ||||| ||||    
T  24846566 tttttgtcctttaagtatttatttagtatcgctttggttccataaataataaaaggtccgttttagtcccttaa 24846493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 31852141 - 31852072
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  31852141 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 31852072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 37374516 - 37374447
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  37374516 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 37374447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 40851763 - 40851848
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgag 169  Q
    |||| ||||||||| |||| |||| ||||||||| || ||  |||||||||||||||| || ||| ||| ||||||  ||||||||    
T  40851763 tattttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaactaaaaaaaagatcgtttgag 40851848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 40852219 - 40852150
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  40852219 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 40852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 158
Target Start/End: Original strand, 42287313 - 42287378
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| |||||    
T  42287313 cttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaagaaaaa 42287378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 45456733 - 45456802
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  45456733 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 45456802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 24733627 - 24733695
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  24733627 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaa 24733695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 27284667 - 27284599
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  27284667 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 27284599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 42754538 - 42754594
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataat 149  Q
    ||||| |||| |||||||||||||| || || ||||||||| |||||||||| ||||    
T  42754538 cttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaat 42754594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 48095422 - 48095354
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  48095422 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaa 48095354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 1e-62; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 92 - 261
Target Start/End: Complemental strand, 21817457 - 21817288
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgtta 191  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21817457 gcttaattactattttcatcccttaactaattttttggtatcgctttggtcccataattaataaaaagtctgtttgagtcctttaaatatgtctctgtta 21817358  T
Q  192 cataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||| || | ||||||  ||||||||||||||||| ||||||| |||||||||||||||||||| ||||    
T  21817357 cataacttagtcccttccgttaattttattaaaaaactgttagggtttgtacaagtcatcaccttaattc 21817288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 92 - 227
Target Start/End: Original strand, 21815909 - 21816045
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagt-cctttaaatatgtctctgtt 190  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21815909 gcttaattgctattttcgtcccttaactaattttttagtatcgctttggttccataattaataaaaagtccgtttgagtccctttaaatatgtctctgtt 21816008  T
Q  191 acataatttggccccttcaattaattttattaaaaaa 227  Q
    |||||| |||| ||||||  |||||||||||||||||    
T  21816009 acataaattggtcccttccgttaattttattaaaaaa 21816045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 14859193 - 14859103
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    |||||||||||||||||||| |||||||| || |||||| ||||||||||||| |||||| ||||||||||||  |||||||| |||||||    
T  14859193 taggcttaattgctattttcttcccttaaatatttttttagtatcgctttggttccataagtaataaaaagtctatttgagtcatttaaat 14859103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 27688484 - 27688561
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||| ||| |||||||||||||    
T  27688484 taggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactaaaaaaaagtccgttt 27688561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 27695638 - 27695558
Alignment:
Q  86 ttctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||| | | |||||||||||||    
T  27695638 ttctaggcttaattgctattttagtcccttaactaattatttggtatcggtttggtcccataactgaaaaaaagtccgttt 27695558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 39992554 - 39992477
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||| |||| ||||||||||||| |||||| ||||||    
T  39992554 taggcttaattactattttagtcccttaactaattttttggtatcacttttgtcccataattaaaaaaaagaccgttt 39992477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 36982649 - 36982735
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    |||||| |||| |||||||||||||||||||  |||||  || ||||||||||||||||| |||||||||||| ||||||||||||||    
T  36982649 taggctcaatttctattttcgtcccttaattt-tttttaagtgtcgctttggtcccataagtaataaaaagtctgtttgagtccttta 36982735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 37008088 - 37008174
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    |||||| |||| |||||||||||||||||||  |||||  || ||||||||||||||||| |||||||||||| ||||||||||||||    
T  37008088 taggctcaatttctattttcgtcccttaattt-tttttaagtgtcgctttggtcccataagtaataaaaagtctgtttgagtccttta 37008174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 20184446 - 20184523
