View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21133_high_4 (Length: 249)

Name: NF21133_high_4
Description: NF21133
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21133_high_4
NF21133_high_4
[»] chr4 (40 HSPs)
chr4 (5-226)||(8694642-8694862)
chr4 (5-216)||(31274443-31274653)
chr4 (5-216)||(31728323-31728532)
chr4 (5-216)||(37263520-37263730)
chr4 (16-216)||(37258822-37259019)
chr4 (16-216)||(5270380-5270579)
chr4 (16-204)||(55252584-55252772)
chr4 (16-216)||(16421986-16422184)
chr4 (16-216)||(12822867-12823066)
chr4 (16-217)||(2820732-2820931)
chr4 (16-216)||(33467960-33468158)
chr4 (24-216)||(5925761-5925943)
chr4 (16-216)||(13064770-13064966)
chr4 (16-216)||(13060406-13060606)
chr4 (16-213)||(51698867-51699065)
chr4 (5-216)||(31766801-31766998)
chr4 (16-183)||(19107518-19107685)
chr4 (16-216)||(29349164-29349362)
chr4 (16-201)||(32081139-32081321)
chr4 (16-183)||(19102906-19103072)
chr4 (16-217)||(32220526-32220720)
chr4 (16-216)||(33462315-33462510)
chr4 (16-216)||(12875344-12875550)
chr4 (56-216)||(19907269-19907427)
chr4 (24-178)||(27183183-27183326)
chr4 (16-216)||(23094049-23094246)
chr4 (16-183)||(48275829-48275992)
chr4 (16-96)||(19907188-19907268)
chr4 (46-180)||(8029328-8029457)
chr4 (32-111)||(6943740-6943819)
chr4 (24-179)||(40408896-40409046)
chr4 (28-105)||(8028215-8028292)
chr4 (30-216)||(12878856-12879039)
chr4 (135-216)||(6943820-6943901)
chr4 (16-123)||(29985030-29985138)
chr4 (17-101)||(16948941-16949026)
chr4 (19-120)||(47245073-47245174)
chr4 (33-75)||(16958263-16958305)
chr4 (16-59)||(39216186-39216229)
chr4 (216-249)||(36287030-36287063)
[»] chr5 (35 HSPs)
chr5 (5-216)||(26668207-26668417)
chr5 (5-216)||(26939804-26940014)
chr5 (16-216)||(37247756-37247955)
chr5 (16-216)||(6154389-6154588)
chr5 (5-216)||(7452683-7452894)
chr5 (5-216)||(29166930-29167140)
chr5 (5-216)||(37646012-37646224)
chr5 (17-216)||(36424579-36424777)
chr5 (5-216)||(37536894-37537105)
chr5 (17-217)||(36430459-36430656)
chr5 (5-216)||(39519324-39519524)
chr5 (5-220)||(39523963-39524167)
chr5 (16-215)||(12103994-12104183)
chr5 (16-215)||(10759320-10759517)
chr5 (16-217)||(20180111-20180306)
chr5 (16-183)||(35678888-35679054)
chr5 (19-183)||(23689014-23689177)
chr5 (30-113)||(40148797-40148880)
chr5 (74-202)||(23757135-23757262)
chr5 (74-202)||(23822591-23822718)
chr5 (22-183)||(17162802-17162964)
chr5 (16-183)||(4872827-4872988)
chr5 (16-123)||(17159316-17159424)
chr5 (20-118)||(40567656-40567754)
chr5 (49-162)||(6511614-6511726)
chr5 (22-183)||(9725763-9725917)
chr5 (131-217)||(40150249-40150335)
chr5 (16-61)||(6511740-6511785)
chr5 (16-113)||(15149605-15149701)
chr5 (37-107)||(16115294-16115364)
chr5 (16-55)||(22832636-22832675)
chr5 (18-88)||(7088185-7088257)
chr5 (169-216)||(25668156-25668203)
chr5 (16-57)||(2847801-2847841)
chr5 (16-57)||(2859638-2859678)
[»] chr1 (22 HSPs)
chr1 (5-216)||(10136254-10136464)
chr1 (16-216)||(25844696-25844895)
chr1 (6-216)||(26926686-26926886)
chr1 (5-172)||(51040522-51040688)
chr1 (16-214)||(16648591-16648786)
chr1 (16-183)||(16036546-16036712)
chr1 (16-183)||(19797984-19798151)
chr1 (16-183)||(23191829-23191993)
chr1 (22-186)||(38622135-38622298)
chr1 (16-123)||(12260916-12261022)
chr1 (27-183)||(40166891-40167046)
chr1 (16-108)||(11807159-11807251)
chr1 (5-81)||(10141022-10141098)
chr1 (16-123)||(39586130-39586234)
chr1 (26-123)||(39199816-39199917)
chr1 (16-86)||(47450279-47450349)
chr1 (131-216)||(8138646-8138728)
chr1 (131-216)||(5100132-5100216)
chr1 (16-54)||(33300379-33300417)
chr1 (168-217)||(39199732-39199781)
chr1 (16-56)||(46697275-46697315)
chr1 (17-111)||(14906824-14906916)
[»] chr3 (27 HSPs)
chr3 (5-216)||(18472935-18473145)
chr3 (16-216)||(757321-757519)
chr3 (5-216)||(7570172-7570382)
chr3 (16-216)||(18468152-18468351)
chr3 (16-216)||(23660446-23660645)
chr3 (16-216)||(23665078-23665277)
chr3 (16-216)||(20520901-20521100)
chr3 (16-216)||(14437650-14437846)
chr3 (5-200)||(55326706-55326899)
chr3 (5-216)||(27709860-27710067)
chr3 (16-216)||(12970765-12970966)
chr3 (16-216)||(46964953-46965151)
chr3 (16-198)||(12964857-12965040)
chr3 (5-121)||(39774876-39774992)
chr3 (16-183)||(55432167-55432330)
chr3 (16-183)||(3656247-3656413)
chr3 (16-183)||(29351167-29351334)
chr3 (51-216)||(20175368-20175529)
chr3 (132-211)||(32473106-32473185)
chr3 (50-216)||(3426047-3426209)
chr3 (16-123)||(7860646-7860755)
chr3 (16-78)||(12111679-12111741)
chr3 (16-123)||(12565180-12565291)
chr3 (16-123)||(13259579-13259690)
chr3 (29-123)||(2206880-2206970)
chr3 (40-123)||(13149737-13149821)
chr3 (131-183)||(38891170-38891222)
[»] chr6 (27 HSPs)
chr6 (16-216)||(16835118-16835318)
chr6 (5-216)||(17963515-17963725)
chr6 (5-210)||(6406824-6407027)
chr6 (16-214)||(19994344-19994540)
chr6 (16-216)||(11533659-11533857)
chr6 (16-216)||(11559169-11559367)
chr6 (16-216)||(11569650-11569847)
chr6 (16-214)||(20747256-20747453)
chr6 (16-200)||(2699087-2699271)
chr6 (16-199)||(12405334-12405516)
chr6 (24-197)||(17600328-17600497)
chr6 (16-211)||(33686606-33686799)
chr6 (38-211)||(22694347-22694517)
chr6 (20-217)||(11612860-11613055)
chr6 (29-183)||(12797772-12797929)
chr6 (16-180)||(22610451-22610612)
chr6 (16-114)||(5856925-5857023)
chr6 (51-214)||(11428933-11429094)
chr6 (18-183)||(12689911-12690074)
chr6 (16-123)||(25313522-25313631)
chr6 (16-123)||(26201016-26201125)
chr6 (27-179)||(19674724-19674874)
chr6 (16-159)||(17914532-17914675)
chr6 (18-81)||(14509919-14509982)
chr6 (145-223)||(5857028-5857105)
chr6 (144-216)||(29891918-29891991)
chr6 (28-60)||(29891988-29892020)
[»] chr2 (30 HSPs)
chr2 (5-216)||(30651843-30652053)
chr2 (5-216)||(9184374-9184585)
chr2 (5-216)||(9179683-9179894)
chr2 (32-216)||(18345372-18345555)
chr2 (5-216)||(17974308-17974518)
chr2 (5-216)||(19891464-19891672)
chr2 (16-217)||(17967920-17968120)
chr2 (16-216)||(12797869-12798069)
chr2 (16-216)||(25496341-25496540)
chr2 (16-216)||(29678618-29678817)
chr2 (16-219)||(25477243-25477445)
chr2 (16-216)||(24536973-24537179)
chr2 (18-216)||(12361191-12361384)
chr2 (29-214)||(19896903-19897085)
chr2 (16-216)||(1933966-1934147)
chr2 (53-214)||(20101609-20101769)
chr2 (16-123)||(40846631-40846738)
chr2 (16-183)||(42925666-42925830)
chr2 (31-183)||(31329017-31329168)
chr2 (31-183)||(31335738-31335889)
chr2 (16-113)||(25637824-25637920)
chr2 (16-113)||(15446341-15446439)
chr2 (28-172)||(44630448-44630592)
chr2 (16-183)||(28604026-28604191)
chr2 (18-183)||(32080318-32080484)
chr2 (16-95)||(34495183-34495262)
chr2 (157-216)||(40846478-40846537)
chr2 (16-117)||(12001954-12002061)
chr2 (22-123)||(7735474-7735576)
chr2 (18-100)||(7712114-7712198)
[»] chr7 (33 HSPs)
chr7 (16-218)||(4931163-4931364)
chr7 (5-216)||(26342136-26342344)
chr7 (16-216)||(12256962-12257160)
chr7 (16-222)||(21672145-21672349)
chr7 (16-217)||(3880908-3881111)
chr7 (27-217)||(3046525-3046713)
chr7 (16-186)||(42625565-42625739)
chr7 (22-123)||(12181801-12181902)
chr7 (16-216)||(10392044-10392246)
chr7 (16-183)||(26286146-26286314)
chr7 (67-208)||(44508261-44508401)
chr7 (18-123)||(13313363-13313468)
chr7 (29-178)||(23247554-23247701)
chr7 (80-212)||(2595774-2595905)
chr7 (16-90)||(12800330-12800404)
chr7 (16-123)||(9814924-9815032)
chr7 (93-216)||(12802300-12802421)
chr7 (31-123)||(4580420-4580512)
chr7 (16-106)||(10716866-10716957)
chr7 (16-88)||(8269240-8269312)
chr7 (56-176)||(23151683-23151804)
chr7 (23-120)||(15973668-15973767)
chr7 (16-86)||(6590099-6590169)
chr7 (34-111)||(10387410-10387488)
chr7 (16-90)||(16373288-16373362)
chr7 (52-183)||(30259238-30259368)
chr7 (16-112)||(27246608-27246702)
chr7 (29-74)||(44508427-44508472)
chr7 (16-63)||(23152177-23152224)
chr7 (133-173)||(10387346-10387386)
chr7 (27-79)||(15643788-15643840)
chr7 (131-163)||(8269362-8269394)
chr7 (16-60)||(30259021-30259065)
[»] chr8 (28 HSPs)
chr8 (16-216)||(40124851-40125050)
chr8 (16-202)||(38181253-38181438)
chr8 (16-217)||(1808391-1808590)
chr8 (16-213)||(15950528-15950731)
chr8 (16-217)||(28559073-28559272)
chr8 (16-208)||(26780044-26780234)
chr8 (16-216)||(44924878-44925077)
chr8 (16-202)||(2966525-2966710)
chr8 (16-213)||(28564258-28564451)
chr8 (21-216)||(1909904-1910099)
chr8 (18-201)||(18875357-18875539)
chr8 (5-123)||(33417459-33417577)
chr8 (27-216)||(7002594-7002783)
chr8 (63-163)||(17021243-17021341)
chr8 (63-163)||(17551680-17551778)
chr8 (18-76)||(23547700-23547758)
chr8 (165-216)||(33417599-33417650)
chr8 (16-71)||(17027081-17027136)
chr8 (16-71)||(17557573-17557628)
chr8 (27-156)||(17953164-17953290)
chr8 (27-117)||(24672374-24672464)
chr8 (156-216)||(17027165-17027225)
chr8 (156-216)||(17557657-17557717)
chr8 (48-102)||(31440200-31440254)
chr8 (29-112)||(33100541-33100623)
chr8 (21-110)||(28859335-28859422)
chr8 (16-61)||(22714109-22714154)
chr8 (140-216)||(23547568-23547644)
[»] scaffold0352 (1 HSPs)
scaffold0352 (5-221)||(8037-8253)
[»] scaffold0002 (3 HSPs)
scaffold0002 (16-216)||(5004-5203)
scaffold0002 (16-217)||(442896-443095)
scaffold0002 (40-123)||(155181-155265)
[»] scaffold0054 (2 HSPs)
scaffold0054 (16-213)||(30117-30313)
scaffold0054 (28-183)||(26393-26547)
[»] scaffold0690 (1 HSPs)
scaffold0690 (16-216)||(6172-6372)
[»] scaffold0240 (1 HSPs)
scaffold0240 (16-216)||(4911-5108)
[»] scaffold0057 (1 HSPs)
scaffold0057 (16-213)||(36062-36257)
[»] scaffold0011 (1 HSPs)
scaffold0011 (53-183)||(64885-65013)
[»] scaffold0595 (1 HSPs)
scaffold0595 (27-71)||(3904-3948)


Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 8694642 - 8694862
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8694642 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 8694741  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8694742 gtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatc 8694840  T
Q  205 aatgttccaacataaactgagg 226  Q
    ||||||||||||||| ||||||    
T  8694841 aatgttccaacataatctgagg 8694862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 31274443 - 31274653
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31274443 tctcgaataaaataataattactattatttttatcactgtcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 31274542  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    | |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  31274543 gcgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatc 31274641  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  31274642 aatgttccaaca 31274653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 31728532 - 31728323
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31728532 tctcgaataaaataataattactattatttttatcattatgaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 31728433  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||| ||||||||||||       |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31728432 gtggga-ccccacactcta-ttttttcaattcacacaacattagatcaaattataattacttggtgtttaatcttccaatttttcatccaacatcacatc 31728335  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  31728334 aatgttccaaca 31728323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 37263730 - 37263520
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37263730 tctcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 37263631  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    | |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  37263630 gcgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatcaaacatcacatc 37263532  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  37263531 aatgttccaaca 37263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 37259019 - 37258822
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37259019 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 37258920  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37258919 acactcta-ttttttcaattcacacaacattagatcaaag--taattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 37258823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 5270579 - 5270380
Alignment:
Q  16 ataataattactattatttttatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  5270579 ataataactactattatttttatcattatcaaagtatttaaaattaaataccacaatttaaatactactaatgtgtgtgttctattttatgtgggacccc 5270480  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
     ||| ||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5270479 -acattctatttttt-caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 5270382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 204
Target Start/End: Original strand, 55252584 - 55252772
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  55252584 ataataattgctattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccacc 55252683  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    ||||||||       ||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  55252684 acactctatttttttcaattcacacaacattaaatcaaagtataattacttgatgtttagtcttccaatttttcatccaacatcacatc 55252772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 16421986 - 16422184
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  16421986 ataataattactattatttttatcattatcaagtattgaaaattaaataccgcaatttaaacactactaatgcgtgtgttctattttatgtgggaccccc 16422085  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||||||||| ||||||||||||    
T  16422086 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcaca-caatgttccaac 16422183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 12823066 - 12822867
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||    
T  12823066 ataataattactattatttttatcattataaagtatttaaaattaaataccacagtttaaacactactaatgtgtgagttctattttatgtgggaccccc 12822967  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |  ||||||||||||  |||||||||||    
T  12822966 acactcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttgatcttccaatttattttccaacatcacactaatgttccaac 12822868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 2820732 - 2820931
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2820732 ataataattactattatttttatcattatcaaataattaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 2820831  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||| | |||||| ||||| ||||||||||||    
T  2820832 acactcta-atttttcaattcacacaacactagatcaaa-tataattacttggtgtttaatcttccaattttccttccaacttcacaccaatgttccaac 2820929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 33468158 - 33467960
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||  ||     
T  33468158 ataataattactattatttttatcattatcaagtatttaaaattaaatactacaatttaaacactactaatgtgtgtgttctattttatgtggga-acct 33468060  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||  |||||||||||    
T  33468059 acactcta-ttttttcaatttacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcttccaacatcacactaatgttccaac 33467961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 24 - 216
Target Start/End: Complemental strand, 5925943 - 5925761
Alignment:
Q  24 tactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||   | |     
T  5925943 tactattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaatgtg--tgttctattttatgtgggacccccatttttt- 5925847  T
Q  124 nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
           ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5925846 -------caattcacacaacattatatcaaagtataattacttggtatttaatcttccaatttttcatccaacatcacatcaatgttccaaca 5925761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 13064966 - 13064770
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||    
T  13064966 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactattgatgtgtgtgttctattttatgtgggaccccc 13064867  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||   ||||||||||||||||||||||| ||||| |||| | |||||||||||| |||||||||||| ||||||||||||    
T  13064866 acactcta-ttttttcaattca---aacattagatcaaagtataattacttggtatttatttttccaatttttcttccaacatcacaccaatgttccaac 13064771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 13060406 - 13060606
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||| ||||||||| |||| ||    
T  13060406 ataagaattactattattgttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgagttcttttttatgtgtgaccacc 13060505  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| |  | ||||||||||  |||||||||||    
T  13060506 acactctatttttttcaattcacacaatattagatcaaagtataattacttggggtttaatcttccaatttatttttcaacatcacactaatgttccaac 13060605  T
