View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21135_low_7 (Length: 425)

Name: NF21135_low_7
Description: NF21135
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21135_low_7
NF21135_low_7
[»] chr1 (49 HSPs)
chr1 (255-412)||(25983299-25983457)
chr1 (19-111)||(25983612-25983702)
chr1 (15-111)||(2571393-2571490)
chr1 (18-82)||(29225786-29225850)
chr1 (13-101)||(34813945-34814034)
chr1 (15-103)||(19348985-19349072)
chr1 (15-102)||(45305883-45305970)
chr1 (15-101)||(3718840-3718927)
chr1 (15-104)||(25819335-25819424)
chr1 (15-111)||(31798448-31798545)
chr1 (13-101)||(39420612-39420703)
chr1 (15-77)||(27932849-27932911)
chr1 (18-93)||(35622779-35622854)
chr1 (15-78)||(37925261-37925324)
chr1 (19-111)||(21304786-21304880)
chr1 (13-99)||(25842627-25842713)
chr1 (18-107)||(27831879-27831969)
chr1 (18-76)||(37281014-37281072)
chr1 (18-111)||(49662738-49662831)
chr1 (21-88)||(30903232-30903299)
chr1 (17-111)||(27391379-27391476)
chr1 (18-76)||(29225425-29225483)
chr1 (18-101)||(16040110-16040194)
chr1 (18-94)||(34877088-34877165)
chr1 (27-111)||(44580558-44580643)
chr1 (15-51)||(2886201-2886237)
chr1 (15-101)||(27209958-27210045)
chr1 (18-73)||(29756162-29756217)
chr1 (15-51)||(33149303-33149339)
chr1 (15-102)||(40061839-40061927)
chr1 (18-111)||(24131381-24131475)
chr1 (15-73)||(26924140-26924198)
chr1 (15-111)||(40754393-40754491)
chr1 (15-73)||(46363431-46363489)
chr1 (18-94)||(14352599-14352676)
chr1 (18-88)||(29678859-29678929)
chr1 (34-102)||(49944981-49945050)
chr1 (27-76)||(50926789-50926838)
chr1 (15-49)||(52146699-52146733)
chr1 (15-87)||(52382391-52382464)
chr1 (18-101)||(11425860-11425944)
chr1 (13-82)||(25869711-25869780)
chr1 (18-101)||(36232780-36232864)
chr1 (15-51)||(2246319-2246355)
chr1 (15-51)||(10587623-10587659)
chr1 (18-73)||(12267651-12267706)
chr1 (18-73)||(26583761-26583816)
chr1 (18-73)||(37495862-37495917)
chr1 (10-50)||(43895872-43895912)
[»] chr8 (34 HSPs)
chr8 (18-111)||(2195501-2195596)
chr8 (18-94)||(10728920-10728996)
chr8 (18-99)||(7258359-7258441)
chr8 (13-94)||(27868322-27868404)
chr8 (18-111)||(14689993-14690089)
chr8 (15-101)||(5878217-5878303)
chr8 (18-67)||(15020705-15020754)
chr8 (19-87)||(15559134-15559203)
chr8 (15-71)||(1230384-1230439)
chr8 (11-94)||(27973683-27973767)
chr8 (11-94)||(28030952-28031036)
chr8 (18-110)||(2797073-2797167)
chr8 (16-111)||(29451380-29451475)
chr8 (13-51)||(14748747-14748785)
chr8 (19-76)||(40077766-40077823)
chr8 (18-111)||(42412361-42412457)
chr8 (18-101)||(5392082-5392166)
chr8 (15-101)||(39998193-39998280)
chr8 (13-76)||(26570168-26570231)
chr8 (13-51)||(886489-886527)
chr8 (18-76)||(17005978-17006036)
chr8 (18-76)||(17571212-17571270)
chr8 (27-111)||(26677115-26677203)
chr8 (13-94)||(27875139-27875221)
chr8 (19-52)||(2875126-2875159)
chr8 (15-76)||(8418318-8418379)
chr8 (15-68)||(25174609-25174662)
chr8 (18-101)||(28791341-28791425)
chr8 (27-76)||(44225937-44225986)
chr8 (15-51)||(11637170-11637206)
chr8 (27-101)||(29730886-29730961)
chr8 (54-111)||(36011972-36012031)
chr8 (18-73)||(41726554-41726609)
chr8 (18-77)||(41759645-41759704)
[»] chr5 (34 HSPs)
chr5 (18-111)||(35988667-35988762)
chr5 (18-111)||(39212534-39212626)
chr5 (18-108)||(25111132-25111223)
chr5 (18-108)||(25170223-25170314)
chr5 (27-70)||(72128-72171)
chr5 (34-111)||(6629375-6629451)
chr5 (19-103)||(7311169-7311254)
chr5 (18-94)||(5072983-5073059)
chr5 (18-108)||(25108606-25108697)
chr5 (18-108)||(25167698-25167789)
chr5 (18-103)||(36006882-36006967)
chr5 (19-112)||(5147474-5147570)
chr5 (17-101)||(8369687-8369772)
chr5 (15-73)||(13087762-13087819)
chr5 (18-111)||(16926070-16926166)
chr5 (27-112)||(22982986-22983072)
chr5 (14-111)||(42158628-42158725)
chr5 (18-73)||(4044497-4044552)
chr5 (15-51)||(15898221-15898257)
chr5 (10-82)||(17699358-17699430)
chr5 (15-87)||(32659846-32659918)
chr5 (18-77)||(4475279-4475338)
chr5 (18-73)||(13016384-13016438)
chr5 (28-87)||(18319960-18320019)
chr5 (13-51)||(25344780-25344818)
chr5 (19-76)||(792010-792067)
chr5 (18-101)||(5357808-5357892)
chr5 (13-46)||(7179527-7179560)
chr5 (25-78)||(33498509-33498562)
chr5 (15-68)||(38978934-38978987)
chr5 (15-51)||(15564930-15564966)
chr5 (18-70)||(16954898-16954949)
chr5 (19-101)||(35646080-35646163)
chr5 (19-51)||(39060996-39061028)
[»] chr4 (34 HSPs)
chr4 (15-111)||(46958752-46958848)
chr4 (18-94)||(38614961-38615037)
chr4 (13-111)||(49448869-49448970)
chr4 (27-82)||(18872662-18872717)
chr4 (13-76)||(22020527-22020589)
chr4 (13-94)||(21954427-21954509)
chr4 (17-111)||(29990451-29990547)
chr4 (54-99)||(38838690-38838735)
chr4 (15-102)||(22872375-22872465)
chr4 (15-73)||(38319941-38319999)
chr4 (15-73)||(39052920-39052978)
chr4 (15-73)||(32949868-32949926)
chr4 (17-87)||(35027502-35027572)
chr4 (18-68)||(37315946-37315996)
chr4 (15-73)||(53848676-53848734)
chr4 (19-111)||(5499411-5499502)
chr4 (15-51)||(36047141-36047177)
chr4 (15-101)||(38160142-38160229)
chr4 (18-73)||(8759812-8759867)
chr4 (30-101)||(13529907-13529978)
chr4 (17-102)||(38977023-38977110)
chr4 (27-94)||(47386219-47386286)
chr4 (34-111)||(38310338-38310416)
chr4 (15-76)||(55360364-55360425)
chr4 (15-68)||(3505752-3505804)
chr4 (18-71)||(10099746-10099799)
chr4 (17-101)||(17237075-17237160)
chr4 (13-50)||(26799258-26799295)
chr4 (13-50)||(29644383-29644420)
chr4 (13-50)||(41436509-41436546)
chr4 (18-51)||(42132846-42132879)
chr4 (18-93)||(28279870-28279946)
chr4 (17-99)||(44633189-44633271)
chr4 (15-51)||(48400672-48400708)
[»] chr2 (31 HSPs)
chr2 (13-111)||(44424243-44424342)
chr2 (15-111)||(31592580-31592678)
chr2 (18-111)||(25604394-25604488)
chr2 (13-103)||(29937903-29937993)
chr2 (30-111)||(12949943-12950026)
chr2 (18-101)||(19515914-19515996)
chr2 (15-103)||(40710607-40710695)
chr2 (36-99)||(9937070-9937133)
chr2 (13-88)||(44024746-44024821)
chr2 (18-102)||(2756707-2756792)
chr2 (17-78)||(4794605-4794666)
chr2 (21-94)||(8385111-8385184)
chr2 (15-111)||(2048322-2048421)
chr2 (13-101)||(5425885-5425973)
chr2 (15-112)||(10069562-10069662)
chr2 (15-111)||(6972519-6972617)
chr2 (57-111)||(32556244-32556299)
chr2 (15-73)||(4283038-4283096)
chr2 (18-101)||(1908484-1908568)
chr2 (10-101)||(18181203-18181295)
chr2 (18-73)||(9724911-9724966)
chr2 (18-73)||(24356144-24356199)
chr2 (17-111)||(314459-314556)
chr2 (36-87)||(34235094-34235144)
chr2 (19-73)||(31348545-31348599)
chr2 (15-94)||(7931493-7931573)
chr2 (19-111)||(8550620-8550715)
chr2 (15-72)||(14384298-14384355)
chr2 (18-51)||(26273792-26273825)
chr2 (13-50)||(41436107-41436144)
chr2 (20-76)||(27001594-27001650)
[»] chr7 (33 HSPs)
chr7 (15-101)||(34064245-34064331)
chr7 (18-112)||(37264346-37264441)
chr7 (19-103)||(40023716-40023800)
chr7 (15-82)||(14648929-14648996)
chr7 (13-94)||(10355732-10355814)
chr7 (15-87)||(3667882-3667954)
chr7 (18-101)||(28333204-28333287)
chr7 (15-88)||(37496401-37496474)
chr7 (15-101)||(2849285-2849372)
chr7 (18-73)||(25778777-25778832)
chr7 (27-87)||(11730830-11730889)
chr7 (15-111)||(43007924-43008023)
chr7 (18-111)||(32776016-32776112)
chr7 (27-88)||(32346560-32346621)
chr7 (18-111)||(32971996-32972092)
chr7 (18-101)||(45218148-45218232)
chr7 (34-111)||(6697130-6697209)
chr7 (18-93)||(27337871-27337947)
chr7 (18-101)||(38181864-38181948)
chr7 (27-111)||(8150001-8150087)
chr7 (30-101)||(9658883-9658954)
chr7 (13-87)||(19687987-19688062)
chr7 (15-101)||(36070135-36070222)
chr7 (10-80)||(1099098-1099168)
chr7 (10-80)||(1101955-1102025)
chr7 (15-77)||(9602891-9602953)
chr7 (15-77)||(9830462-9830524)
chr7 (10-76)||(40590841-40590907)
chr7 (10-51)||(6591582-6591623)
chr7 (17-73)||(24288455-24288511)
chr7 (13-73)||(27242749-27242809)
chr7 (22-78)||(31549636-31549692)
chr7 (18-73)||(38589767-38589822)
[»] chr3 (26 HSPs)
chr3 (15-111)||(9218175-9218273)
chr3 (15-111)||(39329729-39329827)
chr3 (19-101)||(30261492-30261574)
chr3 (18-101)||(48409617-48409701)
chr3 (18-94)||(42547104-42547180)
chr3 (17-87)||(31650943-31651013)
chr3 (18-78)||(21296517-21296577)
chr3 (15-76)||(41287292-41287353)
chr3 (18-99)||(44219027-44219107)
chr3 (18-73)||(1334800-1334855)
chr3 (15-51)||(46194247-46194283)
chr3 (19-101)||(51164986-51165069)
chr3 (12-71)||(53754085-53754144)
chr3 (15-94)||(3862170-3862249)
chr3 (13-87)||(46627929-46628004)
chr3 (19-76)||(29858881-29858938)
chr3 (17-94)||(53583558-53583635)
chr3 (18-51)||(1923123-1923156)
chr3 (27-92)||(8764380-8764445)
chr3 (27-88)||(8769282-8769343)
chr3 (27-80)||(45746408-45746461)
chr3 (19-76)||(49122150-49122207)
chr3 (13-50)||(52325205-52325242)
chr3 (15-71)||(8498284-8498340)
chr3 (28-108)||(45267205-45267285)
chr3 (57-108)||(47684814-47684866)
[»] chr6 (12 HSPs)
chr6 (18-88)||(16126244-16126314)
chr6 (18-111)||(15371842-15371937)
chr6 (18-101)||(31075915-31075998)
chr6 (13-101)||(15321216-15321304)
chr6 (15-103)||(15355605-15355693)
chr6 (27-109)||(20383887-20383971)
chr6 (18-88)||(33017947-33018018)
chr6 (19-76)||(3874066-3874123)
chr6 (18-101)||(31265812-31265896)
chr6 (18-101)||(33921459-33921543)
chr6 (17-111)||(4238453-4238548)
chr6 (15-51)||(15351424-15351460)
[»] scaffold0576 (1 HSPs)
scaffold0576 (15-103)||(595-683)
[»] scaffold0155 (1 HSPs)
scaffold0155 (13-68)||(7978-8033)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-103)||(352449-352535)
[»] scaffold0086 (1 HSPs)
scaffold0086 (15-73)||(5848-5906)
[»] scaffold0020 (1 HSPs)
scaffold0020 (19-107)||(171260-171349)
[»] scaffold0262 (1 HSPs)
scaffold0262 (13-111)||(12414-12515)
[»] scaffold0685 (1 HSPs)
scaffold0685 (15-87)||(6404-6477)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-94)||(229856-229933)
[»] scaffold0009 (1 HSPs)
scaffold0009 (15-51)||(220023-220059)


Alignment Details
Target: chr1 (Bit Score: 151; Significance: 9e-80; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 255 - 412
Target Start/End: Complemental strand, 25983457 - 25983299
Alignment:
Q  255 gagagagcgtgtttttagttttgtgtctgaaatatgatacgaggttaaaataaattcaaatgaaaaaa-ggctcccgcgtgaaagggtaataaaatcacg 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25983457 gagagagcgtgtttttagttttgtgtctgaaatatgatacgaggttaaaataaattcaaatgaaaaaaaggctcccgcgtgaaagggtaataaaatcacg 25983358  T
Q  354 tttgtcctaagtcaaaactccaaaaacccatttctctcttctttcttcttcatcatttc 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25983357 tttgtcctaagtcaaaactccaaaaacccatttctctcttctttcttcttcatcatttc 25983299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 25983702 - 25983612
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    |||||||||||||||| |||||||||||||||| ||  ||||||||||||||| | |||||||||||||||||||||  ||||||||||||||    
T  25983702 aattcaacatattctattttgcatttatgataaaaatgaatgcaccaatacttaataagacacttaaaacaatttta--ctctttcacttata 25983612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 2571393 - 2571490
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcacttata 111  Q
    ||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||||| |||||||||| ||||| |||||  |||||||||| |||||    
T  2571393 tctcaattcaatatattctactttgcatttaggataagaaataatgcaccaatacttaacaagacactcaaaactattttctctctctttcatttata 2571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 29225786 - 29225850
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 82  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  29225786 caattcaatatattctactttgcatttatgataagaatgaatgcaccaatacttgacaagacact 29225850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 34813945 - 34814034
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctct 101  Q
    ||||||||||||| |||||||||||||||||||||||||  | |||||||| ||||||| ||||| ||||||||||| ||||| ||||||    
