View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF21135_high_30 (Length: 212)
Name: NF21135_high_30
Description: NF21135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21135_high_30 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 151; Significance: 4e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 4e-80
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 46455378 - 46455228
Alignment:
| Q |
41 |
tattcagacaattcatgacactgcaatcaaaaatatacccatccaaaccaagtctccaatctaaaatagacaccaaaaactcttacaattgataatagca |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46455378 |
tattcagacaattcatgacactgcaatcaaaaatatacccatccaaaccaagtctccaatctaaaatagacaccaaaaactcttacaattgataatagca |
46455279 |
T |
|
| Q |
141 |
agtagtaagtactgtttcccaatcataataacgcaatggaatagtaaggct |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46455278 |
agtagtaagtactgtttcccaatcataataacgcaatggaatagtaaggct |
46455228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University