Q  216 a 216  Q
    |    
T  13060606 a 13060606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 51698867 - 51699065
Alignment:
Q  16 ataataattactattatttt--tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    ||||||||||||||| ||||  ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  51698867 ataataattactattttttttttatcattatcaagcatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccc 51698966  T
Q  114 ccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    ||||||||||       |||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||| |  |||||||||| |  |||||||||    
T  51698967 ccacactcta-ttttttcaattcacgcaacattagttcaaagtataattatttggtgtttaatctttcaatttattttccaacatcaaactaatgttcca 51699065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 31766801 - 31766998
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtttgttctatttta 103  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  31766801 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaaattaaataccacaattt-aacactattaatgtgtgtgttctatttta 31766899  T
Q  104 tgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    ||||||||||||||| ||||       ||||||||| |||||||||||||||||             ||||||||| |||||||||||||||||||||||    
T  31766900 tgtgggacccccacaatctatttttttcaattcaca-aacattagatcaaagta-------------tttaatctttcaatttttcatccaacatcacat 31766985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 19107518 - 19107685
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||    
T  19107518 ataataattattattattttcatcattatcaggtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 19107617  T
Q  116 acactctannnnnnncaattcacacaaca-ttagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||| | |||||||||||| |||| | |||||||||||||||||||    
T  19107618 acactcta-tattttcaattcacacaatacttagatcaaagtttaataacttggtgtttaatcttccaa 19107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 29349362 - 29349164
Alignment:
Q  16 ataataattactattattttt-atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||||||||| |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||||  |||||||||||||||||| ||     
T  29349362 ataataattaatattattttttatcattatccagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgagttctattttatgtggga-cct 29349264  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    |||||||||       |||||||| ||||| || ||||||||||||||| || ||||||||||||||| |||| | |||||||||||| |||||||||||    
T  29349263 cacactcta-ttttttcaattcactcaacacta-atcaaagtataattacttagtgtttaatcttccagttttccttccaacatcacaccaatgttccaa 29349166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 32081321 - 32081139
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| |||||||| ||    
T  32081321 ataataattactattatttttataattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgagttctattttacgtgggacctcc 32081222  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagt-tggtgtttaatcttccaatttttcatccaacatcac 201  Q
    ||||||||       ||||||||   |||||||||||||||||||||| | |  |||||||||||||||||| |  |||||||||||    
T  32081221 acactcta-ttttttcaattcac---acattagatcaaagtataattactattatgtttaatcttccaatttattttccaacatcac 32081139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 19102906 - 19103072
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||| |||||||| ||||||||||||||||||||| ||    
T  19102906 ataataattattattattttcatcattatcaggtatttaaaattaaatatcactatttaaacactattaatgtgtgtgttctattttatgtgggacctcc 19103005  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| ||||||||||| |||| | |||| ||||||||||||||    
T  19103006 acactcta-ttttttcaattcacacaacactagatcaaagtttaataacttggagtttaatcttccaa 19103072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 32220720 - 32220526
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32220720 ataataattactattatttttatcattatcaaatatttaaaattaaatatcggaatttaaacactaataatgtgtatgttctattttatgtgggaccccc 32220621  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatcc-aacatcacatcaatgttccaa 214  Q
    ||||||||        ||||||||||| ||||||||||| ||||||||        |||||||| ||||||||| ||| ||||| | |||||||||||||    
T  32220620 acactctattttttt-aattcacacaatattagatcaaaatataatta-------cttaatctttcaatttttcttcctaacattatatcaatgttccaa 32220529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 33462510 - 33462315
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||  |||  |||||||| ||||||| ||    
T  33462510 ataataattactattatttttatcattatcaagtatttaaaattaaacactgcaatttaaacactactaatgtg--tgtcttattttat-tgggacctcc 33462414  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||||||||||||| |||||||| ||||||||||||  | ||||||||| || ||||| |||  |||||||||||    
T  33462413 acactcta-ttttttcaattcacacaacattagatcaaa-tataattatttggtgtttaattattcaatttttcttcgaacattacactaatgttccaac 33462316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 12875344 - 12875550
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||||| | |||||||||||  |||||||||||||  ||||||||    
T  12875344 ataataattactattatgtttatcattatcaaatatttaaaatcaaataccactatttaaatattactaatgtgtgggttctattttatgcaggaccccc 12875443  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttca-------tccaacatcacatcaatg 208  Q
    ||||||||       |||||||||||||| ||||| ||||| |||||| |||||||||||||||| || ||| ||       |||||||||||| |||||    
T  12875444 acactcta-ttttttcaattcacacaacactagatgaaagtctaattacttggtgtttaatcttctaactttccaatttccttccaacatcacaccaatg 12875542  T
Q  209 ttccaaca 216  Q
    ||||||||    
T  12875543 ttccaaca 12875550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 56 - 216
Target Start/End: Original strand, 19907269 - 19907427
Alignment:
Q  56 aattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaag 155  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||| ||||| ||       |||||||||||||| |||||||||     
T  19907269 aattaaataccgcaatttaaacactgctaatgtgtgtgttctattttatgtgagacccc-acactttatttttt-caattcacacaacactagatcaaaa 19907366  T
Q  156 tataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  19907367 tataattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgttccaaca 19907427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 178
Target Start/End: Original strand, 27183183 - 27183326
Alignment:
Q  24 tactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||           
T  27183183 tactattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaatgtg--tgttctattttatgtgggaccccca------- 27183273  T
Q  124 nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatct 178  Q
           ||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  27183274 --tttttcaattcacacaacattatatcaaagtataattacttggtatttaatct 27183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 23094049 - 23094246
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |  ||||||| |||||||||||||| |||| ||||||||||||   ||||    
T  23094049 ataataattactattatttttatcattatcaagtatttaaaattaaatctcgtaatttaatcactactaatgtgtgtgttttattttatgtgg--acccc 23094146  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    || |||||       ||||||| |  ||||||| ||||| | |||||  ||||||||||||||| ||||||||  || ||| ||||||||||||||||||    
T  23094147 actctcta-ttttttcaattcatatcacattagctcaaattctaattccttggtgtttaatctttcaattttttttctaacttcacatcaatgttccaac 23094245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 48275992 - 48275829
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| |||||||| |||||||||||| |||||||||| ||||||||||| |||  |||| |||| |||||||| | ||||||||    
T  48275992 ataataattattattattttcatcattattaagtatttaaaaataaataccactatttaaacactgcta--gtgtgtgttatattttatat-ggaccccc 48275896  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       ||||||||||||||  |||||||||| |||| | ||| |||||||||||||||    
T  48275895 acactcta-ttttttcaattcacacaacacaagatcaaagtttaataacttgatgtttaatcttccaa 48275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 19907188 - 19907268
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttc 96  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  19907188 ataataatttctattatttttatcatcatcaagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgtgttc 19907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 8029457 - 8029328
Alignment:
Q  46 aagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacat 145  Q
    ||||||||||||||||||||||| || ||||||||     ||||| ||||||||||||||||||||||||||||||||       |||||||||||| |     
T  8029457 aagtatttaaaattaaataccactatgtaaacactg----tgtgtgtgttctattttatgtgggacccccacactctatttttt-caattcacacaatac 8029363  T
Q  146 tagatcaaagtataattagttggtgtttaatcttc 180  Q
    ||||||||||| |||||| ||||||||||||||||    
T  8029362 tagatcaaagtttaattacttggtgtttaatcttc 8029328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 6943740 - 6943819
Alignment:
Q  32 tttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggac 111  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||| ||||||||| | ||||||||||||||||||||    
T  6943740 tttttatcattatcaagtatttgaaattaaatacagcaatttaaacattactaatgtatgtgttctattttatgtgggac 6943819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 179
Target Start/End: Original strand, 40408896 - 40409046
Alignment:
Q  24 tactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    |||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||| |||| ||| ||||||||||||| ||| | ||||||||| |     
T  40408896 tactattatttttaccat-atcaaatatttaaaattaaataccgcaatttaaacactaataatatgtgtgttctattttatttggta-ccccacactat- 40408992  T
Q  124 nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatctt 179  Q
            |||||| ||||||||||||||||||||||| | || ||||||||||||    
T  40408993 --ttttttaattcatacaacattagatcaaagtataatcatttagtgtttaatctt 40409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 105
Target Start/End: Complemental strand, 8028292 - 8028215
Alignment:
Q  28 attatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatg 105  Q
    ||||||||||||||||| |  ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  8028292 attatttttatcattattagttatttaaaattaaatacaactatttaaacactactaatgtgtgtgttctattttatg 8028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 12878856 - 12879039
Alignment:
Q  30 tatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnn 129  Q
    ||||||||||||||||||||||||| ||| ||||| ||  |||||||||||| |||||||| ||||||||||||||||||| || |  ||||||          
T  12878856 tatttttatcattatcaagtatttataat-aaatatcattatttaaacactattaatgtgtatgttctattttatgtgggatcctcttactcta-ttttt 12878953  T
Q  130 ncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
     |||||||||||||| ||||| ||||| || ||| || |||||||||||| |||  |||| |||||| ||||| ||| |||| ||||    
T  12878954 tcaattcacacaacactagatgaaagtctatttacttagtgtttaatctttcaa-ctttcttccaacttcacaacaacgttctaaca 12879039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 6943820 - 6943901
Alignment:
Q  135 tcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||||| || ||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||  |||||| |||||    
T  6943820 tcacacaacagtaaatcaaagtataattacttgatgtttaatcttccaatttttcttccaacatcacactaatgttgcaaca 6943901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 29985138 - 29985030
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||||||||||||| |||||||||||||||  ||| | |||| |||||||| ||| | |||||||||||||| |||||| ||||||||| |||||||  |    
T  29985138 ataataattactatcatttttatcattatcgggtactaaaaaattaaatacaacattgtaaacactactaatttgtttgctctattttacgtgggacatc 29985039  T
Q  115 cacactcta 123  Q
    |||||||||    
T  29985038 cacactcta 29985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 16948941 - 16949026
Alignment:
Q  17 taataattactattatttt-tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattt 101  Q
    |||||||||||||| |||| ||||||||||||||||| |||| ||||||| | ||||| |||||||||||| ||| ||||||||||    
T  16948941 taataattactattcttttttatcattatcaagtattcaaaactaaatacaagaatttgaacactactaatatgtgtgttctattt 16949026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 47245073 - 47245174
Alignment:
Q  19 ataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccaca 118  Q
    |||||||  |||||||| |||| |||||  |||||||||||||||| | | |||||||||||| |||||||| ||||||||||||| | ||| |||||||    
T  47245073 ataattataattattttcatcaatatcagttatttaaaattaaatatcgctatttaaacactaataatgtgtgtgttctattttatttaggatccccaca 47245172  T
Q  119 ct 120  Q
    ||    
T  47245173 ct 47245174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 16958263 - 16958305
Alignment:
Q  33 ttttatcattatcaagtatttaaaattaaataccacaatttaa 75  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  16958263 ttttatcattatgaagtatttaaaattaaatacaacaatttaa 16958305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39216229 - 39216186
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaatt 59  Q
    ||||||||||| |||||||||||||||||||| |||| ||||||    
T  39216229 ataataattacgattatttttatcattatcaaatattaaaaatt 39216186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 36287063 - 36287030
Alignment:
Q  216 ataaactgaggtggataatgacggttaggaagta 249  Q
    |||||||||||||||||||||| |||||||||||    
T  36287063 ataaactgaggtggataatgactgttaggaagta 36287030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 170; Significance: 2e-91; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 26668207 - 26668417
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26668207 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 26668306  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26668307 gtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatc 26668405  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  26668406 aatgttccaaca 26668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 26939804 - 26940014
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26939804 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 26939903  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26939904 gtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatc 26940002  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  26940003 aatgttccaaca 26940014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 37247955 - 37247756
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  37247955 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 37247856  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37247855 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 37247757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 6154588 - 6154389
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6154588 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 6154489  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  6154488 acactcta-ttttttcaattcacacaacattagatcaaaatataattacttgatgtttaattttccaatttttcatccaacatcacatcaatgttccaac 6154390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 7452683 - 7452894
Alignment:
Q  5 tctcgaagaatataataattactatta-tttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctatttta 103  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7452683 tctcgaataaaataataattactattaatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatttta 7452782  T
Q  104 tgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    ||||||||||||||||||||       |||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  7452783 tgtgggacccccacactcta-ttttttcaattcacacaacattagatcagagtataattactttgtgtttaatcttccaatttttcatccaacatcacat 7452881  T
Q  204 caatgttccaaca 216  Q
    |||||||||||||    
T  7452882 caatgttccaaca 7452894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 29167140 - 29166930
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  29167140 tctcgaataaaataataattactattgtttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 29167041  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    || |||||| |||||||||       ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29167040 gtaggaccctcacactcta-ttttttcaattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatc 29166942  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  29166941 aatgttccaaca 29166930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 37646224 - 37646012
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactacta--atgtgtttgttctatttt 102  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||||||    
T  37646224 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataatatgtgtgtgttctatttt 37646125  T
Q  103 atgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcaca 202  Q
