View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21128_low_30 (Length: 276)

Name: NF21128_low_30
Description: NF21128
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21128_low_30
NF21128_low_30
[»] chr7 (26 HSPs)
chr7 (1-254)||(17260481-17260734)
chr7 (1-254)||(17268179-17268432)
chr7 (47-206)||(8636064-8636223)
chr7 (31-206)||(8667707-8667882)
chr7 (31-254)||(8671335-8671558)
chr7 (136-254)||(8585516-8585634)
chr7 (31-201)||(13333161-13333331)
chr7 (19-248)||(8659609-8659838)
chr7 (45-200)||(29577388-29577543)
chr7 (31-200)||(8538330-8538499)
chr7 (30-207)||(27830579-27830756)
chr7 (19-206)||(1301752-1301939)
chr7 (136-254)||(8628772-8628890)
chr7 (31-197)||(8654747-8654913)
chr7 (45-197)||(8602271-8602423)
chr7 (31-254)||(10494079-10494302)
chr7 (76-207)||(6789799-6789930)
chr7 (127-182)||(29581642-29581697)
chr7 (21-242)||(3147524-3147745)
chr7 (137-201)||(8640358-8640422)
chr7 (37-188)||(7877444-7877595)
chr7 (34-200)||(8382584-8382750)
chr7 (131-201)||(8647170-8647240)
chr7 (49-198)||(8590934-8591083)
chr7 (127-206)||(8610205-8610284)
chr7 (121-227)||(8559600-8559706)
[»] chr1 (3 HSPs)
chr1 (1-248)||(34466468-34466715)
chr1 (131-207)||(15595328-15595404)
chr1 (131-206)||(4678363-4678438)
[»] chr4 (3 HSPs)
chr4 (31-254)||(9335596-9335819)
chr4 (131-197)||(35132745-35132811)
chr4 (136-248)||(30775498-30775610)
[»] chr2 (8 HSPs)
chr2 (61-198)||(11999690-11999827)
chr2 (40-206)||(16657231-16657397)
chr2 (19-254)||(16661685-16661920)
chr2 (61-254)||(12245141-12245334)
chr2 (142-254)||(7542466-7542578)
chr2 (131-181)||(43625725-43625775)
chr2 (131-200)||(12234983-12235052)
chr2 (61-254)||(14703648-14703841)
[»] chr8 (2 HSPs)
chr8 (131-248)||(43745095-43745210)
chr8 (77-200)||(12528798-12528921)
[»] chr5 (1 HSPs)
chr5 (19-197)||(28220248-28220426)
[»] chr6 (1 HSPs)
chr6 (144-193)||(28910883-28910932)


Alignment Details
Target: chr7 (Bit Score: 162; Significance: 2e-86; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 17260734 - 17260481
Alignment:
Q  1 ccaatgatttccctcaaatacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  17260734 ccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatctcgtctatggtacttgtgaagatgcgggagattgctgaggtat 17260635  T
Q  101 atctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    |||| |||||| |||| |  |||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17260634 atcttgaatcatcggttattaatgttgttattactgttcctgcttatttcaatgattctcagcgaaaagccaccatagatgctggtgttattgctggcct 17260535  T
Q  201 tgatgttttgaagataacgaatgaaccgattgctgcagctatagcatacggcct 254  Q
    | ||||||||||| |||  |||||||| |||||||||||||| ||||| |||||    
T  17260534 ttatgttttgaagttaattaatgaacctattgctgcagctattgcatatggcct 17260481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 17268432 - 17268179
Alignment:
Q  1 ccaatgatttccctcaaatacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaat 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||  | |||||||||||||||||||||||||    
T  17268432 ccaatgatttccctcaagtacaagggacgggagaaacacttttgtgcagaggaaatttcgtctatggtactcacaaagatgcgggagattgctgaggaat 17268333  T
Q  101 atctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    |||| |||||| |||| |  |||| ||| ||||| || || ||||| ||||| ||||||||||||||||||||||||||||| ||||  |||||||||||    
T  17268332 atctagaatcatcggttatgaatgctgtcattactgtcccggcttacttcaacgattctcagcgaaaagccaccatagatgctggtgtcattgctggcct 17268233  T
Q  201 tgatgttttgaagataacgaatgaaccgattgctgcagctatagcatacggcct 254  Q
    | |||| |||||| |||  |||||||| | |||||||||||| ||||| |||||    