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||| ||| || || |||||||    
T  20184446 taggcttaattgttattttagtcccttaactaattttttggtatcggtttggtcccataactaaaaataaatccgttt 20184523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 32304230 - 32304300
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||||| |||||||||||||| | ||| |||||||||||||||||||| ||| ||| ||||||    
T  32304230 taggcttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaag 32304300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 24244832 - 24244756
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| ||||||||| ||||||||| || || ||||||||||||||| | |||||| |||||||| ||||||||    
T  24244832 aggcttaaatgctattttggtcccttaagtatttatttggtatcgctttgataccataagtaataaaaggtccgttt 24244756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 43464812 - 43464884
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccg 163  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||||||| |||||||| |||||    
T  43464812 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataagtaataaaaggtccg 43464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 13302021 - 13301939
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| ||||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||||||||  |||||||    
T  13302021 tattataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccgtaagtaataaaagatccgttt 13301939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 13312677 - 13312595
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| ||||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||||||||  |||||||    
T  13312677 tattataggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccgtaagtaataaaagatccgttt 13312595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 159
Target Start/End: Original strand, 39198418 - 39198485
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||| | ||||||| |||||||||||| ||  ||||||||||||||||||| ||||||| ||||||    
T  39198418 gcttaaatactattttggtcccttaattatttaattggtatcgctttggtcccttaattaaaaaaaag 39198485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 52857343 - 52857268
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||| |||||    
T  52857343 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaaataaaaaaaagttcgttt 52857268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 20185872 - 20185802
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagt 160  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||| |||| |||||||| ||| |||||||    
T  20185872 aggcttaattgctattttagtccattacctaatttttttgtatcggtttgatcccataactaaaaaaaagt 20185802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 26247224 - 26247162
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| ||||||||| || || ||| |||||||||||||||||||| |||||||| ||||||||    
T  26247224 ttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtccgttt 26247162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 45940740 - 45940670
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  45940740 taggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 45940670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 6276060 - 6276133
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||| |||| |||| ||||||||| || || ||||||||||||||| ||| |||| |||||||| ||||||||    
T  6276060 cttaaatgctcttttggtcccttaagtatttatttggtatcgctttgatccaataagtaataaaaggtccgttt 6276133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 17509464 - 17509517
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    |||||||||| | |||||||||||||| | ||| ||||||||||||||||||||    
T  17509464 ggcttaattgttcttttcgtcccttaagttattatttggtatcgctttggtccc 17509517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 18024982 - 18024909
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||||||||| ||| ||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  18024982 tattctaggcttaattactaatttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 18024909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 42540163 - 42540216
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    ||||||||| || |||||||||||||| | ||| ||||||||||||||||||||    
T  42540163 ggcttaattactcttttcgtcccttaagttattatttggtatcgctttggtccc 42540216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 49221505 - 49221574
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||| ||||||| |||||| ||||||||| ||||||||||||||||  || ||||||||| ||| |||||    
T  49221505 taggtttaattgttatttttgtcccttaactaattttttggtatcgggttagtcccataactaaaaaaaa 49221574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 4953457 - 4953405
Alignment:
Q  125 tttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||||| ||||||||||||| |||||||||||| |||| ||||| ||||    
T  4953457 tttggtatcgttttggtcccataagtaataaaaagtctgtttaagtcccttaa 4953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 40503790 - 40503722
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||||||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  40503790 ggcttaattgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 40503722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 46453242 - 46453166
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| ||||  ||| ||||||||| || || |||||||| | ||||||| ||||| |||||||||||||||||    
T  46453242 aggcttaaatgctcatttggtcccttaaatatttatttggtattgttttggtctcataagtaataaaaagtccgttt 46453166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 4953124 - 4953195