    |||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||    
T  37646124 atgtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatcaagcatcaca 37646026  T
Q  203 tcaatgttccaaca 216  Q
    ||||||||||||||    
T  37646025 tcaatgttccaaca 37646012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 216
Target Start/End: Original strand, 36424579 - 36424777
Alignment:
Q  17 taataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccca 116  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||    
T  36424579 taataattaatattatttttatcattaccaagtatttaaaattaaataccacaatttaagcactactaatgtgtgtgttctattttatgtgagaccccca 36424678  T
Q  117 cactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||       |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36424679 cactcta-ttttttcaattcacacaacattagatcatagtataattacttggtgtttaatcttccaattttttatccaacatcacatcaatgttccaaca 36424777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 37537105 - 37536894
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactacta--atgtgtttgttctatttt 102  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||    
T  37537105 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgtgttctatttt 37537006  T
Q  103 atgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcaca 202  Q
    |||||||| ||||||||||||       ||||||||||||||||| ||||||||||||||| ||| |||||||||||| ||||||||||| | |||||||    
T  37537005 atgtggga-ccccacactcta-ttttttcaattcacacaacattatatcaaagtataattacttgatgtttaatcttctaatttttcatcaagcatcaca 37536908  T
Q  203 tcaatgttccaaca 216  Q
    ||||||||||||||    
T  37536907 tcaatgttccaaca 37536894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 217
Target Start/End: Original strand, 36430459 - 36430656
Alignment:
Q  17 taataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccca 116  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  36430459 taataattactattatttttatcattaccaaatatttaaaattaaataccataatttaaacactactaatgtgtgtgttctattttatgtgggaccccca 36430558  T
Q  117 cactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||       |||||||||||||||||||| ||| ||||||||   | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  36430559 cactcta-ttttttcaattcacacaacattagattaaaatataatta--cgatatttaatcttccaatttttcatccaacatcacatcaatgttccaaca 36430655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 39519324 - 39519524
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          ||||| |||||||||||||    
T  39519324 tctcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaa----------tgtgtgtgttctattttat 39519413  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    | |||||||||||||||||       ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39519414 gcgggacccccacactctatttttt-caattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatc 39519512  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  39519513 aatgttccaaca 39519524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 39523963 - 39524167
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||          ||||| |||||||||||||    
T  39523963 tctcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaa----------tgtgtgtgttctattttat 39524052  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |  ||||||||||||||||       ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||    
T  39524053 gctggacccccacactctatttttt-caattcacacaacattagatcaaagtatatttatttggtgtttaatctttcaatttttcatccaacatcacatc 39524151  T
Q  205 aatgttccaacataaa 220  Q
    ||||||||||||||||    
T  39524152 aatgttccaacataaa 39524167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 215
Target Start/End: Original strand, 12103994 - 12104183
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  12103994 ataataactactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttccattttatgtgggaccccc 12104093  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    || ||||          ||| ||||||||||||||||||||||||||| ||||||||| |||||| |||||||| ||||||||||||  |||||||||||    
T  12104094 actctct----------atttacacaacattagatcaaagtataattacttggtgtttcatcttctaatttttcttccaacatcacactaatgttccaac 12104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 10759517 - 10759320
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||     
T  10759517 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtctgttctattttatgtgggacccct 10759418  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||        |||||||||||||||| |||||| |||||||| || ||||||||||||||||||| |  ||||||||||||  |||||||||||    
T  10759417 acactctattttttt-aattcacacaacattaaatcaaaatataattactt-gtgtttaatcttccaatttattttccaacatcacactaatgttccaac 10759320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 20180306 - 20180111
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||   |||    
T  20180306 ataataattactattatttttatcattatcaa---tttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtggg--tccc 20180212  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    |||  |||       |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||  ||| ||||||| ||||||||||||    
T  20180211 acatccta-ttttctcaattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttttctaccagcatcacaccaatgttccaac 20180113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 35679054 - 35678888
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||| | ||||||||  |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |      
T  35679054 ataataataattattatttgcatcattatcaggtatttaaaataaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggactctt 35678955  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| ||||||||||| |||||| ||| |||||||||||||||    
T  35678954 acactcta-ttttttcaattcacacaacactagatcaaagtttaattacttgatgtttaatcttccaa 35678888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 23689014 - 23689177
Alignment:
Q  19 ataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccaca 118  Q
    ||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||| |||||||    
T  23689014 ataattactattatttttaccattataaggtatttaaaattaaataccacaattttaacactacgaatgtgtgtgttctattttatgtgggatccccaca 23689113  T
Q  119 ctctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||| |       |||| |||| | || ||||||||||| |||||  |||||||||||||||||||    
T  23689114 ctc-aattttttcaatccacaaatcactagatcaaagtctaattgtttggtgtttaatcttccaa 23689177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 40148797 - 40148880
Alignment:
Q  30 tatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40148797 tatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtttgttctattttatgtgggaccc 40148880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 23757262 - 23757135
Alignment:
Q  74 aaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgttt 173  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||       ||||||||||||||||| ||| ||||||||||| |||||||||    
T  23757262 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctatttttt-caattcacacaacattaaatctaagtataattacttggtgttt 23757164  T
Q  174 aatcttccaatttttcatccaacatcaca 202  Q
    |||||||||||||||| ||||||||||||    
T  23757163 aatcttccaatttttcttccaacatcaca 23757135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 202
Target Start/End: Complemental strand, 23822718 - 23822591
Alignment:
Q  74 aaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgttt 173  Q
    |||||||| |||||||| ||||||||||| ||||||||||||||||||||       ||||||||||||||||| ||| ||||||||||| |||||||||    
T  23822718 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctatttttt-caattcacacaacattaaatctaagtataattacttggtgttt 23822620  T
Q  174 aatcttccaatttttcatccaacatcaca 202  Q
    |||||||||||||||| ||||||||||||    
T  23822619 aatcttccaatttttcttccaacatcaca 23822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 17162802 - 17162964
Alignment:
Q  22 attactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacact 120  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||| |||||| |    
T  17162802 attactattatttttatcattatcaggtatttaaaaattaaatacctcaatttaaacaccactaatgtgtgtgttctattttatgtgggactcccacatt 17162901  T
Q  121 ctannnnnnncaattcacacaacattagatcaaagtataatt-agttggtgtttaatcttccaa 183  Q
    |||       ||||||| |||||||||||||| | | ||||| | |||||||||| ||||||||    
T  17162902 cta-ttttttcaattcatacaacattagatcataatctaattaacttggtgtttagtcttccaa 17162964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 4872827 - 4872988
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| ||||||     ||||||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||| ||| ||||||    
T  4872827 ataataattattattattttcatcatt-----gtatttaaaattaaatatcactatttaaacactactattgtgtgtgttctattttatatggaaccccc 4872921  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| || |||||||| |||| | |||||||||||||||||||    
T  4872922 acactcta-ttttttcaattcacacaacactaaatcaaagtttaataatttggtgtttaatcttccaa 4872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 17159316 - 17159424
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| | |||||||||||||||||| ||    
T  17159316 ataatcattactattatttttatcattatcaggtatttaaaaattaaatacctcaattaaaacactactaatgtgtgtcttctattttatgtgggacacc 17159415  T
Q  115 cacactcta 123  Q
    |||| ||||    
T  17159416 cacattcta 17159424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 40567754 - 40567656
Alignment:
Q  20 taattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccaca 118  Q
    ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||| ||| |||||||||    
T  40567754 taattactattatttttatcattataagatatttaaaattaaataccacaatttaatcactactaacgtgtgtgttttattttatatggtacccccaca 40567656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 162
Target Start/End: Complemental strand, 6511726 - 6511614
Alignment:
Q  49 tatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattag 148  Q
    |||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||       ||||||||||||||||||    
T  6511726 tatttaaaattaaatactgcaatttaaacactactaatgtgtgagttctattttatgtgggactcccacact-taattttttcaattcacacaacattag 6511628  T
Q  149 atcaaagtataatt 162  Q
    |||||| |||||||    
T  6511627 atcaaaatataatt 6511614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 9725917 - 9725763
Alignment:
Q  22 attactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactc 121  Q
    |||| |||||| || |||||||||  ||||||||||||||||||||| |||||||||||       ||| ||||||||||||||||||||  ||||||||    
T  9725917 attattattatcttcatcattatccggtatttaaaattaaataccactatttaaacact-------tgtgtgttctattttatgtgggacatccacactc 9725825  T
Q  122 tannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||       |||||||||||||| || |||||||| |||| | |||||||||||||||||||    
T  9725824 tatttttttcaattcacacaacactatatcaaagtttaataacttggtgtttaatcttccaa 9725763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 40150249 - 40150335
Alignment:
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacat 217  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  | ||||||||||  |||||||||||||    
T  40150249 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttatttttcaacatcacactaatgttccaacat 40150335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 6511785 - 6511740
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaa 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  6511785 ataataattactattatttttatcattatcaagtatttaaaattaa 6511740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 15149605 - 15149701
Alignment:
Q  16 ataataattactattatttttatcattatcaagtat-ttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    |||||||||||||||||||||||||||||||  ||| | ||||||||||| |  ||||||||||||| |||||||  ||||||||||||| | ||||||    
T  15149605 ataataattactattatttttatcattatcagatatctaaaaattaaatatcttaatttaaacactattaatgtg--tgttctattttatataggaccc 15149701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 107
Target Start/End: Complemental strand, 16115364 - 16115294
Alignment:
Q  37 atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtg 107  Q
    ||||||| |||||||||||||||||| |||  |||||||||| ||||||||||| ||||  ||||||||||    
T  16115364 atcattagcaagtatttaaaattaaacaccgtaatttaaacattactaatgtgtgtgtttcattttatgtg 16115294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22832675 - 22832636
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  22832675 ataataattactattatttttaacattatcaagtatttaa 22832636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 7088185 - 7088257
Alignment:
Q  18 aataattactattatttttatcattatcaagtattt--aaaattaaataccacaatttaaacactactaatgt 88  Q
    |||||||||||||||||| ||||||||  |||||||  ||||| |||||||||||| |||||| | |||||||    
T  7088185 aataattactattattttcatcattattgagtattttaaaaatcaaataccacaatataaacattgctaatgt 7088257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 25668203 - 25668156
Alignment:
Q  169 tgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||||||||||||||||| |||||||  ||| |||||||||||||    
T  25668203 tgtttaatcttccaatttttcttccaacacaacaccaatgttccaaca 25668156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2847841 - 2847801
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa 57  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  2847841 ataataattactattatttt-atcaatatcaagtatttaaaa 2847801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 2859678 - 2859638
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa 57  Q
    |||||||||||||||||||| |||| ||||||||||||||||    
T  2859678 ataataattactattatttt-atcaatatcaagtatttaaaa 2859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 2e-91; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 10136254 - 10136464
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10136254 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 10136353  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10136354 gtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatc 10136452  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  10136453 aatgttccaaca 10136464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 25844696 - 25844895
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  25844696 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 25844795  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25844796 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 25844894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 216
Target Start/End: Complemental strand, 26926886 - 26926686
Alignment:
Q  6 ctcgaagaatataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaa-cactactaatgtgtttgttctatttta 103  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  26926886 ctcgaataaaataataattactattatttttatcattatcaagtatttaaaaattaaataccacaatttaaaacactactaatgtgtgtgttctatttta 26926787  T
Q  104 tgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    ||||||| |||   |||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26926786 tgtgggatccc---act---------tcaattcacacaacattaaatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 26926699  T
Q  204 caatgttccaaca 216  Q
    |||||||||||||    
T  26926698 caatgttccaaca 26926686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 51040688 - 51040522
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||    
T  51040688 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataacacaatttaaacactactaatgtgtgtgttctatttcat 51040589  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtt 172  Q
    ||||||| |||||||| ||       ||||||||||||||||||||||||||||||||| ||||||||    
T  51040588 gtgggactcccacacttta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtt 51040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 16648786 - 16648591
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16648786 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 16648687  T
Q  116 -acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
     ||||||||       ||||| |||||||||||||||||||||||||||    ||||||||||||| ||||| |  ||||| ||||||  ||||||||||    
T  16648686 tacactcta-ttttttcaatttacacaacattagatcaaagtataatta---cgtgtttaatcttctaatttattttccaaaatcacactaatgttccaa 16648591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 16036546 - 16036712
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||| | ||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||    