T  17268232 taatgtattgaaggtaatcaatgaaccaactgctgcagctattgcatatggcct 17268179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 47 - 206
Target Start/End: Original strand, 8636064 - 8636223
Alignment:
Q  47 ctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagctta 146  Q
    |||||||||| ||||||||||| ||  | |||||||| ||||||||||||| ||||||||||||| | ||||| ||||  || ||||| ||||| |||||    
T  8636064 ctgaggaaatatcgtctatggtcctgacaaagatgcgagagattgctgaggcatatctggaatcatctgtcaagaatgcagtcattactgtgcccgctta 8636163  T
Q  147 tttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
    |||||||||||||||||| ||| |||||| |||||| ||||| ||||| |||||| ||||    
T  8636164 tttcaatgattctcagcgtaaatccaccaaagatgctggtgccattgccggccttaatgt 8636223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 206
Target Start/End: Complemental strand, 8667882 - 8667707
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| ||||||| |||||||||||| || |||||||| ||| | |||||||| ||| |||| |||| ||||||||  || |||||||| ||||  ||      
T  8667882 gagaagcacttttgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggggtcgccggtcaagaatgccgttg 8667783  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||| ||| ||||    
T  8667782 ttactgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggacttaatgt 8667707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 8671335 - 8671558
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| || |||| |||||||||||| || |||||||| ||| | |||||||| ||| |||| |||| ||||||||| ||||||||||| ||||  ||      
T  8671335 gagaagcaattttgtgctgaggaaatatcttctatggtgcttacaaagatgcgagaggttgcggaggcatatctggagtcaccggtcaagaatgccgttg 8671434  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgat 230  Q
    |||| ||||||||||| |||||||||||||||||||  |||||||| ||||| ||| |||||||||| ||| ||||  |   |||||  |||||||| |     
T  8671435 ttaccgtgccagcttacttcaatgattctcagcgaacggccaccattgatgctggtactattgctggacttaatgtcattcggataatcaatgaacctac 8671534  T
Q  231 tgctgcagctatagcatacggcct 254  Q
    |||||||||||| ||||| |||||    
T  8671535 tgctgcagctattgcatatggcct 8671558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 136 - 254
Target Start/End: Original strand, 8585516 - 8585634
Alignment:
Q  136 gtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctg 235  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||| ||| |||||  |||||||| | |||||    
T  8585516 gtgcctgcttatttcaatgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaatgttatgaggataatcaatgaacccactgctg 8585615  T
Q  236 cagctatagcatacggcct 254  Q
    ||||||| ||||| |||||    
T  8585616 cagctattgcatatggcct 8585634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 201
Target Start/End: Original strand, 13333161 - 13333331
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| ||||||| ||| |||||||| || |||||||| ||| | |||||||| ||| |||| |||| |||| |||  ||||| ||||| ||||  ||      
T  13333161 gagaagcacttttgtgccgaggaaatatcatctatggtccttacaaagatgcgagaggttgcagaggcatatatggggtcaccagtcaagaatgccgttg 13333260  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcctt 201  Q
    |||| ||||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  13333261 ttactgtgccggcttacttcaatgattctcagcgaaaggccaccatagatgctggtgctattgctggcctt 13333331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 248
Target Start/End: Complemental strand, 8659838 - 8659609
Alignment:
Q  19 tacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtca 118  Q
    |||||||| | |||||| ||||||| ||| |||||||| || |||||||||||| | || ||||| ||  |||| |||  ||||||    ||||| || |    
T  8659838 tacaagggtcaggagaagcacttttgtgcggaggaaatatcatctatggtacttacaaaaatgcgagaagttgcagagacatatctaatgtcacctgtga 8659739  T
