View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21137_low_12 (Length: 224)

Name: NF21137_low_12
Description: NF21137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21137_low_12
NF21137_low_12
[»] scaffold0222 (2 HSPs)
scaffold0222 (16-206)||(21048-21238)
scaffold0222 (16-202)||(371-557)
[»] chr2 (15 HSPs)
chr2 (16-200)||(23274429-23274613)
chr2 (46-202)||(19716438-19716594)
chr2 (46-202)||(19721001-19721157)
chr2 (65-203)||(23097438-23097576)
chr2 (112-211)||(28350807-28350906)
chr2 (17-184)||(20848426-20848592)
chr2 (112-202)||(21901469-21901559)
chr2 (46-200)||(12577219-12577373)
chr2 (111-173)||(22462931-22462993)
chr2 (52-173)||(24657108-24657229)
chr2 (108-202)||(24817261-24817355)
chr2 (46-173)||(24704932-24705059)
chr2 (111-173)||(11351161-11351223)
chr2 (111-172)||(23205245-23205306)
chr2 (111-172)||(23676849-23676910)
[»] scaffold0317 (1 HSPs)
scaffold0317 (16-202)||(2865-3051)
[»] chr7 (23 HSPs)
chr7 (16-202)||(13676646-13676832)
chr7 (65-203)||(11385296-11385434)
chr7 (16-200)||(15099473-15099657)
chr7 (16-211)||(19150206-19150401)
chr7 (16-211)||(20749605-20749800)
chr7 (16-202)||(12459823-12460009)
chr7 (46-200)||(14283244-14283398)
chr7 (19-202)||(16947340-16947523)
chr7 (17-203)||(12712530-12712716)
chr7 (17-198)||(26091670-26091851)
chr7 (17-198)||(40924689-40924870)
chr7 (65-198)||(13965540-13965673)
chr7 (19-211)||(13024542-13024734)
chr7 (16-203)||(14261113-14261300)
chr7 (17-191)||(49155497-49155671)
chr7 (37-198)||(26115462-26115623)
chr7 (17-198)||(21755608-21755789)
chr7 (110-202)||(12203668-12203760)
chr7 (46-200)||(14144886-14145040)
chr7 (16-202)||(12798372-12798555)
chr7 (46-200)||(18050823-18050977)
chr7 (108-209)||(15627810-15627911)
chr7 (103-173)||(11984273-11984343)
[»] scaffold0010 (4 HSPs)
scaffold0010 (16-211)||(39208-39403)
scaffold0010 (22-172)||(180753-180903)
scaffold0010 (111-173)||(14753-14815)
scaffold0010 (111-165)||(5244-5298)
[»] scaffold0034 (3 HSPs)
scaffold0034 (16-206)||(1832-2022)
scaffold0034 (31-200)||(11792-11961)
scaffold0034 (94-202)||(70684-70792)
[»] chr3 (37 HSPs)
chr3 (16-206)||(12357632-12357822)
chr3 (16-203)||(18131455-18131642)
chr3 (46-206)||(14290637-14290797)
chr3 (19-200)||(17494484-17494664)
chr3 (16-202)||(31941737-31941923)
chr3 (16-202)||(31692294-31692480)
chr3 (16-206)||(35983015-35983205)
chr3 (17-198)||(47126779-47126960)
chr3 (37-198)||(28757174-28757335)
chr3 (17-211)||(16326807-16327003)
chr3 (65-200)||(17189257-17189392)
chr3 (17-198)||(10408803-10408984)
chr3 (16-129)||(11949107-11949220)
chr3 (19-200)||(12181181-12181362)
chr3 (65-202)||(24190187-24190324)
chr3 (46-200)||(16384483-16384637)
chr3 (16-202)||(16825388-16825574)
chr3 (70-200)||(16831639-16831769)
chr3 (19-202)||(11958290-11958473)
chr3 (112-211)||(15008684-15008783)
chr3 (112-198)||(2037025-2037111)
chr3 (112-198)||(2040766-2040852)
chr3 (112-198)||(14039676-14039762)
chr3 (94-200)||(13317680-13317786)
chr3 (110-200)||(15230531-15230621)
chr3 (110-200)||(15236399-15236489)
chr3 (46-200)||(8744501-8744655)
chr3 (46-200)||(13944888-13945042)
chr3 (46-203)||(12857604-12857761)
chr3 (111-198)||(12843227-12843314)
chr3 (118-202)||(19727686-19727770)
chr3 (91-154)||(10417202-10417265)
chr3 (111-202)||(15262549-15262640)
chr3 (47-173)||(12501788-12501914)
chr3 (111-173)||(16804096-16804158)
chr3 (111-173)||(23079166-23079228)
chr3 (103-173)||(23414939-23415009)
[»] scaffold0367 (1 HSPs)
scaffold0367 (16-211)||(8896-9091)
[»] chr8 (16 HSPs)
chr8 (16-211)||(22027595-22027790)
chr8 (19-202)||(31413856-31414039)
chr8 (17-198)||(28984183-28984364)
chr8 (70-198)||(16268552-16268680)
chr8 (46-200)||(22054164-22054318)
chr8 (112-211)||(6606784-6606883)
chr8 (16-202)||(29300750-29300936)
chr8 (113-202)||(20391454-20391543)
chr8 (25-209)||(22374149-22374333)
chr8 (65-206)||(21928748-21928889)
chr8 (52-198)||(19985487-19985633)
chr8 (111-174)||(21671881-21671944)
chr8 (111-173)||(22043193-22043255)
chr8 (111-173)||(30310497-30310559)
chr8 (111-200)||(22523876-22523965)
chr8 (111-143)||(22421276-22421308)
[»] chr1 (18 HSPs)
chr1 (16-211)||(20832844-20833039)
chr1 (16-211)||(19857525-19857720)
chr1 (19-202)||(24096568-24096751)
chr1 (17-202)||(21961279-21961464)
chr1 (46-202)||(21738989-21739145)
chr1 (16-203)||(21742504-21742691)
chr1 (17-198)||(20297635-20297816)
chr1 (17-202)||(52988993-52989178)
chr1 (17-198)||(38909783-38909964)
chr1 (17-198)||(48426125-48426306)
chr1 (17-211)||(31536941-31537135)
chr1 (37-198)||(37680321-37680482)
chr1 (17-198)||(20074666-20074847)
chr1 (19-200)||(22015700-22015881)
chr1 (112-211)||(18273114-18273213)
chr1 (31-202)||(20853713-20853884)
chr1 (108-200)||(16379406-16379498)
chr1 (111-173)||(21228538-21228600)
[»] scaffold0004 (3 HSPs)
scaffold0004 (21-211)||(319482-319672)
scaffold0004 (16-211)||(325941-326135)
scaffold0004 (112-202)||(200361-200451)
[»] scaffold0706 (1 HSPs)
scaffold0706 (16-211)||(5084-5279)
[»] scaffold0011 (2 HSPs)
scaffold0011 (16-203)||(153726-153913)
scaffold0011 (111-202)||(23417-23508)
[»] scaffold0167 (1 HSPs)
scaffold0167 (16-202)||(5287-5473)
[»] chr6 (22 HSPs)
chr6 (16-206)||(24515436-24515626)
chr6 (19-209)||(19456095-19456285)
chr6 (19-209)||(19466240-19466430)
chr6 (16-202)||(14376942-14377128)
chr6 (13-211)||(18797756-18797954)
chr6 (16-202)||(10465874-10466060)
chr6 (65-203)||(21567016-21567154)
chr6 (46-200)||(19438101-19438255)
chr6 (37-198)||(24367490-24367651)
chr6 (17-203)||(34642610-34642797)
chr6 (112-202)||(8720731-8720821)
chr6 (112-202)||(16813805-16813895)
chr6 (112-211)||(19486311-19486410)
chr6 (115-204)||(21474768-21474857)
chr6 (124-206)||(25771021-25771103)
chr6 (111-211)||(30678041-30678141)
chr6 (125-211)||(25958770-25958856)
chr6 (111-200)||(23081587-23081676)
chr6 (31-202)||(20010527-20010699)
chr6 (22-149)||(15462411-15462538)
chr6 (55-168)||(27559029-27559142)
chr6 (111-173)||(21764976-21765038)
[»] chr4 (21 HSPs)
chr4 (22-202)||(16150847-16151027)
chr4 (22-202)||(16154993-16155173)
chr4 (16-200)||(18259646-18259830)
chr4 (17-198)||(7357473-7357654)
chr4 (17-198)||(3261679-3261860)
chr4 (19-200)||(15266984-15267165)
chr4 (16-202)||(20893236-20893422)
chr4 (46-196)||(44658753-44658903)
chr4 (17-198)||(29450422-29450603)
chr4 (16-202)||(14993248-14993434)
chr4 (65-202)||(11204113-11204250)
chr4 (47-203)||(15073595-15073751)
chr4 (112-211)||(8708978-8709077)
chr4 (16-202)||(27903590-27903776)
chr4 (46-200)||(51603675-51603829)
chr4 (46-200)||(53750353-53750507)
chr4 (70-213)||(13879368-13879511)
chr4 (111-211)||(14697401-14697501)
chr4 (111-174)||(8336-8399)
chr4 (116-174)||(15685-15743)
chr4 (111-173)||(18224123-18224185)
[»] scaffold0243 (1 HSPs)
scaffold0243 (16-211)||(9647-9842)
[»] scaffold0156 (1 HSPs)
scaffold0156 (16-202)||(37173-37359)
[»] scaffold0664 (1 HSPs)
scaffold0664 (46-211)||(7302-7467)
[»] scaffold1032 (1 HSPs)
scaffold1032 (19-200)||(701-882)
[»] scaffold0106 (1 HSPs)
scaffold0106 (16-211)||(34571-34766)
[»] scaffold0017 (2 HSPs)
scaffold0017 (46-200)||(4339-4493)
scaffold0017 (55-173)||(16979-17097)
[»] scaffold0420 (1 HSPs)
scaffold0420 (19-204)||(8851-9036)
[»] scaffold0348 (2 HSPs)
scaffold0348 (46-211)||(4724-4889)
scaffold0348 (53-209)||(17361-17517)
[»] scaffold0058 (1 HSPs)
scaffold0058 (16-209)||(22356-22549)
[»] scaffold2062 (1 HSPs)
scaffold2062 (19-203)||(755-939)
[»] scaffold0235 (2 HSPs)
scaffold0235 (16-211)||(8337-8532)
scaffold0235 (16-211)||(18551-18746)
[»] scaffold0335 (1 HSPs)
scaffold0335 (16-202)||(4188-4374)
[»] scaffold0029 (2 HSPs)
scaffold0029 (17-203)||(115797-115983)
scaffold0029 (91-172)||(93808-93889)
[»] scaffold0020 (2 HSPs)
scaffold0020 (46-200)||(98469-98623)
scaffold0020 (25-203)||(176230-176408)
[»] scaffold0074 (1 HSPs)
scaffold0074 (16-200)||(15306-15490)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-200)||(769-953)
[»] chr5 (24 HSPs)
chr5 (16-196)||(23563237-23563417)
chr5 (19-202)||(23077968-23078151)
chr5 (17-202)||(22505799-22505984)
chr5 (17-198)||(25851192-25851373)
chr5 (17-198)||(20345402-20345583)
chr5 (17-198)||(14884058-14884239)
chr5 (112-211)||(23669847-23669946)
chr5 (112-198)||(16258103-16258189)
chr5 (112-198)||(22591822-22591908)
chr5 (112-198)||(22595377-22595463)
chr5 (111-202)||(21870341-21870432)
chr5 (111-202)||(21874621-21874712)
chr5 (46-200)||(17266399-17266553)
chr5 (114-211)||(21983231-21983328)
chr5 (114-202)||(21561088-21561176)
chr5 (115-211)||(43122685-43122781)
chr5 (31-202)||(22465084-22465255)
chr5 (108-209)||(21631455-21631556)
chr5 (111-200)||(26735793-26735882)
chr5 (111-211)||(23474426-23474526)
chr5 (31-154)||(28892053-28892176)
chr5 (111-173)||(18782346-18782408)
chr5 (91-172)||(20824647-20824728)
chr5 (70-154)||(20779086-20779170)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-203)||(16871-17058)
[»] scaffold1433 (1 HSPs)
scaffold1433 (28-206)||(1191-1369)
[»] scaffold1299 (1 HSPs)
scaffold1299 (65-203)||(1731-1869)
[»] scaffold0476 (1 HSPs)
scaffold0476 (65-211)||(420-566)
[»] scaffold0404 (1 HSPs)
scaffold0404 (28-206)||(7990-8168)
[»] scaffold2165 (1 HSPs)
scaffold2165 (17-202)||(687-872)
[»] scaffold1426 (1 HSPs)
scaffold1426 (17-198)||(1495-1676)
[»] scaffold0035 (1 HSPs)
scaffold0035 (19-200)||(6042-6223)
[»] scaffold0001 (1 HSPs)
scaffold0001 (17-202)||(514237-514422)
[»] scaffold1056 (1 HSPs)
scaffold1056 (46-206)||(1984-2144)
[»] scaffold0146 (1 HSPs)
scaffold0146 (16-200)||(170-354)
[»] scaffold0072 (1 HSPs)
scaffold0072 (16-211)||(54281-54476)
[»] scaffold0009 (2 HSPs)
scaffold0009 (19-202)||(251856-252039)
scaffold0009 (111-173)||(229765-229827)
[»] scaffold1517 (1 HSPs)
scaffold1517 (16-202)||(1371-1557)
[»] scaffold0076 (1 HSPs)
scaffold0076 (16-202)||(53307-53493)
[»] scaffold0067 (4 HSPs)
scaffold0067 (25-203)||(64485-64663)
scaffold0067 (16-200)||(29858-30042)
scaffold0067 (25-203)||(49063-49241)
scaffold0067 (25-203)||(58097-58275)
[»] scaffold0046 (1 HSPs)
scaffold0046 (16-206)||(70342-70532)
[»] scaffold0023 (2 HSPs)
scaffold0023 (16-202)||(164285-164471)
scaffold0023 (111-198)||(43341-43428)
[»] scaffold0118 (1 HSPs)
scaffold0118 (17-198)||(696-877)
[»] scaffold0114 (1 HSPs)
scaffold0114 (46-211)||(40322-40487)
[»] scaffold0108 (1 HSPs)
scaffold0108 (16-201)||(50339-50524)
[»] scaffold0041 (1 HSPs)
scaffold0041 (17-198)||(41970-42151)
[»] scaffold0523 (2 HSPs)
scaffold0523 (46-202)||(5704-5860)
scaffold0523 (17-198)||(11631-11812)
[»] scaffold0203 (1 HSPs)
scaffold0203 (16-176)||(764-924)
[»] scaffold0310 (1 HSPs)
scaffold0310 (16-202)||(11211-11397)
[»] scaffold0104 (1 HSPs)
scaffold0104 (25-206)||(43299-43480)
[»] scaffold0054 (1 HSPs)
scaffold0054 (47-211)||(63394-63558)
[»] scaffold1530 (1 HSPs)
scaffold1530 (79-202)||(801-924)
[»] scaffold0765 (1 HSPs)
scaffold0765 (25-211)||(6132-6318)
[»] scaffold0751 (1 HSPs)
scaffold0751 (16-202)||(5415-5600)
[»] scaffold0053 (2 HSPs)
scaffold0053 (46-202)||(62656-62812)
scaffold0053 (48-173)||(65211-65336)
[»] scaffold0026 (1 HSPs)
scaffold0026 (47-206)||(51916-52075)
[»] scaffold0005 (1 HSPs)
scaffold0005 (52-203)||(263496-263647)
[»] scaffold0276 (1 HSPs)
scaffold0276 (37-198)||(23811-23972)
[»] scaffold0261 (4 HSPs)
scaffold0261 (16-153)||(12345-12482)
scaffold0261 (16-153)||(20525-20662)
scaffold0261 (170-203)||(12297-12330)
scaffold0261 (170-203)||(20477-20510)
[»] scaffold0708 (1 HSPs)
scaffold0708 (19-211)||(5020-5212)
[»] scaffold0102 (2 HSPs)
scaffold0102 (46-202)||(42962-43118)
scaffold0102 (46-173)||(50258-50385)
[»] scaffold0190 (1 HSPs)
scaffold0190 (19-202)||(30210-30393)
[»] scaffold0151 (1 HSPs)
scaffold0151 (53-200)||(428-575)
[»] scaffold0003 (2 HSPs)
scaffold0003 (52-203)||(203651-203802)
scaffold0003 (111-171)||(424637-424697)
[»] scaffold1845 (1 HSPs)
scaffold1845 (88-202)||(1188-1302)
[»] scaffold0239 (1 HSPs)
scaffold0239 (46-200)||(9673-9827)
[»] scaffold0068 (1 HSPs)
scaffold0068 (17-202)||(66992-67177)
[»] scaffold0434 (1 HSPs)
scaffold0434 (111-203)||(5785-5877)
[»] scaffold0405 (1 HSPs)
scaffold0405 (46-204)||(5866-6024)
[»] scaffold0031 (1 HSPs)
scaffold0031 (94-203)||(115936-116045)
[»] scaffold0180 (1 HSPs)
scaffold0180 (87-202)||(30897-31012)
[»] scaffold0490 (1 HSPs)
scaffold0490 (132-202)||(3215-3285)
[»] scaffold0188 (1 HSPs)
scaffold0188 (124-202)||(33256-33334)
[»] scaffold0443 (1 HSPs)
scaffold0443 (37-161)||(12052-12176)
[»] scaffold0100 (1 HSPs)
scaffold0100 (111-211)||(16484-16584)
[»] scaffold0609 (2 HSPs)
scaffold0609 (112-202)||(1269-1359)
scaffold0609 (133-202)||(7908-7977)
[»] scaffold0161 (1 HSPs)
scaffold0161 (110-199)||(36156-36245)
[»] scaffold0088 (1 HSPs)
scaffold0088 (17-173)||(30169-30325)
[»] scaffold0130 (1 HSPs)
scaffold0130 (115-202)||(3776-3863)
[»] scaffold0192 (1 HSPs)
scaffold0192 (110-203)||(29855-29948)
[»] scaffold0040 (2 HSPs)
scaffold0040 (111-200)||(18174-18263)
scaffold0040 (111-174)||(110819-110882)
[»] scaffold0270 (2 HSPs)
scaffold0270 (111-211)||(7202-7302)
scaffold0270 (111-211)||(14332-14432)
[»] scaffold0529 (1 HSPs)
scaffold0529 (108-211)||(5414-5517)
[»] scaffold0042 (1 HSPs)
scaffold0042 (108-211)||(26678-26781)
[»] scaffold1914 (1 HSPs)
scaffold1914 (70-200)||(1116-1246)
[»] scaffold0518 (1 HSPs)
scaffold0518 (157-211)||(2206-2260)
[»] scaffold0008 (2 HSPs)
scaffold0008 (111-197)||(139499-139585)
scaffold0008 (111-182)||(179-250)
[»] scaffold0309 (1 HSPs)
scaffold0309 (16-101)||(12961-13046)
[»] scaffold0865 (1 HSPs)
scaffold0865 (115-203)||(1155-1243)
[»] scaffold0509 (1 HSPs)
scaffold0509 (116-168)||(12162-12214)
[»] scaffold0133 (1 HSPs)
scaffold0133 (115-203)||(28168-28256)
[»] scaffold0605 (1 HSPs)
scaffold0605 (91-202)||(1589-1700)
[»] scaffold2059 (1 HSPs)
scaffold2059 (111-197)||(658-744)
[»] scaffold0165 (2 HSPs)
scaffold0165 (160-206)||(12322-12368)
scaffold0165 (16-105)||(12194-12283)
[»] scaffold0044 (1 HSPs)
scaffold0044 (111-173)||(17489-17551)
[»] scaffold0019 (1 HSPs)
scaffold0019 (111-173)||(171447-171509)
[»] scaffold0018 (1 HSPs)
scaffold0018 (108-202)||(9235-9329)
[»] scaffold0293 (1 HSPs)
scaffold0293 (111-200)||(15739-15828)
[»] scaffold0006 (1 HSPs)
scaffold0006 (117-174)||(104561-104618)
[»] scaffold1220 (1 HSPs)
scaffold1220 (47-143)||(1-97)
[»] scaffold0282 (1 HSPs)
scaffold0282 (111-211)||(13349-13449)
[»] scaffold0148 (1 HSPs)
scaffold0148 (107-211)||(2324-2428)
[»] scaffold0077 (1 HSPs)
scaffold0077 (111-211)||(57489-57589)
[»] scaffold0075 (2 HSPs)
scaffold0075 (111-174)||(48059-48122)
scaffold0075 (116-174)||(55383-55441)
[»] scaffold0289 (1 HSPs)
scaffold0289 (111-173)||(117-179)
[»] scaffold0012 (1 HSPs)
scaffold0012 (111-165)||(216341-216395)
[»] scaffold0848 (1 HSPs)
scaffold0848 (118-211)||(4874-4967)
[»] scaffold0621 (2 HSPs)
scaffold0621 (70-198)||(305-433)
scaffold0621 (70-198)||(4722-4850)
[»] scaffold0585 (1 HSPs)
scaffold0585 (171-203)||(743-775)
[»] scaffold0413 (1 HSPs)
scaffold0413 (111-143)||(3871-3903)
[»] scaffold0357 (1 HSPs)
scaffold0357 (111-143)||(17920-17952)
[»] scaffold0331 (1 HSPs)
scaffold0331 (108-164)||(14901-14957)
[»] scaffold0181 (1 HSPs)
scaffold0181 (55-143)||(28871-28959)
[»] scaffold0098 (1 HSPs)
scaffold0098 (118-202)||(25808-25892)


Alignment Details
Target: scaffold0222 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 21048 - 21238
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  21048 tcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgtcccttctgtccacacctgaagcacttcttctcacctttagtacaaa 21147  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21148 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcct 21238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 557 - 371
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  || || ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||| || |||||||    
T  557 tcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgtcctttctgaccacacctgaaacacttcttctcatccttggtacaaa 458  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| ||| ||||||||||||   ||||| ||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  457 catcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 23274429 - 23274613
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23274429 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagcacttcttctcatctttagtacaaa 23274528  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  23274529 cattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatt 23274613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 19716594 - 19716438
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19716594 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19716495  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19716494 tgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 19716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 19721157 - 19721001
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  19721157 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 19721058  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19721057 tgtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattca 19721001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 23097576 - 23097438
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||| | ||||| ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  ||||||||    
T  23097576 tgtgtcctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagc 23097477  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23097476 aggagcatctctcctcttgggcctcctctcatcattcag 23097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 28350807 - 28350906
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||  |||||||    
T  28350807 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 28350906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 184
Target Start/End: Original strand, 20848426 - 20848592
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  20848426 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 20848525  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgg 184  Q
    |||||| |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||    