T  16036546 ataataataattattattttcatcattatcaggtatttaaatttaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 16036645  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  16036646 acactcta-ttttttcaattcacacaacactagatcaaagtttagttacttggtgtttaatcttccaa 16036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 19798151 - 19797984
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||   |||||||||||||||||||||||    
T  19798151 ataattattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgcgagttctattttatgtgggaccccc 19798052  T
Q  116 -acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
     ||||| ||       |||||||||||||||||||||||| |||||||| ||||| |||||| ||||||    
T  19798051 cacactttatttttttcaattcacacaacattagatcaaa-tataattacttggtatttaattttccaa 19797984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 23191993 - 23191829
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||| | |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||  |||||||    
T  23191993 ataataataattattatttttatcattatcaggtatttaaaattaaataccactacttaaacactactaatgtgtgtgttctattttatgt--gaccccc 23191896  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| ||||||||||| |||| | |||||||||||||||||||    
T  23191895 acactcta-ttttttcaattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 23191829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 22 - 186
Target Start/End: Original strand, 38622135 - 38622298
Alignment:
Q  22 attactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactc 121  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||  || |||||||||||||||| |||  ||||||||||||||||||| |||||||||    
T  38622135 attactattatttttatcattatcaagtattcaaaatcaaatactgcattttaaacactactaatatgtgagttctattttatgtgggactcccacactc 38622234  T
Q  122 tannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaattt 186  Q
    ||       ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||    
T  38622235 ta-ttttttcaattcacacaacattagatcaaagtataattacttgatttttaatcttccaattt 38622298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 12260916 - 12261022
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||| ||||    
T  12260916 ataataattactattatttttatcattatcaagtatttaaaattaaataccactatttaaacactactaatgagtgtgttctattttatgtggga-cccc 12261014  T
Q  116 acactcta 123  Q
    ||||||||    
T  12261015 acactcta 12261022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 40166891 - 40167046
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannn 126  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||||| | ||||||||||| ||||||||| ||| ||||       
T  40166891 tattatttttatcattatcaggtatttaaaattaaataccactgtttaaacactactgatgtgtgtcttctattttatttgggacccctacattcta-tt 40166989  T
Q  127 nnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
        |||||||||||| | ||||||||||| |||| | |||||||||||||||||||    
T  40166990 ttttcaattcacacaatactagatcaaagtttaataacttggtgtttaatcttccaa 40167046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 11807159 - 11807251
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgg 108  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  11807159 ataataattaatattgtttttatcattatcaagtatttaaatttaaataccacaatttaaacactgctaatgtgtgtgttctattttatgtgg 11807251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 10141022 - 10141098
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacacta 81  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10141022 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacacta 10141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 39586234 - 39586130
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||||| || |||  ||||||||||||||||||||||||| ||    
T  39586234 ataataattattattatttttatcattatcaggtatttaaaattaaatatcactatttaaaca-tattaa--tgtttgttctattttatgtgggacctcc 39586138  T
Q  116 acactcta 123  Q
    ||||||||    
T  39586137 acactcta 39586130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 39199917 - 39199816
Alignment:
Q  26 ctattatttttatcattatcaagtatttaaaattaaataccacaatttaa----acactactaatgtgtttgttctattttatgtgggacccccacactc 121  Q
    ||||||||||||||||||| |||||||||||| |||||||  ||||||||    |||||| |||||||| ||||||||||||||||||||| ||||||||    
T  39199917 ctattatttttatcattattaagtatttaaaagtaaatactgcaatttaaacacacactattaatgtgtgtgttctattttatgtgggacctccacactc 39199818  T
Q  122 ta 123  Q
    ||    
T  39199817 ta 39199816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 47450349 - 47450279
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaat 86  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||    
T  47450349 ataataataattattatttttatcattatcaagtatttaaaattaaataacgcagtttaaacactactaat 47450279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 8138646 - 8138728
Alignment:
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||||||| |||| ||||||||||||||| ||    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  8138646 caattcacacaatattatatcaaagtataattactta---tttaatcttccaatttttcttccaagatcacatcaatgttccaaca 8138728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 5100216 - 5100132
Alignment:
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||||| |||||||||| |||||||||||| ||| |||||||||||||||||| |  ||||||||||||  |||||| |||||    
T  5100216 caattcacataacattagattaaagtataattacttg-tgtttaatcttccaatttattttccaacatcacactaatgttacaaca 5100132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 33300417 - 33300379
Alignment:
Q  16 ataataattactattatttttatcattatcaagtattta 54  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33300417 ataataattactattatttttatcattatcaagtattta 33300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 39199781 - 39199732
Alignment:
Q  168 gtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacat 217  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||    
T  39199781 gtgtttaatcttccaatttttcttcccacatcacaccaatgttccaacat 39199732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 46697275 - 46697315
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaa 56  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  46697275 ataataattactattatttttatcattttcaagtatttaaa 46697315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 14906824 - 14906916
Alignment:
Q  17 taataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggac 111  Q
    |||| |||||||| ||||||||||||||  | ||||||||| | |||| |||||| |||||| || |||||||  |||| |||||||| ||||||    
T  14906824 taatcattactatcatttttatcattattgattatttaaaaattaatatcacaatataaacaatattaatgtg--tgttatattttatatgggac 14906916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 6e-89; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 18472935 - 18473145
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18472935 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 18473034  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  18473035 gtgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattactttgtgtttaatcttccaatttttcatccaacatcacatc 18473133  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  18473134 aatgttccaaca 18473145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 757519 - 757321
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  757519 ataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagaccccc 757421  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  757420 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 757322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 7570382 - 7570172
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  7570382 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttat 7570283  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    | |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||     
T  7570282 gcgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatt 7570184  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  7570183 aatgttccaaca 7570172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 18468152 - 18468351
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||    
T  18468152 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatattatgt-agaccccc 18468250  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18468251 acactctatttttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 18468350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 23660645 - 23660446
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| | ||    
T  23660645 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttttattttatgtgggagctcc 23660546  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23660545 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 23660447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 23665277 - 23665078
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | ||    
T  23665277 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatatgggagctcc 23665178  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23665177 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 23665079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 20520901 - 20521100
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||    
T  20520901 ataataattactattatttttatcattatcaagtatttaaagttaaataccgcaatttaaacactactaatgtgtgtattctattttatgtgggaccccc 20521000  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||||    
T  20521001 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaac 20521099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 14437846 - 14437650
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||    
T  14437846 ataataattattattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacctcc 14437747  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14437746 acactcta-ttttttcaattcacacaac---agatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 14437651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 55326706 - 55326899
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  55326706 tctcgaataaaataataactactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 55326805  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatca 200  Q
    |||||||||||||||| ||       |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  55326806 gtgggacccccacactata-ttttttcaattcacacaacattagatcaaa-tataattacttggtgtttaatcttccaatttttcatccaacatca 55326899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 27709860 - 27710067
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||    
T  27709860 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaa--cgtatgttctattttat 27709957  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacatt-agatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    |||||| ||||||||||||       |||||||||||||||| | |||||||||||| || ||||||||||||||||||||||||||| |||||||||||    
T  27709958 gtggga-ccccacactcta-ttttttcaattcacacaacattaaaatcaaagtataa-tacttggtgtttaatcttccaatttttcattcaacatcacat 27710054  T
Q  204 caatgttccaaca 216  Q
    |||||||||||||    
T  27710055 caatgttccaaca 27710067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 12970966 - 12970765
Alignment:
Q  16 ataataattactattattttt-atcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||| |     
T  12970966 ataataattactattattttttatcattatccagtattttaaaattaaataccgcaatttaaacactactaaagtgtgtgttctattttatgtgggatca 12970867  T
Q  114 ccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    ||||||| ||       ||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  12970866 ccacacttta-ttttttcaattcacacaacattaaatcaacgtataattacttggtgtttaatcttccgatttttcatccaacatcatatcaatgttcca 12970768  T
Q  214 aca 216  Q
    |||    
T  12970767 aca 12970765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 46964953 - 46965151
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||  ||||||||||||||||| ||| |    
T  46964953 ataattattattattatttttatcattatcaagtatttaaaattaaataccgcagtttaaacacta-taatgtgtgagttctattttatgtggggccctc 46965051  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||||| |||  |||||||||||    
T  46965052 acactcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacattacactaatgttccaac 46965150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 12965040 - 12964857
Alignment:
Q  16 ataataattactattatttttatcattatcaagta-tttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| || | |||| |||||||||||||||| |    
T  12965040 ataataattactattatttttatcattatcaaatattttaaaattaaataccgcaatttaaacactactaaagtttgtgtt-tattttatgtgggaccac 12964942  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatc-ttccaatttttcatccaacat 198  Q
    |||||||||       |||||||  |||||||| ||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  12964941 cacactctatttttttcaattcatgcaacattaaatcaaagtataattacttggtgtttaatcattctaatttttcatccaacat 12964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 39774992 - 39774876
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  39774992 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttat 39774893  T
Q  105 gtgggacccccacactc 121  Q
    |||  | ||||||||||    
T  39774892 gtgaaatccccacactc 39774876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 55432167 - 55432330
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  55432167 ataataattaatataatttttatcattatcaaatatttaaaattaaatactgcaatttaaacactactaatgtg--tgttctattttgtgtgggaccccc 55432264  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||| ||       ||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  55432265 acacttta-ttttttcaattcacacagcattagatcaaa-tataattacttggtgtttaatcttccaa 55432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 3656413 - 3656247
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||| | ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||     
T  3656413 ataataataattattattttcatcattatcaggtatttaaaattaaataccactatttaaacactactaatgtccgtgttctattttatgtgggacccct 3656314  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||| ||||       |||||||||||||| || |||||||| |||||| |||||||||||||||||||    
T  3656313 acattcta-ttttttcaattcacacaacactaaatcaaagtttaattacttggtgtttaatcttccaa 3656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 29351167 - 29351334
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| ||||||||||  |||||||||||||||||||| |||||||||||| |||||||| |||| |||||||||||||||| ||    
T  29351167 ataataattattattattttcatcattatcagatatttaaaattaaataccactatttaaacactaataatgtgtgtgttttattttatgtgggacctcc 29351266  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    || || ||       |||||||||||||| | ||||||||| |||| | |||||||||||||||||||    
T  29351267 acgctttatttttttcaattcacacaacactggatcaaagtttaataaattggtgtttaatcttccaa 29351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 216
Target Start/End: Original strand, 20175368 - 20175529
Alignment:
Q  51 tttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagat 150  Q
    |||||||||||||||  ||||||||| |||||||||||||  |||||||||||||||| ||||| ||||||||       ||||| ||||||||||||||    
T  20175368 tttaaaattaaatactgcaatttaaatactactaatgtgt--gttctattttatgtggaacccc-acactctatttttt-caattaacacaacattagat 20175463  T
Q  151 caaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||||||||| ||||||||||||||| |||||| |  ||||||||||||  ||||||||||||    
T  20175464 caaagtataattacttggtgtttaatctttcaatttattttccaacatcacactaatgttccaaca 20175529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 32473185 - 32473106
Alignment:
Q  132 aattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 211  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  32473185 aattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaatatcacatcaatgttc 32473106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 216
Target Start/End: Original strand, 3426047 - 3426209
Alignment:
Q  50 atttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattaga 149  Q
    |||||||||| |||||| || ||||||||||||||||||||  |||||||||||||||| ||||||||| ||||        |||||||||||||| |||    
T  3426047 atttaaaattgaataccgcagtttaaacactactaatgtgtgagttctattttatgtggtacccccacattctatttt----aattcacacaacataaga 3426142  T
Q  150 tcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    | |||||||||||| |||||||||||||||  ||||| |  ||||||||||||  ||||||||||||    
T  3426143 ttaaagtataattacttggtgtttaatctttaaatttattttccaacatcacactaatgttccaaca 3426209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 123
Target Start/End: Original strand, 7860646 - 7860755
Alignment:
Q  16 ataataattactattattttt-atcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    ||||||| ||||||| ||||| |||||||| |  ||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||     