Q  119 aaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataac 218  Q
    | |||| |||  |||||||||| || || ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||  |  ||||||     
T  8659738 agaatgctgttgttacagtgcctgcatagttcaatgattctcagcgaaaagccaccatagattccggtgccattgctggccttaatgtcattcagataat 8659639  T
Q  219 gaatgaaccgattgctgcagctatagcata 248  Q
     |||||||| | |||||||||||| |||||    
T  8659638 taatgaacctactgctgcagctattgcata 8659609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 45 - 200
Target Start/End: Original strand, 29577388 - 29577543
Alignment:
Q  45 tgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagct 144  Q
    |||||||||||| ||||||||| | ||  | ||||||| ||||||||| ||| ||| | |||| | ||| || || ||||  ||||| ||||||||||||    
T  29577388 tgctgaggaaatatcgtctatgatcctctcaaagatgcaggagattgcagagaaatttttggagttacccgtaaagaatgcagtgatcacagtgccagct 29577487  T
Q  145 tatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    ||||||||||||||||||||||||||||||| |||||||||   ||||||||||||    
T  29577488 tatttcaatgattctcagcgaaaagccaccaaagatgccggcattattgctggcct 29577543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 8538499 - 8538330
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||||||||||| |||||| ||||| ||  ||||||| ||  | |||||||||||| | ||||| | || | |||| ||||| ||||||||||  ||||    
T  8538499 gagaaacacttttttgctgaagaaatatcagctatggtcctcacaaagatgcgggagttcgctgaagtatttttggagtcacctgtcaaaaatgcagtga 8538400  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    ||||||| || ||||||||||||||||| ||||||| |||||||| |||||| ||||  |||||||||||    
T  8538399 ttacagtacctgcttatttcaatgattcacagcgaagagccaccaaagatgctggtgtcattgctggcct 8538330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 27830579 - 27830756
Alignment:
Q  30 ggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtg 129  Q
    |||||||||||| | ||| |||||||| || || ||||| ||| | |||||||| ||||| || |||| |||| || |||||||||| || ||||  ||     
T  27830579 ggagaaacacttatgtgcggaggaaatttcatcaatggtccttacaaagatgcgagagatcgcggaggcatatttgcaatcaccggttaagaatgcagta 27830678  T
Q  130 attacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgtt 207  Q
    || || |||||||||||||||||||| ||||| |||||||||||  ||||| ||||||| |||||||||||| |||||    
T  27830679 ataaccgtgccagcttatttcaatgactctcaacgaaaagccactgtagattccggtgccattgctggccttaatgtt 27830756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 1301939 - 1301752
Alignment:
Q  19 tacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtca 118  Q
    |||||||| | |||||| |||||||  |  |||||||| || |||||||| ||| |||||||||| || ||||| |||  ||||||    ||||| || |    
T  1301939 tacaagggtcaggagaagcacttttgcgtggaggaaatatcatctatggtccttacgaagatgcgagaaattgcagagacatatctaatgtcaccagtga 1301840  T
Q  119 aaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
     ||||| |||  |||| ||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  1301839 caaatgctgttgttactgtgcctgcacatttcaatgattctcagcgaaaagccaccatagatgccggtgcaattgctggccttaatgt 1301752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 8628890 - 8628772
Alignment:
Q  136 gtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctg 235  Q
    ||||| |||||||||||||||||||||||||||||||||||  |||| ||||| |||||||||||| ||||| ||| |||||  ||||| || | |||||    
T  8628890 gtgcctgcttatttcaatgattctcagcgaaaagccaccatgaatgctggtgccattgctggccttaatgttatgaggataatcaatgaccccactgctg 8628791  T
Q  236 cagctatagcatacggcct 254  Q
    ||||||| ||||| |||||    
T  8628790 cagctattgcatatggcct 8628772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 8654913 - 8654747