T  20848526 attactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcatctctcctcttgg 20848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 21901469 - 21901559
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||||||||    
T  21901469 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattca 21901559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 12577219 - 12577373
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  12577219 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 12577318  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  12577319 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 12577373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 22462993 - 22462931
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||||||||| ||| | |||| |||||| |||||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagcatc 22462931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 173
Target Start/End: Complemental strand, 24657229 - 24657108
Alignment:
Q  52 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 151  Q
    |||||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| | |    
T  24657229 caatcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaac 24657130  T
Q  152 aaagaatctcagcaggagcatc 173  Q
    ||  ||||||||||||| ||||    
T  24657129 aagtaatctcagcaggaacatc 24657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 24817355 - 24817261
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||| |||||||| |||||||||||  | ||||||| |||||||| || || |||| || |  | |||||||||||||||||||    
T  24817355 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattca 24817261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 24705059 - 24704932
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| |||||||||||  |||| |||||||  ||||||   || ||||||||  | || | || ||||||||| || |||||||||||||||||||| |    
T  24705059 cgcttgcaatcagctaaagtgtgacccttcttgccacactggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcaccacaat 24704960  T
Q  146 tgtagcaaagaatctcagcaggagcatc 173  Q
    || | || | ||||||||||||| ||||    
T  24704959 tgaaacagataatctcagcaggaacatc 24704932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 11351223 - 11351161
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  11351223 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 11351161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 23205245 - 23205306
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 172  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| | ||||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23205306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 23676849 - 23676910
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 172  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| | ||||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagcat 23676910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 2865 - 3051
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  2865 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagaacttcttctcatctttatcacaaa 2964  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  2965 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 3051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 13676646 - 13676832
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||  |||||    
T  13676646 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtcccttctgtccacacctgaagtacttcttctcatctttatcacaaa 13676745  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  13676746 cattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 13676832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 11385434 - 11385296
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||    
T  11385434 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagc 11385335  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11385334 aggagcatctctcctcttgggccttctctcatcattcag 11385296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 15099657 - 15099473
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| ||||| || |||||||||||| |||   ||||||||||||| |||||||| ||||| |||||||||||| ||  |||||    
T  15099657 tcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaa 15099558  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    | ||||| |||||||||||||||||||||||| ||||||  || |||| |||||||||||||||||||||||||||| |||||||    
T  15099557 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatt 15099473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 19150206 - 19150401
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |    
T  19150206 tcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacaca 19150305  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  19150306 cattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgct 19150401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 20749605 - 20749800
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || ||||| ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||| ||||  |  ||| |    
T  20749605 tcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctgatctcgatcacaca 20749704  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||||||||||||||||||| |||||| ||| |||| |||||||||||||||||| ||||||||||||||||||| ||| ||||    
T  20749705 cattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgct 20749800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 12459823 - 12460009
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  12459823 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 12459922  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || ||||||||||| |||||||||||||| || | ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12459923 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattca 12460009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 14283398 - 14283244
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| |||||||||||| |||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  14283398 cgcttgcaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 14283299  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| |||| || |||||||||||||||||||||   ||||||||||||||||||    
T  14283298 tgtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcatt 14283244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 16947523 - 16947340
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| |||||||| |||||||| ||||||| | ||||||| ||||| ||||||||||  || ||| |||||||| ||  |||| |||    
T  16947523 ttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacacacttcctctcatctctaccacaagcat 16947424  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||||||||| |||||||||||||| |||| ||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  16947423 tactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattca 16947340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 12712716 - 12712530
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||||||||| || || || || || || ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  12712716 cattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 12712617  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||||||||||| ||||||||  ||||||  |||||| ||||||  ||||| | |||||| || ||||||||||||||    
T  12712616 attacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagtgtctcttcccttgggtcttctctcatcattcag 12712530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 26091851 - 26091670
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  26091851 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 26091752  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  26091751 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 26091670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 40924870 - 40924689
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  40924870 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 40924771  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  40924770 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 40924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 65 - 198
Target Start/End: Complemental strand, 13965673 - 13965540
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    |||| |||||||| |||||||| ||||||||  | |||||||||  |||||||||||| |||||| |||||||||||||||||||||||  |||||||||    
T  13965673 tgtgacccttctgaccacacctgaagcattttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagc 13965574  T
Q  165 aggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||||||||||||||||||| ||||||    
T  13965573 aggagcatctctcctcttgggcctcctatcatca 13965540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 13024542 - 13024734
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| ||||| || |||||||| |||||||| |||||||   ||||||| ||||  |||||||| || |||||| |||||| | ||  | || |||    
T  13024542 ttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctaaccacacctgaaacatttcctctcatatctaccataagcat 13024641  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    | |||||||||||||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  13024642 tgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgct 13024734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 14261300 - 14261113
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| | |||||||||| | ||||||||||||  |  ||  |    
T  14261300 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagtacttcttctcatctcgatgacgca 14261201  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  14261200 cattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctctcatcattcag 14261113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 49155497 - 49155671
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  | || |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  49155497 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 49155596  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcct 191  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  49155597 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 26115623 - 26115462
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  26115623 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 26115524  T
Q  137 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  26115523 caccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatca 26115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 21755608 - 21755789
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || || || || |||||||| ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||    
T  21755608 cattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaac 21755707  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||| || ||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||||| |||||| | ||||||    
T  21755708 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatca 21755789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 110 - 202
Target Start/End: Complemental strand, 12203760 - 12203668
Alignment:
Q  110 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||| ||||||||||||| || ||||||||||||||||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattca 12203668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 14144886 - 14145040
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||| | ||| ||||| || |||||||| ||||| |||||||| || || |||||||| ||||| |||||||||||||| ||| |||    
T  14144886 cgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtggcctttctcgccatact 14144985  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  | ||||  ||||||||||||||||||||||| |  |||||||||||||||||    
T  14144986 taaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcatt 14145040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 12798555 - 12798372
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| |  || || |||| ||||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||    
T  12798555 tcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaa 12798456  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||    ||||||||| | |||| ||| |||| | ||||||||||||||||| ||||||||||||||||||    
T  12798455 cattactcttgtggcctttt---ccacacttgaaacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattca 12798372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 18050977 - 18050823
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  18050977 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 18050878  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  18050877 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 18050823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 108 - 209
Target Start/End: Original strand, 15627810 - 15627911
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctt 207  Q
    ||||||| | ||||| |||||||||||||||||||| |||||||||| ||  |||||||||| |||| || |  | |||||| |||||||||||| ||||    
T  15627810 agtacaagcgttactcttgtggcctttctcaccacagttgtagcaaacaacttcagcaggagtatctttctttctaggcctcttctcatcattcaccctt 15627909  T
Q  208 tg 209  Q
    ||    
T  15627910 tg 15627911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 11984273 - 11984343
Alignment:
Q  103 tctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||| |||||||||||| || |||||||||||||||||||| ||| | |||  ||||||||| ||||||||    
T  11984273 tcttcagtacaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 11984343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 140; Significance: 2e-73; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 39403 - 39208
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  39403 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 39304  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39303 cattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgct 39208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 172
Target Start/End: Complemental strand, 180903 - 180753
Alignment:
Q  22 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 121  Q
    |||||| | ||||| || ||||| ||||| |||||||| || |  || |||||||| || || || || |||||||||||||||| ||| ||| ||||||    
T  180903 cagttaaaacaaacaatatctccacgcttgcaatcagccaacacatgacccttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattac 180804  T
Q  122 ttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 172  Q
    | |||||||| ||| ||||||| ||||| |||| || |||| |||||||||    
T  180803 tcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 180753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 14753 - 14815
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||| ||||| ||||||||| | |||| |||||| |||||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagcatc 14815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 5244 - 5298
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 165  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  5244 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 5298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 139; Significance: 7e-73; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 2022 - 1832
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  2022 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 1923  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  1922 cattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcct 1832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 31 - 200
Target Start/End: Complemental strand, 11961 - 11792
Alignment:
Q  31 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 130  Q
    ||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||    
T  11961 caaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggc 11862  T
Q  131 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| ||||||||||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  11861 ctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcatt 11792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 202
Target Start/End: Original strand, 70684 - 70792
Alignment:
Q  94 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 193  Q
    |||||||||||||| || || |||||||  |||||||||||| ||||||||||||| |||| ||  ||| ||||||||||||||| | | |||| |||||    
T  70684 ttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctct 70783  T
Q  194 catcattca 202  Q
    |||||||||    
T  70784 catcattca 70792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 4e-68; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 12357822 - 12357632
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| |    
T  12357822 tcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaga 12357723  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| ||||||||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12357722 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcct 12357632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 18131642 - 18131455
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||||| ||||  || || |||||||||| |||||||  |||||| ||||| |||||||| ||||| |||||||||||||||  |||||    
T  18131642 tcattgcagttatagcacactacatccccacgcttacaattagctaatgcgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaa 18131543  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  18131542 cattactcttgtggcctttctcgccacacttgtagcaatcaatctcaacaggagcatctctcctcttgggcctcctctcattattcag 18131455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 46 - 206
Target Start/End: Complemental strand, 14290797 - 14290637
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| ||||||||||||||||||||||    
T  14290797 cgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttctcaccacact 14290698  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    || |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  14290697 tgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 14290637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 17494484 - 17494664
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||||||||| |||||||| | |||||| ||||||| | ||||||| ||||| |||||||| | ||| |||||||||||| ||  ||||||||    
T  17494484 ttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtcctttctgaccacacctga-gcacttcttctcatctctatcacaaacat 17494582  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||||||| |||||||| ||| |||||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  17494583 tactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 31941737 - 31941923
