View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21134_low_32 (Length: 236)
Name: NF21134_low_32
Description: NF21134
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21134_low_32 |
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Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 40593553 - 40593777
Alignment:
| Q |
1 |
atgatttgcactacacaaaaatctagctaaaacattggaagcaaattttatctaccttcatttcaatt---ctcaagagtcaagaccacattacaaggca |
97 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
40593553 |
atgatttgcactacacaaaaatctagctaaaacattggaagcaaattttatctaccttcatttcaataatgctcaagagtcaagaccacattacaaggca |
40593652 |
T |
|
| Q |
98 |
catgccaataatcatcctacaaagtcaagatgtctaagttgcacaccttcaacaccatgcctaagttccaatgtcaatgaaacagatccaatccaagtga |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40593653 |
catgccaataatcatcctacaaagtcaagatgtctaagttgcacaccttcaacaccatgcctaagttccaatgtcaatgaaacagatccaatccaagtga |
40593752 |
T |
|
| Q |
198 |
tctcacaacatcatgtccactatgt |
222 |
Q |
| |
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||||||||||||||||||||||||| |
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| T |
40593753 |
tctcacaacatcatgtccactatgt |
40593777 |
T |
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