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtcc 162  Q
    ||||||| |||| |||| |||||||||  | || |||||||||||||||||||| ||| |||||||| ||||    
T  4953124 ggcttaaatgctcttttggtcccttaaggatttatttggtatcgctttggtcccttaagtaataaaaggtcc 4953195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 48085305 - 48085230
Alignment:
Q  83 atattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||| ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  48085305 atattttaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaa 48085230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 12739962 - 12740032
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  12739962 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 12740032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 13355173 - 13355243
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| || | |||| ||||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  13355173 taggcttaaatgttcttttagtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 13355243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 24242446 - 24242516
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| |||||||||||| ||  ||||||||| ||||||||| ||| ||| ||||||    
T  24242446 taggcttaaatgctcttttggtcccttaattatttaattggtatcgttttggtcccttaagtaaaaaaaag 24242516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 24243057 - 24242987
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  24243057 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 24242987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 42213590 - 42213524
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| || |||||||||||||| | |||||||||| ||| |||||| || |||||| |||||    
T  42213590 ggcttaattacttttttcgtcccttaacttattttttggtttcgttttggttccttaattattaaaa 42213524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 177
Target Start/End: Original strand, 50530625 - 50530703
Alignment:
Q  99 tgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||    
T  50530625 tgctattttagtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 50530703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 44712124 - 44712055
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  44712124 aggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaaaaag 44712055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 51676196 - 51676127
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| |||||||||||| ||  ||||||||||||| ||||| ||| ||| |||||    
T  51676196 taggcttaaatgctcttttggtcccttaattatttaattggtatcgctttcgtcccttaactaaaaaaaa 51676127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 6098400 - 6098452
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    |||||||| || |||| ||||||||||| |||||||||| ||| |||||||||    
T  6098400 gcttaattactcttttggtcccttaatttattttttggtttcgttttggtccc 6098452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 12061622 - 12061690
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  12061622 taggcttaattactcttttggtcccttaacttattttttggtgtcgttttggtcccttaactattaaaa 12061690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 34819686 - 34819610
Alignment:
Q  83 atattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||| ||| |||||||||| |||||||||||||| | ||| |||||||| | |||||| || ||| ||| ||||||    
T  34819686 atattatagacttaattgctcttttcgtcccttaagttattatttggtattgatttggttccttaagtaaaaaaaag 34819610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 44475711 - 44475643
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| |||| ||||||| ||  ||||||||||||||||||| ||| ||| ||||||    
T  44475711 ggcttaaatgctcttttggtccattaattatttaattggtatcgctttggtcccttaactaaaaaaaag 44475643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 45421122 - 45421190
Alignment:
Q  109 gtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||||||||||| |  || || |||||||||| ||||||||||||  | ||||| ||||||||||    
T  45421122 gtcccttaattaatttctaagtttcactttggtcccctaattaataaaagtttcgttttagtcctttaa 45421190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 45940215 - 45940283
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  45940215 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 45940283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 48946175 - 48946243
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| |||| |||| |||||||||||| ||  ||| ||||||||||||||| ||| ||| ||||    
T  48946175 taggcttaaatgctctttttgtcccttaattatttaattgatatcgctttggtcccttaactaaaaaaa 48946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 49220152 - 49220200
Alignment:
Q  129 gtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||| ||| ||||||||| |||||||||||||||||  |||||||||    
T  49220152 gtatcggtttagtcccataaataataaaaagtccgtttaggtcctttaa 49220200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 158
Target Start/End: Complemental strand, 53228273 - 53228205
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||||||| | || |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  53228273 aggcttaaatactcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaa 53228205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 116; Significance: 4e-59; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 90 - 261
Target Start/End: Complemental strand, 129478 - 129307
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgt 189  Q
    ||||||||||| |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  129478 aggcttaattgttattttcgtcccttaacttattttttggtatcactttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctccgt 129379  T
