View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21125_low_18 (Length: 230)
Name: NF21125_low_18
Description: NF21125
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21125_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 18842078 - 18841867
Alignment:
| Q |
1 |
tcaattcctttgtttctggcattaaaatgtactttttgacaattgtaaatgtgttttcaacagaaagcttgaagaaacttcttcccttgtttactttata |
100 |
Q |
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| T |
18842078 |
tcaattcctttgtttctggcattaaaatgtactttttgacaattttaaatgtgttttcaacagaaagcttgaagaaacttcttcccttgtttactttata |
18841979 |
T |
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| Q |
101 |
gtccaatcctaaacaacctacaagctaaaactatcatcttacaagtttttatgtcatagtaaattgtgttgcattgagctcttaaaacatgttgtgtact |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
18841978 |
gtcctatcctaaacaacctacaagctaaaactatcatcttacaagtttttatgtcatagtaaattttgttgcattgagctcttaaaacatgttgtgtact |
18841879 |
T |
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| Q |
201 |
atacgagatttt |
212 |
Q |
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|||||||||||| |
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| T |
18841878 |
atacgagatttt |
18841867 |
T |
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