T  34813945 attctcaattcaatatattctactttgcatttatgataatgataaatgcactaatacttaacaagaacacttaaaactatttttctctct 34814034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 103
Target Start/End: Complemental strand, 19349072 - 19348985
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||||||| |||||||| ||||||||||||||||   ||| ||||||||||||||||||||| || ||||||||||| || |||||    
T  19349072 tctcaattcaatatattctattttgcatttatgataattggaa-tgcaccaatacttgacaagacgctcaaaacaatttttctatcttt 19348985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 45305883 - 45305970
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctt 102  Q
    ||||||||||| ||||||||||||||||||||||||| |||| ||||||  |||||||||||||||||| ||||  ||||| |||||||    
T  45305883 tctcaattcaatatattctactttgcatttatgataatgaag-aatgcataaatacttgacaagacactcaaaattattttcctctctt 45305970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 3718927 - 3718840
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    ||||||||||| ||||| |||||| ||||||||||||  | |||||||| |||||||||||||| |||||||||| ||||| ||||||    
T  3718927 tctcaattcaatatattatactttacatttatgataatgataaatgcacaaatacttgacaagagcacttaaaactatttttctctct 3718840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Complemental strand, 25819424 - 25819335
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttc 104  Q
    |||||||| || || ||||||||||||||||||||||| || ||||||||||||  |||||| ||||| ||||  ||||| |||||||||    
T  25819424 tctcaatttaatattttctactttgcatttatgataaggaggaatgcaccaataaatgacaaaacactcaaaattatttttctctctttc 25819335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 31798448 - 31798545
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 111  Q
    ||||||||||| |||||||||||||||||||||||||  |  |||||||||||| |||| || | |||| ||||| || || ||||||||||||||||    
T  31798448 tctcaattcaatatattctactttgcatttatgataaagaataatgcaccaatagttgataagggcactcaaaaccatatttctctctttcacttata 31798545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 39420612 - 39420703
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaa---tgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    |||||||||||||||| || |||||||||||||| |||| || |||   |||||||||||||||||||||||| ||||  ||||| ||||||    
T  39420612 attctcaattcaacatgttttactttgcatttataataaaaaaaaacaatgcaccaatacttgacaagacactcaaaattatttttctctct 39420703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 27932911 - 27932849
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaag 77  Q
    ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||    
T  27932911 tctcaattcaatatattctactttgcatttatgataaagaagaa-tgcaccaatagttgacaag 27932849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 35622854 - 35622779
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattt 93  Q
    |||||||| |||||||||||||||||||| | |||||| |||||| ||||||| ||||||||| | ||||| ||||    
T  35622854 caattcaatatattctactttgcatttatcacaagaaggaatgcatcaatactcgacaagacattcaaaactattt 35622779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Complemental strand, 37925324 - 37925261
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 78  Q
    ||||||||||| |||||||||||||||||||||||||  | ||||||||||||| |||| ||||    
T  37925324 tctcaattcaatatattctactttgcatttatgataaagaaaaatgcaccaataattgataaga 37925261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 21304880 - 21304786
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttta-ctctctttcacttata 111  Q
    ||||||| ||||| ||||||  |||||||||||  | ||||||| ||||||||||| |||||||| |||||||||||| |||||||||| |||||    
T  21304880 aattcaatatattatactttatatttatgataaagaaaaatgcatcaatacttgacaaagacactcaaaacaattttatctctctttcatttata 21304786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 99
Target Start/End: Original strand, 25842627 - 25842713
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 99  Q
    ||||||||| ||| |||||||||||| |||||||||||| |  ||||| |||||||||| | |||||||| ||||| ||||| ||||    
T  25842627 attctcaatgcaatatattctactttacatttatgataatagaaaatgtaccaatacttaataagacactcaaaactatttttctct 25842713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 27831879 - 27831969
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcact 107  Q
    |||||||| || ||| ||||||||||||||||||     |||||||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  27831879 caattcaatatcttccactttgcatttatgataatggtgaatgcaccaatacttgacaagggcacttaaaactatttttctctctttcact 27831969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 37281072 - 37281014
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||||| |||||||||||| |||||||||||| ||  ||||||||||||||||||||    
T  37281072 caattcaatatattctactttacatttatgataaaaaagaatgcaccaatacttgacaa 37281014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 49662831 - 49662738
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    ||||| || ||||||||||||| ||||||||||| | | ||| ||||||||||||| ||||  || ||||  ||||| ||||||||||||||||    
T  49662831 caatttaatatattctactttgaatttatgataataggtaatacaccaatacttgagaagatgctcaaaatcatttttctctctttcacttata 49662738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 30903299 - 30903232
Alignment:
Q  21 ttcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    ||||| |||||||||||||||||||||||||    |||||||| ||||||| |||||||||| |||||    
T  30903299 ttcaatatattctactttgcatttatgataatggaaaatgcacaaatacttaacaagacactcaaaac 30903232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 27391379 - 27391476
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcacttata 111  Q
    ||||||||| |||||| |||||||||||||||||| |  ||||| |||||||||| | |||| |||||||||  ||||| ||||||  ||||||||||    
T  27391379 tcaattcaatatattccactttgcatttatgataatagtaaatgaaccaatacttaataagagcacttaaaatcatttttctctctccttcacttata 27391476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 29225483 - 29225425
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||||| |||||||||||| |||||||||||| ||  ||||||||||||||| ||||    
T  29225483 caattcaatatattctactttccatttatgataaaaaagaatgcaccaatacttaacaa 29225425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 16040110 - 16040194
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    |||| ||| |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||||||||| ||||| ||||||    
T  16040110 caatacaatatattctactttacatttatgataaagaag-aatgaaccaatacttaacaaagacacttaaaaccatttttctctct 16040194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 34877165 - 34877088
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaatttt 94  Q
    |||||||| |||||| |||||||||||||||||| |  |||||||| |||| || || ||| ||||||||||||||||    
T  34877165 caattcaatatattcaactttgcatttatgataatagaaaatgcacgaatatttaaccagagcacttaaaacaatttt 34877088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 44580558 - 44580643
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 111  Q
    ||||||||||||||||||||||||| || |||||||| |||| |||| || | ||||  || | ||||| ||||||||||||||||    
T  44580558 atattctactttgcatttatgataaaaaaaaatgcacaaatagttgataaggtcactctaacccatttttctctctttcacttata 44580643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 2886201 - 2886237
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  2886201 tctcaattcaatatattctactttgcatttatgataa 2886237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 27210045 - 27209958
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    ||||||||||| ||||||| |||| |||||||||||| |||||| |||||||||||||| | |||||||| ||||  ||||| ||||||    
T  27210045 tctcaattcaatatattctcctttacatttatgataaagaagaa-tgcaccaatacttgtcaaagacactcaaaatcatttttctctct 27209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 29756217 - 29756162
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    |||||||| ||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  29756217 caattcaatatattctactttgcatttatgataaagaagaa-tgcaccaatagttga 29756162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 33149303 - 33149339
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  33149303 tctcaattcaatatattctactttgcatttatgataa 33149339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 40061839 - 40061927
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctctt 102  Q
    ||||||||||| |||||||| ||||||||||||||||  | ||||| | |||||||||| ||| ||| ||||||  ||||| |||||||    
T  40061839 tctcaattcaatatattctaatttgcatttatgataatgaaaaatgtaacaatacttgataagaacatttaaaatcatttttctctctt 40061927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 24131475 - 24131381
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 111  Q
    |||||||| ||||| ||||||||||||||||| |||||| |||||||| ||| |||| || | || | ||||| ||||| ||||||||||||||||    
T  24131475 caattcaatatattatactttgcatttatgataaagaag-aatgcacctatagttgataagggcattcaaaaccatttttctctctttcacttata 24131381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 26924198 - 26924140
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||| ||||    
T  26924198 tctcaattcaatatattatactttgcatttatgataaagaagaa-tgcaccaatagttga 26924140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 40754491 - 40754393
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaata-cttgacaa-gacacttaaaacaattttactctctttcacttata 111  Q
    |||||||| || ||||||||||||||||||||||||| |||||| ||||||||||  |||| || | |||| ||||| ||||  ||||||||||||||||    
T  40754491 tctcaatttaatatattctactttgcatttatgataaagaagaa-tgcaccaataggttgataagggcactcaaaaccatttctctctctttcacttata 40754393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 46363489 - 46363431
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    ||||||||||| ||||| ||||||||||||||||||| |||||| |||||||||| ||||    
T  46363489 tctcaattcaatatattttactttgcatttatgataaagaagaa-tgcaccaatagttga 46363431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 14352599 - 14352676
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaatttt 94  Q
    |||||||| ||||||||||||  ||||| ||| |||||| |||||||||||||||||| |||||||| ||||| |||||    
T  14352599 caattcaatatattctactttatatttacgataaagaag-aatgcaccaatacttgacaaagacactcaaaaccatttt 14352676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 29678859 - 29678929
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    |||||||| |||||| |||||||||||| ||||| ||  |||||| |||||||| |||| ||||| |||||    
T  29678859 caattcaatatattcaactttgcatttacgataataatgaatgcatcaatacttaacaaaacactcaaaac 29678929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 102
Target Start/End: Original strand, 49944981 - 49945050
Alignment:
Q  34 actttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctctt 102  Q
    ||||||||||||||||| ||||| ||||||| ||||||| |||||| |||||||||| ||||| |||||||    
T  49944981 actttgcatttatgatagagaag-aatgcacaaatacttaacaagagcacttaaaaccatttttctctctt 49945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 50926789 - 50926838
Alignment:
Q  27 atattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaa 76  Q
    |||||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  50926789 atattctactttacatttatgataaagaag-aatgcaccaatacttgacaa 50926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 49
Target Start/End: Complemental strand, 52146733 - 52146699
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat 49  Q
    ||||||||| |||||||||||||||||||||||||    
T  52146733 tctcaattcgacatattctactttgcatttatgat 52146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 52382464 - 52382391
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaa 87  Q
    ||||||||||| ||||| |||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||    
T  52382464 tctcaattcaatatattttactttacatttatgataaagaagaa-tgcatcaatacttgactaagacactcaaaa 52382391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 11425944 - 11425860