Q  190 tacataatttggccccttcaattaattttattaaaaaattgttaggatttgtacaagtcatcaccttcattc 261  Q
    ||||||| |||| ||||||  | |||||||||||||||   ||||| |||||||||||||||||||||||||    
T  129378 tacataaattggtcccttccgtcaattttattaaaaaaccattagggtttgtacaagtcatcaccttcattc 129307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 123416 - 123566
Alignment:
Q  83 atattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatg 182  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  123416 atattttaggcttaattgctattttcgtcccttaactaatttcttggtattgctttggtcccataattaataaaaagtccgcttgagtcctttaaatatg 123515  T
Q  183 tctctgttacataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    |||| ||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  123516 tctccgttacataaattggtcccttccgttaattttattaaaaaaatgtta 123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 233
Target Start/End: Original strand, 134292 - 134442
Alignment:
Q  83 atattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatg 182  Q
    ||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  134292 atattttaggcttaattgctattttcgtcccttaactaatttcttggtattgctttggtcccataattaataaaaagtccgcttgagtcctttaaatatg 134391  T
Q  183 tctctgttacataatttggccccttcaattaattttattaaaaaattgtta 233  Q
    |||| ||||||||| |||| ||||||  ||||||||||||||||| |||||    
T  134392 tctccgttacataaattggtcccttccgttaattttattaaaaaaatgtta 134442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 36888337 - 36888424
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||    
T  36888337 aggcttaattgctattttagtcccttagctaattttttggtatcggtttggtcccataactaataaaaagtctgtttgagtcctttaa 36888424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 36889806 - 36889719
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||    
T  36889806 aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataattaataaaaagtctatttgaatcctttaa 36889719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 34166841 - 34166918
Alignment:
Q  89 taggcttaattgctattttcgtcccttaatta-attttttggtatcgctttggtcccataattaataaaaagtccgtt 165  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||  ||| ||||||||||||||||||||| ||||    
T  34166841 taggcttaattgctattttcgtcccttaaatattttttttggtatcagttttgtcccataattaataaaaagttcgtt 34166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 7184879 - 7184949
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||| |||| |||||||| ||| ||||||    
T  7184879 taggcttaattgctattttagtctcttaactaattttttggtatcggtttgatcccataactaaaaaaaag 7184949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 166
Target Start/End: Original strand, 13809426 - 13809499
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| ||||||| | ||||||| ||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  13809426 gcttaatttctattttaggcccttaactaattttttggtatcgctttgatcctataattaa-aaaaagtccgttt 13809499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 35738361 - 35738419
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccata 147  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||| |||||    
T  35738361 taggcttaattactattttcgttccttaactaattttttggtatcgctttggttccata 35738419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 13810638 - 13810566
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccg 163  Q
    ||||||||||||| ||||| ||| ||||| |||||||  ||||||||||||||||||||| ||| ||||||||||    
T  13810638 taggcttaattgcaattttagtctcttaactaatttt--ggtatcgctttggtcccataactaaaaaaaagtccg 13810566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 19297516 - 19297595
Alignment:
Q  80 agaatattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||| |||| ||||||||||||| |||||||||||||| | ||| |||||||||| ||||||||| ||| ||| ||||||    
T  19297516 agaagattcaaggcttaattgctcttttcgtcccttaagttattatttggtatcgttttggtcccttaagtaaaaaaaag 19297595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 40468049 - 40468114
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||||||||||||| | ||| |||||||||||||||||||| ||| ||| ||||||    
T  40468049 ttaattgctcttttcgtcccttaagttattatttggtatcgctttggtcccttaagtaaaaaaaag 40468114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 20686737 - 20686669
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||||||| |||||||||||||| | ||| |||||||| ||||||||||| ||| ||| ||||    
T  20686737 taggcttaattgcttttttcgtcccttaagttattatttggtattgctttggtcccttaagtaaaaaaa 20686669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 38978964 - 38978896
Alignment:
Q  109 gtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||| || || |||||||||||||||||||||||  ||||||||||| |||||| |||| ||||    
T  38978964 gtcccttaaatatttatttggtatcgctttggtcccatatgtaataaaaagttcgtttgggtcccttaa 38978896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 26424884 - 26424814
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||||||| ||||||    
T  26424884 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaattaaaaaaaag 26424814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 84 - 158
Target Start/End: Complemental strand, 28190553 - 28190479
Alignment:
Q  84 tattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||| |||||||||||||| |||||||||||||| | ||| |||||||||  ||||||||| ||| ||| |||||    
T  28190553 tattataggcttaattgcttttttcgtcccttaagttattatttggtatcattttggtcccttaagtaaaaaaaa 28190479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 3603504 - 3603557
