View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21134_high_22 (Length: 253)
Name: NF21134_high_22
Description: NF21134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21134_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 27746574 - 27746434
Alignment:
| Q |
10 |
agatgaaggaaaggggtattatcaagtgcaaacatttattacatggagtagaaacaactgctagtggaaaggaatgaacaacgacgtttgtttgtaggat |
109 |
Q |
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| T |
27746574 |
agatgaaggaaaggggtattatcaagtgcaaacatttattacatggagtagaaacaactgctagtggaaaggaatgaacaacgacgtttgtttgtaggat |
27746475 |
T |
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| Q |
110 |
attgatgtatggtttccccccaaaaagagagcatgaccatg |
150 |
Q |
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| T |
27746474 |
attgatgtatggtttccccccaaaaagagagcatgaccatg |
27746434 |
T |
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