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    |||| ||| |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||| ||||| ||||| ||||||    
T  11425944 caatacaatatattctactttacatttatgataaagaag-aatggaccaatacttaacaaagacactcaaaactatttttctctct 11425860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 25869711 - 25869780
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 82  Q
    ||||||||| ||| |||||||||||| |||||||||||| |  ||||| | |||||||| | ||||||||    
T  25869711 attctcaatgcaatatattctactttacatttatgataatagaaaatgtatcaatacttaataagacact 25869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 36232864 - 36232780
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    |||||||| ||||||||||||  ||||||||||| |||||| |||||||||||||| | |||||||| ||||  ||||| ||||||    
T  36232864 caattcaatatattctactttatatttatgataaagaagaa-tgcaccaatacttgtcaaagacactcaaaatcatttttctctct 36232780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 2246355 - 2246319
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  2246355 tctcaattcaacatcttctactttacatttatgataa 2246319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 10587659 - 10587623
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  10587659 tctcaattcaatatattctattttgcatttatgataa 10587623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 12267706 - 12267651
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||||| |||||| || ||||||||||||    
T  12267706 caattcaatatattctactttacatttatgataaagaagaa-tgtaccaatacttga 12267651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 26583761 - 26583816
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||| |||||||||||||| |||||| |||||||||||| ||||    
T  26583761 caattcaatatattctattttgcatttatgataaagaag-aatgcaccaatagttga 26583816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 37495862 - 37495917
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| ||||||| || |||||| |||||||||||||||||    
T  37495862 caattcaatatattctactttacatttataataaagaag-aatgcaccaatacttga 37495917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 50
Target Start/End: Original strand, 43895872 - 43895912
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgata 50  Q
    |||| ||||||||||| |||||| |||||||||||||||||    
T  43895872 attactctcaattcaatatattcaactttgcatttatgata 43895912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 2195501 - 2195596
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 111  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||||| ||||| |||||   ||||||||||||||||    
T  2195501 caattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctctctttcacttata 2195596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 10728996 - 10728920
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    |||||||| |||||| |||||||||||||||||||||  ||||||| ||||||| |||||||||| ||||| |||||    
T  10728996 caattcaatatattccactttgcatttatgataagaaagaatgcacaaatacttaacaagacactcaaaactatttt 10728920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 7258441 - 7258359
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactct 99  Q
    |||||||| |||||||| ||||||||||||||||  | ||||||||||||||||||||||| | |||||||| ||||| ||||    
T  7258441 caattcaatatattctagtttgcatttatgataatgataaatgcaccaatacttgacaagagcgcttaaaaccatttttctct 7258359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 27868404 - 27868322
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 94  Q
    ||||||||||||| |||||||||||||||||||||||||  | ||||| | |||||||||||||| |||| |||||| |||||    
T  27868404 attctcaattcaatatattctactttgcatttatgataatgataaatggatcaatacttgacaagaacacgtaaaaccatttt 27868322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 14689993 - 14690089
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt--actctctttcacttata 111  Q
    |||||||| ||||||||||||||||||||||||| ||  |||||||||||| |||| || |||||| ||||| |||||   ||||||||||||||||    
T  14689993 caattcaatatattctactttgcatttatgataaaaaagaatgcaccaatagttgataaggacactcaaaaccatttttctctctctttcacttata 14690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 5878303 - 5878217
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    ||||||||||| |||||||||||| ||||||||||||| || |||| || |||||||||| |||||| ||||||| ||||| ||||||    
T  5878303 tctcaattcaatatattctactttacatttatgataagtag-aatgaactaatacttgacaaagacatttaaaaccatttttctctct 5878217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 15020705 - 15020754
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaat 67  Q
    |||||||| |||||||||||||||| |||||||||||| |||||||||||    
T  15020705 caattcaatatattctactttgcatgtatgataagaaggaatgcaccaat 15020754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 87
Target Start/End: Complemental strand, 15559203 - 15559134
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaa 87  Q
    ||||||| |||||||||||||||||||||||||    |||| ||||||||||||||||| ||||||||||    
T  15559203 aattcaatatattctactttgcatttatgataatggtaaatacaccaatacttgacaagaacacttaaaa 15559134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 1230439 - 1230384
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatactt 71  Q
    ||||||||||| |||||||||||||||||||||||||   |||||||||||||||||    
T  1230439 tctcaattcaatatattctactttgcatttatgataa-tggaaatgcaccaatactt 1230384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 27973767 - 27973683
Alignment:
Q  11 ttattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 94  Q
    |||||| ||||||||  ||||||||||||||||||||||||    ||||| | |||||||||||||| ||||||||||| |||||    
T  27973767 ttattcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttt 27973683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 28031036 - 28030952
Alignment:
Q  11 ttattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 94  Q
    |||||| ||||||||  ||||||||||||||||||||||||    ||||| | |||||||||||||| ||||||||||| |||||    
T  28031036 ttattcccaattcaatgtattctactttgcatttatgataatggtaaatggatcaatacttgacaagaacacttaaaaccatttt 28030952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 2797073 - 2797167
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactc--tctttcacttat 110  Q
    |||||||| |||||||||||||||||||||||||| |  |||||| || ||  |||||| ||||| ||||| ||||| |||  ||||||||||||    
T  2797073 caattcaatatattctactttgcatttatgataagtaagaatgcatcagtaaatgacaaaacactcaaaaccatttttctctttctttcacttat 2797167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 29451380 - 29451475
Alignment:
Q  16 ctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    |||||||||| ||||| ||||||| ||||||||||||||  ||| ||| |||||||||||| |   | ||||| ||||| |||||||||| |||||    
T  29451380 ctcaattcaatatattatactttggatttatgataagaaagaatacactaatacttgacaaaatgttcaaaactatttttctctctttcatttata 29451475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 14748785 - 14748747
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  14748785 attctcaattcaatatattctactttgcatttatgataa 14748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40077823 - 40077766
Alignment:
Q  19 aattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa 76  Q
    ||||||| |||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  40077823 aattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttgacaa 40077766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 42412457 - 42412361
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcacttata 111  Q
    |||||||| |||||| |||||||||||||||||| | || ||||||||||||  |||||||| |||||||||| ||||| ||||||  ||||||||||    
T  42412457 caattcaatatattccactttgcatttatgataatggag-aatgcaccaatatatgacaagagcacttaaaactatttttctctctcattcacttata 42412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 5392082 - 5392166
Alignment:
Q  18 caattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    |||||||| |||||| |||||||||||||||||  | || |||||||||||||||||||| | |||||||||| ||||| ||||||    
T  5392082 caattcaatatattccactttgcatttatgatagtggag-aatgcaccaatacttgacaaaagcacttaaaaccatttttctctct 5392166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 39998193 - 39998280
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga-caagacacttaaaacaattttactctct 101  Q
    ||||||||||| |||||||||||| |||||||||| |||||| ||||| | |||||||||  |||||||||||||  ||||| ||||||    
T  39998193 tctcaattcaatatattctactttacatttatgataaagaag-aatgctcaaatacttgataaagacacttaaaatcatttttctctct 39998280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 26570231 - 26570168
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||||||||  || ||||||||||||||||||  |  |||||| |||||||||||||    
T  26570231 attctcaattcaacatcctccactttgcatttatgataatgacgaatgcatcaatacttgacaa 26570168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 886527 - 886489
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  886527 attctcaattcgatatattctactttgcatttatgataa 886489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 17005978 - 17006036
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||||| |||||||||||||||||||||||||  | || ||||| |||| |||||||    
T  17005978 caattcaatatattctactttgcatttatgataaagataattgcacaaatatttgacaa 17006036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 17571270 - 17571212
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||||| |||||||||||||||||||||||||  | || ||||| |||| |||||||    
T  17571270 caattcaatatattctactttgcatttatgataaagataattgcacaaatatttgacaa 17571212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 26677115 - 26677203
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaa---ttttactctctttcacttata 111  Q
    |||||||||||||||||||||||||     |||||||||||| || |||| ||||||||||||||   |||  ||||||||||||||||    
T  26677115 atattctactttgcatttatgataatggtgaatgcaccaatattttacaatgacacttaaaacaaatttttctctctctttcacttata 26677203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 27875221 - 27875139
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaatttt 94  Q
    |||| ||||||||  |||| ||||||||||||||||||| |  ||||| | |||||||||||||| ||| ||||||| |||||    
T  27875221 attcccaattcaatgtattatactttgcatttatgataatagtaaatggatcaatacttgacaagaacatttaaaaccatttt 27875139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 2875159 - 2875126
Alignment:
Q  19 aattcaacatattctactttgcatttatgataag 52  Q
    ||||||| ||||||||||||||||||||||||||    
T  2875159 aattcaatatattctactttgcatttatgataag 2875126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 8418379 - 8418318
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||  |||||||||||| ||||||||||||  |  |||||| |||||||||||||    
T  8418379 tctcaattcagtatattctactttacatttatgataaagaataatgcatcaatacttgacaa 8418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 25174662 - 25174609
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaata 68  Q
    ||||||||||| |||||||||||||||||||| ||||  |  ||||||||||||    
T  25174662 tctcaattcaatatattctactttgcatttataataaagaataatgcaccaata 25174609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28791341 - 28791425
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttg-acaagacacttaaaacaattttactctct 101  Q
    |||||||| |||||||| ||| |||||||||| |||||| |||||||||||||||| | ||| |||| ||||| ||||| ||||||    
T  28791341 caattcaatatattctagtttacatttatgataaagaag-aatgcaccaatacttgaaaaaggcactcaaaactatttttctctct 28791425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 44225986 - 44225937
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||| ||||    
T  44225986 atattctactttgcatttatgatgaaaatgaatgcaccaatacttaacaa 44225937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 11637170 - 11637206
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  11637170 tctcaattcaatatattctactttacatttatgataa 11637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 29730961 - 29730886