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| || |||| |||||||||||| || |||  ||| ||| | |||||||| |||||||| |||| ||| || | |||||| ||||||||||| ||      
T  8654913 gagaagcaattttgtgctgaggaaatatcatctgcggttcttacaaagatgcgagagattgcagaggcataccttggatcacccgtcaaaaatgtcgttg 8654814  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctgg 197  Q
    |||| ||||| || || |||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  8654813 ttactgtgccggcatacttcaatgactctcagcgaaaagcaaccatagatgctggtgccattgctgg 8654747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 197
Target Start/End: Complemental strand, 8602423 - 8602271
Alignment:
Q  45 tgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagct 144  Q
    ||||||||||||||| || ||||| ||| | |||||||| || ||||| ||| | | |||||| ||||| ||||| ||||  ||  |||| ||||| |||    
T  8602423 tgctgaggaaatctcatcaatggtccttacaaagatgcgtgaaattgcagagaagtttctggagtcacctgtcaagaatgcagttgttactgtgccggct 8602324  T
Q  145 tatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctgg 197  Q
    ||||| ||||||||||||||||||||||| | |||||| ||||| ||||||||    
T  8602323 tattttaatgattctcagcgaaaagccacaaaagatgctggtgccattgctgg 8602271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 10494079 - 10494302
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| ||||||| ||| |||||||| || |||||||| |||   |||||||| ||| |||| |||| |||| |||  ||||| ||||| |||| |||      
T  10494079 gagaagcacttttgtgccgaggaaatatcatctatggtccttataaagatgcgagaggttgcagaggcatatttggggtcaccagtcaagaatgctgttg 10494178  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgat 230  Q
    |||| ||||| ||||| ||||| |||||||| ||||| || || || ||||| |||||||||||||||||| ||||  |   |||||  |||||||| |     
T  10494179 ttactgtgccggcttacttcaacgattctcaacgaaaggctactattgatgctggtgctattgctggccttaatgtcattcggataatcaatgaacctac 10494278  T
Q  231 tgctgcagctatagcatacggcct 254  Q
    |||||||||||| ||||| |||||    
T  10494279 tgctgcagctattgcatatggcct 10494302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 76 - 207
Target Start/End: Complemental strand, 6789930 - 6789799
Alignment:
Q  76 aagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccacca 175  Q
    ||||||||||||||||||||| ||||| || | |||  | | |||||||  || ||||| ||||| |||||||||||||||||||| || ||||||||      
T  6789930 aagatgcgggagattgctgagaaatatttgcagtcagagataaaaaatgcagttattactgtgcctgcttatttcaatgattctcaacggaaagccactt 6789831  T
Q  176 tagatgccggtgctattgctggccttgatgtt 207  Q
    ||||||| ||||| |||||||| ||| |||||    
T  6789830 tagatgctggtgccattgctggtcttaatgtt 6789799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 29581642 - 29581697
Alignment:
Q  127 gtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgc 182  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  29581642 gtgattaccgtgcctgcttatttcaatgattctcagcgaaaagccaccaaagatgc 29581697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 242
Target Start/End: Complemental strand, 3147745 - 3147524
Alignment:
Q  21 caagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaa 120  Q
    |||||||| |||||| ||| | | |||||| |||||||| |||||||| ||  | ||||||||  ||| ||| ||||| | | | ||||  || |||||     
T  3147745 caagggacaggagaagcacctatgtgctgaagaaatctcatctatggttctaacaaagatgcgcaagactgcagaggagtttttagaattgcctgtcaag 3147646  T
Q  121 aatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacga 220  Q
    ||||  ||  |||| || || ||||||||||||||| ||||||| ||||| || |||||||| |||| ||||||||||||| || || ||  |||||  |    
T  3147645 aatgcagttgttaccgtacctgcttatttcaatgatgctcagcggaaagcgacaatagatgctggtgttattgctggccttaatattatgcggataatca 3147546  T