T  7860646 ataataaatactatttttttttatcattataagatatttaaaaattaaataccataatttaaacactattaatgtgtgtgttctattttatgtgggacct 7860745  T
Q  114 ccacactcta 123  Q
    ||||||||||    
T  7860746 ccacactcta 7860755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 12111741 - 12111679
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaaca 78  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  12111741 ataataattactattatttttatcattatcaagcatttaaaattaaataccgaaatttaaaca 12111679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 12565291 - 12565180
Alignment:
Q  16 ataataattactattattttt---atcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggac 111  Q
    |||||||||||||||||||||   |||||||||| |||||||||| || |||| || |||||||| ||||||||||| | |||| |||||||| ||||||    
T  12565291 ataataattactattattttttttatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggac 12565192  T
Q  112 ccccacactcta 123  Q
    || |||||||||    
T  12565191 cctcacactcta 12565180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 13259690 - 13259579
Alignment:
Q  16 ataataattactattattttt---atcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggac 111  Q
    |||||||||||||||||||||   |||||||||| |||||||||| || |||| || |||||||| ||||||||||| | |||| |||||||| ||||||    
T  13259690 ataataattactattattttttttatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggac 13259591  T
Q  112 ccccacactcta 123  Q
    || |||||||||    
T  13259590 cctcacactcta 13259579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 2206970 - 2206880
Alignment:
Q  29 ttatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    ||||||| ||||||||||  ||| |||||||||||||  | |||||||||||||| |||    |||||||||||||||||| |||||||||||||    
T  2206970 ttattttcatcattatcagatatgtaaaattaaatactgctatttaaacactactgatg----tgttctattttatgtgggtcccccacactcta 2206880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 13149821 - 13149737
Alignment:
Q  40 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||| |||| | | ||||||||||| ||||| || |||||||||    
T  13149821 attatcaggtatttaaaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactcta 13149737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 38891170 - 38891222
Alignment:
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||||||||||    
T  38891170 caattcacaaaacattagatcaaagtttaattactcggtgtttaatcttccaa 38891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 2e-85; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 16835318 - 16835118
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16835318 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 16835219  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||        |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16835218 acactctattttttttaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 16835119  T
Q  216 a 216  Q
    |    
T  16835118 a 16835118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 17963725 - 17963515
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17963725 tctcgaataaaataacaattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 17963626  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||||||       ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  17963625 gtgggacccccacactcta-ttttttcaattcacacatcattagatcaaagtatagttacttggtgtttaatcttccaatttttcatccaacatcacatc 17963527  T
Q  205 aatgttccaaca 216  Q
    ||||||| ||||    
T  17963526 aatgttcaaaca 17963515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 5 - 210
Target Start/End: Complemental strand, 6407027 - 6406824
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6407027 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 6406928  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |  ||||||||||||||||       |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||| || |||    
T  6406927 gcaggacccccacactcta-ttttttcaattcacacaacaatagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacagca-atc 6406830  T
Q  205 aatgtt 210  Q
    ||||||    
T  6406829 aatgtt 6406824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 19994540 - 19994344
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||    
T  19994540 ataataattactattatttttatcataatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttacgtgggaccccc 19994441  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    ||||||||        |||||||| |||||| ||| ||||||||||||  | |||||||||||||||||||||| |||||||||||| ||||| |||||    
T  19994440 acactctatttttt--aattcacataacattcgattaaagtataattacctagtgtttaatcttccaatttttcttccaacatcacaccaatgatccaa 19994344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 11533857 - 11533659
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  11533857 ataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtggga-cccc 11533759  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||| ||       |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |  ||||||||||||  |||||||||||    
T  11533758 acacttta-ttttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaac 11533660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 11559367 - 11559169
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||||    
T  11559367 ataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtggga-cccc 11559269  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||| ||       |||||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |  ||||||||||||  |||||||||||    
T  11559268 acactgta-ttttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaac 11559170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 11569847 - 11569650
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  11569847 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacacttccaatgtgtgtgttctattttatgtggga-cccc 11569749  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |  | ||||||||||  |||||||||||    
T  11569748 acactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttctaatttat-ttgcaacatcacactaatgttccaac 11569651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 16 - 214
Target Start/End: Complemental strand, 20747453 - 20747256
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||| ||||||||    
T  20747453 ataataattactattgtttttatcgttatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtaagttctattttatgtaggaccccc 20747354  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    ||||||||       ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| | || ||| | ||| |||||||||||    
T  20747353 acactcta-ttttttcaattcacacaacattaaatcaaagtataattacttgatgtttaatcttccaattttccttcaaacttaacaccaatgttccaa 20747256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 2699271 - 2699087
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||||||||||    
T  2699271 ataataattactattatttttattattatctagtatttaaaattaaataccgcaatttaaacactactaatgtgtgaattctattttatgtgggaccccc 2699172  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatca 200  Q
    ||||||||       | |||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |  ||||||||||    
T  2699171 acactctatattttaccattcacacaacattagattaaagtataattacttgatgtttaatcttccaatttattttccaacatca 2699087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 12405516 - 12405334
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| || || | ||    
T  12405516 ataataattactattatttttatcattatcaagtatttaaaattaagtacctcaatttaatcactactaatgtgtgtgttctattttatttgtgatctcc 12405417  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatc 199  Q
    ||||||||        |||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  12405416 acactctattttttt-aattaacacaacattagatcaaaatataattagttgatgtttaatcttccaatttttcttccaacatc 12405334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 197
Target Start/End: Original strand, 17600328 - 17600497
Alignment:
Q  24 tactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||   |||||||| | |||||||||||||||||||||| |||||||||    
T  17600328 tactgttatttttatcattatcaattatttaaaattaaataccacaatttaaac---actaatgtttgtgttctattttatgtgggaccctcacactcta 17600424  T
Q  124 nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaaca 197  Q
           |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  17600425 -ttttttcaattcacacaacattagatcaaagtatgattacttggtgtttaatcttccaatttttcttccaaca 17600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 33686799 - 33686606
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||| |||  ||| |||||||||| ||| ||||    
T  33686799 ataataattactattatttttatcattaccaagtatttaaaactaaataccacagtttaaacactactaatttgtaagttttattttatgt-ggaacccc 33686701  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 211  Q
    ||||||||       |||||||||||| |||||||||||||||||||| ||| |||||||||||||||||| |  ||||||||||||| |||||||    
T  33686700 acactcta-ttttttcaattcacacaaaattagatcaaagtataattatttgatgtttaatcttccaatttattttccaacatcacattaatgttc 33686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 22694517 - 22694347
Alignment:
Q  38 tcattatcaagtatttaaaattaaataccacaatttaaacactacta-atgtgtttgttctattttatgtgggacccccacactctannnnnnncaattc 136  Q
    |||||||||||| |||| ||||||||||  ||||||||||||| ||| |||||| ||||||||||||||||||||| ||| ||| |        ||||||    
T  22694517 tcattatcaagtttttataattaaatacggcaatttaaacact-ctagatgtgtgtgttctattttatgtgggacctccaaactat---tttttcaattc 22694422  T
Q  137 acacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttc 211  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22694421 acacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaatgttc 22694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 217
Target Start/End: Complemental strand, 11613055 - 11612860
Alignment:
Q  20 taattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacac 119  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||| | ||||    
T  11613055 taatcactattatttttatcattatcaagtatttaaaattaaataccgaaatttaaacactactaatgtgtgtgttttattttatgtgggacctcaacac 11612956  T
Q  120 tctannnnnnncaattcacacaacattagatc--aaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacat 217  Q
    ||||       ||||| | | |||||||||||  |||||||||||| ||  |||||||| || ||||||| | |||||||||||  ||||||||||||||    
T  11612955 tcta-ttttttcaatttatataacattagatcaaaaagtataattactt-atgtttaatttttcaattttccttccaacatcac--caatgttccaacat 11612860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 12797929 - 12797772
Alignment:
Q  29 ttatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttg----ttctattttatgtgggacccccacactctan 124  Q
    ||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||| ||    |||||||||||||||||||| |||||||||     
T  12797929 ttatttttatcgttgtcaagtatttaaaattaaataccactatttaaacactactagtgtgtgtgtgttttctattttatgtgggacccacacactcta- 12797831  T
Q  125 nnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
          |||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  12797830 ttttttcaattcacacaacactagatcaaagtctaattacttggtgtttaatcttccaa 12797772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 22610451 - 22610612
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||| ||  ||    
T  22610451 ataataattacaattatttttatcattatcaagtatttaaaattaaataccaaaatttaaacactactaatgtgtgtgttttattttatgtggaactgcc 22610550  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttc 180  Q
    ||| ||||       ||||  |||||||| ||||||||||| |||||| ||||| ||||||||||    
T  22610551 acaatcta-ttttttcaat--acacaacaatagatcaaagtctaattacttggtatttaatcttc 22610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 5856925 - 5857023
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  5856925 ataacaattactattatttttatcattatcaattatttaaaattaaataccgcaatttaaacactactaatgtgtatgttctagtttatgtgggacccc 5857023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 214
Target Start/End: Original strand, 11428933 - 11429094
Alignment:
Q  51 tttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagat 150  Q
    |||||||||||| ||| || |||||| ||||| ||||||| || ||||||| |||||||||||||||||||||       |||||||| |||||||||||    
T  11428933 tttaaaattaaa-accgcagtttaaatactacaaatgtgtgtgctctatttaatgtgggacccccacactctatttttt-caattcacgcaacattagat 11429030  T
Q  151 caaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    |||||||||||||  |||||||||||||||||||||||||||||| |  |||||||||||||||    
T  11429031 caaagtataattatctggtgtttaatcttccaatttttcatccaaaagtacatcaatgttccaa 11429094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 12689911 - 12690074
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccac 117  Q
    |||||||| ||||||||| |||| |||||  |||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||| | ||||    
T  12689911 aataattattattattttcatcaatatcagttatttaaaattaaataccgctatttaaacactactaatgtgtgtgttctattttatgtggga-ctccac 12690009  T
Q  118 actctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||       |||||||||||||| ||||||||||| |||| | |||||||||||| ||||||    
T  12690010 actcta-ttttttcaattcacacaacactagatcaaagtttaataatttggtgtttaattttccaa 12690074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 25313631 - 25313522
Alignment:
Q  16 ataataattactattattttt--atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||| |||||    
T  25313631 ataataattactattatttttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgaccc 25313532  T
Q  114 ccacactcta 123  Q
     |||||||||    
T  25313531 gcacactcta 25313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 26201125 - 26201016
Alignment:
Q  16 ataataattactattattttt--atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||| | | |||||||||||||||| |||||    
T  26201125 ataataattactattatttttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgaccc 26201026  T
Q  114 ccacactcta 123  Q
     |||||||||    
T  26201025 gcacactcta 26201016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 19674724 - 19674874
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannn 126  Q
    ||||||||| |||||||| | ||||||||||||||||| ||  |||||||||||||| |||||| ||||||||||||||| |||||||||||  |||       
T  19674724 tattattttcatcattattaggtatttaaaattaaatatcattatttaaacactactgatgtgtgtgttctattttatgtcggacccccaca--ctattt 19674821  T
Q  127 nnnncaattcacacaacattagatcaaagtataattagttggtgtttaatctt 179  Q
        |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  19674822 tttccaattcacacaacactagatcaaagtttaattatttggtgtttaatctt 19674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 17914532 - 17914675
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||||  |||| |||||||| |||||||| ||||| ||||||||| ||||| |     
T  17914532 ataataattgctattatttttatcatcatcaggtatttaaaattaaataccgtaattaaaacactattaatgtgtgtgttccattttatgtaggacctca 17914631  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtata 159  Q
    ||||||||        |||| |||||||||||||||||||||||    
T  17914632 acactctattttttttaatttacacaacattagatcaaagtata 17914675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 14509919 - 14509982
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacacta 81  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  14509919 aataattactattatttttattattattaagtatttaaaattaaataccacaatttaaacacta 14509982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 223
Target Start/End: Original strand, 5857028 - 5857105
Alignment:
Q  145 ttagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacataaactg 223  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||||| | ||||||    
T  5857028 ttaggtcaaagtataatta-ttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaatagaaactg 5857105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 29891991 - 29891918
Alignment:
Q  144 attagatcaaagtataattagttggtgtttaatcttccaat-ttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||||||||| ||||| || ||||||||||||||||| ||||| | |||||||||| |||||||| ||||    
T  29891991 attagatcaaagtacaattactttgtgtttaatcttccaattttttctttcaacatcacaccaatgttctaaca 29891918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 29892020 - 29891988
Alignment:
Q  28 attatttttatcattatcaagtatttaaaatta 60  Q
    ||||||||||||||||| |||||||||||||||    
T  29892020 attatttttatcattattaagtatttaaaatta 29891988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 30651843 - 30652053