Alignment:
Q  27 atattctactttgcatttatgata-agaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctct 101  Q
    ||||||||||||||||||||||||  | || ||||||||||||||| ||||| ||||||||||| | ||| ||||||    
T  29730961 atattctactttgcatttatgatagtggag-aatgcaccaatacttaacaagaacacttaaaaccacttttctctct 29730886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 36012031 - 36011972
Alignment:
Q  54 agaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 111  Q
    ||||||||| ||||||||||||||||||| ||||| ||||  |  |||||||||||||||    
T  36012031 agaaatgcatcaatacttgacaagacactcaaaaccatttctctttctctttcacttata 36011972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 41726554 - 41726609
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||| ||||||||||    
T  41726554 caattcaatatattctactttacatttatgataaagaag-aatgcaacaatacttga 41726609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 41759704 - 41759645
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaag 77  Q
    |||||||| ||||| ||||||| ||||||||||| |||||| |||||||||| ||||||||    
T  41759704 caattcaatatattttactttgtatttatgataaagaagaa-tgcaccaataattgacaag 41759645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 35988667 - 35988762
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctc--tttcacttata 111  Q
    |||||||| |||||| |||||||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| |||||  |||||||||||    
T  35988667 caattcaatatattcaactttgcatttatgataagaatgaatgcaccaatacttgacaacacacttaaaactatttttctctctgtttcacttata 35988762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 39212626 - 39212534
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    |||||||| ||||||||||||||||||||||||| |  | ||||||||||||||||||||| ||||   ||||||||| ||||||||||||||||    
T  39212626 caattcaatatattctactttgcatttatgataatgggggaatgcaccaatacttgacaaggcact--caacaatttttctctctttcacttata 39212534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 25111223 - 25111132
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 108  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  25111223 caattcaatatattctactttacatttatgataaagaagaa-tgcagcaatacttgacaaagacactcaaaactatttttctctctttcactt 25111132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 25170314 - 25170223
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 108  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  25170314 caattcaatatattctactttacatttatgataaagaagaa-tgcagcaatacttgacaaagacactcaaaactatttttctctctttcactt 25170223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 72171 - 72128
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatact 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  72171 atattctactttgcatttatgataagaagaaatgcaccaatact 72128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 6629451 - 6629375
Alignment:
Q  34 actttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    ||||||||||||| |||| ||  |||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||    
T  6629451 actttgcatttataataaaaaagaatgcaccaatacttgacaagacactcaaaactatttt-ctctctttcatttata 6629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 7311254 - 7311169
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctcttt 103  Q
    ||||||| |||||||||||||||||||||||||    |||||||| ||||||||| |||| |||||||||| ||||| ||||||||    
T  7311254 aattcaatatattctactttgcatttatgataatggtaaatgcacaaatacttgataagagcacttaaaaccatttttctctcttt 7311169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 5072983 - 5073059
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||| |||| || | |||||||| ||||| |||||    
T  5072983 caattcaatatattttactttacatttatgataagaaaaaatgcacaaatatttaataagacactcaaaactatttt 5073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 25108606 - 25108697
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 108  Q
    |||||||| ||||| |||||| |||||||||| |||||| |||||| |||||||| || |||||||| ||||| ||||| |||||||||||||    
T  25108606 caattcaatatattatactttacatttatgataaagaag-aatgcagcaatacttaacaaagacactcaaaactatttttctctctttcactt 25108697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 25167698 - 25167789
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctctttcactt 108  Q
    |||||||| ||||| |||||| |||||||||| |||||| |||||| |||||||| || |||||||| ||||| ||||| |||||||||||||    
T  25167698 caattcaatatattatactttacatttatgataaagaag-aatgcagcaatacttaacaaagacactcaaaactatttttctctctttcactt 25167789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 36006967 - 36006882
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctcttt 103  Q
    |||||||  |||||||||||| |||||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||| ||||||||    
T  36006967 caattcagtatattctactttacatttatgataaagaagaa-tgcacaaatacttgacaaagacacttaaaaccatttt-ctctcttt 36006882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 5147570 - 5147474
Alignment:
Q  19 aattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactc--tctttcacttatat 112  Q
    ||||||| ||||||||||||||||||||||||| |||||| |||||||||| |||| || |||||| ||||  ||||| |||  ||||||||||||||    
T  5147570 aattcaatatattctactttgcatttatgataaagaagaa-tgcaccaatagttgataaggacactcaaaatcatttttctctttctttcacttatat 5147474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 8369772 - 8369687
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    ||||||||| |||||| |||||||||||||||||  | || ||||||||||||||| |||||| || ||||||||||||| ||||||    
T  8369772 tcaattcaatatattccactttgcatttatgatagtggag-aatgcaccaatacttaacaagagcatttaaaacaatttttctctct 8369687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 13087819 - 13087762
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||||||||||||||||||||  || |||||||||||| ||||    
T  13087819 tctcaattcaatatattctactttgcatttatgataaagag-aatgcaccaatagttga 13087762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 16926166 - 16926070
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttact--ctctttcacttata 111  Q
    |||||||| |||||||||||| |||||||||||| |||||| ||||||||||||| || ||| |||| ||||| ||||| ||  ||||||||||||||    
T  16926166 caattcaatatattctactttccatttatgataaagaagaa-tgcaccaatacttaacgaaggcactcaaaaccatttttctcactctttcacttata 16926070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 22982986 - 22983072
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacac-ttaaaacaattttactctctttcacttatat 112  Q
    ||||| |||||||||||||||||||| || ||||||| ||||||||| ||||| | |||||| | |||  |||||||||| ||||||    
T  22982986 atattttactttgcatttatgataagcaggaatgcactaatacttgaaaagactctttaaaatattttccctctctttcatttatat 22983072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 111
Target Start/End: Complemental strand, 42158725 - 42158628
Alignment:
Q  14 ttctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac-aattttactctctttcacttata 111  Q
    |||||||||||||||||| |||||||||||||||||||    ||||| |||||||||| | || ||||| |||||  |||||  |||||||||||||||    
T  42158725 ttctcaattcaacatattttactttgcatttatgataatggaaaatg-accaatacttaagaacacactcaaaactcatttttttctctttcacttata 42158628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 4044552 - 4044497
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||    
T  4044552 caattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttga 4044497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 15898221 - 15898257
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  15898221 tctcaattcaatatattctactttgcatttatgataa 15898257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 17699358 - 17699430
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 82  Q
    |||| ||||||||||| ||||| ||| || |||||||||||   ||||||||| ||||| |||||||||||||    
T  17699358 attactctcaattcaatatattataccttacatttatgatattgagaaatgcatcaataattgacaagacact 17699430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 32659846 - 32659918
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    ||||||||||| ||||| |||||||||||||| |||| ||||||||||  || | || |||||||||| ||||    
T  32659846 tctcaattcaatatattatactttgcatttataataataagaaatgcataaacatttaacaagacactcaaaa 32659918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 4475279 - 4475338
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag 77  Q
    ||||||||||| ||| ||||||||||||||||||     |||||||||||||||||||||    
T  4475279 caattcaacattttccactttgcatttatgataatggtgaatgcaccaatacttgacaag 4475338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 13016438 - 13016384
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||||||||||||||||  || |||||||||||| ||||    
T  13016438 caattcaatatattctactttgcatttatgataaagag-aatgcaccaatagttga 13016384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 18319960 - 18320019
Alignment:
Q  28 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    ||||||||||||||||||| |||| |  |||||||| ||||||||| |||||||| ||||    
T  18319960 tattctactttgcatttataataatagaaaatgcactaatacttgataagacactcaaaa 18320019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 25344818 - 25344780
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  25344818 attctcaattcaatatattctactttacatttatgataa 25344780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 792010 - 792067
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||| |||||||| ||||||||||| ||||  || ||||||||||||||| ||||    
T  792010 aattcaatatattctattttgcatttataataaagaggaatgcaccaatacttaacaa 792067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 5357892 - 5357808
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    |||| ||| |||||||||||| |||||||||| |||||| |||| |||||||||| || |||||||| ||||| ||||| ||||||    
T  5357892 caatacaatatattctactttacatttatgataaagaag-aatgaaccaatacttaacaaagacactcaaaaccatttttctctct 5357808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 7179560 - 7179527
Alignment:
Q  13 attctcaattcaacatattctactttgcatttat 46  Q
    ||||||||||||| ||||||||||||||||||||    
T  7179560 attctcaattcaatatattctactttgcatttat 7179527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 33498562 - 33498509
Alignment:
Q  25 acatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 78  Q
    ||||||||||||||||||||||| |||    ||||||| |||||||||||||||    
T  33498562 acatattctactttgcatttatgttaatggtaaatgcagcaatacttgacaaga 33498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 38978934 - 38978987
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaata 68  Q
    |||||||| || |||||||||||||||||||||||||  || |||| |||||||    
T  38978934 tctcaatttaatatattctactttgcatttatgataaagaggaatgtaccaata 38978987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15564966 - 15564930
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    |||||||| || |||||||||||||||||||||||||    
T  15564966 tctcaatttaatatattctactttgcatttatgataa 15564930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 70
Target Start/End: Original strand, 16954898 - 16954949
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatact 70  Q
    |||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||    
T  16954898 caattcaatatattctattttacatttatgataaaaag-aatgcaccaatact 16954949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 35646163 - 35646080
Alignment:
Q  19 aattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    ||||||| |||||| |||||||||||||||||  | || ||||||||||||||| |||||| |||||||||  ||||| ||||||    
T  35646163 aattcaatatattccactttgcatttatgatagtggag-aatgcaccaatacttaacaagatcacttaaaatcatttttctctct 35646080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 39061028 - 39060996
Alignment:
Q  19 aattcaacatattctactttgcatttatgataa 51  Q
    ||||||| |||||||||||||||||||||||||    
T  39061028 aattcaatatattctactttgcatttatgataa 39060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 46958752 - 46958848