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    |||||||||| |||||||||||||||| || || ||| ||||||||||||||||    
T  3603504 ggcttaattgttattttcgtcccttaactatttatttagtatcgctttggtccc 3603557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 3607104 - 3607036
Alignment:
Q  86 ttctaggcttaattgctattttcgtcccttaattaatttt--ttggtatcgctttggtcccataattaa 152  Q
    ||||| ||||||||||||||||||| ||||||||||||||  || ||||||||||| | || |||||||    
T  3607104 ttctatgcttaattgctattttcgttccttaattaattttaattagtatcgctttgattccttaattaa 3607036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 5381535 - 5381624
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaat 179  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||||    
T  5381535 aggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaaat 5381624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 8028966 - 8029019
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    |||||||||||||||| |||| ||||| | ||| ||||||||||||||||||||    
T  8028966 ggcttaattgctatttccgtctcttaagttattatttggtatcgctttggtccc 8029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 10413995 - 10414047
Alignment:
Q  92 gcttaattgctattttcgtcccttaattaattttttggtatcgctttggtccc 144  Q
    |||||||| ||||||| ||||||||||| |||||||||| ||| |||||||||    
T  10413995 gcttaattactattttggtcccttaatttattttttggtttcgttttggtccc 10414047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 177
Target Start/End: Original strand, 16203446 - 16203530
Alignment:
Q  93 cttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||| |||| |||| ||||||||| || || ||||||||||||||| || | ||| |||||||| |||||||| ||||| ||||    
T  16203446 cttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatctcgtaagtaataaaaggtccgtttaagtcccttaa 16203530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 16581653 - 16581577
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||  |||| ||||||||| || || ||| |||||||||||||||||||| |||||||| ||| ||||    
T  16581653 aggcttaaatgcacttttggtcccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtctgttt 16581577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 27516153 - 27516225
Alignment:
Q  85 attctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  27516153 attctaggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 27516225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 38578242 - 38578174
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| |||||| |||||    
T  38578242 taggcttaattactcttttggtcccttaacttattttttggtgtcgttttggtcccttaattattaaaa 38578174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 15044738 - 15044825
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    |||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||  ||| ||| ||||||   |||||||| ||||||    
T  15044738 aggcttaagtgctattttggtcccttaactatttaattggtatcgctttggtcctttaactaaaaaaaagattgtttgagtactttaa 15044825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 16581338 - 16581412
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||| |||| |||| ||||||||| || || ||||| ||||||||||| |||||| |||||||| ||||||||    
T  16581338 ggcttaaatgctcttttggtcccttaagtatttatttgggatcgctttggt-ccataagtaataaaaggtccgttt 16581412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 28957786 - 28957861
Alignment:
Q  82 aatattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||| ||| ||||||| || |||| ||||||||||| |||||||||| ||| ||||||||| ||| || |||||    
T  28957786 aatattatagacttaattactcttttggtcccttaatttattttttggtttcgttttggtcccttaactattaaaa 28957861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 4602877 - 4602807
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  4602877 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 4602807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 9401118 - 9401188
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  9401118 taggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaag 9401188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 16203797 - 16203735
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| ||||||||| ||  | ||| |||||||||||||||||||| |||||||| ||||||||    
T  16203797 ttttggtcccttaagtatctatttagtatcgctttggtcccataagtaataaaaggtccgttt 16203735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Original strand, 25945826 - 25945892
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||| || | |||| ||||||||| || || || ||||||||||||||||||||| ||||||||    
T  25945826 ggcttaaatgatcttttggtcccttaagtatttattcggtatcgctttggtcccataagtaataaaa 25945892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 32194889 - 32194819
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  32194889 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 32194819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 11131243 - 11131174
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||| ||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||    
T  11131243 aggcataaatgctcttttagtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaag 11131174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 33200027 - 33200096
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| ||||||||| |||| |||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  33200027 aggcttaaatgctattttggtcctttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 33200096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 43820387 - 43820318
