View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21134_high_14 (Length: 373)
Name: NF21134_high_14
Description: NF21134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21134_high_14 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 17 - 373
Target Start/End: Original strand, 41182192 - 41182548
Alignment:
| Q |
17 |
aaggcaggatcaccaaatttgtcaatcaatcaagtaattaacaaatatgagtagagttctctatgtttgactatactccacttgttttacaagcaactat |
116 |
Q |
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| T |
41182192 |
aaggcaggatcaccaaatttgtcaatcaatcaagtaattaacaaatatgagtagagttctctatgtttgactatactccacttgttttacaagcaactat |
41182291 |
T |
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| Q |
117 |
tactaatcatagcttaactaaaatatttcataaaaaataccataattagtattaaaagttaaaactaataatgtccatttcattggagaacgacaaatta |
216 |
Q |
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| T |
41182292 |
tactaatcatagcttaactaaaatatttcataaaaaataccataattagtattaaaagttaaaactactaatgtccatttcattggagaacgacaaatta |
41182391 |
T |
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| Q |
217 |
agtacgatcttacttacatcacactctctctttggctttaattgagaccaccaacaaggtcagtgcaattccnnnnnnnagcttaaaaacaataacgtgt |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||| |
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| T |
41182392 |
agtacgatcttacttacatcacactctctctttggctttaattgagaccaccaacaagttcagtgcagttcctttttttagcttaaaaacaataacgtgt |
41182491 |
T |
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| Q |
317 |
gtgcctgaaattctgacaatgttaaaaattctttgaagtttttgtatttgtattttt |
373 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
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| T |
41182492 |
gtgcctgaaattctgacattgttaaaaattctttgaagtttttgtagttgtattttt |
41182548 |
T |
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