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcacttata 111  Q
    ||||||||||| |||||||||||||| |||||||||||||| |||||||| |||||| |||||||||| ||||| ||||  || |||||||||||||    
T  46958752 tctcaattcaatatattctactttgcgtttatgataagaaggaatgcaccgatacttaacaagacactcaaaactatttctctatctttcacttata 46958848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 38615037 - 38614961
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    |||||||| ||||| || ||||||||||||||||||| |||||||||||||||| |||||||||| ||||| |||||    
T  38615037 caattcaatatattttattttgcatttatgataagaaaaaatgcaccaatacttaacaagacactcaaaactatttt 38614961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 111
Target Start/End: Original strand, 49448869 - 49448970
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct--ttcactta 109  Q
    ||||||||||||| ||||| ||||||||||||||||||| |   ||||||| |||||||||||||| |||||||||| ||||| ||||||  ||||||||    
T  49448869 attctcaattcaatatattatactttgcatttatgataatagagaatgcacaaatacttgacaagagcacttaaaaccatttttctctctccttcactta 49448968  T
Q  110 ta 111  Q
    ||    
T  49448969 ta 49448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 18872717 - 18872662
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 82  Q
    |||||||| ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  18872717 atattctattttgcatttatgataaggagaaatgcatcaatacttgataagacact 18872662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 22020589 - 22020527
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| || |||| |||||||    
T  22020589 attctcaattcaatatattctactttgcatttatgataagaa-aaatgtacaaatagttgacaa 22020527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 21954509 - 21954427
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttt 94  Q
    |||| |||||||  ||||| |||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| ||| ||||    
T  21954509 attcacaattcagtatattttactttacatttatgataagaagaaatgcatcaatacatgacaaagacacttaagacattttt 21954427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 111
Target Start/End: Complemental strand, 29990547 - 29990451
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcacttata 111  Q
    ||||||||| |||||| |||||  |||||||||| |||  |||||| ||||||||||||||||||| ||| | |  |||| ||||||||||||||||    
T  29990547 tcaattcaatatattcaactttatatttatgatatgaaagaatgcatcaatacttgacaagacactcaaatctatttttttctctctttcacttata 29990451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 38838690 - 38838735
Alignment:
Q  54 agaaatgcaccaatacttgacaagacacttaaaacaattttactct 99  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  38838690 agaaatgcaccaatacttgacaacacacttaaaacaatttttctct 38838735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 22872465 - 22872375
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa--ga-cacttaaaacaattttactctctt 102  Q
    ||||||||||| |||||| |||||||||||||||||| | || ||||||||||||||||||||  || |||||||||| ||||| |||||||    
T  22872465 tctcaattcaatatattccactttgcatttatgataatggag-aatgcaccaatacttgacaaacgagcacttaaaaccatttttctctctt 22872375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 38319941 - 38319999
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    ||||||||||| ||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  38319941 tctcaattcaatatattctactttgcatttatgataaagaag-aatgcaccaatagttga 38319999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 39052978 - 39052920
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||    
T  39052978 tctcaattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttga 39052920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 32949926 - 32949868
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||||||| ||||||||||||  | ||||||||||||| ||||    
T  32949926 tctcaattcaatatattctactttacatttatgataaagaaaaatgcaccaatagttga 32949868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 35027572 - 35027502
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    |||||| || |||||  ||||||| |||||||||| || ||||||||||||| ||||||||||| ||||||    
T  35027572 tcaatttaatatatttaactttgcgtttatgataataataaatgcaccaatatttgacaagacatttaaaa 35027502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 37315996 - 37315946
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaata 68  Q
    ||||||||||||||||||||||||||||||||||  | |||||||| ||||    
T  37315996 caattcaacatattctactttgcatttatgataaagaaaaatgcactaata 37315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 53848676 - 53848734
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||||||||||||||||||||  |  |||||||||||| ||||    
T  53848676 tctcaattcaatatattctactttgcatttatgataaataataatgcaccaatagttga 53848734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 5499502 - 5499411
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 111  Q
    ||||||| |||||||| ||||||| |||||||||||| |||||| ||||| |||||   ||||| ||||| ||||| |  |||||||||||||||    
T  5499502 aattcaatatattctattttgcatctatgataagaaggaatgcatcaatatttgac---acactcaaaactatttttctttctctttcacttata 5499411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 36047177 - 36047141
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  36047177 tctcaattcaatatattctactttgcatttatgataa 36047141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 101
Target Start/End: Complemental strand, 38160229 - 38160142
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctct 101  Q
    ||||||||||| |||||  |||||| ||||||||||| | |||| |||| ||||| ||||||| |||||||||||||||||| ||||||    
T  38160229 tctcaattcaatatatttcactttgtatttatgataatggagaa-tgcatcaatatttgacaaagacacttaaaacaatttttctctct 38160142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 8759812 - 8759867
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||||||||||||||||  | ||||||| ||||| ||||    
T  8759812 caattcaatatattctactttgcatttatgataaagaaaaatgcatcaatagttga 8759867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 13529907 - 13529978
Alignment:
Q  30 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    ||||||||| ||||||| |||||   ||||||||||||| || |||||||||| ||||| ||||| ||||||    
T  13529907 ttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctct 13529978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 38977023 - 38977110
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctctt 102  Q
    ||||||||| |||||| ||||| |||||||||||  | |||||||||||||||||| | |||  |||||||||| ||||| |||||||    
T  38977023 tcaattcaatatattccactttacatttatgataggggagaaatgcaccaatacttaagaagtgcacttaaaactatttttctctctt 38977110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 47386286 - 47386219
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    |||||||||||||||||||||||||| || ||  ||||||||  ||| |||||||| ||||| |||||    
T  47386286 atattctactttgcatttatgataaggaggaacacaccaataagtgataagacactcaaaactatttt 47386219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 38310416 - 38310338
Alignment:
Q  34 actttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttata 111  Q
    |||||||||||||||| |  |  |||||||||||| ||||||| || ||||||||  ||||| ||||||||||||||||    
T  38310416 actttgcatttatgatcatgatgaatgcaccaataattgacaatgaaacttaaaatcatttttctctctttcacttata 38310338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 55360425 - 55360364
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||| ||||| |||||| |||||||||||| |||||| ||| ||||||||||||||    
T  55360425 tctcaattcaatatattgtactttacatttatgataaagaagaa-tgcgccaatacttgacaa 55360364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 3505752 - 3505804
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaata 68  Q
    ||||||||||| |||||||||||| |||||||||||| || ||||||| |||||    
T  3505752 tctcaattcaatatattctactttacatttatgataa-aaaaaatgcatcaata 3505804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 10099799 - 10099746
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatactt 71  Q
    |||||||| ||||||||||||  |||||||||||  | ||||||||||||||||    
T  10099799 caattcaatatattctactttaaatttatgataaagaaaaatgcaccaatactt 10099746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 17237075 - 17237160
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    ||||||||| |||||| |||||||||||||||||  ||  ||| ||| ||||||| |||| | |||||||||| ||||| ||||||    
T  17237075 tcaattcaatatattccactttgcatttatgatagtaaagaatccactaatacttaacaaaatcacttaaaactatttttctctct 17237160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 26799295 - 26799258
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgata 50  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  26799295 attctcaattcaatatattctattttgcatttatgata 26799258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 29644383 - 29644420
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgata 50  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  29644383 attctcaattcaatatattctactttacatttatgata 29644420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 41436509 - 41436546
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgata 50  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  41436509 attcgcaattcaaaatattctactttgcatttatgata 41436546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42132846 - 42132879
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa 51  Q
    |||||||| |||||||||||||||||||||||||    
T  42132846 caattcaatatattctactttgcatttatgataa 42132879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 28279870 - 28279946
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaattt 93  Q
    ||||| || ||||||||||||  |||||||||||  | |||||||||||||||| || |||||||| ||||| ||||    
T  28279870 caattaaatatattctactttatatttatgataaagaaaaatgcaccaatacttaacaaagacactcaaaactattt 28279946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 44633189 - 44633271
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactct 99  Q
    ||||||||| || ||||||||| ||||||| |||| |||||| |||||||||||||||| |||||||| ||||| ||||| ||||    
T  44633189 tcaattcaatat-ttctactttacatttatcataaagaagaa-tgcaccaatacttgacaaagacactcaaaactatttttctct 44633271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 48400708 - 48400672
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  48400708 tctcaattcaatatattctactttacatttatgataa 48400672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 5e-23; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 44424342 - 44424243
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcacttata 111  Q
    ||||||||||||| |||||| |||||||||||||||||| || ||||||| ||||||||||||||||| | ||||| |||||  ||||||||||||||||    
T  44424342 attctcaattcaatatattcaactttgcatttatgataataaaaaatgcatcaatacttgacaagacattcaaaaccattttctctctctttcacttata 44424243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 31592580 - 31592678
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 111  Q
    ||||||||||| ||||||||||||| ||||||||||||||  |||||| |||||||||||||||||||  |||| |||||   ||||||||||||||||    
T  31592580 tctcaattcaatatattctactttgtatttatgataagaaagaatgcagcaatacttgacaagacactcgaaactatttttctctctctttcacttata 31592678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 25604394 - 25604488
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 111  Q
    |||||||| |||||||| |||||||||||||||||||  ||||||||||||||| |||||||||| ||||| |||||   ||||||||||||||||    
T  25604394 caattcaatatattctaatttgcatttatgataagaaagaatgcaccaatactt-acaagacactcaaaactatttttctctctctttcacttata 25604488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 29937993 - 29937903
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||||| || ||| ||| ||||| |||||  |||||||    
T  29937993 attctcaattcaatatattttactttgtatttatgataagaagaaatgcactaatacttaactagatactcaaaactatttttttctcttt 29937903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 111