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30651843 tctcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 30651942  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    | |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  30651943 gcgggacccccacactcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatc 30652041  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  30652042 aatgttccaaca 30652053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 9184585 - 9184374
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9184585 tctcgaataaaataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttat 9184487  T
Q  105 gtgggacccccacactcta-nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    |||||||||||||||||||        |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  9184486 gtgggacccccacactctattttttttcaattcacacaacattagatcaaagtttaattatttggtgtttaatcttccaatttttcatccaacatcacat 9184387  T
Q  204 caatgttccaaca 216  Q
    |||||||||||||    
T  9184386 caatgttccaaca 9184374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 9179894 - 9179683
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9179894 tctcgaataaaataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttat 9179796  T
Q  105 gtgggacccccacactcta-nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  9179795 gtgggacccccacactctattttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaccatcacat 9179696  T
Q  204 caatgttccaaca 216  Q
    |||| ||||||||    
T  9179695 caatattccaaca 9179683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 18345372 - 18345555
Alignment:
Q  32 tttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnnc 131  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||            
T  18345372 tttttatcattattaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttt- 18345470  T
Q  132 aattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18345471 aattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 18345555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 17974518 - 17974308
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctatttta 103  Q
    ||||||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17974518 tctcgaataaaataataattacaattatttttatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatttta 17974419  T
Q  104 tgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    ||||||| | ||||||||||       ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  17974418 tgtggga-caccacactcta-ttttttcaattcacacaacattagatcaaagtataattatttgatgtttaatcttccaatttttcatccaacatcacat 17974321  T
Q  204 caatgttccaaca 216  Q
    |||||||||||||    
T  17974320 caatgttccaaca 17974308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 216
Target Start/End: Complemental strand, 19891672 - 19891464
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  19891672 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataatgtg--tgttctattttat 19891575  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    ||||||| |||||| ||||       |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  19891574 gtgggactcccacattcta-ttttttcaattcacacaagattagatcaaagtataattacatggtgtttaatcttccaatttttcatccaacatcacatc 19891476  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  19891475 aatgttccaaca 19891464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 17968120 - 17967920
Alignment:
Q  16 ataataattactattatttttatcattatcaa-gtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||    
T  17968120 ataataattactattatttttatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgtggga-ccc 17968022  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    |||||||||        |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17968021 cacactctattttttt-aattcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 17967923  T
Q  215 cat 217  Q
    |||    
T  17967922 cat 17967920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 12797869 - 12798069
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacc-cc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  12797869 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 12797968  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    |||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||  ||| ||||||    
T  12797969 cacactcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcttccaacatcacactaatattccaa 12798067  T
Q  215 ca 216  Q
    ||    
T  12798068 ca 12798069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 25496540 - 25496341
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  25496540 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 25496441  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||  |||||| ||||    
T  25496440 acactcta-ttttttcaattcacacaatattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacatcacacaaatgttacaac 25496342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 29678618 - 29678817
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||     
T  29678618 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccct 29678717  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       |||||||||||||||||||||||| |||||||  || || ||||||||||||||||||| ||||||||||||  |||||| ||||    
T  29678718 acactcta-ttttttcaattcacacaacattagatcaaaatataattccttagtatttaatcttccaatttttcttccaacatcacactaatgttgcaac 29678816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 219
Target Start/End: Complemental strand, 25477445 - 25477243
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||| ||    
T  25477445 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtaagaccacc 25477346  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||        ||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||| |  | ||||||||||  |||||||||||    
T  25477345 acactctattttttt-aattcgcacaacattaaatcaaagtataattatttgatgtttaatcttccaatttatttttcaacatcacactaatgttccaac 25477247  T
Q  216 ataa 219  Q
    ||||    
T  25477246 ataa 25477243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 24537179 - 24536973
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||| | |||| |||||||||||||||||||    
T  24537179 ataataattactattatttttatcattatcaagtatttaaaattaaataccgtagtttaaacactactaatgtatgtgttatattttatgtgggaccccc 24537080  T
Q  116 acactctannnnnnncaattcacac-------aacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatg 208  Q
    ||||||||       ||||||||||       ||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||| ||| |||||    
T  24537079 acactcta-ttttttcaattcacacaacattaaacattagatcaaagaatgattaattggtgtttaatcttccaatttttcttccaacataacaccaatg 24536981  T
Q  209 ttccaaca 216  Q
    ||||||||    
T  24536980 ttccaaca 24536973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 12361191 - 12361384
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccac 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| |  |||||    
T  12361191 aataattactattatttttatcattatcaattatttaaaattaaataccacaatttaaacactactaatgtg--tcttctattttatgtggaa--cccac 12361286  T
Q  118 actctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    | ||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||| ||||  ||||||||||||    
T  12361287 attcta-ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacaccacactaatgttccaaca 12361384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 29 - 214
Target Start/End: Original strand, 19896903 - 19897085
Alignment:
Q  29 ttatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnn 128  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||| |||||         
T  19896903 ttatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtg--tgttctattttatgtgggacccccacgctcta-tttt 19896999  T
Q  129 nncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
      ||||||||||||||||| |||||| |||||||| ||| | |||||||||||| ||| || |||||||||| | |||||||||||    
T  19897000 ttcaattcacacaacattatatcaaaatataattacttgatatttaatcttccattttctcttccaacatcataccaatgttccaa 19897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 1934147 - 1933966
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||                  || ||||||||||||||||||||| ||    
T  1934147 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaa------------------gtgtgttctattttatgtgggacctcc 1934066  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
     |||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1934065 ccactctatttttt-caattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 1933967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 20101769 - 20101609
Alignment:
Q  53 taaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatca 152  Q
    |||||||||||||   |||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||||       ||||||||||||||||||||||    
T  20101769 taaaattaaatacagtaatttaaatactactaatgtgtatgttctattttatgtggaaccccgacactctatttttt-caattcacacaacattagatca 20101671  T
Q  153 aagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||| ||||||    
T  20101670 aagtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaattttccaa 20101609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 40846738 - 40846631
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  40846738 ataaaaattactattatttttattattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggatcccc 40846639  T
Q  116 acactcta 123  Q
    ||||||||    
T  40846638 acactcta 40846631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 42925830 - 42925666
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||||||||||  |||||||||||| |||||||| ||    
T  42925830 ataataattattattattttcatcattatcaggtatttaaaattaaatatcactatttaaacactactaatgtg--tgttctattttacgtgggacctcc 42925733  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    ||||||||       |||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  42925732 acactcta-ttttttcaattcacacaacactagatcaaagtttaattacttggtgtttaatcttccaa 42925666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 31329017 - 31329168
Alignment:
Q  31 atttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnn 130  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||           
T  31329017 attttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactcta-tttttt 31329115  T
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    |||||||||||||| ||||||||||| |||| | |||||||||||||||||||    
T  31329116 caattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 31 - 183
Target Start/End: Original strand, 31335738 - 31335889
Alignment:
Q  31 atttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnn 130  Q
    ||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||           
T  31335738 attttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactcta-tttttt 31335836  T
Q  131 caattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    |||||||||||||| ||||||||||| |||| | |||||||||||||||||||    
T  31335837 caattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31335889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 25637920 - 25637824
Alignment:
Q  16 ataataattactattatttttatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||  ||||||||||||||||||||||    
T  25637920 ataataattactattatttttatcattatcaagtatttaaaaattaaataccgcagtttaaacactactaatgtg--tgttctattttatgtgggaccc 25637824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 15446439 - 15446341
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccc 113  Q
    |||||||||| || || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  15446439 ataataattattactacttttaccattatcaagtatttaaaaattaaataccacaatttaaacactactaatgtatgtgttctattttatgtgggaccc 15446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 28 - 172
Target Start/End: Complemental strand, 44630592 - 44630448
Alignment:
Q  28 attatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnn 127  Q
    |||||| |||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||   ||||        
T  44630592 attattattatcattatcaggtatttaaaattaaacaccactatttaaacaatactaatgtgtgtgttctattttatgtgggacctccaagttctatttt 44630493  T
Q  128 nnncaattcacacaacattagatcaaagtataattagttggtgtt 172  Q
       |||||||||||||| ||||||||| | |||| | ||||||||    
T  44630492 tttcaattcacacaacactagatcaaaatttaataaattggtgtt 44630448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 28604026 - 28604191
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||| |||| ||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||  |||| ||| |  |||||||||||||||| || |    
T  28604026 ataattattattattattttcatcattatcatgtatttaaaattaaatatcactatttaaacactgataatctgtgtaatctattttatgtggga-ccgc 28604124  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    | ||||||       |||||||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  28604125 atactcta-ttttttcaattcacacaacactagatcaaaatttaattacttggtgtttaatcttccaa 28604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 32080318 - 32080484
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccca 116  Q
    ||||||||||||||||||||||||||||| ||| |||||| ||||||| || ||| |||| |||| |||| ||| ||||||||||||||||||||| |||    
T  32080318 aataattactattatttttatcattatcaggtacttaaaaattaaatatcataatataaatactattaatatgtgtgttctattttatgtgggacctcca 32080417  T
Q  117 cactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
     ||||||       |||||||||||| ||| | ||||||| | || | ||||||||| |||||||||    
T  32080418 aactctatttttttcaattcacacaatattggttcaaagtctcatgacttggtgtttgatcttccaa 32080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 34495262 - 34495183
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgtt 95  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| ||| ||||    
T  34495262 ataataatgactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactaataatatgtgtgtt 34495183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 40846537 - 40846478
Alignment:
Q  157 ataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  40846537 ataattatttggtgtttaatcttccaatttttcttccaacatcacaccaatgttccaaca 40846478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 12002061 - 12001954
Alignment:
Q  16 ataataattactattatttttatcattatcaagta------tttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtggg 109  Q
    |||||||||||||||||||||||||||||||| ||      || ||||||||||| | ||||| ||||||||||||||||| | || ||||||||||| |    
T  12002061 ataataattactattatttttatcattatcaattacaaatattaaaaattaaatatcgcaattcaaacactactaatgtgtgtattttattttatgtgag 12001962  T
Q  110 acccccac 117  Q
    || |||||    
T  12001961 acacccac 12001954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 7735474 - 7735576
Alignment:
Q  22 attactattatttttatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacact 120  Q
    ||||||||||||||||| ||||||  ||| || ||||||||||| || ||| |||||||||||||| | | |||| |||||||| ||| ||| ||||| |    
T  7735474 attactattatttttattattatcgggtacttgaaaattaaatatcataatataaacactactaatatatgtgttatattttatatggcacctccacatt 7735573  T
Q  121 cta 123  Q
    |||    
T  7735574 cta 7735576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 7712198 - 7712114
Alignment:
Q  18 aataattactattattttt--atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctatt 100  Q
    |||||||||||||||||||  ||||||||||  ||||||||| |||||| |||||| || ||| || |||| ||| |||||||||    
T  7712198 aataattactattattttttcatcattatcagatatttaaaaataaatatcacaatatagacattattaatatgtgtgttctatt 7712114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 16 - 218
Target Start/End: Original strand, 4931163 - 4931364
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  4931163 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 4931262  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4931263 acactcta-ttttttcaattcacacaacattatatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 4931361  T
Q  216 ata 218  Q
    |||    
T  4931362 ata 4931364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 26342136 - 26342344
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  26342136 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgtgttctattttat 26342235  T
Q  105 gtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatc 204  Q
    |||||||||||||||| |        ||||||||| || |||| || |||||||||||| ||| | |||||||||| ||||||||||||||||||||||     
T  26342236 gtgggacccccacactat---tttttcaattcacataatattaaattaaagtataattacttgatatttaatcttcgaatttttcatccaacatcacatt 26342332  T
Q  205 aatgttccaaca 216  Q
    ||||||||||||    
T  26342333 aatgttccaaca 26342344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 12256962 - 12257160