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||| ||||| ||||| |  || || ||||| || |||||||   ||||||||||||| |||||||| || || |||||||||||||| |||||||    
T  31941737 tcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttggtacaaa 31941836  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||||||||||||||| |||||| ||||||||||||||||||||||    
T  31941837 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattca 31941923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 31692480 - 31692294
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  || || | ||| || |||||||   ||||||||||||  |||||||| || || |||||||||||||| |||||||    
T  31692480 tcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtcccttctaaccacacctgaaacacttcttctcatctttggtacaaa 31692381  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||||||||||||||||| ||||  |||||||||| ||||| |||||| ||||||||||||||||||||||    
T  31692380 cattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattca 31692294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 35983015 - 35983205
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |    
T  35983015 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacaca 35983114  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||    
T  35983115 cattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggagcatctctcctcttaggcctcctctcatcattcagcct 35983205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 47126779 - 47126960
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  47126779 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 47126878  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  47126879 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 47126960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 28757174 - 28757335
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  28757174 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 28757273  T
Q  137 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  28757274 caccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 28757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 16327003 - 16326807
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  ||||||||||||| |||||||| || |||||| |||||||| ||  ||||||    
T  16327003 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgtcccttctgaccacacctgaaacatttcctctcatctctaccacaaac 16326904  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaa-tctcagcaggagca-tctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||| || ||||||||||| ||||||||||| || |||| || |||||||||||||| |||||||||||||| ||||| |||||||||| | ||||||    
T  16326903 attgctcttgtggcctttttcaccacacttataacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttttgct 16326807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 65 - 200
Target Start/End: Original strand, 17189257 - 17189392
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  | |||| ||| ||| |    
T  17189257 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 17189356  T
Q  165 aggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||||||||||||||||||| |||||||||||||||    
T  17189357 aggagcatctctcctcttggacctcctctcatcatt 17189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 10408803 - 10408984
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  10408803 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 10408902  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| |||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  10408903 attactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 10408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 11949220 - 11949107
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||    
T  11949220 tcattgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaa 11949121  T
Q  116 cattacttttgtgg 129  Q
    ||||||| ||||||    
T  11949120 cattactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 12181181 - 12181362
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||| ||||| ||||| ||||| ||  ||||||||||||||| | ||||||| ||| | ||||| || ||||| |||||||||||| ||  ||| || |    
T  12181181 ttgcaattataacaaacaatgtccccaagcttacaatcagctagtgtgtgtcctttccgaccacaactgaagcacttcttctcatctctatcacagactt 12181280  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||||||| |||||||||||| |||||| ||| |||| |||||||||||||||||||| |||||||||||||||    
T  12181281 tactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatt 12181362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 202
Target Start/End: Original strand, 24190187 - 24190324
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||||| ||||||||  | |||| ||| ||| |    
T  24190187 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaac 24190286  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||||||||||||||  |||||||||||||||||    
T  24190287 aggagcatctctcctcttgtacctcctctcatcattca 24190324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 16384637 - 16384483
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||| ||||||| |||||||    
T  16384637 cgcttgcaatcagccaacatgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacact 16384538  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  | ||||  ||||||||||||||||||||||| || |||||||||||||||||    
T  16384537 taaaacaaactatctcagcaggagcatctctcctattcggcctcctctcatcatt 16384483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 16825574 - 16825388
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||| |||| |||||||| ||||| || |||||||||||||||||  ||||||| || |  |||||||| ||||| |||||||||||      |||||    
T  16825574 tcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtccttttttaccacacctgaagcacttcttctcatcacggtcacaaa 16825475  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||| |||||||||||| | |||| ||| |||| ||||||||||||| ||||||||||||||||||| ||||    
T  16825474 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttca 16825388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 16831769 - 16831639
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | ||||  |||||||||||||    
T  16831769 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 16831670  T
Q  170 catctctcctcttgggcctcctctcatcatt 200  Q
    |||||||||| || |||||||||||||||||    
T  16831669 catctctcctattcggcctcctctcatcatt 16831639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 11958473 - 11958290
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| ||||| || |||||  | |||||||| ||||||| | | ||||| ||||| |||||||| || || ||| |||||||| ||  |||| |||    
T  11958473 ttgcagttgtagcagacaatgtcctcacgcttacattcagctagtgtatgtcctttctgaccacacctgaaacacttcctctcatctctaccacaagcat 11958374  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | |||||||||||||| ||||||||||| || |||| ||| |||||||||||||||||||||||  ||||||| ||||||||||    
T  11958373 tgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattca 11958290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 15008783 - 15008684
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||  |||||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 2037111 - 2037025
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  2037111 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2037025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 2040852 - 2040766
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  2040852 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 2040766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 14039676 - 14039762
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  14039676 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 14039762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 200
Target Start/End: Complemental strand, 13317786 - 13317680
Alignment:
Q  94 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 193  Q
    |||||||||||||| || |||||||||||||||||||||||  ||||||||||||| |||| ||  ||| ||||||||||||||| | | ||||||||||    
T  13317786 ttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggcctcctct 13317687  T
Q  194 catcatt 200  Q
    |||||||    
T  13317686 catcatt 13317680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 15230531 - 15230621
Alignment:
Q  110 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||| ||||| | ||||| |||||||||||||||||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatt 15230621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 15236399 - 15236489
Alignment:
Q  110 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||||||||| |||||||| || ||||||||||||||||||| ||||||||||||| ||||| | ||||| |||||||||||||||||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatt 15236489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 8744655 - 8744501
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  8744655 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 8744556  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  8744555 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 8744501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 13944888 - 13945042
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  13944888 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 13944987  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  13944988 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 13945042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 12857761 - 12857604
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagt-acaaacattacttttgtggcctttctcaccacac 144  Q
    ||||| || ||||||| ||||||||| |||| |||||| |  || || |||||||||||   ||| ||| ||||||||  ||||||| || |||||||||    
T  12857761 cgcttgcactcagctattatgtgtcctttctttccacatcggaaacacttcttctcatcac-agtcacatacattactcatgtggcccttttcaccacac 12857663  T
Q  145 ttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||| | || | |||||||| ||||||||||||||| || ||||||||||||||||||||    
T  12857662 ttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcag 12857604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 12843314 - 12843227
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| ||||||||||| || || | |||| ||||||||||    
T  12843314 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatctttcttcctaggccgcctctcatca 12843227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 19727686 - 19727770
Alignment:
Q  118 ttacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||| || |||||||||||||||||  | ||||||| ||||||||||  | ||||| || | || |||||||||||||||||||    
T  19727686 ttactcttatggcctttctcaccacaagtatagcaaacaatctcagcaacaacatctttctttttaggcctcctctcatcattca 19727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 10417265 - 10417202
Alignment:
Q  91 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 154  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| ||||    
T  10417265 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaa 10417202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 15262549 - 15262640
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||||| || | |||||||||||||||  | ||||| | ||||||| ||||||||||| ||||  |  ||||||||||||||||||    
T  15262549 acaagcattactcttatagcctttctcaccacaagtatagcagacaatctcaacaggagcatctttccttctacgcctcctctcatcattca 15262640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 173
Target Start/End: Original strand, 12501788 - 12501914
Alignment:
Q  47 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 146  Q
    |||| |||||||||||| |||| |||||||  |||||||  || ||||||||  | || | || ||||||||| || |||||||||||||| ||||| ||    
T  12501788 gcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcaggacaaacattgctcttgtggcctttctcgccacaatt 12501887  T
Q  147 gtagcaaagaatctcagcaggagcatc 173  Q
    | | ||   ||||||||||||| ||||    
T  12501888 gaaacaggtaatctcagcaggaacatc 12501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 16804158 - 16804096
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||| | |||  ||||||||| ||||||||    
T  16804158 acaaacattgctcttgtggcctttctcaccacaattgaaacaagtaatctcagctggagcatc 16804096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 23079228 - 23079166
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||  | |||| |||| |||||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagcatc 23079166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 23415009 - 23414939
Alignment:
Q  103 tctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||| |||||||||||| |||||||||||||| ||| | ||| | || | |||||| |||||||||||    
T  23415009 tctttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagcatc 23414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 9091 - 8896
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9091 tcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 8992  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8991 cattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgct 8896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 1e-61; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 22027790 - 22027595
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||| ||||||||||||| | |||||||| |||||||||||||||| |||| |||||||| |||||||| ||||| |||||||||||||| |||||||    
T  22027790 tcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtgacccttctgaccacacctgaagcacttcttctcatctttggtacaaa 22027691  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| ||||||||||| || ||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  22027690 cattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgct 22027595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 31414039 - 31413856
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| ||||| || |||||||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| |||    
T  31414039 ttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcat 31413940  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | || || |||||||| |||||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  31413939 tgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 31413856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 28984183 - 28984364
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  28984183 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 28984282  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||    
T  28984283 attactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatca 28984364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 70 - 198
Target Start/End: Complemental strand, 16268680 - 16268552
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    |||||||| |||||||| ||||| ||| |||||||||||  |||||||||||| |||||||||||||||||||||||||| |||| |||||||| |||||    
T  16268680 cccttctgaccacacctgaagcacttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggag 16268581  T
Q  170 catctctcctcttgggcctcctctcatca 198  Q
    |||||||| |||| |||||||| ||||||    
T  16268580 catctctcttcttaggcctcctgtcatca 16268552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 22054164 - 22054318
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||| | ||| |||||||| ||||| || ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  22054164 cgcttgcaatccgctaaaaggtgacccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 22054263  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  | ||||  |||||||||| |||||||||||| || |||||||||||||||||    
T  22054264 taaaacaaactatctcagcagaagcatctctcctattcggcctcctctcatcatt 22054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 6606883 - 6606784
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||||||||  |||||||    
T  6606883 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 6606784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 29300936 - 29300750
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||| | || ||||| || |||||||| ||||||| | |||||||  |||| ||||||||||| || ||| | |||||| ||  ||||     
T  29300936 tcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctctctgaccacacctaaaacacttcctttcatctctaccacaag 29300837  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || ||||||||| | |||||||||||  | |||| ||| ||||| ||| |||||| ||||||||||||||| ||||||||||    
T  29300836 cattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattca 29300750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 113 - 202
Target Start/End: Original strand, 20391454 - 20391543
Alignment:
Q  113 aaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||||||||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattca 20391543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 209
Target Start/End: Original strand, 22374149 - 22374333
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    ||||||||||| || || || ||||| |||||||||||| ||||||| |||| |||||||||||| || ||||| |||||      ||| |||||||| |    
T  22374149 ttatagcaaacaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactct 22374248  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttg 209  Q
    ||||| |||| |||||||||||| | || | |||||||| ||||| |||||||||| | ||||||||||| ||||| || |||||    
T  22374249 tgtggtctttttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttg 22374333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 21928748 - 21928889
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||||||||| || || || ||||||||||||     ||  |||||||| | |||||| || || ||||||||| | |||||||||||||     
T  21928748 tgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacttacattactctcgtggcccttttcgccacacttgaaacaaagaatctcagt 21928847  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  21928848 aggagcatctctcctcctaggcctcctctcatcattcagcct 21928889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 198
Target Start/End: Original strand, 19985487 - 19985633
Alignment:
Q  52 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 151  Q
    |||||||||||| ||||||  ||||||||||| || ||  | |||||||||||      ||| |||||||| ||||||| ||| || ||||||||| | |    
T  19985487 caatcagctaatgtgtgtcatttctgtccacatctgaaatacttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttgaaac 19985586  T
Q  152 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||| |||||||| |||||||||||||||||| |||||||||||||||    
