View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21131_low_3 (Length: 466)
Name: NF21131_low_3
Description: NF21131
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21131_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 319; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 84 - 454
Target Start/End: Original strand, 43710302 - 43710670
Alignment:
| Q |
84 |
cattaggagaataaggggcatacactgtgagtgtaaattaattttacacttacatcccatgaaagtccattatattgcgccactacagaccattgattta |
183 |
Q |
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| T |
43710302 |
cattaggagaataaggggcatacactttgagtgtaaattaattttacacttacatcccatgaaagtccattatattgcgccactacagaccattgattta |
43710401 |
T |
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| Q |
184 |
agattaagttacaagattcagtccnnnnnnnnnnnnngataagttataagagtgacttaatggactctgattgacttacatacactaaatgtatgactca |
283 |
Q |
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| T |
43710402 |
agattaagttacaagattcagtccaaaaaaaaaaa--gataagttataagagtgacttaatggactctgattgacttacatacactaaatgtatgagtca |
43710499 |
T |
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| Q |
284 |
aagaaaaaagatttacaatgtaagtgtattccatttaaactcattatcttaaccttgaaagcaagggaataaaatgaaacagacaaggaaagaggatgaa |
383 |
Q |
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| T |
43710500 |
aagaaaaaagatttacaatgtaagtgtattccatttaaactcattatcttaaccttgaaagcaagggaataaaatgaaacagacaaggaaagaggatgaa |
43710599 |
T |
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| Q |
384 |
tcgtacgttgtttgattgacatggtgctatcgaactgattaaatacaacaagcctaaatgtcacatctctg |
454 |
Q |
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| T |
43710600 |
tcgtacgttgtttgattgacatggtgctatcgaactgattaaatacaacaagcctaaatgtcacatctctg |
43710670 |
T |
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