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  12256962 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgcgtgtgttctattttatgtggga-cccc 12257060  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||| ||||||||||| ||||||||||||||| |||||| |||||||||||| || |  |||||||||||| ||||||||||||    
T  12257061 acactcta-ttttttcaatttacacaacattaaatcaaagtataattatttggtgattaatcttccaaattctattccaacatcacaccaatgttccaac 12257159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 222
Target Start/End: Original strand, 21672145 - 21672349
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| || ||||||||||||||||  |||    
T  21672145 ataataattactattatttttatcattatcaagtatataaaattaaataccgcaatttaaacagtactaatgtgtgtgctctattttatgtggga-tccc 21672243  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||| ||||       ||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  21672244 acattcta-ttttttcaattcacacaacgttagatcaaagtataattacttggtgtttattcttccaatttttcttccaacatcacaccaatgttccaac 21672342  T
Q  216 ataaact 222  Q
    | |||||    
T  21672343 aaaaact 21672349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 3880908 - 3881111
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactacta---atgtgtttgttctattttatgtgggacc 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||   |||||| |||||||||||||||| ||||    
T  3880908 ataataattactattatttttatcattatcaagtatttaaaattaaatatcacaatttaagcactactaatgatgtgtgtgttctattttatgtgagacc 3881007  T
Q  113 cccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcc 212  Q
    |||||||||||       |||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| |||| | ||||    
T  3881008 cccacactcta-ttttttcaattcacgcaatattagatcaaagtataattacttggtatttaatcttccaatttttcttccaacatcagatcactattcc 3881106  T
Q  213 aacat 217  Q
    |||||    
T  3881107 aacat 3881111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 27 - 217
Target Start/End: Original strand, 3046525 - 3046713
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannn 126  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       
T  3046525 tattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtggga-ccccacact-taatt 3046622  T
Q  127 nnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacat 217  Q
        ||||||||||||| ||| |||||| |||||||| ||||||||||||||| ||||||||| |||||||||||| ||||||| ||||||    
T  3046623 ttttcaattcacacaactttatatcaaattataattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgtttcaacat 3046713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 186
Target Start/End: Complemental strand, 42625739 - 42625565
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaatac-----cacaatttaaacactactaatgtgtttgttctattttatgtggga 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||     | |||||||||||||||||||||||  ||||||||||||||||||    
T  42625739 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaccgcaatttaaacactactaatgtgtgagttctattttatgtggga 42625640  T
Q  111 cccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaattt 186  Q
    |||||||||||||       ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42625639 cccccacactcta-ttttttcaattcacataacattagatcaaagtataattacttggtgtttaatcttccaattt 42625565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 123
Target Start/End: Complemental strand, 12181902 - 12181801
Alignment:
Q  22 attactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12181902 attactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactc 12181803  T
Q  122 ta 123  Q
    ||    
T  12181802 ta 12181801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 10392246 - 10392044
Alignment:
Q  16 ataataattac-tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    ||||||||||| | || ||||||| ||||||||||||||||||||||||||| |||||||||||||  |||  ||| |||||||||||||||||| |||     
T  10392246 ataataattacattttttttttattattatcaagtatttaaaattaaataccgcaatttaaacactgataacatgtgtgttctattttatgtggggccct 10392147  T
Q  115 cacactcta-nnnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    |||||||||        |||||||||||||| |||||||||||||||||| ||||||||||||||| | ||||| |  ||||| ||||| ||||||||||    
T  10392146 cacactctattttttttcaattcacacaacactagatcaaagtataattacttggtgtttaatctttcgattttcctcccaacttcacaccaatgttcca 10392047  T
Q  214 aca 216  Q
    |||    
T  10392046 aca 10392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 26286314 - 26286146
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||| | ||||||||| ||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  26286314 ataataataattattattttcatcattatcagttatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 26286215  T
Q  116 acact-ctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
    |||||  |        ||||| | |||||| ||||||||||| |||||| |||||||||||||||||||    
T  26286214 acactattttttttttcaatttatacaacactagatcaaagtttaattacttggtgtttaatcttccaa 26286146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 44508401 - 44508261
Alignment:
Q  67 acaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagtt 166  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||  |||||||||||       |||||||||||| |||||||||||||||||||| ||    
T  44508401 acaatttaaacactactaatatgtgtgttctattttatatgggattcccacactctatttttt-caattcacacaatattagatcaaagtataattactt 44508303  T
Q  167 ggtgtttaatcttccaatttttcatccaacatcacatcaatg 208  Q
    | | ||||||||||||||||||||||||||||||||||||||    
T  44508302 gatatttaatcttccaatttttcatccaacatcacatcaatg 44508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 13313468 - 13313363
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccac 117  Q
    |||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  13313468 aataattgttattattttcatcattatcaagtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacatccac 13313369  T
Q  118 actcta 123  Q
    ||||||    
T  13313368 actcta 13313363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 23247701 - 23247554
Alignment:
Q  29 ttatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnn 128  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| | | |||||||||| |||||| ||  ||||||||         
T  23247701 ttatttttatcattatcaagtatttaaaattaaataccgtaatttaaacactactaatgtttgttttctattttaggtggga-ccatacactcta-tttt 23247604  T
Q  129 nncaattcacacaacattagatcaaagtataattagttggtgtttaatct 178  Q
      ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  23247603 ttcaattcacataacattagatcaaagtataattacttggtgtttaatct 23247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 212
Target Start/End: Original strand, 2595774 - 2595905
Alignment:
Q  80 tactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatctt 179  Q
    ||||||||||| |||||||||||||||||||  |||||||||||       |||||||||||||||||||| ||||| |||||| |||||||||||||||    
T  2595774 tactaatgtgtgtgttctattttatgtgggatacccacactctatttttt-caattcacacaacattagattaaagtgtaattatttggtgtttaatctt 2595872  T
Q  180 ccaatttttcatccaacatcacatcaatgttcc 212  Q
    |||||||||| |||||||| |||||||||||||    
T  2595873 ccaatttttcttccaacattacatcaatgttcc 2595905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 12800330 - 12800404
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  12800330 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgt 12800404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 9815032 - 9814924
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||| ||||||||||| | ||||||||||||||| ||| |||    
T  9815032 ataataattactattattttcattattatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgttggatccc 9814933  T
Q  115 cacactcta 123  Q
    |||| ||||    
T  9814932 cacattcta 9814924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 93 - 216
Target Start/End: Original strand, 12802300 - 12802421
Alignment:
Q  93 gttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatc 192  Q
    |||||||||||||||||||||| ||||||||       |||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |  ||    
T  12802300 gttctattttatgtgggacccc-acactctatttttt-caattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttattttc 12802397  T
Q  193 caacatcacatcaatgttccaaca 216  Q
    ||||||||||  ||||||||||||    
T  12802398 caacatcacactaatgttccaaca 12802421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 4580420 - 4580512
Alignment:
Q  31 atttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    ||||| |||||||||| ||||||| ||||||||||||| || |||||||||||||||||| ||||||||||||| ||||||||| ||||||||    
T  4580420 attttcatcattatcaggtatttagaattaaataccactatataaacactactaatgtgtgtgttctattttatatgggacccctacactcta 4580512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 10716957 - 10716866
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgt 106  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||| ||||||||| ||||||||||| | |||||||||||||||    
T  10716957 ataataattactattattttcattattatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgt 10716866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 8269240 - 8269312
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||| |||||||    
T  8269240 ataataattactattatttttatcattatcaagtatttaaaattaaatatcgcagtttaaacacttctaatgt 8269312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 23151804 - 23151683
Alignment:
Q  56 aattaaataccacaatttaaacactactaat--gtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaa 153  Q
    ||||||||| | |||||||||||||||||||  |||| |||||||||||||| ||||| |||||||| ||       |||||||||||||||||||||||    
T  23151804 aattaaatatctcaatttaaacactactaatatgtgtgtgttctattttatgcgggactcccacactttatttttt-caattcacacaacattagatcaa 23151706  T
Q  154 agtataattagttggtgtttaat 176  Q
    |||||||||| ||| ||||||||    
T  23151705 agtataattacttgatgtttaat 23151683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 15973668 - 15973767
Alignment:
Q  23 ttactattatttttatcattatcaagtatttaaaatt--aaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacact 120  Q
    |||||||||||||||||||||||  |||||||||| |  |||||||| ||| |||| ||||||||||||| |||||||||||||||| |||| |||||||    
T  15973668 ttactattatttttatcattatccggtatttaaaaattaaaataccataatataaatactactaatgtgtgtgttctattttatgtgcgacctccacact 15973767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 6590169 - 6590099
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaat 86  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||    
T  6590169 ataataatgactattatttttagctttatcaagtatttaaaattaaataatacaatttaaacactactaat 6590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 10387488 - 10387410
Alignment:
Q  34 tttatcattatcaagtatttaaaattaaataccacaatttaaaca-ctactaatgtgtttgttctattttatgtgggac 111  Q
    |||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||| ||||||||||||| ||||||    
T  10387488 tttatcattatcaaatatttaaaattaaataccacaatttaaacacctgctaatatgtgtgttctattttatatgggac 10387410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 16373288 - 16373362
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgt 90  Q
    |||||||| ||||||||||||||| |||||| |||||||||||||| |||  |||||||||||||||||||||||    
T  16373288 ataataatgactattatttttatcgttatcaggtatttaaaattaactactgcaatttaaacactactaatgtgt 16373362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 183
Target Start/End: Original strand, 30259238 - 30259368
Alignment:
Q  52 ttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatc 151  Q
    ||||||||||||| ||| ||||||||||||||||||| | || ||||||||||||||  | |||||||||||       ||||| ||| |||| ||||||    
T  30259238 ttaaaattaaatatcactatttaaacactactaatgtatgtgatctattttatgtggatctcccacactcta-ttttttcaatttacaaaacactagatc 30259336  T
Q  152 aaagtataattagttggtgtttaatcttccaa 183  Q
    ||||| |||||| ||||| |||||||||||||    
T  30259337 aaagtttaattacttggtatttaatcttccaa 30259368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 27246702 - 27246608
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacc 112  Q
    |||||||| | ||||| ||||||||||||||||||||||  | |||||| | |||||||||||||| |||||||  |||||||||||||||| ||||    
T  27246702 ataataatgattattagttttatcattatcaagtatttatgaataaatagcgcaatttaaacactattaatgtg--tgttctattttatgtgagacc 27246608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 44508472 - 44508427
Alignment:
Q  29 ttatttttatcattatcaagtatttaaaattaaataccacaattta 74  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  44508472 ttatttttatcattatcaaatatttaaaattaaataccacaattta 44508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 23152224 - 23152177
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaat 63  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||    
T  23152224 ataataataattattatttttatcattatcaagtttttaaaattaaat 23152177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 10387386 - 10387346
Alignment:
Q  133 attcacacaacattagatcaaagtataattagttggtgttt 173  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  10387386 attcacacaacactagatcaaagtataattacttggtgttt 10387346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 15643788 - 15643840
Alignment:
Q  27 tattatttttatcattatcaagtattt-aaaattaaataccacaatttaaacac 79  Q
    |||||||||||||||||| |||||||| |||||||| ||| |||||||||||||    
T  15643788 tattatttttatcattat-aagtatttaaaaattaagtactacaatttaaacac 15643840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 8269362 - 8269394
Alignment:
Q  131 caattcacacaacattagatcaaagtataatta 163  Q
    |||||||||||| ||||||||||||||||||||    
T  8269362 caattcacacaatattagatcaaagtataatta 8269394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 30259021 - 30259065
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaatta 60  Q
    ||||| |||| ||||||||| |||||||||| |||||||||||||    
T  30259021 ataattattattattattttcatcattatcaggtatttaaaatta 30259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 40125050 - 40124851
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  40125050 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 40124951  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40124950 acactcta-ttttttcaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 40124852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 38181438 - 38181253
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |    
T  38181438 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggactctc 38181339  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcaca 202  Q
    ||||| ||       ||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||||||| ||||    
T  38181338 acacttta-ttttttcaattcacacaacattagatcaaagtataattacttgatgtttaatgttccaatttttcttccaacaacaca 38181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 1808391 - 1808590
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  1808391 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacacttctaatgtgtgtgttctattttatatggga-cccc 1808489  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||| ||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  ||||||||||||  |||||||||||    
T  1808490 acactata-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcacactaatgttccaac 1808588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 15950731 - 15950528
Alignment:
Q  16 ataataattactattatttttatcat---tatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacc 112  Q
    ||||||||||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||    
T  15950731 ataataattactattatttttatcatcattatcaagtatttaaaattaaataccgcaatttaaacactattaatgtgtgtgttctattttatgtggcacc 15950632  T
Q  113 cccacactctannnnnnncaattcacacaacattagatcaaagta----taattagttggtgtttaatcttccaatttttcatccaacatcacatcaatg 208  Q
     ||||||||||       |||||||||||||||||||||||||||    |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  15950631 tccacactcta-ttttttcaattcacacaacattagatcaaagtataattaattacttggtgtttagtcttccaatttttcatccaacatcacatcaatg 15950533  T
Q  209 ttcca 213  Q
    |||||    
T  15950532 ttcca 15950528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 28559272 - 28559073
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  28559272 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 28559173  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       | ||  |||||||||||||| ||||||||| || ||||||||||||||||||||||||| || ||||| |||||||| |||||||    
T  28559172 acactctattttttcc-atgtacacaacattagattaaagtataa-tatttggtgtttaatcttccaatttttcttcgaacattacatcaattttccaac 28559075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 26780044 - 26780234
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||    
T  26780044 ataataattactattgtttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacaccc 26780143  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatg 208  Q