T  19985587 aaacaatctcagtaggagcatctctcctcttaggcctcctctcatca 19985633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 21671881 - 21671944
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  21671881 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 21671944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 22043193 - 22043255
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||||||||| ||| | |||  ||||||||  ||||||||    
T  22043193 acaaacattactcttgtggcctttctcaccacaattgaaacaagtaatctcagttggagcatc 22043255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 30310559 - 30310497
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| ||| || |||||||||||    
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatc 30310497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 22523876 - 22523965
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| |||||||  ||||||||||||| |||||  | ||||| | ||||||| ||||||||||| || || | |||| ||||||||||||    
T  22523876 acaagcattactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcatt 22523965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 22421308 - 22421276
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccaca 143  Q
    |||| ||||||||||||||||||||||||||||    
T  22421308 acaagcattacttttgtggcctttctcaccaca 22421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 116; Significance: 4e-59; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 20833039 - 20832844
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  ||||||| ||| |||||||||| | ||||||| ||||| |||||||| || || ||||||||||||||||||||||    
T  20833039 tcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtcctttctgaccacacctgaaacaattcttctcatctttagtacaaa 20832940  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  20832939 cattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgct 20832844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 19857525 - 19857720
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||| | ||||||| ||||| |||||||| |||||||||||||||||| ||  ||| |    
T  19857525 tcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaga 19857624  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| ||||||||||| |||||||||||| |||||| |||||| | || ||||||||||||||| ||||||||||||||||||| ||| ||||    
T  19857625 cattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgct 19857720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 24096751 - 24096568
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| ||||| || |||||||| ||||||| | ||||||| ||||| ||||||||||| || ||| |||||||| ||  |||| |||    
T  24096751 ttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacacttcctctcatctctaccacaagcat 24096652  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||||||||| |||||||||||| | |||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  24096651 tactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattca 24096568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 21961279 - 21961464
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || || || || |||||||| ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  ||||||    
T  21961279 cattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaac 21961378  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||||||| ||||| ||||||||||    
T  21961379 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattca 21961464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 21739145 - 21738989
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||| ||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  |||||||||||| ||||||||||||||||||||||    
T  21739145 cgcttacaatcaactaaggtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttctcaccacact 21739046  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    || |||||| |||||||| ||||||| |||||||||| |||||||||||||||||||    
T  21739045 tgaagcaaataatctcagtaggagcacctctcctcttaggcctcctctcatcattca 21738989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 203
Target Start/End: Complemental strand, 21742691 - 21742504
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| |  || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||     ||| |    
T  21742691 tcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcggtcacata 21742592  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  21742591 cattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 21742504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 20297635 - 20297816
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || ||||| || |||||||   |||| |||||||  |||||||| ||||| ||| |||||||||||  ||||||    
T  20297635 cattgcagttgtagcagacaatgtccccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagcacttcctctcatctttaccacaaac 20297734  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  20297735 attactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatca 20297816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 52988993 - 52989178
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  |||| |||||||| |||||||| || || ||| |||||||||||  ||||||    
T  52988993 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacacttcctctcatctttaccacaaac 52989092  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || ||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  52989093 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 52989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 38909964 - 38909783
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  38909964 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 38909865  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  38909864 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 38909783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 48426125 - 48426306
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  48426125 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 48426224  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  48426225 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 48426306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 31537135 - 31536941
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||    
T  31537135 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaac 31537036  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||| || ||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||||||| ||||| |||||||||| ||| ||||    
T  31537035 attgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgct 31536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 37680321 - 37680482
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  37680321 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 37680420  T
Q  137 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||    
T  37680421 caccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcctatcatca 37680482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 20074847 - 20074666
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || || || || ||||| || ||||| ||  |||| |||||||| |||||||| ||||| ||| ||||||||||| |||||||    
T  20074847 cattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtgacccttctgaccacacctgaagcacttcctctcatctttactacaaac 20074748  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||| || |||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||  ||||||| ||||||    
T  20074747 attgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatca 20074666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 22015881 - 22015700
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||| ||||| |  || || ||||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||||    
T  22015881 ttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaacat 22015782  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| |||||||| || ||||||||| | |||| ||| |  | ||||||||||||| |||| |||||||||||||||||    
T  22015781 tacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagcatctctcttctttggcctcctctcatcatt 22015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 18273114 - 18273213
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||| ||||||| ||||| || ||||||||||||||||  |||||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 20853884 - 20853713
Alignment:
Q  31 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 130  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20853884 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20853785  T
Q  131 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | ||| ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||||||||||||||    
T  20853784 ccttcacaccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcctctcatcattca 20853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 16379406 - 16379498
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||||||||||||||||||||||||||||||||    ||||||| ||||||||||  | ||||| || |  | |||||||||||||||||    
T  16379406 agtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcatt 16379498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 21228600 - 21228538
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 21228538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 21 - 211
Target Start/End: Original strand, 319482 - 319672
Alignment:
Q  21 gcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacatta 120  Q
    ||||||||| ||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||||||||||  ||| ||||||    
T  319482 gcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacatta 319581  T
Q  121 cttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    || |||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  319582 ctcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgct 319672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 325941 - 326135
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  |||||||||||||||| ||||||| ||||||| ||||| |||||| | ||||| |||||||||||||||  ||| |    
T  325941 tcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacttgaagcacttcttctcatctttatcacaga 326040  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| ||||    
T  326041 cattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggagcatctctcctatt-ggcctcctctcatcattcagcctctgct 326135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 200451 - 200361
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||  |||| | ||||| ||||| || ||||||||||||||||    
T  200451 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcattaggaacttctcttctcttaggtctcctctcatcattca 200361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 5279 - 5084
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  |||| ||||||||||||||||||  ||||||||||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  5279 tcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgtcccttctgaccacacctgaagcacttcttctcatccttatcacaga 5180  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||||||||||||    
T  5179 cattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgct 5084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 112; Significance: 9e-57; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 153726 - 153913
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  153726 tcattgcagttatagcaaacaatgtctccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 153825  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| || |||| ||| |||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  153826 cattactcttatggcttttttcaccacacttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcag 153913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 23508 - 23417
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||  | ||||| |  |  | |||||||||||||||||||    
T  23508 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttatttctaggcctcctctcatcattca 23417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 111; Significance: 3e-56; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 5287 - 5473
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||| ||||||| ||||  |||||||| ||||| |||||||||||||||  ||| |    
T  5287 tcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctttatcacaga 5386  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||  ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  5387 cattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattca 5473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 3e-56; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 24515626 - 24515436
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  ||||||| ||| |||||||||| | ||||||  ||||| |||||||| || || ||||||||||||||||||||||    
T  24515626 tcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaaacacttcttctcatctttagtacaaa 24515527  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| ||||||||||||||||||||||| || |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  24515526 cattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcct 24515436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 19456095 - 19456285
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19456095 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19456194  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttg 209  Q
    |||| ||||||||||| |||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19456195 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttg 19456285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 19 - 209
Target Start/End: Original strand, 19466240 - 19466430
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||||||||| |||||||| |||||||||||| ||| | ||||||| ||||| |  ||||| ||||| |||||||||||| ||  ||| ||||    
T  19466240 ttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttcttctcatctctatcacagacat 19466339  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttg 209  Q
    |||| ||||||||||| |||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  19466340 tactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttg 19466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 14377128 - 14376942
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  || || |||||||||| ||||||  ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  14377128 tcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 14377029  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||  ||| |||||||||||||||| ||||| ||||||||||||||||    
T  14377028 cattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggagcatctctcctattgggtctcctctcatcattca 14376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 13 - 211
Target Start/End: Original strand, 18797756 - 18797954
Alignment:
Q  13 tcatcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtac 112  Q
    ||||||||||||||||||||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || ||||||| |||||||||||| |    
T  18797756 tcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacatttctgctcatctttagtgc 18797855  T
Q  113 aaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    |||||||||| |||||||||||||| |||||||| || |||| ||| ||  |||||||||| ||||||||||||||||||||||||||||  |||||||    
T  18797856 aaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgct 18797954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 10466060 - 10465874
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||||| || ||||| || |||||||| |||||||   ||||||||||||| ||||||||||| |||||| |||||||| ||  ||||     
T  10466060 tcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtcccttctgaccacacctaaaacatttcctctcatctctaccacaag 10465961  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || ||||||||||| |||||||||||||| || | ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10465960 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattca 10465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 21567154 - 21567016
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||  || |||||    
T  21567154 tgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagc 21567055  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21567054 aggagcatctctcctcttgggccttctctcatcattcag 21567016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 46 - 200
Target Start/End: Original strand, 19438101 - 19438255
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || || ||||||||||||||||||||||||||   ||||||||||||||||||||    
T  19438101 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacact 19438200  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| | ||  ||||||||||||||||||||||||||||||||||||||||||||    
T  19438201 tgtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatt 19438255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 24367490 - 24367651
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| |||||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  24367490 atgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 24367589  T
Q  137 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||    
T  24367590 caccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcctatcatca 24367651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 203
Target Start/End: Complemental strand, 34642797 - 34642610
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || || || || || |||||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  34642797 cattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 34642698  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctctt-gggcctcctctcatcattcag 203  Q
    ||||||||||||||| ||||| ||||||||  ||||||  ||||| |||||||  ||||| | ||| ||| ||||| |||||||||||    
T  34642697 attacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggagtgtctcttcccttggggtctcctttcatcattcag 34642610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 8720821 - 8720731
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||| |||||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattca 8720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 16813805 - 16813895
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||    
T  16813805 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattca 16813895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 19486410 - 19486311