Target Start/End: Complemental strand, 12950026 - 12949943
Alignment:
Q  30 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcacttata 111  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||  |  |||| ||||||||||||||||    
T  12950026 ttctactttgcatttatgataaaaaggaattcaccaatacttgacaagacactcaaaattatttttttctctctttcacttata 12949943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 19515914 - 19515996
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    |||||||| ||||| |||||||||||||||||||  | ||||| |||||||||||||||||||| |||||| ||||| ||||||    
T  19515914 caattcaatatattttactttgcatttatgataatgaaaaatgaaccaatacttgacaagacac-taaaactatttttctctct 19515996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 40710607 - 40710695
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||||||| |||| ||||||||||| ||||||||| |  ||||||| |||| ||||||| ||||| ||||| ||||| ||||||||    
T  40710607 tctcaattcaatatatgctactttgcatgtatgataaggaagaatgcacgaatatttgacaaaacactcaaaactatttttctctcttt 40710695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 9937070 - 9937133
Alignment:
Q  36 tttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 99  Q
    ||||||||||||||||  ||||||||| ||||| ||||||||||||| ||||| ||||||||||    
T  9937070 tttgcatttatgataatgagaaatgcaacaatatttgacaagacactcaaaactattttactct 9937133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 44024746 - 44024821
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    ||||| || |||| |||||||||||||||||||||||||  ||||||||| ||||| ||||||||| ||| |||||    
T  44024746 attcttaactcaatatattctactttgcatttatgataatgagaaatgcatcaatatttgacaagatactaaaaac 44024821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 2756707 - 2756792
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctctt 102  Q
    ||||| || |||||||||||| ||||||||||||    |||||||| |||||||||||||| ||||||||| |||||| |||||||    
T  2756707 caatttaatatattctactttacatttatgataatggtaaatgcactaatacttgacaagagcacttaaaataatttttctctctt 2756792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 4794605 - 4794666
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 78  Q
    ||||||||| |||||| |||||||||||||||||| || ||||||| ||||| |||||||||    
T  4794605 tcaattcaatatattccactttgcatttatgataataaaaaatgcatcaatatttgacaaga 4794666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 8385111 - 8385184
Alignment:
Q  21 ttcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    ||||| ||||| || ||| ||||||||||||  ||||||| | ||||||||||||||||||| |||||||||||    
T  8385111 ttcaatatattatattttacatttatgataatgagaaatgaaacaatacttgacaagacactcaaaacaatttt 8385184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 2048322 - 2048421
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaacaatttt--actctctttcacttata 111  Q
    ||||||||||| |||||||||||||||||||||||||  |  |||||||||||| |||| |||| |||| | ||| |||||   ||||||||||||||||    
T  2048322 tctcaattcaatatattctactttgcatttatgataaacaagaatgcaccaatagttgataagagcactcataaccatttttctctctctttcacttata 2048421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 5425885 - 5425973
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    |||| |||||||| ||||||| ||| |||||||||| | | |||||| |||||||||||||||| ||||| ||||| ||| | ||||||    
T  5425885 attcccaattcaatatattctgcttcgcatttatgacagggagaaatacaccaatacttgacaatacactcaaaactattattctctct 5425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 112
Target Start/End: Complemental strand, 10069662 - 10069562
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga-cacttaaaa-caatttta-ctctctttcacttata 111  Q
    ||||||||||| |||||| ||||||||||||||||||    |||||||| |||||||||||| |  |||||||| || ||||| ||||||||||||||||    
T  10069662 tctcaattcaatatattcgactttgcatttatgataatggtaaatgcacaaatacttgacaaaagtacttaaaatcatttttatctctctttcacttata 10069563  T
Q  112 t 112  Q
    |    
T  10069562 t 10069562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 6972617 - 6972519
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt-actctctttcacttata 111  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||| |||| || | |||| ||||| |||||  ||||||||||||||||    
T  6972617 tctcaattcaatatattctactttgcatttatgataaagaag-aatgcacaaatagttgataagggcactcaaaaccattttctctctctttcacttata 6972519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Original strand, 32556244 - 32556299
Alignment:
Q  57 aatgcaccaatacttgacaag-acacttaaaacaattttactctctttcacttata 111  Q
    ||||||||||||||||||||| | ||||||||| ||||| ||||||||||||||||    
T  32556244 aatgcaccaatacttgacaaggatacttaaaaccatttttctctctttcacttata 32556299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 4283096 - 4283038
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||| ||| ||||||||||||  || |||||||||||||||||    
T  4283096 tctcaattcaatatattctattttacatttatgataaagaggaatgcaccaatacttga 4283038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 1908568 - 1908484
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttg-acaagacacttaaaacaattttactctct 101  Q
    |||||||| |||||||||||| |||||||||| |||||| ||||||| |||||||| | |||||||| ||||| ||||| ||||||    
T  1908568 caattcaatatattctactttacatttatgataaagaag-aatgcactaatacttgcaaaagacactcaaaaccatttttctctct 1908484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 18181295 - 18181203
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    ||||||| |||||||| ||||||||||||||||||||||||  | || ||||||||||||| | |||| | |||||||||| ||||| ||||||    
T  18181295 attattcccaattcaaaatattctactttgcatttatgatagtggag-aatgcaccaatacataacaaaagcacttaaaaccatttttctctct 18181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 9724911 - 9724966
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||    
T  9724911 caattcaatatattctactttacatttatgataaagaag-aatgcaccaatacttga 9724966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 24356144 - 24356199
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||| ||||||||||    
T  24356144 caattcaacatattctactttacatttatgataaagaag-aatgcatcaatacttga 24356199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 314459 - 314556
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt--actctctttcacttata 111  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||| ||||| |||| || | |||| ||||| |||||   ||||||||||||||||    
T  314459 tcaattcaatatattctactttgcatttatgataaagaag-aatgcatcaatagttgataagggcactcaaaaccattttcctctctctttcacttata 314556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 34235094 - 34235144
Alignment:
Q  36 tttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||| ||||    
T  34235094 tttgcatttatg-taaggagaaatgcaccagtacttgacaagacactaaaaa 34235144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 31348545 - 31348599
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||| |||||||||| |||||||||||||| ||  |||||||||||| ||||    
T  31348545 aattcaatatattctactatgcatttatgataaaaaagaatgcaccaatagttga 31348599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 7931573 - 7931493
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttg-acaagacacttaaaacaatttt 94  Q
    ||||||||||| ||||| |||||| |||||||||| |||||| ||||||| |||||||| | |||||||| ||||| |||||    
T  7931573 tctcaattcaatatattttactttacatttatgataaagaag-aatgcactaatacttgaaaaagacactcaaaactatttt 7931493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 8550715 - 8550620
Alignment:
Q  19 aattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaag-acacttaaaacaa--ttttactctctttcacttata 111  Q
    ||||||| |||||  |||||||||||||||||| | || ||||||| ||||||||||||| ||||||||||| |  |||  ||||||||||||||||    
T  8550715 aattcaatatattagactttgcatttatgataatggag-aatgcacaaatacttgacaagaacacttaaaaccacttttctctctctttcacttata 8550620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 14384355 - 14384298
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttg 72  Q
    ||||||||||| ||||| |||||| ||||||||||||  |  ||||||||||||||||    
T  14384355 tctcaattcaatatattatactttacatttatgataatgatgaatgcaccaatacttg 14384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 26273792 - 26273825
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa 51  Q
    |||||||| |||||||||||||||||||||||||    
T  26273792 caattcaatatattctactttgcatttatgataa 26273825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 41436107 - 41436144
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgata 50  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  41436107 attctcaattcaatatattccactttgcatttatgata 41436144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 27001594 - 27001650
Alignment:
Q  20 attcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||| |||||||||||||||||| ||||||    ||||||||||||| |||||||    
T  27001594 attcaatatattctactttgcatttgtgataatggtaaatgcaccaataattgacaa 27001650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 34064245 - 34064331
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  34064245 tctcaattcaatatattctactttacatttatgataagaaagaatgcaccaatacttaacaagacactcaaaactatttttctctct 34064331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 37264346 - 37264441
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaattttactctctttcacttatat 112  Q
    |||||||| |||||||||||||||||||||||||  || |||||| ||||||||||||| | |||| ||||| ||||| |||||||||||||||||    
T  37264346 caattcaatatattctactttgcatttatgataaagagcaatgcatcaatacttgacaagggcactcaaaaccatttttctctctttcacttatat 37264441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 103
Target Start/End: Complemental strand, 40023800 - 40023716
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||| ||||| ||||||||||||||| |||| |||||||| | |||| ||||||||||||| ||||||||||| ||||||||    
T  40023800 aattcaatatattttactttgcatttatggtaaggagaaatgctctaatatttgacaagacactcaaaacaatttttctctcttt 40023716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 14648996 - 14648929
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacact 82  Q
    ||||||||||| ||||||||| |||||||||||||||  ||||||||||||||| |||||||||||||    
T  14648996 tctcaattcaatatattctaccttgcatttatgataatgagaaatgcaccaataattgacaagacact 14648929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 94
Target Start/End: Complemental strand, 10355814 - 10355732
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt 94  Q
    ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| |||| || |||||| ||||| |||||    
T  10355814 attctcaattcaatatattctactttgcatttatgataaagagaaatgcaccaatagttgataaggacactcaaaaccatttt 10355732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 3667954 - 3667882
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| ||||||||| |||||||| ||||    
T  3667954 tctcaattcaatatattctactttacatttatgataagaaataatgcactaatacttgataagacactcaaaa 3667882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 28333204 - 28333287
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    |||||||| |||||||||||| |||||||||||||||  |||||| |||||||| ||||| |||| ||||| ||||| ||||||    
T  28333204 caattcaatatattctactttacatttatgataagaaataatgcatcaatacttaacaagtcactcaaaactatttttctctct 28333287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 37496474 - 37496401
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    ||||||||||| |||||||||||| |||||||||||||||  ||||||| ||||||| |||||| ||| |||||    
T  37496474 tctcaattcaatatattctactttacatttatgataagaaagaatgcacaaatacttaacaagatactcaaaac 37496401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 2849285 - 2849372
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    ||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||  ||||| ||||| ||||||    
