View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21126_high_9 (Length: 240)
Name: NF21126_high_9
Description: NF21126
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21126_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 222
Target Start/End: Original strand, 24337230 - 24337450
Alignment:
| Q |
2 |
ttaagtccaaaaattagtagcagaaacaaaaacaatactaattctcaggtagcaaggtttccaggagagacaaattatggtgcaaaaagacatggacaac |
101 |
Q |
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| T |
24337230 |
ttaagtccaaaaattagtagcagaaacaaaaacaatactaattctcaggtggcaaggtttccaggagagacaaattatggtgcaaaaagacatggacaac |
24337329 |
T |
|
| Q |
102 |
aacatggttataccacaccaccattgcaagcctctaactcaccacatgcttcaaagttactatacatttagcaatagtttgcaatgaaacgtgaacactt |
201 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||| |
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| T |
24337330 |
aacatggttataccacaccaccattgcaggcctctaactcaccacatgcttcaaagttactatacatttagcaatagtttgctatgtaaaacaaacactt |
24337429 |
T |
|
| Q |
202 |
cagattcgaaggcgcgactat |
222 |
Q |
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|| ||| ||||||| |||||| |
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| T |
24337430 |
cacatttgaaggcgtgactat |
24337450 |
T |
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