Q  221 atgaaccgattgctgcagctat 242  Q
    ||||||| | ||||||||||||    
T  3147545 atgaacctactgctgcagctat 3147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 8640358 - 8640422
Alignment:
Q  137 tgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcctt 201  Q
    |||| ||||| |||||||||| ||||| ||||||||||||||||||||| || ||||||||||||    
T  8640358 tgcctgcttacttcaatgattatcagcaaaaagccaccatagatgccggggccattgctggcctt 8640422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 188
Target Start/End: Original strand, 7877444 - 7877595
Alignment:
Q  37 cacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacag 136  Q
    ||||||| ||| |||||||| || || ||| | ||| | |||||||| |||||||| ||| | | | |||| ||||| ||||| ||||  ||  |||| |    
T  7877444 cacttttgtgccgaggaaatatcatccatgatccttacaaagatgcgcgagattgcagagaagtttttggagtcacctgtcaagaatgcagttgttactg 7877543  T
Q  137 tgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgc 188  Q
    |||| |||||||||||||||||||| ||||||||||| | |||||| |||||    
T  7877544 tgccggcttatttcaatgattctcaacgaaaagccacaaaagatgctggtgc 7877595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 200
Target Start/End: Original strand, 8382584 - 8382750
Alignment:
Q  34 aaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgatta 133  Q
    |||||| ||| ||| ||||||||||| |||||||| ||    |||||||| |||||||| ||| | | | |||| |||||  || | ||||| ||  |||    
T  8382584 aaacacctttgtgccgaggaaatctcctctatggtcctcaaaaagatgcgtgagattgcagagaattttttggagtcacctatcgagaatgtagttgtta 8382683  T
Q  134 cagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    | ||||| || ||||||||||||||||| || |||||||| | |||||| ||||| |||||||||||    
T  8382684 ccgtgcctgcatatttcaatgattctcaacggaaagccacaaaagatgctggtgcgattgctggcct 8382750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 201
Target Start/End: Complemental strand, 8647240 - 8647170
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcctt 201  Q
    |||| ||||| || || |||||||||| ||||||||||||||| ||||||||||| || ||||||||||||    
T  8647240 ttactgtgcctgcatacttcaatgattatcagcgaaaagccactatagatgccggggccattgctggcctt 8647170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 198
Target Start/End: Complemental strand, 8591083 - 8590934
Alignment:
Q  49 gaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatt 148  Q
    ||||||||||| || ||||| ||  | |||||||| |||||||||||  | | | |||| ||||| ||||| ||||  ||  |||| |||||||||||||    
T  8591083 gaggaaatctcatccatggttctcacaaagatgcgagagattgctgaaaagtttttggagtcacctgtcaagaatgcagttgttactgtgccagcttatt 8590984  T
Q  149 tcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggc 198  Q
    | |||||||||||| | ||||| |||| |||||| ||||  |||||||||    
T  8590983 ttaatgattctcagaggaaagctaccaaagatgctggtgtcattgctggc 8590934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 8610284 - 8610205
Alignment:
Q  127 gtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
    ||||| || ||||| |||||||| |||||||||||||| |||||||| | |||||| ||||  ||| |||||||| ||||    
T  8610284 gtgatcactgtgcctgcttattttaatgattctcagcggaaagccacaaaagatgctggtgtcatttctggccttaatgt 8610205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 227
Target Start/End: Complemental strand, 8559706 - 8559600
Alignment:
Q  121 aatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacga 220  Q
    |||| ||||||||| || || |||||||| |||||||||||  ||| |||||||| |||||| ||||  |||||||| ||| ||||  || ||||||  |    
T  8559706 aatgctgtgattaccgtacctgcttattttaatgattctcaaagaagagccaccaaagatgcaggtgaaattgctggtcttaatgtaatgcagataatca 8559607  T
Q  221 atgaacc 227  Q
    |||||||    
