View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21135_low_14 (Length: 281)
Name: NF21135_low_14
Description: NF21135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21135_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 3923937 - 3924201
Alignment:
| Q |
1 |
catgatagcccctctagcaaggttcgtaccagcttgatcctctaacatataccgttgaggtgccaatgaagattctggtggcaccctttttggaatatca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3923937 |
catgatagcccctctagcaaggttcgtaccagcttgatcctctaacgtataccgttgaggtgccaatgaagattctggtggcaccctttttggaatatca |
3924036 |
T |
|
| Q |
101 |
ccaacagcgaactttacatgaccaatgaacatacctgacgtcctgtctttcaagaaaacatctacgttgctagagctattttttccattatcaaaagcaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3924037 |
ccaacagcgaactttacatgaccaatgaacatacctgacgtcctgtctttcaagaaaacatctacgttgctagagctattttttccattatcaaaagcaa |
3924136 |
T |
|
| Q |
201 |
acacttggttcaatgatgagttgctggtttctaagaaaaatgttgttgcttttacgtttccaagt |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
3924137 |
acacttggttcaatgatgagttgctggtttctaagaaaaatgttgttgcttttgcgtttccaagt |
3924201 |
T |
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