T  2849285 tctcaattcaatatattctactttacatttatgataaagaag-aatgcaccaatacttgacaaagacacgcaaaactatttttctctct 2849372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 25778777 - 25778832
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  25778777 caattcaatatattttactttgcatttatgataagaaggaatgtaccaatacttga 25778832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 11730830 - 11730889
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    ||||||||||||||||||||||||||||| ||||||  |||| ||| ||||||||||||||    
T  11730830 atattctactttgcatttatgataagaagtaatgca-aaatatttggcaagacacttaaaa 11730889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 43007924 - 43008023
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaatttt--actctctttcacttata 111  Q
    ||||||||||| |||||||| |||  |||||||||||  | |||||||| |||||||||| |||||||| ||||| |||||   ||||||||||||||||    
T  43007924 tctcaattcaatatattctaatttaaatttatgataaagaaaaatgcacaaatacttgacaaagacactcaaaactatttttccctctctttcacttata 43008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 32776016 - 32776112
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct--ttcacttata 111  Q
    |||||||| |||||||||||| |||||||||| |||||| ||||||||||||||| || ||| |||| ||||| ||||| ||||||  ||||||||||    
T  32776016 caattcaatatattctactttacatttatgataaagaag-aatgcaccaatacttaacaaaggcactcaaaaccatttttctctctccttcacttata 32776112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 32346560 - 32346621
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    ||||| |||||||||||||||||||| ||||||||||| |||  ||||||| |||| |||||    
T  32346560 atattttactttgcatttatgataaggagaaatgcaccgataaatgacaagtcactcaaaac 32346621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 32972092 - 32971996
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa-gacacttaaaacaatttt--actctctttcacttata 111  Q
    |||||||| |||||||||||||||||||||| || ||  |||||||||||| |||| || | |||| ||||| |||||   ||||||||||||||||    
T  32972092 caattcaatatattctactttgcatttatgacaaaaaagaatgcaccaatagttgataagggcactcaaaaccatttttctctctctttcacttata 32971996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 45218232 - 45218148
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttg-acaagacacttaaaacaattttactctct 101  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||||||| | ||| |||| ||||| ||||| ||||||    
T  45218232 caattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttgaaaaaggcactcaaaactatttttctctct 45218148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 6697130 - 6697209
Alignment:
Q  34 actttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactc--tctttcacttata 111  Q
    ||||||||||||||||||  | ||||||||||||||  ||||| ||||||||||  ||||| |||  |||||||||||||    
T  6697130 actttgcatttatgataatgaaaaatgcaccaatacacgacaaaacacttaaaattatttttctctttctttcacttata 6697209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 27337947 - 27337871
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaattt 93  Q
    |||||||| ||||| |||||| ||||||||||||  |  |||||||||||||||||| |||||||| ||||| ||||    
T  27337947 caattcaatatattatactttacatttatgataaagaataatgcaccaatacttgacaaagacactcaaaactattt 27337871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 38181948 - 38181864
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctct 101  Q
    |||||||| |||||||| |||||||||||||||     ||||||||||||||||  |||| ||||||||||| ||||| ||||||    
T  38181948 caattcaatatattctattttgcatttatgatagtggaaaatgcaccaatacttaccaagaacacttaaaaccatttttctctct 38181864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 111
Target Start/End: Original strand, 8150001 - 8150087
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 111  Q
    |||||||||||||  ||||||||||    |||||||| |||| ||||||| ||||||||||| |||||   ||||||||||||||||    
T  8150001 atattctactttgattttatgataatggaaaatgcacaaatatttgacaaaacacttaaaaccatttttctctctctttcacttata 8150087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 9658883 - 9658954
Alignment:
Q  30 ttctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    ||||||||| ||||||| |||||   ||||||||||||| || |||||||||| ||||| ||||| ||||||    
T  9658883 ttctactttacatttatcataagggaaaatgcaccaatagttcacaagacactcaaaaccatttttctctct 9658954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 19687987 - 19688062
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaa 87  Q
    |||| |||||||| ||||| |||||||||||||||||||    |||| || |||||||||||||| ||||||||||    
T  19687987 attcacaattcaatatattatactttgcatttatgataatggtaaattcatcaatacttgacaagaacacttaaaa 19688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 36070135 - 36070222
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    ||||||||||  |||||||||||| | ||||||||||  |  |||||||||||| ||||| |||||||| ||||| ||||| ||||||    
T  36070135 tctcaattcagtatattctactttacgtttatgataaagaataatgcaccaatatttgacaaagacactcaaaaccattttcctctct 36070222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 1099168 - 1099098
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagaca 80  Q
    ||||| |||||||| | ||||||||||||| |||||| || |  | ||||||||||| |||||||||||||    
T  1099168 attatcctcaattcgatatattctactttgtatttataatgatgaaaaatgcaccaacacttgacaagaca 1099098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 1102025 - 1101955
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagaca 80  Q
    |||| ||||||||| | ||||||||||||| |||||  |||| |  |||| ||||||||||||||||||||    
T  1102025 attactctcaattcgatatattctactttgtatttaaaataatagaaaatacaccaatacttgacaagaca 1101955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 9602891 - 9602953
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag 77  Q
    ||||||||||| || |||||||||||||||||||||| ||  |||||| ||||| || |||||    
T  9602891 tctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaag 9602953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 77
Target Start/End: Original strand, 9830462 - 9830524
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag 77  Q
    ||||||||||| || |||||||||||||||||||||| ||  |||||| ||||| || |||||    
T  9830462 tctcaattcaatatgttctactttgcatttatgataaaaaagaatgcatcaatagttaacaag 9830524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 40590907 - 40590841
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    |||||||||| ||||| ||||||||||||| ||||||||||     |||||||||||||||| ||||    
T  40590907 attattctcatttcaatatattctactttgtatttatgatagcggaaaatgcaccaatacttaacaa 40590841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 6591623 - 6591582
Alignment:
Q  10 attattctcaattcaacatattctactttgcatttatgataa 51  Q
    |||| ||| ||||||| |||||||||||||||||||||||||    
T  6591623 attactcttaattcaatatattctactttgcatttatgataa 6591582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 24288455 - 24288511
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    ||||||||| |||||||||||| |||||||||| |||||| ||||||| |||||||||    
T  24288455 tcaattcaatatattctactttacatttatgataaagaag-aatgcacaaatacttga 24288511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 27242809 - 27242749
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||||| ||||| || |||||||||||| |||    ||||||||||||||||||    
T  27242809 attctcaattcaatatattttattttgcatttatgttaatggtaaatgcaccaatacttga 27242749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 31549692 - 31549636
Alignment:
Q  22 tcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 78  Q
    |||| ||||||||||||||||| |||||||    |||||||| ||||||||||||||    
T  31549692 tcaatatattctactttgcattaatgataatggtaaatgcactaatacttgacaaga 31549636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 38589767 - 38589822
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||| |||||| |||||||||||| ||||    
T  38589767 caattcaatatattctactttacatttatgataaagaag-aatgcaccaatagttga 38589822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 9218175 - 9218273
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt--actctctttcacttata 111  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||||||||||||||| || ||||||| ||||| |||||   ||||||||||||||||    
T  9218175 tctcaattcattatattctactttgcatttatgataagaaagaatgcaccaatacttaacgagacactcaaaactatttttctctctctttcacttata 9218273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 39329827 - 39329729
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttac--tctctttcacttata 111  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||| |||||||| | ||||| ||||  |  |||||||||||||||    
T  39329827 tctcaattcaatatattctactttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttatctttctctttcacttata 39329729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 30261574 - 30261492
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    ||||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||||| || | ||||| ||||| ||||||    
T  30261574 aattcaatatattccactttacatttatgataagaaggaatgcaccaatacttgacaagccagtcaaaactatttttctctct 30261492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 48409617 - 48409701
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    ||||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||| |||||||| |||||||| || ||||||    
T  48409617 caattcaacatattctactttacatttatgataaagaag-aatccaccaatacttgacaaagacactcaaaacaatctttctctct 48409701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 42547180 - 42547104
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    |||||||| |||||||  |||||||||||||||||||  ||||||||||||||| |||||||| | ||||| |||||    
T  42547180 caattcaatatattctcttttgcatttatgataagaaagaatgcaccaatacttaacaagacattcaaaactatttt 42547104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 17 - 87
Target Start/End: Original strand, 31650943 - 31651013
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaa 87  Q
    |||||| || |||||||| |||| |||||||||||  | |||||||| |||||||||||||||||||||||    
T  31650943 tcaatttaatatattctaatttgtatttatgataatgaaaaatgcacaaatacttgacaagacacttaaaa 31651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 21296577 - 21296517
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaaga 78  Q
    |||||||| ||||||||||||||||||||||||   | |||||||||||||||| ||||||    
T  21296577 caattcaatatattctactttgcatttatgatagtgaaaaatgcaccaatacttaacaaga 21296517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 76
Target Start/End: Original strand, 41287292 - 41287353
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||||||| |||||||||||| ||||||||||||  |  |||||| |||||||||||||    
T  41287292 tctcaattcaatatattctactttacatttatgataaagaataatgcatcaatacttgacaa 41287353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 99
Target Start/End: Complemental strand, 44219107 - 44219027
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct 99  Q
    |||||||| ||||||||||||| |||||||||||   | |||||||||| |||| |||||||||| ||||| ||||| ||||    
T  44219107 caattcaatatattctactttgtatttatgataatggggaatgcaccaacactt-acaagacactcaaaaccatttttctct 44219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 1334855 - 1334800
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttga 73  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||    
T  1334855 caattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttga 1334800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 46194283 - 46194247
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||||||||||||||||||||    
T  46194283 tctcaattcaatatattctactttgcatttatgataa 46194247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 51164986 - 51165069
Alignment:
Q  19 aattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttga-caagacacttaaaacaattttactctct 101  Q
    ||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||  |||||||| ||||  ||||| ||||||    