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||| ||||||| ||||| || ||||||||||||||||  |||||||    
T  19486410 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 19486311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 21474768 - 21474857
Alignment:
Q  115 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagc 204  Q
    |||||||| ||||||||||| |||||||||||| | |||| |||||||| |||||||||||||||| | |||||||||||||||||||||    
T  21474768 acattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagc 21474857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 206
Target Start/End: Original strand, 25771021 - 25771103
Alignment:
Q  124 ttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||||||| |||||||||||| | || | |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  25771021 ttgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 25771103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 30678141 - 30678041
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||||||||||| |||||||  |||||||||||||||||||||| || ||||||||||| |||| || |  | ||||||||||||||||||| |||||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 30678042  T
Q  211 t 211  Q
    |    
T  30678041 t 30678041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 25958856 - 25958770
Alignment:
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||||||| ||||| || ||||||||||||| ||| |||||||    
T  25958856 tgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgct 25958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 23081587 - 23081676
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||| ||||||||||||||||||||  | || |||| ||||||| ||||||||||| || || | |||| ||||||||||||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcatt 23081676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 20010699 - 20010527
Alignment:
Q  31 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 130  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||    
T  20010699 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggc 20010600  T
Q  131 ctttctcaccacacttgtagcaa-agaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | ||| ||||||| ||||| ||| | ||  ||| ||||||||| ||||| ||| |||  ||||||||||||||    
T  20010599 ccttcacaccacatttgtaacaatacaacatcaacaggagcatttctccccttaggctgcctctcatcattca 20010527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 149
Target Start/End: Original strand, 15462411 - 15462538
Alignment:
Q  22 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 121  Q
    |||||||| || || || ||||||||||| || ||||| || |  || || ||||| || || || || ||||||||||||||| | || || |||||||    
T  15462411 cagttataacacacgatatctccccgcttgcactcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattac 15462510  T
Q  122 ttttgtggcctttctcaccacacttgta 149  Q
    | |||||||||||| |||||||||||||    
T  15462511 tcttgtggcctttcgcaccacacttgta 15462538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 27559142 - 27559029
Alignment:
Q  55 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 154  Q
    ||||||||| |||| |||||||  |||||||  || || |||||| | || | || ||||||| |||| |||||||||||||||||||| ||| | |||     
T  27559142 tcagctaatgtgtgacccttcttgccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaag 27559043  T
Q  155 gaatctcagcagga 168  Q
     |||||||||||||    
T  27559042 taatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 21764976 - 21765038
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 21765038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 5e-55; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 16150847 - 16151027
Alignment:
Q  22 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 121  Q
    |||||||||||||| |  || || ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  16150847 cagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattac 16150946  T
Q  122 ttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | |||||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  16150947 tcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16151027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 16154993 - 16155173
Alignment:
Q  22 cagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattac 121  Q
    |||||||||||||| |  || || ||||| |||||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  16154993 cagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattac 16155092  T
Q  122 ttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | |||||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  16155093 tcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattca 16155173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 18259646 - 18259830
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| ||||| || ||||||||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  18259646 tcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 18259745  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| ||||||||||| |||||||||||  |||||| ||| | || |||||||||| |||||||||||||||||||||||||    
T  18259746 cattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatt 18259830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 7357473 - 7357654
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || |||||||| ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| |||||||||||  | ||||    
T  7357473 cattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagcacttcctctcatctttaccataaac 7357572  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||| || ||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  7357573 attgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 7357654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 3261860 - 3261679
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  3261860 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 3261761  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  3261760 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 3261679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 15266984 - 15267165
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||||||||| ||||||||  |||||||||||||||   ||||||| ||||| |||||||| ||||| |||||||||||| |   ||||||||    
T  15266984 ttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctctgtcacaaacat 15267083  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| || ||||| |||||| |||||||| |||||| ||| |  | ||||||||||||||||||||||||||||||||||||    
T  15267084 tactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatt 15267165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 20893236 - 20893422
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||| ||| | || || || || ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||| ||  |||||    
T  20893236 tcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaaa 20893335  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || |||| |||||| |||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  20893336 cattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 20893422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 44658903 - 44658753
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| ||||||||||||||||||||||    
T  44658903 cgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttctcaccacact 44658804  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcat 196  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  44658803 tgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcat 44658753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 29450603 - 29450422
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| || || ||| | ||||||     ||||||    
T  29450603 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaacacttcctatcatctcctccacaaac 29450504  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||||    
T  29450503 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcctatcatca 29450422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 14993434 - 14993248
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||| |||||||| |  || ||  |||| |||||||||||  ||||||| ||||| |||||||| ||||| |||||||  ||      |||||    
T  14993434 tcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttcttctcacggtcacaaa 14993335  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||| |||||||||||| | |||| ||| |||| ||||||||||||||||||||||||||||||||||||||    
T  14993334 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattca 14993248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 202
Target Start/End: Complemental strand, 11204250 - 11204113
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    |||| |||||||| |||||||| ||||||||  | |||||| ||  ||||||||| || ||||||||||||||||||||||| || |||| ||||||||     
T  11204250 tgtgacccttctgaccacacctgaagcattttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcaga 11204151  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  11204150 aggagcatctctcctcttgggtctcctatcatcattca 11204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 15073595 - 15073751
Alignment:
Q  47 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 146  Q
    |||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| ||||||||||| |||||||||||    
T  15073595 gcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctttttcaccacactt 15073694  T
Q  147 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    | | || | |||||||| |||||||||||||||| | ||||||||||||||||||||    
T  15073695 gaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcag 15073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 8708978 - 8709077
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||| | ||||| || ||||||||||||||||  |||||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 27903590 - 27903776
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| |||||||| ||||| || ||||| ||||| || ||||| || |  || || ||||| ||||| || || || |||||||||||||| || || |    
T  27903590 tcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttctgaccacatctgaaacacttcttctcatctttggtgcaga 27903689  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||| ||||||||||||| |||| ||  ||| ||||||||||||||| | | |||| ||||||||||||||    
T  27903690 cattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattca 27903776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 51603829 - 51603675
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  51603829 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 51603730  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  51603729 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 51603675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 53750507 - 53750353
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| |||||||    
T  53750507 cgcttgcaatcggctagcatgtgacccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacact 53750408  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  |||| |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  53750407 taaagcacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 53750353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 213
Target Start/End: Original strand, 13879368 - 13879511
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    ||||||| |||||| |  ||||| |||||||| || | | | || |||||||| |||||||| ||||||||||||||||| |||| |||||||| || |     
T  13879368 cccttctttccacatcggaagcacttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaa 13879467  T
Q  170 catctctcctcttgggcctcctctcatcattcagcctttgctac 213  Q
    ||||||| ||||| || ||||||||||||||||  |||||||||    
T  13879468 catctcttctcttaggtctcctctcatcattcaatctttgctac 13879511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 14697401 - 14697501
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||||||| ||||||| || |  | |||||||||||||||||||  ||||||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgc 14697500  T
Q  211 t 211  Q
    |    
T  14697501 t 14697501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 8336 - 8399
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  8336 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 15743 - 15685
Alignment:
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  15743 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 15685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 18224185 - 18224123
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||  |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18224123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 9842 - 9647
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  |||||||||||||||||| |||   ||||||| ||||| |||||||| ||||| ||||||||||| |||  ||| |    
T  9842 tcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtcctttctgaccacacctgaagcacttcttctcatccttatcacaga 9743  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| || ||||||||||||||||||| ||||||||    
T  9742 cattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattcatcctttgct 9647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 107; Significance: 8e-54; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 37173 - 37359
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| || || || | |||||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||||||  |||||    
T  37173 tcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctttatcacaaa 37272  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||||| ||||||||| |||||| ||| |||| |||||  |||||||||||||||||||||||||||||||    
T  37273 cattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattca 37359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 7302 - 7467
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  7302 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 7401  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  7402 tgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgct 7467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 882 - 701
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||| ||||| ||||| || |||||||||||||||| | ||||||||||||| |||||||| ||||| |||||||||||| ||  ||||||||    
T  882 ttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcccttctgaccacacctgaagcacttcttctcatctctatcacaaacat 783  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||||||| |||||||||||| |||||  ||| || | ||||||||||||||||||||||||||||||||||||    
T  782 tactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagcatctctcctcttgggcctcctctcatcatt 701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 34571 - 34766
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| | ||| || |||||||||||| ||||| ||||||| ||||  |||||||| ||||| |||||||||||| ||  ||| |    
T  34571 tcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtcctttctaaccacacctgaagcacttcttctcatctctatcacaga 34670  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||||||||||||||||||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||| | ||||||||    
T  34671 cattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgct 34766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 4493 - 4339
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||||||||| ||||||| ||||| |||||||| |||||||||||||||||| ||  |||||||||||| || ||||||||||| |||||||    
T  4493 cgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctcgccacact 4394  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    || |||||| ||| |||| ||||||||||||||||||||||||||||||||||||    
T  4393 tgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatt 4339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 17097 - 16979
Alignment:
Q  55 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 154  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||| | || |  | ||||||| | || |||||||||||||||||||| ||| | |||     
T  17097 tcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacctcctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaag 16998  T
Q  155 gaatctcagcaggagcatc 173  Q
     ||||||||||||| ||||    
T  16997 taatctcagcaggaacatc 16979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 204
Target Start/End: Original strand, 8851 - 9036
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| ||||| || ||||| ||||||||||   ||||||| ||||| |||||||| || || |||||||||||||||||||||||||    
T  8851 ttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacat 8950  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagc 204  Q
    |||| |||||||| ||||| |||||||| || |||| ||||||| |||||||||||||||||||||| || |||||||||||||||    
T  8951 tactcttgtggccattctcgccacacttataacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagc 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 4889 - 4724
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||| |||||||||||||  |||||||    
T  4889 cgcttgcaatcagctaacatgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacact 4790  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    | || || |  ||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  4789 tataacagactatctcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgct 4724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 17517 - 17361
Alignment:
Q  53 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagca 152  Q
    |||| |||||| |||| ||||| ||  ||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||| || ||    
T  17517 aatccgctaatgtgtgacccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataaca 17418  T
Q  153 aagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttg 209  Q
    ||  ||||||||||||||||||||||| || |||||||||||||||||||| |||||    
T  17417 aactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttg 17361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 209
Target Start/End: Original strand, 22356 - 22549
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||||||||| |  || || ||||| |||||| |||   ||||||| ||||| |||||| | ||||||||||||||||| |||||| |||    
T  22356 tcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgtcctttctgaccacacttgaagcatttcttctcatccttagtaaaaa 22455  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttg 209  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||||| |||||||||||||||| ||||||||||||||||||||||| |||||    
T  22456 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtctttg 22549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 939 - 755