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| ||||||||| || |||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  43820387 aggcttaaatgctattttggttccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 43820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 7031803 - 7031871
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  7031803 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 7031871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 34618580 - 34618512
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  34618580 ggcttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 34618512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 71887 - 71813
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtt 165  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||    
T  71887 ggcttaattgctattttagtcccttaactaattttttggtatcgctttggtcccataactaaaaaaaggtccgtt 71813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 90 - 158
Target Start/End: Original strand, 70668 - 70736
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    |||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  70668 aggcttaattgctattttagtcccttaactaattttttggtatcggtttggtcccataactaaaaaaaa 70736  T

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Target: scaffold0394 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 14268 - 14346
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaatttt-ttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| ||| |||||||||||||    
T  14268 taggcttaattgctattttagtcccttaactaatttttttggtatcggtttggtcccataactaaaaaaaagtccgttt 14346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 19718950 - 19718873
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||| ||| |||| ||| ||||| |||||||    
T  19718950 taggcttaattgctattttagtcctttaactaattttttggtatcgctttgatcctataactaaaaaaaaatccgttt 19718873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 166
Target Start/End: Complemental strand, 35463912 - 35463855
Alignment:
Q  109 gtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||| || || |||||||||||||||||||||||| |||||||||||| ||||    
T  35463912 gtcccttaaatatttatttggtatcgctttggtcccataagtaataaaaagtctgttt 35463855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 30112769 - 30112682
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||||||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||    
T  30112769 aggcttaattgctcttttagtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagttctttaa 30112682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 25333247 - 25333161
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    |||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||  ||||||| ||||||   |||||||| |||||    
T  25333247 aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcctttaattaaaaaaaagattgtttgagtacttta 25333161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 4959558 - 4959627
Alignment:
Q  88 ctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  4959558 ctaggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaa 4959627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 6793766 - 6793835
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||||||| |||| ||||||||| | ||| ||||||||| |||||||||| ||| ||| ||||||    
T  6793766 aggcttaattgctctttttgtcccttaagttattatttggtatcactttggtcccttaagtaaaaaaaag 6793835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 23083635 - 23083570
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||||||||||||| | ||| |||||||||| ||||||||| ||| ||| ||||||    
T  23083635 ttaattgctcttttcgtcccttaagttattatttggtatcgttttggtcccttaagtaaaaaaaag 23083570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 176
Target Start/End: Complemental strand, 30645785 - 30645700
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||   |||||||| |||||    
T  30645785 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacttta 30645700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 35463560 - 35463637
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||| |||| |||| ||||||||| || || ||||||||||||||| |||| ||| |||||||| ||| ||||    
T  35463560 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatcccttaagtaataaaatgtctgttt 35463637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 1983613 - 1983541
Alignment:
Q  94 ttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||| |||| |||| || |||||| || || ||| |||||||||||||||||||| |||||||| ||||||||    
T  1983613 ttaaatgctcttttggttccttaagtatttatttagtatcgctttggtcccataagtaataaaaggtccgttt 1983541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 158
Target Start/End: Original strand, 14347401 - 14347468
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  14347401 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaa 14347468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 152
Target Start/End: Original strand, 37966812 - 37966875
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    |||||||||||| |||||||||||||||| || ||  || ||||  ||||||||||||||||||    
T  37966812 taggcttaattgttattttcgtcccttaactatttaattagtattactttggtcccataattaa 37966875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 38384866 - 38384953
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtccttta 176  Q
    ||||||||| |||  ||||  |||||||| || || |||||||||||||||||||| ||||||| ||||||   |||||||| |||||    
T  38384866 taggcttaaatgcgtttttgatcccttaactatttatttggtatcgctttggtcccttaattaaaaaaaagattgtttgagtacttta 38384953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 42026730 - 42026655
Alignment:
Q  83 atattctaggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||| ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || ||||||    
T  42026730 atattttaggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaaa 42026655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 435552 - 435622
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  435552 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 435622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 16670088 - 16670018
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  16670088 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 16670018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Complemental strand, 24042739 - 24042669
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||||| |||  |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||    
T  24042739 taggcttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaag 24042669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 30644914 - 30645000
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||| ||||||| ||| ||| ||||||   |||||||| ||||||    
T  30644914 ggcttaaatgctcttttggtcccttaaatatttatttggtatcgctatggtcccttaactaaaaaaaagattgtttgagtactttaa 30645000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 9378785 - 9378728
Alignment:
Q  96 aattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaat 153  Q
    |||||||| ||| |||| |||| || |||||||||||| |||||||| ||||||||||    
T  9378785 aattgctaatttggtccattaactatttttttggtatcactttggtcgcataattaat 9378728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 158
Target Start/End: Complemental strand, 14662695 - 14662662
Alignment:
Q  125 tttggtatcgctttggtcccataattaataaaaa 158  Q
    |||||||||||||||||||||||| |||||||||    
T  14662695 tttggtatcgctttggtcccataagtaataaaaa 14662662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Original strand, 17339794 - 17339863
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  17339794 aggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 17339863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 18508855 - 18508814
Alignment:
Q  125 tttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||||| ||||||||||||| |||||||||||| ||||    
T  18508855 tttggtatcgatttggtcccataaataataaaaagtctgttt 18508814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 24100759 - 24100690
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  24100759 aggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 24100690  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 28905517 - 28905448
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| || | |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  28905517 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaa 28905448  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Complemental strand, 28941912 - 28941843
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| || | |||| ||||||||| || || |||||||||||||||||||| ||| ||| |||||    
T  28941912 taggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaa 28941843  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 1030821 - 1030873
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcc 143  Q
    ||||||| ||||||||| |||||||||||| ||  ||| ||||||||||||||    
T  1030821 ggcttaaatgctattttggtcccttaattatttaattgatatcgctttggtcc 1030873  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 5187181 - 5187113
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  5187181 taggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaaaa 5187113  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 14233154 - 14233066
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||| ||||||||| ||| ||||| || ||  ||||||||||||||||| | ||| ||| ||||||   |||||||| ||||||    
T  14233154 taggcttaaatgctattttggtctcttaagtatttaattggtatcgctttggtctcttaactaaaaaaaagattgtttgagtactttaa 14233066  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 14858635 - 14858567
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||| | ||| ||||||||| |||||| |||||    
T  14858635 taggcttaattactcttttggtcccttaacttattttttgatttcgttttggtcccttaattattaaaa 14858567  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 17115687 - 17115611
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| |||| |||| ||||||||  || || ||| |||||| ||||||||||||| |||||||| || |||||    
T  17115687 aggcttaaatgctcttttggtcccttacgtatttatttagtatcgttttggtcccataagtaataaaaggttcgttt 17115611  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 22803650 - 22803582
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  22803650 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 22803582  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 27851101 - 27851033
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  27851101 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 27851033  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 29962239 - 29962171
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  29962239 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 29962171  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 30012559 - 30012627
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  30012559 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 30012627  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 192
Target Start/End: Complemental strand, 37192517 - 37192429
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaaatatgtctctgttac 192  Q