T  8559606 atgaacc 8559600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 34466468 - 34466715
Alignment:
Q  1 ccaatgatttccctcaaatacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaat 100  Q
    |||||||||||||| || || ||||| | |||||| ||| | | ||||||||||||||| |||||| | ||| | ||||||||||| | ||| |||||||    
T  34466468 ccaatgatttcccttaagtataagggtcaggagaagcacctatgtgctgaggaaatctcatctatgatcctttcaaagatgcgggatactgcagaggaat 34466567  T
Q  101 atctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    || ||||||||||  | || ||||  || || || ||||| |||||||| |||||||||||||||||||| ||  | ||||| ||| |||||||||||||    
T  34466568 atttggaatcaccaattaagaatgcagttatcaccgtgcctgcttattttaatgattctcagcgaaaagctactgtggatgctggtactattgctggcct 34466667  T
Q  201 tgatgttttgaagataacgaatgaaccgattgctgcagctatagcata 248  Q
    | |||||||| | ||||  |||||||| | |||||||||||| |||||    
T  34466668 taatgttttgcaaataatcaatgaacccactgctgcagctattgcata 34466715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 15595404 - 15595328
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgtt 207  Q
    |||| ||||| |||||| ||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| |||||    
T  15595404 ttaccgtgcctgcttatctcaatgattctcaacgaaaagccactatagatgcaggtgccattgctggccttaatgtt 15595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 4678363 - 4678438
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
    |||| ||||| || || |||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||| ||||    
T  4678363 ttactgtgcctgcatacttcaatgattctcaacgaaaagctaccatagatgctggtgccattgctggacttaatgt 4678438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 254
Target Start/End: Original strand, 9335596 - 9335819
Alignment:
Q  31 gagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtga 130  Q
    ||||| ||||||| |||||||||||| || |||||| | ||| | |||||| | ||| |||| |||| |||| |||  || |||||||| ||||  ||      
T  9335596 gagaagcacttttgtgctgaggaaatatcttctatgttgcttacaaagatgagagaggttgcggaggcatatttggggtcgccggtcaagaatgccgttg 9335695  T
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgat 230  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||| |||||||||||||| ||||  |   |||||  |||||||| |     
T  9335696 ttaccgtgccagcttacttcaatgattctcagcgaaaggccaccatagatgctggtactattgctggccttaatgtcattcggataatcaatgaacctac 9335795  T
Q  231 tgctgcagctatagcatacggcct 254  Q
    |||||||||||| ||||| |||||    
T  9335796 tgctgcagctattgcatatggcct 9335819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 35132811 - 35132745
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctgg 197  Q
    |||| ||||| |||||||| | ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  35132811 ttactgtgcctgcttattttagtgattctcaacgaaaagccactatagatgctggtgctattgctgg 35132745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 248
Target Start/End: Complemental strand, 30775610 - 30775498
Alignment:
Q  136 gtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctg 235  Q
    ||||| ||||||||||||||| | |||||||||||||| || ||||| ||||| |||||||| ||| ||||| |||  ||||  ||||| || | ||| |    
T  30775610 gtgcctgcttatttcaatgatgcacagcgaaaagccactatggatgctggtgccattgctggtcttaatgttatgagaataattaatgagcccactgcag 30775511  T
Q  236 cagctatagcata 248  Q
    ||||||| |||||    
T  30775510 cagctattgcata 30775498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 198
Target Start/End: Complemental strand, 11999827 - 11999690
Alignment:
Q  61 tctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctc 160  Q
    |||||||||||  |||||||||| || |||||||||| |||| | ||||||||||| || ||||||||  |||| || ||||||||||| | ||||||||    
