View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21134_high_25 (Length: 245)
Name: NF21134_high_25
Description: NF21134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21134_high_25 |
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Alignment Details
Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 45491764 - 45491602
Alignment:
| Q |
66 |
cgtctacaaaaaatatatattcataaataaatagtgaagagaatgaaaagcaaatgcaaaagatgtttctgaatgtgaacaagaaaccaggaacctaata |
165 |
Q |
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| T |
45491764 |
cgtctacaaaaaatatatattcataaataaatagtgaagagaatgaaaagcaaatgcaaaagatgtttctgaatgtgaacaagaaaccaggaacctaata |
45491665 |
T |
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| Q |
166 |
acatgcaaaacaaactacaccatccgcacctaattatatgtcgattcatttatattgtaaaat |
228 |
Q |
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| T |
45491664 |
acatgcaaaacaaattacaccaaccgcacctaattatatgtcgattcatttatattgtaaaat |
45491602 |
T |
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