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||||||||| ||||| || |||||||||||||||| | ||||||| ||||| |||||| | ||||| |||||||||||| ||  ||| ||||    
T  939 ttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttcttctcatctctatcacagacat 840  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||| ||||||||||| |||||||||||| |||||| ||| ||   |||||||||||||||||||||||||||||||||||||||    
T  839 tactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcatcattcag 755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 8532 - 8337
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  8532 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 8433  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||| ||||| |||||||| || |||| ||| ||| || ||||||||||||||||||| |||||||||||||||||||| ||||    
T  8432 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgct 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 18746 - 18551
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| | ||| || ||||| ||||||||||   ||||||||||||| |||||||| || || ||||||||||| ||||||||||    
T  18746 tcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatccttagtacaaa 18647  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||| ||||| |||||||| || |||| ||| ||| || ||||||||||||||||||| |||||||||||||||||||| ||||    
T  18646 cattactcttgtggccattctcgccacacttataacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgct 18551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 4374 - 4188
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| |    
T  4374 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 4275  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||||||| | ||||||||||||||||| |||||| |||||||| |||||||||||||||||| |||||||||||||||||||    
T  4274 cattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattca 4188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 115797 - 115983
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    ||||||| |||||||| ||||| || || ||||| ||||||||||| | ||| ||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  115797 cattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgacccttctgtccacacctgaagcacttcttctcatctttggtacaaac 115896  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||||||||||| ||||||||  ||||||  || ||||||||||  ||||| | ||||||||| ||||||||||||||    
T  115897 attacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagtgtctcttcccttgggccttctctcatcattcag 115983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 93889 - 93808
Alignment:
Q  91 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 172  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| |||| || |||| |||||||||    
T  93889 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagcat 93808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 98623 - 98469
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||||||||   ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  98623 cgcttgcaatcagctagagtgtgtcctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacact 98524  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  98523 tgtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatt 98469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 25 - 203
Target Start/End: Original strand, 176230 - 176408
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    ||||||||||| |  || || ||||| |||||||||||| ||||||| |||| |||||||||||| || |||||||||||      ||| |||||||| |    
T  176230 ttatagcaaacaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactct 176329  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||| |||||||||||| | || | |||||| | |||||||||||||||| | ||||||||||||||||||||    
T  176330 tgtggcctttttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcag 176408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 15306 - 15490
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  || || ||||| ||||||||||   ||||||  ||||| |||||||| ||||| |||||||| || ||||||||||    
T  15306 tcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagcacttcttctcgtccttagtacaaa 15405  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| |||||||||||||| |||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||    
T  15406 cattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcctctcatcatt 15490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 953 - 769
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||||||  |||| ||||| || ||||||||||||||||   ||| ||| ||||| |||||||| ||||| |||||||||||| ||  |||||    
T  953 tcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatcctttctgaccacacctgaagcacttcttctcatctctatcacaaa 854  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    | ||||| ||||||||||| |||||||||||| |||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  853 cgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatt 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 23563417 - 23563237
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| |||||  ||||||| | |||||| ||||||| | ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||| |    
T  23563417 tcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaga 23563318  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcat 196  Q
    ||||||| ||||||||||| |||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  23563317 cattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagcatctctcctcttgggcctcctctcat 23563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 23078151 - 23077968
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| |||||||| |||||||| |||||||   ||||||| ||||| |||||||| || |||||| |||||||| ||  |||| |||    
T  23078151 ttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatctctaccacaagcat 23078052  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | |||||||||||||| |||||||||||| | || | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23078051 tgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 23077968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 22505799 - 22505984
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  | |||||| |||| |||||||| ||||| ||| |||| ||||||  ||||||    
T  22505799 cattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagcacttcctctcgtctttaccacaaac 22505898  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  22505899 attgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 22505984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 25851192 - 25851373
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || |||||||| |||||  | |||||||   |||| |||||||| |||||||| ||||| ||| | |||||||||  ||||||    
T  25851192 cattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaac 25851291  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||| ||||||    
T  25851292 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcctatcatca 25851373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 20345402 - 20345583
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || ||||| || ||| |||   |||| |||||||| |||||||| ||||| ||| | |||||||||  ||||||    
T  20345402 cattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagcacttcctatcatctttaccacaaac 20345501  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  20345502 attactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatca 20345583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 14884239 - 14884058
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||| ||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| ||    
T  14884239 cattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaagcacttcctatcatctctcccacagac 14884140  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||    
T  14884139 attactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatca 14884058  T

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Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 211
Target Start/End: Original strand, 23669847 - 23669946
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||| |||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||| || ||||||||||||||||  |||||||    
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 16258189 - 16258103
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  16258189 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 16258103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 22591908 - 22591822
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22591822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 22595463 - 22595377
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatca 22595377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 21870432 - 21870341
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattca 21870341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 111 - 202
Target Start/End: Complemental strand, 21874712 - 21874621
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||||||| |||||| ||||||||||||||||| ||||||  ||||||| |||||||||||||||||| ||||||||| |||||||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattca 21874621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 17266553 - 17266399
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||  ||||| ||||||||||||||||| ||||| ||||||||||| |  |||||||| ||||| ||||| |||||||| |||||||    
T  17266553 cgcttgcaatcggctagcatgtgacccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacact 17266454  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  | || |  ||||||||||||||||| ||| |  | |||||||||||||||||    
T  17266453 taaaacacactatctcagcaggagcatccctcttactcggcctcctctcatcatt 17266399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 114 - 211
Target Start/End: Complemental strand, 21983328 - 21983231
Alignment:
Q  114 aacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||| |||||||| |||||||||||| | ||||||| ||||||||||||| ||||||| ||||| || ||||||||||||||||  |||||||    
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 21983231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 114 - 202
Target Start/End: Complemental strand, 21561176 - 21561088
Alignment:
Q  114 aacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||| ||||||| ||||| || ||||||||||||||||    
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattca 21561088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 43122685 - 43122781
Alignment:
Q  115 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    |||||||| ||||||||  |||| |||||||||||||||| |||||| ||| || ||||||||||||| || ||||||||||||||||  |||||||    
T  43122685 acattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaacatctctcctcttaggtctcctctcatcattcaatctttgct 43122781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 22465084 - 22465255
Alignment:
Q  31 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 130  Q
    ||||| || ||||| ||||| || ||||| || || || |||||||| || || || || ||||||||||||||||   | ||| ||||||| |||||||    
T  22465084 caaacgatatctccacgcttgcattcagccaacatatgacccttctgaccgcatctgaaacatttcttctcatcttggatgcaagcattactcttgtggc 22465183  T
Q  131 ctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | ||| ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||||||||||||||    
T  22465184 ccttcacaccacatttgtaacaaataacatcaacaggagcatttctccccttaggctgcctctcatcattca 22465255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 21631556 - 21631455
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctt 207  Q
    ||||||| |||||||  |||||||||||||||||||  ||||||||| || |||||||| || |||| || |  | ||||||||| ||||||||| ||||    
T  21631556 agtacaagcattactcgtgtggcctttctcaccacaagtgtagcaaacaacctcagcagtagtatctttctttctaggcctcctcacatcattcaccctt 21631457  T
Q  208 tg 209  Q
    ||    
T  21631456 tg 21631455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 26735882 - 26735793
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||| || ||||||||||||| |||  ||||||||| ||||||| ||||||||||| || |  | |||||||||||||||||    
T  26735882 acaagcattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcatt 26735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 23474426 - 23474526
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||  | | ||| || |  |||||||||||||||||||||  ||||||    
T  23474426 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacttctttctttctgggcctcctctcatcattcaatctttgc 23474525  T
Q  211 t 211  Q
    |    
T  23474526 t 23474526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 28892176 - 28892053
Alignment:
Q  31 caaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggc 130  Q
    ||||| |||||||||||||| || ||||| || |  || || ||||| || || || || |||||||||||||||| ||| ||| ||||||| |||||||    
T  28892176 caaacgatgtctccccgcttgcattcagccaacacatgacctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggc 28892077  T
Q  131 ctttctcaccacacttgtagcaaa 154  Q
    | ||| ||||||| ||||| ||||    
T  28892076 ccttcacaccacatttgtaacaaa 28892053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 18782346 - 18782408
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||| ||||| ||| | |||| |||||| |||||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatc 18782408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 20824647 - 20824728
Alignment:
Q  91 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcat 172  Q
    |||||||||||||||| ||| ||| ||||||| |||||||| ||| ||||||| ||||| |||| ||  ||| |||||||||    
T  20824647 catttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacatcaacaggagcat 20824728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 154
Target Start/End: Original strand, 20779086 - 20779170
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaa 154  Q
    |||||||| || || || || ||||||||||||||||  || ||| ||||||| |||||||| ||| ||||||| ||||| ||||    
T  20779086 cccttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaa 20779170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 92; Significance: 8e-45; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 16871 - 17058
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| |    
T  16871 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacaca 16970  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| |||||||||||||| ||||||||| | |||| |||||||| |||||||||||||||||| ||||||||||||||||||||    
T  16971 cattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcag 17058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 206
Target Start/End: Complemental strand, 1369 - 1191
Alignment:
Q  28 tagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgt 127  Q
    |||||||| || || || |||||||| ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||    
T  1369 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 1270  T
Q  128 ggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| |||||||||||| | ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1269 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcct 1191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 1869 - 1731
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||  || |||||    
T  1869 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagc 1770  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    || ||||||||||||||||||||| ||||||||||||||    
T  1769 agtagcatctctcctcttgggccttctctcatcattcag 1731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 211
Target Start/End: Complemental strand, 566 - 420
Alignment:
Q  65 tgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  |||||||     
T  566 tgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagt 467  T
Q  165 aggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||    
T  466 aggagcatctctcctcttgggtcttctctcatcattcagccgttgct 420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 206
Target Start/End: Original strand, 7990 - 8168
Alignment:
Q  28 tagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgt 127  Q
    |||||||| || || || |||||||| ||||||||  ||||||| ||||| |||||||| ||||| |||||||||||| ||  |||| ||||||| ||||    
T  7990 tagcaaacaatatccccacgcttacattcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgt 8089  T
Q  128 ggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| |||||||||||| | ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8090 ggcctttttcaccacacttgaaacaaattatctcagtaggagcatctctcctcttgggcctcctctcatcattcagcct 8168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 872 - 687
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||| ||||||||||| || ||||| || |||||||| ||||||||  |||||||||| || |||||||| ||||| ||| |||| ||||||  ||||||    
T  872 catttcagttatagcagacaatgtccccacgcttacattcagctaaactgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaac 773  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || |||||||||||||||||| ||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  772 attgctcttgtggcctttctcaccaaacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 1676 - 1495
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| |  ||||| || ||||| || ||||||||  ||||||||||||| |||||||| ||||| ||| |||||||||||  ||||||    
T  1676 cattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagcacttcctctcatctttaccacaaac 1577  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||| |||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  1576 attactcttgtgtcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 6042 - 6223
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    ||||||||||| ||||| ||||| || ||||| |||||||||| | ||||||| ||||| ||||| || ||||| |||||||||||| ||  ||| ||||    
T  6042 ttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtcctttctgaccacatctgaagcacttcttctcatctctatcacagacat 6141  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||||||| |||||||||||| |||||| ||| |||| | ||||||||||||||||||||||||||||||||||    
T  6142 tactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatt 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 514422 - 514237
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || | |||||| |||| |||  ||||||||||||| |||||||| ||||| ||| |||| ||||||  ||||||    