T  11999827 tctatggtactaacgaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgttgttgttactgtaccagcttattttagtgattctc 11999728  T
Q  161 agcgaaaagccaccatagatgccggtgctattgctggc 198  Q
    | ||||||||||| |||||||||||||| |||||||||    
T  11999727 aacgaaaagccactatagatgccggtgcaattgctggc 11999690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 40 - 206
Target Start/End: Original strand, 16657231 - 16657397
Alignment:
Q  40 ttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgc 139  Q
    |||| |||||||||||| || |||||| | ||| | |||||||| ||  ||||||||| || | |||| || || ||||| |||| |||  |||| ||||    
T  16657231 ttttgtgctgaggaaatatcatctatgatccttacaaagatgcgagaagttgctgaggcatttatggagtcgcctgtcaagaatgctgttgttactgtgc 16657330  T
Q  140 cagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgt 206  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||||| ||||    
T  16657331 cagcttacttcaatgattcgcagcgaaaagccaccatagatgctggtgccatcgctggccttaatgt 16657397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 19 - 254
Target Start/End: Original strand, 16661685 - 16661920
Alignment:
Q  19 tacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtca 118  Q
    |||||||| | |||||| | | ||| ||| ||||||||||| ||||| || ||  | || |||  |||| |||| ||||  ||| ||||||||||||| |    
T  16661685 tacaagggtcaggagaagctcctttgtgccgaggaaatctcatctattgtcctcacaaacatgaaggaggttgcagaggcttatttggaatcaccggtta 16661784  T
Q  119 aaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataac 218  Q
    ||||||  ||  | || || || |||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||||||| | ||| ||| |||||     
T  16661785 aaaatgcagttgtcactgttcctgcttattttaacgattctcagcgaaaagccaccatggatgctggtgccattgctggccttaacgttgtgaggataat 16661884  T
Q  219 gaatgaaccgattgctgcagctatagcatacggcct 254  Q
     |||||||| | ||| |||||||| ||||| |||||    
T  16661885 caatgaacccactgcagcagctattgcatatggcct 16661920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 254
Target Start/End: Original strand, 12245141 - 12245334
Alignment:
Q  61 tctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctc 160  Q
    |||||||||||  | |||||||| || |||||||||| |||| | ||||||||||| || |||| |||  |||| || || |||||||| | ||||||||    
T  12245141 tctatggtactaacaaagatgcgagaaattgctgaggcatatttagaatcaccggtaaagaatgctgttgttactgtacctgcttattttagtgattctc 12245240  T
Q  161 agcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctgcagctatagcatacggcct 254  Q
    |||||||||| || |||||||| ||  | |||||||| ||  ||||| ||| | ||| ||||||||| | |||||||||| | ||||| |||||    
T  12245241 agcgaaaagcaacgatagatgctggctcaattgctggtctcaatgttatgagggtaatgaatgaacccactgctgcagctgttgcatatggcct 12245334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 254
Target Start/End: Complemental strand, 7542578 - 7542466
Alignment:
Q  142 gcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctgcagcta 241  Q
    |||||||| ||||||||||| ||||||||||| |||||||| ||||| |||||||||||  ||||| ||| |  || ||||||||| | ||| ||||||     
T  7542578 gcttattttaatgattctcaacgaaaagccactatagatgcgggtgccattgctggcctcaatgttatgagggcaatgaatgaacctactgccgcagctg 7542479  T
Q  242 tagcatacggcct 254  Q
    | ||||| |||||    
T  7542478 ttgcatatggcct 7542466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 181
Target Start/End: Complemental strand, 43625775 - 43625725
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatg 181  Q
    |||| ||||| ||||| ||||||||||||||||||||||||||||||||||    
T  43625775 ttaccgtgcctgcttacttcaatgattctcagcgaaaagccaccatagatg 43625725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 12235052 - 12234983
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggcct 200  Q