    ||||||||       ||||||||||||||||| || | |||||||||| || ||||||||||||  |||||||| |||||||| |||||||||    
T  26780144 acactcta--gttttcaattcacacaacattaaattagagtataattacttagtgtttaatcttttaatttttcttccaacattacatcaatg 26780234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 44925077 - 44924878
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||| ||    
T  44925077 ataataattactgttatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgttttctattttatgtgggacctcc 44924978  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    | ||||||       |||||||||||| |||||||||||||||||||  || ||||||||||||||||||| |  ||||||||||||  |||||||||||    
T  44924977 aaactcta-atttttcaattcacacaagattagatcaaagtataattgattagtgtttaatcttccaatttattttccaacatcacactaatgttccaac 44924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 2966525 - 2966710
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  2966525 ataataattactataatttttatcattattaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatatgggaccctc 2966624  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcaca 202  Q
    ||||||||       |||||| || |||||||||| ||| |||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  2966625 acactcta-ttttttcaattcccataacattagataaaaatataattatttgatgtttaatcttccaatttttcttccaacatcaca 2966710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 28564451 - 28564258
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||| ||| ||    
T  28564451 ataataattactattatttttatcattatcaaatatttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtggaacctcc 28564352  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    ||||| |        ||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| | || |||||||||    
T  28564351 acactat---tttttcaatgtacacaacattagatcaaagtataa-tatttggtgtttaatcttccaatttttcttccaacattatatgaatgttcca 28564258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 21 - 216
Target Start/End: Complemental strand, 1910099 - 1909904
Alignment:
Q  21 aattactattattttt-atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacac 119  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||  | ||||||| |||||||||  ||||||    
T  1910099 aattactattattttttatcattatcaagtatttaaaattaaataccactgtttaaacactactaatgtgtgagctctatttcatgtgggacatccacac 1910000  T
Q  120 tctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |  |||||||||| |  ||||||||||||    
T  1909999 tcta-ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcatactaatgttccaaca 1909904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 201
Target Start/End: Complemental strand, 18875539 - 18875357
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccac 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||| ||    
T  18875539 aataattactattatttgtatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgtgtgttctattgtatgtgggacccctac 18875440  T
Q  118 actctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcac 201  Q
    || |||       |||||||||||||||||||||||| | |||||| |  || ||||||||||||||||||| |||||||||||    
T  18875439 acacta-ttttttcaattcacacaacattagatcaaaatttaattactcagtatttaatcttccaatttttcttccaacatcac 18875357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 123
Target Start/End: Original strand, 33417459 - 33417577
Alignment:
Q  5 tctcgaagaatataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttat 104  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33417459 tctcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttat 33417558  T
Q  105 gtgggacccccacactcta 123  Q
    ||| |||||  ||||||||    
T  33417559 gtgagacccatacactcta 33417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 7002594 - 7002783
Alignment:
Q  27 tattatttttatcattatcaagtattta--aaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctan 124  Q
    ||||||||||||| |||||  |||||||  |||||||||||||||||||||||||||||||||| | | |||||||||||||| || ||||||||||||     
T  7002594 tattatttttatctttatcgggtatttagaaaattaaataccacaatttaaacactactaatgtatgtattctattttatgtgagatccccacactcta- 7002692  T
Q  125 nnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
          |||||||||||| | ||||||||||| |||||| ||||||||||||||| ||| ||||| |  ||| ||||| |||||||||||||    
T  7002693 ttttttcaattcacacaatactagatcaaagtctaattacttggtgtttaatctttcaa-ttttctttaaacttcacaccaatgttccaaca 7002783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 17021243 - 17021341
Alignment:
Q  63 taccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataatt 162  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||    
T  17021243 taccgcaatttaaacactactaatgtgtgtgttctattttatgtggga-ccccacactcta-ttttttcaattcacacaacattagatcaaagtataatt 17021340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 17551680 - 17551778
Alignment:
Q  63 taccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataatt 162  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||    
T  17551680 taccgcaatttaaacactactaatgtgtgtgttctattttatgtggga-ccccacactcta-ttttttcaattcacacaacattagatcaaagtataatt 17551777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 23547758 - 23547700
Alignment:
Q  18 aataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaa 76  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23547758 aataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaa 23547700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 33417599 - 33417650
Alignment:
Q  165 ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33417599 ttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 33417650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17027081 - 17027136
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaat 71  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  17027081 ataataattagtattatttttatgattatcaagtatttaaaattaaataccacaat 17027136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17557573 - 17557628
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaat 71  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  17557573 ataataattagtattatttttatgattatcaagtatttaaaattaaataccacaat 17557628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 17953290 - 17953164
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannn 126  Q
    ||||||||||||||| |||| | ||||||||| ||||||||| ||| |||||||||| |||||| ||||||||||| ||||| | ||||||||||||       
T  17953290 tattatttttatcataatcaggcatttaaaataaaataccactatt-aaacactactgatgtgtgtgttctattttttgtggta-ccccacactcta-tt 17953194  T
Q  127 nnnncaattcacacaacattagatcaaagt 156  Q
        |||||||||||||| |||||||||||    
T  17953193 ttttcaattcacacaacactagatcaaagt 17953164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 27 - 117
Target Start/End: Complemental strand, 24672464 - 24672374
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccac 117  Q
    |||||||| ||||||||| ||||||||| ||||||||| |||||||||||||||| | || ||  || |||||||||| ||||||||||||    
T  24672464 tattatttctatcattattaagtatttacaattaaatatcacaatttaaacactattgatctgcgtgctctattttatttgggacccccac 24672374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 17027165 - 17027225
Alignment:
Q  156 tataattagttggtgtttaatcttccaatttt-tcatccaacatcacatcaatgttccaaca 216  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17027165 tataatta-ttggtgtttaatcttccaattttttcatccaacatcacattaatgttccaaca 17027225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 17557657 - 17557717
Alignment:
Q  156 tataattagttggtgtttaatcttccaatttt-tcatccaacatcacatcaatgttccaaca 216  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  17557657 tataatta-ttggtgtttaatcttccaattttttcatccaacatcacattaatgttccaaca 17557717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 31440200 - 31440254
Alignment:
Q  48 gtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctatttt 102  Q
    ||||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  31440200 gtatttaaaattaaatatcacaatttaaacactactaatgattgtgttctatttt 31440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 112
Target Start/End: Original strand, 33100541 - 33100623
Alignment:
Q  29 ttatttttatcattatcaagtattt-aaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacc 112  Q
    ||||| ||||||||||||||||||| ||||||||||||  ||||||||| | || |||||||  | |||||||||||||||||||    
T  33100541 ttattgttatcattatcaagtatttaaaaattaaatactgcaatttaaagattattaatgtg--tattctattttatgtgggacc 33100623  T

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Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 28859335 - 28859422
Alignment:
Q  21 aattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtggga 110  Q
    |||||||||| |||| ||| ||||||  |||||||| |||||||  || ||||||| ||||||| | ||| |||||||||||||||||||    
T  28859335 aattactattcttttcatcgttatcatatatttaaagttaaata--actatttaaatactactattatgtgtgttctattttatgtggga 28859422  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 22714154 - 22714109
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaa 61  Q
    |||||||||||||||| || |||||||||| |||||||| ||||||    
T  22714154 ataataattactattacttgtatcattatctagtatttacaattaa 22714109  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 23547644 - 23547568
Alignment:
Q  140 caacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaaca 216  Q
    ||||||||||| ||| |||||||| |   ||||||||||| ||||||||| | |||||| | | |||||||||||||    
T  23547644 caacattagattaaaatataattattcaatgtttaatctttcaatttttctttcaacattaaaccaatgttccaaca 23547568  T

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Target: scaffold0352 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 8037 - 8253
Alignment:
Q  5 tctcgaagaatataataattactattatttt-tatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctatttta 103  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  8037 tctcgaataaaataataattactattattttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatctta 8136  T
Q  104 tgtgggacccccacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacat 203  Q
    ||||||||||||||||||||       ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||    
T  8137 tgtgggacccccacactcta-ttttttcaattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttatcatccaacatcgcat 8235  T
Q  204 caatgttccaacataaac 221  Q
    ||||||||||||| ||||    
T  8236 caatgttccaacaaaaac 8253  T

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Target: scaffold0002 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 5004 - 5203
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||    
T  5004 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgagtgttctattttatgcgggaccccc 5103  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5104 acactcta-ttttttcaattcacacaacattagatcaaagtatattaacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaac 5202  T

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Target: scaffold0002; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 217
Target Start/End: Complemental strand, 443095 - 442896
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| ||||    
T  443095 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacccaactaatgtgtgtgttctattttatgtggga-cccc 442997  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaac 215  Q
    ||||||||       ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||| |  ||||||||||||  ||| |||||||    
T  442996 acactcta-ttttttcaattcacacaacattagatcaaagtataattatttaatgtttaatcttccaatttattttccaacatcacagtaatattccaac 442898  T

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Target: scaffold0002; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 155181 - 155265
Alignment:
Q  40 attatcaagtatttaaaa-ttaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactcta 123  Q
    ||||||| |||||||||| || ||||||| ||||||||||||||| |||| | | ||||||||||| ||||| || |||||||||    
T  155181 attatcaggtatttaaaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactcta 155265  T

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Target: scaffold0054 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 30117 - 30313
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||     
T  30117 ataataattactattatttttatcattatcatgtagttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccct 30216  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    ||||||||       |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30217 acactcta-ttttttcaattcacacaacattagatcaaaatataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 30313  T

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Target: scaffold0054; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 183
Target Start/End: Original strand, 26393 - 26547
Alignment:
Q  28 attatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnn 127  Q
    |||||||| || ||||||| ||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||| || |||||||        
T  26393 attattttcattattatcaggtatttaaaattaaatacctctatttaaacactactaatgtgtgtgttctattttatgtgggacctccgcactcta-ttt 26491  T
Q  128 nnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa 183  Q
       |||||||||||||  ||||| ||||| |||||| |||||||||||||||||||    
T  26492 tttcaattcacacaactctagatgaaagtttaattatttggtgtttaatcttccaa 26547  T

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Target: scaffold0690 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 6172 - 6372
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||| |||||||||||| |     
T  6172 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacaccactaatgtgtgtattctatcttatgtgggacctca 6271  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaa-tttttcatccaacatcacatcaatgttccaa 214  Q
    ||||||||       ||||||||| ||||||||||| ||||||||||| |||||||||||| ||  || |||||| ||||||||| || |||||||||||    
T  6272 acactcta-ttttttcaattcacataacattagatcgaagtataattacttggtgtttaattttataattttttcttccaacatcgcaccaatgttccaa 6370  T
Q  215 ca 216  Q
    ||    
T  6371 ca 6372  T

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Target: scaffold0240 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 216
Target Start/End: Original strand, 4911 - 5108
Alignment:
Q  16 ataataattactattattttt-atcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccc 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| |||||| |||  ||| |||||||||||| |||||    
T  4911 ataataattactattattttttatcattatcaagtatttaaaattaaataccgcaacttaaacacaactaatatgt--gttatattttatgtggtacccc 5008  T
Q  115 cacactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 214  Q
     ||||| ||       |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||| |||||||||||| ||||| |||||    
T  5009 -acactatatttttt-caattcacacaacattagatcaaagtataattacgtggtgtttaatctttcaatttttcttccaacatcacaccaatgatccaa 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 36062 - 36257
Alignment:
Q  16 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggaccccc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||| ||  |||||||||||||||||  ||||    
T  36062 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcagtttaaacactactaatgcgtgagttctattttatgtggg-gcccc 36160  T
Q  116 acactctannnnnnncaattcacacaacattagatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 213  Q
    ||||||||       ||||||| |||||||||||||||| |||||||| ||||||||||||||| |||||| |  | ||||||||||  |||||||||    
T  36161 acactcta-ttttttcaattcatacaacattagatcaaaatataattatttggtgtttaatctttcaatttatttttcaacatcacactaatgttcca 36257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 53 - 183
Target Start/End: Complemental strand, 65013 - 64885
Alignment:
Q  53 taaaattaaataccacaatttaaacactactaatgtgtttgttctattttatgtgggacccccacactctannnnnnncaattcacacaacattagatca 152  Q
    |||| ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||        ||||||||||||| |||||||    
T  65013 taaatttaaataccactatttaaagactactaatgtgtgtgttctattttatgtgggacccctacactctattttttt-aattcacacaacactagatca 64915  T
Q  153 aagtataattagttggtgtttaatcttccaa 183  Q
    |||| |||||| || ||||||||||||||||    
T  64914 aagtttaattactt-gtgtttaatcttccaa 64885  T

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Target: scaffold0595 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 3948 - 3904
Alignment:
Q  27 tattatttttatcattatcaagtatttaaaattaaataccacaat 71  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||    
T  3948 tattatttttatcattatcaagtatttgaaattaaataccgcaat 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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