T  514422 cattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaagcacttcctctcgtctttaccacaaac 514323  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || |||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  514322 attgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattca 514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 206
Target Start/End: Original strand, 1984 - 2144
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||||||||  | ||||| |||||||||||||||||||| ||||||||||||     ||| |||||||| ||||||||||||||||||||||    
T  1984 cgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatctcggtcacacacattactcttgtggcctttctcaccacact 2083  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    || |||||| ||| |||| ||||||||||| |||||| |||||||||||||||||||||||    
T  2084 tgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcct 2144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 354 - 170
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| ||||| || |||||||||||||||| | ||||||  ||||| |||||| | ||||| |||||||||||| ||  ||| |    
T  354 tcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtcttttctgaccacacatgaagcacttcttctcatctctatcacaga 255  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    ||||||| |||||||||||||| ||||||||| |||||| ||| |||| |||||| ||||| |||||||||||||||||||||||    
T  254 cattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatt 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 54281 - 54476
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  || || ||||| |||| |||||   ||||||||||||| |||||||| || || ||||||||||||||||||||||    
T  54281 tcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtcccttctgaccacacctgaaacacttcttctcatctttagtacaaa 54380  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||| |||||||||||||| ||||||||||| ||||  ||||||||| |||||| ||  || |||||||||||||||||||||| ||| ||||    
T  54381 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgct 54476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 251856 - 252039
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| |||||||| |||||||| |||||||| ||||||| | ||||||| ||||| ||||||||||| |||||| |||||||| ||  |||| |||    
T  251856 ttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaaaacatttcctctcatctctaccacaagcat 251955  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
      |||||||||||||| |||||||||||| | || | ||||||| || ||||||||||||||||||||||||| ||||||||||    
T  251956 agcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcctcttgggcctcctatcatcattca 252039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Complemental strand, 229827 - 229765
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||| | |||| |||||| |||||||||||    
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatc 229765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 1557 - 1371
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||| |||||||| ||||| || | |||||| |||||||   ||||||||||||  ||||||||||| |||||| || ||||| ||  ||||     
T  1557 tcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtcccttctaaccacacctaaaacatttcctcacatctctaccacaag 1458  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || ||||||||||| |||||||||||||| || | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  1457 cattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattca 1371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 53493 - 53307
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| |||||||| || || | ||| || ||||| |||||| |||  |||||||| || || |||||||| || |||||||||||||| ||||||||||    
T  53493 tcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgtcctttttgaccacacctgaatcatttcttctcatccttagtacaaa 53394  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||||| ||||||||||| ||||  ||| ||||| ||||||||||||| ||||||||||||||||||||||    
T  53393 cattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagagcatctctcctattgggcctcctctcatcattca 53307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 87; Significance: 7e-42; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 64663 - 64485
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  64663 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 64564  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||| ||||||||||| ||||  ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  64563 tgtggcctttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 64485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 29858 - 30042
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||  |||| ||||| ||||| || | ||||||||||||||   |||||||||| || |||||||| ||||| |||||||||||| ||  |||||    
T  29858 tcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtcccttttgaccacacctgaagcacttcttctcatctctatcacaaa 29957  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    | ||||| |||||||||||||||||||||||| ||||||  || |||| |||| |||||||||||||||||||||||||||||||    
T  29958 cgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatt 30042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 49241 - 49063
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  49241 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 49142  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| ||||| ||||||||||| ||||  ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  49141 tgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 49063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 203
Target Start/End: Complemental strand, 58275 - 58097
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    |||||||||||||  || || ||||| |||| ||||| | ||||||| ||||| |||||||| || |||||||||||||| || |||||||||||||| |    
T  58275 ttatagcaaactacatcaccacgcttgcaattagctagtgtgtgtcctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactct 58176  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||| ||||| ||||||||||| ||||  ||||||||||||||||| ||||| || |||||||| |||||||||||    
T  58175 tgtggcccttctcgccacacttgtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcag 58097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 70342 - 70532
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| || || || ||||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||     ||| |    
T  70342 tcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatctcggtcacaca 70441  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| |||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  70442 cattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcct 70532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 164471 - 164285
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| |  |  || ||||| |||||| ||||  ||||||| ||||| |||||||| || || ||||||||||| |||| |||||    
T  164471 tcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgtcctttctgaccacacctgaaacacttcttctcatccttagaacaaa 164372  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||||||||||||| |||||||| ||||||||||||||||||||||    
T  164371 cattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattca 164285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 198
Target Start/End: Complemental strand, 43428 - 43341
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||| |||||| || ||||| || ||||||||| ||| ||||||    
T  43428 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatttcagcaagaccatctttcttcttgggccgcctatcatca 43341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 696 - 877
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| || |||||||| ||||||||  |||| |||||||| || ||||| ||||| ||| |||||||||||  ||||||    
T  696 cattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagcacttcctctcatctttaccacaaac 795  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||| || ||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  796 attgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatca 877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 40322 - 40487
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||| ||||| |||||||  |||||||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||| |||||||    
T  40322 cgcttgcaatccgctaacatgtgacccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacact 40421  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    | || || |  ||||||||||||||||||||||| || |||||||||||||||||||| |||||||    
T  40422 tataacagactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgct 40487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 50339 - 50524
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||| |||||||| || || || |||||||||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||    
T  50339 tcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaa 50438  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattc 201  Q
    ||||||| |||||| |||| |||||||||||| | |||| ||| |||| |||||||||||||||||||||||||||||||||||||    
T  50439 cattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattc 50524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 198
Target Start/End: Original strand, 41970 - 42151
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||||||    
T  41970 cattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaac 42069  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  42070 attactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 42151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 5704 - 5860
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||||||  |  ||| || ||||| ||||||||||||||||||||||    
T  5704 cgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctcatctcgatcacacacgttactcttgtggcctttctcaccacact 5803  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    || ||||||  ||||||| ||||||||||||||||||  ||||||||||||||||||    
T  5804 tgaagcaaattatctcagtaggagcatctctcctcttaagcctcctctcatcattca 5860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 11812 - 11631
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || ||||| |  ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| ||    
T  11812 cattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatac 11713  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    |||||| ||||||||||||| |||||||||||| || | ||||||| | || |||||||||||||||||| |||| ||||||    
T  11712 attactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggcttcctatcatca 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 924 - 764
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| || || || ||||| ||||||||||   ||||||| ||||| |||||||| ||||| ||||||||||||||||||||||    
T  924 tcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaa 825  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctct 176  Q
    ||||||| || ||||||||||  ||||||||||| |||| |||||||||||||||||||||    
T  824 cattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggagcatctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 11211 - 11397
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||||||||| ||||| || ||||| || |||||||| ||||||| |  |||||||||||| |||||||| ||||| ||| |||||||| ||  ||||     
T  11211 tcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtcccttctgaccacacctgaagcacttcctctcatctctaccacaag 11310  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||| || ||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||| || ||||| ||||||||||    
T  11311 cattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattca 11397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 206
Target Start/End: Complemental strand, 43480 - 43299
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    ||||||||||| |  || || |||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||  |  ||| |||||||| |    
T  43480 ttatagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactct 43381  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    ||||||| || |||| ||||||| | || | |||||||  |||||||||||||||||| |||||||||||||||||||||||    
T  43380 tgtggcccttttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcct 43299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 63558 - 63394
Alignment:
Q  47 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 146  Q
    ||||||||||||||||  ||||||| ||||| |||||||| || || ||||||||||||     |||||||||||| ||||||||||| |||||||||||    
T  63558 gcttacaatcagctaaagtgtgtcctttctgaccacacctgaaacacttcttctcatctcggtcacaaacattactcttgtggcctttatcaccacactt 63459  T
Q  147 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    | | |||| ||| |||| ||||||||||||||||||||||||||||||||||||||  |||||||    
T  63458 gaaacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgct 63394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 801 - 924
Alignment:
Q  79 ccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcc 178  Q
    |||||||| ||| | |||||||||||||||  ||| |||||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  801 ccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctctcc 900  T
Q  179 tcttgggcctcctctcatcattca 202  Q
    |||| |||||||||||||||||||    
T  901 tcttaggcctcctctcatcattca 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 6318 - 6132
Alignment:
Q  25 ttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttt 124  Q
    |||||||| || || || || ||||||||||||||||  | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||| ||||| |    
T  6318 ttatagcatacaatatcgccacgcttacaatcagctagcacgtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactct 6219  T
Q  125 tgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||||| ||||||||  | ||||  |||||  |||||||||||||||| || |||||||||||||||||||| |||||||    
T  6218 tgtggcctttctcgccacacttaaaacaaactatctcgacaggagcatctctcctattcggcctcctctcatcattcagtctttgct 6132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 16 - 202
Target Start/End: Original strand, 5415 - 5600
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    ||||| ||||| |||||||| |  || || |||||||||||||||||  ||||||| ||||| |||||||| ||||| ||||||||||||     |||||    
T  5415 tcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagcacttcttctcatctcggtcacaaa 5514  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||||||| |||||||||||| | |||| ||| |||| |||||||||||||||||| |||||||||||||||||||    
T  5515 cattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctctt-ggcctcctctcatcattca 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 62812 - 62656
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||||||||||||  ||||| | ||||| |||||||||||||| ||||||||||| |    ||| |||||||| ||||||||||||||||||||||    
T  62812 cgcttacaatcagctaaagtgtgtactttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacact 62713  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    || |  ||| ||| |||| |||||||||||||||||| |||||||||||||||||||    
T  62712 tgaattaaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattca 62656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 48 - 173
Target Start/End: Complemental strand, 65336 - 65211
Alignment:
Q  48 cttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttg 147  Q
    |||||||| ||| ||  ||||||| ||||| |||||||| ||||| || ||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  65336 cttacaattagccaacgtgtgtcctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttg 65237  T
Q  148 tagcaaagaatctcagcaggagcatc 173  Q
    || |||| || |||||||||||||||    
T  65236 taacaaacaacctcagcaggagcatc 65211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 206
Target Start/End: Original strand, 51916 - 52075
Alignment:
Q  47 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacactt 146  Q
    |||| |||| ||||||  ||||||| ||||  |||||||||||||| ||||||||||||  |  ||| |||||||| |||||||||||||||||||||||    
T  51916 gcttgcaataagctaaagtgtgtcctttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttctcaccacactt 52015  T
Q  147 gtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    | | || | |||||||| |||||||||||||||| | |||||||||||||||||||||||    
T  52016 gaaacagataatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcct 52075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 263496 - 263647
Alignment:
Q  52 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 151  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | |    
T  263496 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 263595  T
Q  152 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||  |||||||||||||||||||||||   |||||||||||||||||||||    
T  263596 aaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcag 263647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 23972 - 23811
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   ||| |||||||| |||||||||||||    
T  23972 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacattactcttgtggcctttct 23873  T
Q  137 caccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatca 198  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  23872 caccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatca 23811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 74; Significance: 4e-34; HSPs: 4)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 12482 - 12345
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| ||||| || |||||||||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  12482 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 12383  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaa 153  Q
    ||||||| |||||||||||||| ||||||||| |||||    
T  12382 cattactcttgtggcctttctcgccacacttgaagcaa 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 20662 - 20525
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaa 115  Q
    |||||||||||||| ||||| ||||| || |||||||||||| ||||| ||||||| |||||  ||||||||||||| |||||||||||||||  | |||    
T  20662 tcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaagcacttcttctcatctttacgaaaaa 20563  T
Q  116 cattacttttgtggcctttctcaccacacttgtagcaa 153  Q
    ||||||| |||||||||||||| ||||||||| |||||    
T  20562 cattactcttgtggcctttctcgccacacttgaagcaa 20525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 12330 - 12297
Alignment:
Q  170 catctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||||||||| ||||||||||||||    
T  12330 catctctcctcttgggcctactctcatcattcag 12297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 20510 - 20477
Alignment:
Q  170 catctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||||||||| ||||||||||||||    