    |||| ||||| |||||||||||||||||||| |||||||| || |||||||| ||||  |||||||||||    
T  12235052 ttaccgtgcctgcttatttcaatgattctcaacgaaaagcaactatagatgctggtgtcattgctggcct 12234983  T

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Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 254
Target Start/End: Complemental strand, 14703841 - 14703648
Alignment:
Q  61 tctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctc 160  Q
    ||||||||||| | ||||||||| || |||||||||  |||| | || ||| | || || ||||  ||  |||| ||||| |||||||| | ||||||||    
T  14703841 tctatggtactggtgaagatgcgagaaattgctgagacatatttagagtcaactgttaagaatgcagttgttacggtgcctgcttattttagtgattctc 14703742  T
Q  161 agcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgattgctgcagctatagcatacggcct 254  Q
    |  |||||||||| || ||||| |||| |||||| |||||  ||||| ||| | ||| ||||||||| |  ||||||||||| ||||| |||||    
T  14703741 aaagaaaagccactatggatgctggtgttattgccggcctcaatgttatgagggtaatgaatgaacctacagctgcagctattgcatatggcct 14703648  T

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Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 248
Target Start/End: Complemental strand, 43745210 - 43745095
Alignment:
Q  131 ttacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctggccttgatgttttgaagataacgaatgaaccgat 230  Q
    |||| ||||| |||||||||||||||| |||||| ||||||||  ||||||| ||||| |||||||| ||||||||| |||||||||  |||||||| |     
T  43745210 ttactgtgccggcttatttcaatgattatcagcggaaagccac--tagatgctggtgccattgctgggcttgatgttatgaagataatcaatgaacccac 43745113  T
Q  231 tgctgcagctatagcata 248  Q
    |||||||||||| |||||    
T  43745112 tgctgcagctattgcata 43745095  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 200
Target Start/End: Complemental strand, 12528921 - 12528798
Alignment:
Q  77 agatgcgggagattgctgaggaatatctggaatcaccggtcaaaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccat 176  Q
    ||||||| |||||||| || | || ||| || ||||| || || ||||  |||||||| |||||||| |||||||||||||| ||||||  ||||||||     
T  12528921 agatgcgagagattgcagatgcatttcttgagtcacctgttaagaatgcagtgattacggtgccagcgtatttcaatgattcgcagcgacgagccaccaa 12528822  T
Q  177 agatgccggtgctattgctggcct 200  Q
     ||||| ||||  |||||||||||    
T  12528821 ggatgctggtgtcattgctggcct 12528798  T

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Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 197
Target Start/End: Complemental strand, 28220426 - 28220248
Alignment:
Q  19 tacaagggacgggagaaacacttttctgctgaggaaatctcgtctatggtacttgcgaagatgcgggagattgctgaggaatatctggaatcaccggtca 118  Q
    |||||||||| |||||| ||| | | ||| || |||||||| |||||||| ||  | |||||||| |||||||| ||||  | | ||||||  || ||||    
T  28220426 tacaagggacaggagaagcacctatgtgccgaagaaatctcatctatggttctaacaaagatgcgtgagattgcagaggcctttttggaatttcctgtca 28220327  T
Q  119 aaaatgttgtgattacagtgccagcttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattgctgg 197  Q
    | ||||  || ||||| ||||| |||||||||||||||| |||||| ||||||||||||||||| ||| | ||||||||    
T  28220326 agaatgcagttattactgtgcctgcttatttcaatgattatcagcggaaagccaccatagatgcaggtaccattgctgg 28220248  T

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Target: chr6 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 28910932 - 28910883
Alignment:
Q  144 ttatttcaatgattctcagcgaaaagccaccatagatgccggtgctattg 193  Q
    |||||||||||||||| || | ||||||||||||||||| ||||| ||||    
T  28910932 ttatttcaatgattcttagaggaaagccaccatagatgctggtgccattg 28910883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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