    |||| ||||||||| || || |||||||||||||||||||| ||| ||| ||||||    ||||||| ||||| || | ||||||||||    
T  37192517 ttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtactttatatttatctctgttac 37192429  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 37812229 - 37812297
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    ||||||||||| || |||| ||||||||| | |||||||||| ||| ||||||||| ||| || |||||    
T  37812229 taggcttaattactcttttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaa 37812297  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 38312325 - 38312393
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  38312325 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 38312393  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 39547777 - 39547829
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcc 143  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||    
T  39547777 ggcttaaatgcttttttggtcccttaaatatttatttggtatcgctttggtcc 39547829  T

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Target: scaffold0220 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 177
Target Start/End: Original strand, 25963 - 26049
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||| |||| |||| ||||||||| || || |||||||||||||||||||||||| |||||||||||  |||| ||||| ||||    
T  25963 ggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccataagtaataaaaagtttgtttaagtcccttaa 26049  T

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Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 26331 - 26255
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    |||||||| || | |||| ||||||||| || || ||| |||||| ||||||||||||| |||||||| ||||||||    
T  26331 aggcttaaatgatcttttggtcccttaagtatttatttagtatcgttttggtcccataagtaataaaaggtccgttt 26255  T

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Target: scaffold0194 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 19304 - 19229
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgttt 166  Q
    ||||||||||| || ||| || |||||| |||||||||| ||||| ||||||||||||| ||| |||||||||||||    
T  19304 aggcttaattgttactttagttccttaactaattttttgatatcggtttggtcccataactaa-aaaaagtccgttt 19229  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000009; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 428983 - 429049
Alignment:
Q  104 ttttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagt 170  Q
    |||| ||||||||| | ||| |||||||||||||||||||| ||| ||| |||||| ||||||||||    
T  428983 ttttggtcccttaagttattatttggtatcgctttggtcccttaaataaaaaaaagaccgtttgagt 429049  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 429208 - 429159
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgcttt 138  Q
    |||||||||||||| |||| ||||||||| | ||| ||||||||||||||    
T  429208 taggcttaattgcttttttggtcccttaagttattatttggtatcgcttt 429159  T

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Target: scaffold0002; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 283232 - 283164
Alignment:
Q  91 ggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    ||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  283232 ggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 283164  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 159
Target Start/End: Complemental strand, 83445 - 83376
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaag 159  Q
    |||||||| ||||||||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||    
T  83445 aggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaag 83376  T

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Target: scaffold0054 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 57617 - 57530
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaagtccgtttgagtcctttaa 177  Q
    ||||||||||| | |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||||   |||||||| ||||||    
T  57617 aggcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaa 57530  T

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Target: scaffold0054; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 57020 - 57088
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaa 157  Q
    |||||||||||| | |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| ||||    
T  57020 taggcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaa 57088  T

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Target: scaffold0352 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 139
Target Start/End: Original strand, 11134 - 11183
Alignment:
Q  90 aggcttaattgctattttcgtcccttaattaattttttggtatcgctttg 139  Q
    |||||||||| ||||||| ||||||||||| |||||||||| ||| ||||    
T  11134 aggcttaattactattttggtcccttaatttattttttggtttcgttttg 11183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 1473 - 1542
Alignment:
Q  89 taggcttaattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaataaaaa 158  Q
    ||||||||| |||| |||| ||||||||| || ||  ||||||||||||||||||| ||| ||| |||||    
T  1473 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaactaaaaaaaa 1542  T

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Target: scaffold0430 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 6289 - 6233
Alignment:
Q  96 aattgctattttcgtcccttaattaattttttggtatcgctttggtcccataattaa 152  Q
    |||||||||||||||| ||||| || ||  || ||||||||||| ||||||||||||    
T  6289 aattgctattttcgtctcttaactatttaattagtatcgctttgatcccataattaa 6233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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