T  51164986 aattcaatatattctactttacatttatgataaagaag-aatgcaccaatacttgataaagacactcaaaattatttttctctct 51165069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 53754144 - 53754085
Alignment:
Q  12 tattctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatactt 71  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||| |||||||||||||    
T  53754144 tattcttaattcaatatattctactttacatttatgataaagaagaa-tgcaccaatactt 53754085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 3862249 - 3862170
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    ||||||||||  ||||| || ||||||||||||||||   | |||||| |||| |||||||||||||| |||| ||||||    
T  3862249 tctcaattcagtatattttaatttgcatttatgataatgtggaatgcatcaatccttgacaagacactcaaaataatttt 3862170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 46628004 - 46627929
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaa 87  Q
    |||||| |||||| ||||| |||||||||||||||||||    |||| || |||||||||||||| ||||||||||    
T  46628004 attctctattcaatatattatactttgcatttatgataatggtaaatacatcaatacttgacaagaacacttaaaa 46627929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 29858938 - 29858881
Alignment:
Q  19 aattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaa 76  Q
    ||||||| |||||||||||| |||||||||||| |||||| || |||||||||||||||    
T  29858938 aattcaatatattctactttacatttatgataaagaagaa-tgtaccaatacttgacaa 29858881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 53583635 - 53583558
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaagacacttaaaacaatttt 94  Q
    ||||||| | |||||||||||||||||||| |||| |||||| |||| ||||||||||||| ||| | ||||| |||||    
T  53583635 tcaattccatatattctactttgcatttataataatgaagaa-tgcatcaatacttgacaacacattcaaaactatttt 53583558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 1923123 - 1923156
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa 51  Q
    |||||||| |||||||||||||||||||||||||    
T  1923123 caattcaatatattctactttgcatttatgataa 1923156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Original strand, 8764380 - 8764445
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaatt 92  Q
    ||||| |||||||||||||||||   ||  |||||| ||||||||||||||||||| |||| ||||    
T  8764380 atattttactttgcatttatgatgttaaagaatgcatcaatacttgacaagacactcaaaaaaatt 8764445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 8769282 - 8769343
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    |||||||||||||||||||||||   ||  |||||| |||||||||| |||||||| |||||    
T  8769282 atattctactttgcatttatgatgttaaagaatgcatcaatacttgataagacactcaaaac 8769343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 45746408 - 45746461
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagaca 80  Q
    ||||||||||||||||||||| ||||||  || ||||||||| ||||| |||||    
T  45746408 atattctactttgcatttatggtaagaatgaacgcaccaataattgacgagaca 45746461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 49122207 - 49122150
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||| |||||||||||||||||||||||||  |||||  ||| ||||||| ||||    
T  49122207 aattcaatatattctactttgcatttatgataaatagaaagacactaatacttaacaa 49122150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 52325205 - 52325242
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgata 50  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  52325205 attctcaattcaatatattccactttgcatttatgata 52325242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 8498284 - 8498340
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatactt 71  Q
    ||||||||||| ||||| |||| |||||||| | |||| || |||||||||||||||    
T  8498284 tctcaattcaatatattttactctgcatttaaggtaaggaggaatgcaccaatactt 8498340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 45267285 - 45267205
Alignment:
Q  28 tattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctctttcactt 108  Q
    ||||||| |||||||||||||||||||  |||| | ||||| |||| || | ||| ||||| || || |||||||||||||    
T  45267285 tattctattttgcatttatgataagaatgaatgaatcaatatttgataaaatactcaaaactatctttctctctttcactt 45267205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 47684814 - 47684866
Alignment:
Q  57 aatgcaccaatacttgacaagacacttaaaacaatttt-actctctttcactt 108  Q
    ||||||||||||||||| || ||||| ||||| ||||| ||||||||||||||    
T  47684814 aatgcaccaatacttgataaaacactcaaaaccattttaactctctttcactt 47684866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 16126244 - 16126314
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaac 88  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  16126244 caattcaatatattatactttgcatttatgataagaataaatgcaccaatactttacaagacactcaaaac 16126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 111
Target Start/End: Complemental strand, 15371937 - 15371842
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactct--ctttcacttata 111  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||| |||| |||| |||||||| ||||| ||||| ||||  ||||||||||||    
T  15371937 caattcaatatattctactttgcatttatgataaagaag-aatgcactaatagttgataagacactcaaaaccatttttctctcgctttcacttata 15371842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 31075998 - 31075915
Alignment:
Q  18 caattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    |||||||| ||||| || |||| ||||||||||||||| |||||||||||| |||| |||||||| || || ||||| ||||||    
T  31075998 caattcaatatattatattttgtatttatgataagaaggaatgcaccaatagttgaaaagacactcaataccatttttctctct 31075915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 15321304 - 15321216
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctct 101  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||| || | |||||||| ||||| | ||| ||||||    
T  15321304 attctcaattcaatatattctactttgcatttatgataaagaag-aacgcaccaatagtttataagacactgaaaaccaattttctctct 15321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 15355605 - 15355693
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||||||  ||||||||||||| ||||||||| |||||| |||||||||||| |||| |||||||| ||||| | ||| ||||||||    
T  15355605 tctcaattcattatattctactttggatttatgataaagaag-aatgcaccaatagttgataagacactcaaaaccaattttctctcttt 15355693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 20383887 - 20383971
Alignment:
Q  27 atattctactttgcatttatgataagaagaaatgcaccaatacttgacaagacacttaaaacaa--ttttactctctttcactta 109  Q
    |||||||| ||| |||||| |||||  || |||||||||||||||||||||||||| ||||| |  |||| ||||||||||||||    
T  20383887 atattctatttttcatttaagataatgaggaatgcaccaatacttgacaagacactcaaaaccatttttttctctctttcactta 20383971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 33018018 - 33017947
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaac 88  Q
    |||||||| |||||||||||| |||||||||||| |||||| |||||||||||||||| |||||||| |||||    
T  33018018 caattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttgacaaagacactcaaaac 33017947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 3874123 - 3874066
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaa 76  Q
    ||||||| |||||| ||||| ||||||||||||  |  ||||||||||||||||||||    
T  3874123 aattcaatatattcaactttacatttatgataaagaataatgcaccaatacttgacaa 3874066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 31265812 - 31265896
Alignment:
Q  18 caattcaacatattctactttgcatttatgata-agaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctct 101  Q
    |||||||| |||||| ||||| |||||||||||  | || ||||||||||||||| |||||| |||||||||| ||||| ||||||    
T  31265812 caattcaatatattccactttacatttatgatagtggag-aatgcaccaatacttaacaagagcacttaaaactatttttctctct 31265896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 33921543 - 33921459
Alignment:
Q  18 caattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctct 101  Q
    |||||||| |||||||||||| |||||||||| |||||| |||| |||||||||| || || ||||| ||||| ||||| ||||||    
T  33921543 caattcaatatattctactttacatttatgataaagaag-aatggaccaatacttaacaaacacactcaaaaccatttttctctct 33921459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 111
Target Start/End: Original strand, 4238453 - 4238548
Alignment:
Q  17 tcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaaga-cacttaaaacaattttactctctttcacttata 111  Q
    ||||||||| | |||  ||||| |||||||||||  |||||| ||||||||||||| |||||| |||||||||| || || |||||||||| |||||    
T  4238453 tcaattcaatagatttcactttacatttatgatagtgaagaa-tgcaccaatacttaacaagagcacttaaaactatatttctctctttcatttata 4238548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 15351460 - 15351424
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  15351460 tctcaattcaatatattctaccttgcatttatgataa 15351424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 15 - 103
Target Start/End: Original strand, 595 - 683
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgat-aagaagaaatgcaccaatacttgacaagacacttaaaacaattttactctcttt 103  Q
    ||||||||||  ||||||||||||| ||||||||| |||||| |||||||||||| |||| |||||||| ||||| | ||| ||||||||    
T  595 tctcaattcattatattctactttggatttatgataaagaag-aatgcaccaatagttgataagacactcaaaaccaattttctctcttt 683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 8033 - 7978
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaata 68  Q
    ||||||||||||| ||||| |||||| ||||||||||||  |||||||||||||||    
T  8033 attctcaattcaatatattttactttacatttatgataaagagaaatgcaccaata 7978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 352535 - 352449
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaattttactctcttt 103  Q
    |||||||| |||||||||||| |||||||||||| |||||| ||||||||||||| || |||||||| ||||  ||||| ||||||||    
T  352535 caattcaatatattctactttacatttatgataaagaagaa-tgcaccaatacttaacaaagacactcaaaattatttttctctcttt 352449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 5848 - 5906
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttga 73  Q
    ||||||||||| |||||||||||| ||||||||||||  || |||||| ||||||||||    
T  5848 tctcaattcaatatattctactttacatttatgataaagagcaatgcatcaatacttga 5906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 171260 - 171349
Alignment:
Q  19 aattcaacatattctactttgcatttatgataagaagaaatgcaccaatacttgacaag-acacttaaaacaattttactctctttcact 107  Q
    ||||||| |||||||||||| ||||||||||||    ||| |||||||||||||||||| ||| |||||||  |||| ||||| ||||||    
T  171260 aattcaatatattctactttacatttatgataatggtaaacgcaccaatacttgacaagaacatttaaaaccttttttctctccttcact 171349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 111
Target Start/End: Complemental strand, 12515 - 12414
Alignment:
Q  13 attctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaacaat--tttactctctttcactt 108  Q
    ||||| ||||||| |||||||||||| ||||||| |||| |||||| ||||| |||||||||| |||||||| ||||| ||  || ||||||||||| ||    
T  12515 attcttaattcaatatattctactttacatttataataaagaagaa-tgcactaatacttgacaaagacactcaaaaccattattcactctctttcattt 12417  T
Q  109 ata 111  Q
    |||    
T  12416 ata 12414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 6477 - 6404
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgac-aagacacttaaaa 87  Q
    ||||||||||| ||||| |||||| |||||||||||| |||||| |||| ||||||||||| |||||||| ||||    
T  6477 tctcaattcaatatattttactttacatttatgataaagaagaa-tgcatcaatacttgactaagacactcaaaa 6404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 229856 - 229933
Alignment:
Q  18 caattcaacatattctactttgcatttatgataa-gaagaaatgcaccaatacttgacaaga-cacttaaaacaatttt 94  Q
    |||||||| |||| | |||||||||||||||||| | || ||||||||||||||| |||||| ||||||||||| ||||    
T  229856 caattcaatatataccactttgcatttatgataatggag-aatgcaccaatacttaacaagagcacttaaaacattttt 229933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 220023 - 220059
Alignment:
Q  15 tctcaattcaacatattctactttgcatttatgataa 51  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  220023 tctcaattcaatatattctattttgcatttatgataa 220059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University