View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21135_high_14 (Length: 280)
Name: NF21135_high_14
Description: NF21135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21135_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 268
Target Start/End: Complemental strand, 43514174 - 43513924
Alignment:
| Q |
18 |
tgtttatcatcccaccaaactttcaatttaagcactcttaattcatcaatcaatgacacgttcatcagccacaacagtgacatattgatctatgtagaaa |
117 |
Q |
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| T |
43514174 |
tgtttctcatctcaccaaactttcaatttaagcactcttaattcatcaatcaatgacacgttcatcagacacaacagtgacatattgatctatgtagaaa |
43514075 |
T |
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| Q |
118 |
tgatattattgaatttaaccacgtatgtctgtgtttgacattgatccatgtcgaatgtagaggacattattgaatataatcacaagtgtctctgtatcgc |
217 |
Q |
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||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| | |
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| T |
43514074 |
tgatattattgaatttaaccatgtatgtttgtgtttgacactgatccatgtcgaatgtagaggacattattgaatataatcacaagtttctccgtatcac |
43513975 |
T |
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| Q |
218 |
attgattcatgtttataactgtatgtgtgctctataacaacaatttttgtg |
268 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43513974 |
attgattcatgtttataactgtatgtgtgctctataacaacaatttttgtg |
43513924 |
T |
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