T  20510 catctctcctcttgggcctactctcatcattcag 20477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 5212 - 5020
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| ||||| || |||||||| |||||||| |||||||   ||||||| ||||| |||||||| || |||||| |||||| | ||  |||| |||    
T  5212 ttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtcctttctgaccacacctgaaacatttcctctcatttctaccacaagcat 5113  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    |  ||||||||||||| ||| ||| ||| || |||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||| ||||    
T  5112 tgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgct 5020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 42962 - 43118
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||| |||| |||||  ||||||| ||||| | |||||||||||| ||||||||||||     |||||||||||| |||||||||||||||| |||||    
T  42962 cgcttaaaatccgctaaagtgtgtcctttctgactacacctaaagcacttcttctcatctcggtcacaaacattactcttgtggcctttctcacaacact 43061  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    || | ||||  ||||||| |||||||||||||||||| |||||||||||||||||||    
T  43062 tgaaacaaattatctcagtaggagcatctctcctcttaggcctcctctcatcattca 43118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 173
Target Start/End: Complemental strand, 50385 - 50258
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    |||||||| ||||||| | ||||||||||||  ||||| | ||| ||| ||||  | |||   | |||| |||| ||||||||||||||||||||||| |    
T  50385 cgcttacactcagctagtgtgtgtcccttcttcccacagcgaaaacatctctttccctctcccggacaagcattgcttttgtggcctttctcaccacaat 50286  T
Q  146 tgtagcaaagaatctcagcaggagcatc 173  Q
    |  |||| | ||||||||||||| ||||    
T  50285 taaagcagacaatctcagcaggaacatc 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 30393 - 30210
Alignment:
Q  19 ttgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacat 118  Q
    |||||||| ||||| || ||||| ||   |||||| ||||||| | ||||||| ||||  ||||||||||| |||||| ||| |||| ||  |||| |||    
T  30393 ttgcagttgtagcatacaatgtccccattcttacattcagctagtttgtgtcctttcttaccacacctaaaacatttcctcttatctctaccacaagcat 30294  T
Q  119 tacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    | || ||||||||||| ||||||||||| || |||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  30293 tgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcattca 30210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 575 - 428
Alignment:
Q  53 aatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagca 152  Q
    |||| |||||| ||||||| ||||| |||||||| ||||| |||||||||||| ||  ||||||| ||||||||||||||||||| ||||||||| | ||    
T  575 aatctgctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaaca 476  T
Q  153 aagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    || ||| ||   |||||||||||||||||||||||| |||||||||||    
T  475 aacaatatctataggagcatctctcctcttgggccttctctcatcatt 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 203651 - 203802
Alignment:
Q  52 caatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagc 151  Q
    ||||| ||||| | ||| |||||||| |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| ||||||||  | |    
T  203651 caatccgctaaaaggtgacccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaac 203750  T
Q  152 aaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||  |||||| ||||||||||||||||   |||||||||||||||||||||    
T  203751 aaactatctcaccaggagcatctctcctaacgggcctcctctcatcattcag 203802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 424637 - 424697
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagca 171  Q
    ||||||||| ||||||||||||||| ||||||| ||| |||| | |||||||| |||||||    
T  424637 acaaacattgcttttgtggcctttcacaccacagttgaagcacacaatctcagtaggagca 424697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 202
Target Start/End: Complemental strand, 1302 - 1188
Alignment:
Q  88 aagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcc 187  Q
    ||||| ||| |||||||| ||  ||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |    
T  1302 aagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggtc 1203  T
Q  188 tcctctcatcattca 202  Q
    |||| ||||||||||    
T  1202 tcctatcatcattca 1188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 200
Target Start/End: Complemental strand, 9827 - 9673
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| ||||| ||||| | ||| |||||||  |||||||| ||||| ||||||||||| || |||||||||||||| |||||||||||||| |||||||    
T  9827 cgcttgcaatccgctaaaaggtgacccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacact 9728  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |  | ||||  |||||||||||||||||||||||   ||||||||||||||||||    
T  9727 taaaacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcatt 9673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 202
Target Start/End: Complemental strand, 67177 - 66992
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| ||||| || ||||| ||  ||||||| |||||||   |||||||||| || |||||||| || |||||| |||||| | ||  ||||||    
T  67177 cattgcagttgtagcagacaatgtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaaacatttcctctcatgtctaccacaaac 67078  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||| || ||||||||||| ||||||||||| || |||| |||||| | ||||||||||||||||||||| ||||| ||||||||||    
T  67077 attgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatcattca 66992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 111 - 203
Target Start/End: Complemental strand, 5877 - 5785
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||||| ||||||||||| ||||||||||||||  ||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcag 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 204
Target Start/End: Original strand, 5866 - 6024
Alignment:
Q  46 cgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacact 145  Q
    ||||| |||||||||||| ||||||| ||||||||||| || || || ||||||| ||||  |  ||| |||||||| ||||||||||||||||||||||    
T  5866 cgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgtggcctttctcaccacact 5965  T
Q  146 tgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagc 204  Q
    || |  | | | |||||  ||| |||||||||||| | |||||||||||||||||||||    
T  5966 tgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagc 6024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 94 - 203
Target Start/End: Original strand, 115936 - 116045
Alignment:
Q  94 ttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctct 193  Q
    |||||||||||| ||  |||||||||||| ||||||||||| ||||||||| || | |||| ||| |||| ||||||||| |||||||| ||||||||||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctct 116035  T
Q  194 catcattcag 203  Q
    ||||||||||    
T  116036 catcattcag 116045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 31012 - 30897
Alignment:
Q  87 aaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggc 186  Q
    |||||| |||||||||||   | | ||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| |      
T  31012 aaagcacttcttctcatcaccattgcaagcattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagtt 30913  T
Q  187 ctcctctcatcattca 202  Q
    ||||||||||||||||    
T  30912 ctcctctcatcattca 30897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 3215 - 3285
Alignment:
Q  132 tttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattca 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 202
Target Start/End: Complemental strand, 33334 - 33256
Alignment:
Q  124 ttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| |||||||||||| | |||| ||| ||| |||||||||||||||||||||||||||||||||||||||    
T  33334 ttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattca 33256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 12052 - 12176
Alignment:
Q  37 atgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttct 136  Q
    ||||| || ||||| || ||||||||  |||| |||||||| |||||||| ||||| ||| | |||||| |   |||||||||||| |||||||||||||    
T  12052 atgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacattactcttgtggcctttct 12151  T
Q  137 caccacacttgtagcaaagaatctc 161  Q
    |||||||||||||||||| ||||||    
T  12152 caccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 16584 - 16484
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| |||||||| |||||||||||||||||||||| || ||||||||||| |||| || |  | ||||||||||||||||||| |||||||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 16485  T
Q  211 t 211  Q
    |    
T  16484 t 16484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 1269 - 1359
Alignment:
Q  112 caaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||| |||||||| ||||||||||||||||| |||| |||||||| |||| |||| || ||||| || ||||||||||||||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattca 1359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Original strand, 7908 - 7977
Alignment:
Q  133 ttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||||||||||||| |||| |||||||| |||| |||| || ||||| || ||||||||||||||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattca 7977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 36156 - 36245
Alignment:
Q  110 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcat 199  Q
    |||| |||||||| ||||||||||||||||||||| ||||||||| ||||| || ||| |||||||| ||||| || |||||||||||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 30169 - 30325
Alignment:
Q  17 cattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaac 116  Q
    |||||||||| || || || ||||| || |||||||| |||||||   ||||||  ||||| |||||||| || || ||| |||||||| ||  ||||||    
T  30169 cattgcagttgtaacagacaatgtccccacgcttacattcagctaggttgtgtcttttctgaccacacctgaatcacttcctctcatctctaccacaaac 30268  T
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
     || ||||||||||||||||||||||||||||| |||| ||||| || | |||||||    
T  30269 gttgcttttgtggcctttctcaccacacttgtaacaaacaatcttagaaagagcatc 30325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 3863 - 3776
Alignment:
Q  115 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    |||||||| ||||||||  |||| |||||||||||||||| ||||||| ||| | ||||||||||||| || ||||||||||||||||    
T  3863 acattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattca 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 29855 - 29948
Alignment:
Q  110 tacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    ||||||||||||| |||||||| || |||||||||||| |  | |  ||||||  |||||||||||||||| | ||||||||||||||||||||    
T  29855 tacaaacattactcttgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcag 29948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 18174 - 18263
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||| ||||||| || |  | |||||||||||||||||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcatt 18263  T

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Target: scaffold0040; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 110882 - 110819
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  110882 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 110819  T

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Target: scaffold0270 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 7202 - 7302
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||| ||||||||||| || |  | |||||||||||||||||||  ||||||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 7301  T
Q  211 t 211  Q
    |    
T  7302 t 7302  T

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Target: scaffold0270; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 211
Target Start/End: Original strand, 14332 - 14432
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || |||||||||||||||||  | ||||||| ||||||| ||||||||||| || |  | |||||||||||||||||||  ||||||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 14431  T
Q  211 t 211  Q
    |    
T  14432 t 14432  T

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Target: scaffold0529 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 5414 - 5517
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctt 207  Q
    ||||||| ||||||| |||||||||||| |||||||   |||||||| || |||||||| || |||| || |  | ||||||||||||||||||| ||||    
T  5414 agtacaagcattactcttgtggcctttcacaccacaagggtagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcaccctt 5513  T
Q  208 tgct 211  Q
    ||||    
T  5514 tgct 5517  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 26678 - 26781
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctt 207  Q
    ||||||| ||||||| ||||||||||||||||||||  | ||||||| || |||||||| || |||| || |  | |||||||||||||||||||  |||    
T  26678 agtacaagcattactcttgtggcctttctcaccacaagtatagcaaacaacctcagcagtagtatctttctttctaggcctcctctcatcattcactctt 26777  T
Q  208 tgct 211  Q
    ||||    
T  26778 tgct 26781  T

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Target: scaffold1914 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 70 - 200
Target Start/End: Complemental strand, 1246 - 1116
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    |||||||||||||| || || || ||||||||||| || |||||||| ||||| ||||| |||||||| ||||||||  |||| |  |||||||||| ||    
T  1246 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaag 1147  T
Q  170 catctctcctcttgggcctcctctcatcatt 200  Q
    || |  || |  | |||||||||||||||||    
T  1146 cacccttcttactcggcctcctctcatcatt 1116  T

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Target: scaffold0518 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 2206 - 2260
Alignment:
Q  157 atctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||||||||||||||||||||| ||  |||||||||||||||||| ||||||||    
T  2206 atctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgct 2260  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 139585 - 139499
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 197  Q
    |||||||||||| |||||||||||||||||||| ||| |||||  ||||||||| |||| ||| ||| |||| |||| ||| |||||    
T  139585 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcagctggagtatccctcttcttaggccgcctatcatc 139499  T

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Target: scaffold0008; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 182
Target Start/End: Original strand, 179 - 250
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctctt 182  Q
    |||||||||||| |||||||||||||||||||| ||| |||||  ||||||| | |||||||| ||| ||||    
T  179 acaaacattactcttgtggcctttctcaccacaattgaagcaagtaatctcaactggagcatccctcttctt 250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 12961 - 13046
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctc 101  Q
    ||||| ||||| |||||||| |  || || |||||||||||||||||  ||||||| ||||| |||||||||||||| ||||||||    
T  12961 tcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctaaagcacttcttctc 13046  T

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Target: scaffold0865 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 1243 - 1155
Alignment:
Q  115 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||  ||||||||||| |||||||| ||  | || | ||||| || |||||||||||||||| | ||||||||||||||||||||    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 1155  T

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Target: scaffold0509 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcagga 168  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||| ||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 203
Target Start/End: Complemental strand, 28256 - 28168
Alignment:
Q  115 acattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||  ||||||||||| |||||||| ||  | || | ||||| || |||||||||||||||| | ||||||||||||||||||||    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcag 28168  T

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Target: scaffold0605 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 202
Target Start/End: Original strand, 1589 - 1700
Alignment:
Q  91 catttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcc 190  Q
    ||||||||||||||||  || ||| ||||||| |||||||| ||  ||||||| ||||| |||| ||  ||| ||||||||| ||||| ||| |||  ||    
T  1589 catttcttctcatcttgggtgcaagcattactcttgtggcccttaacaccacatttgtaacaaacaacatcaacaggagcatttctccccttaggctgcc 1688  T
Q  191 tctcatcattca 202  Q
    ||||||||||||    
T  1689 tctcatcattca 1700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2059 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 744 - 658
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatc 197  Q
    |||||||||||| |||||| ||||||||||||| ||| | |||  ||||||||| |||||||| ||| |||| |||| ||| |||||    
T  744 acaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggccgcctatcatc 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 12322 - 12368
Alignment:
Q  160 tcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcct 12368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 12194 - 12283
Alignment:
Q  16 tcattgcagttatagcaaactatgtctccccgcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatct 105  Q
    ||||| ||||| |||||||| || || || | ||| |||||||| ||| ||||||| ||||||||||| || || || ||||||||||||    
T  12194 tcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcctttctgtccacatctgaaacacttcttctcatct 12283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 17489 - 17551
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatc 17551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 171447 - 171509
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    |||||||||||| |||||||||||||||||||| ||||| |||  ||||||| | ||||||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaagtaatctcaactggagcatc 171509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 9329 - 9235
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||||| ||||||| |||||||| |||||||||||  | ||||||| |||||||| || || |||| || |  | |||||||||||||||||||    
T  9329 agtacaagcattactcttgtggcccttctcaccacaagtatagcaaacaatctcagtagtagtatctttctttctaggcctcctctcatcattca 9235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 15739 - 15828
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcatt 200  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||  | ||||| || |  |||||| ||||||||||||    
T  15739 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcaacaacatctttcttgctgggccgcctctcatcatt 15828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 104561 - 104618
Alignment:
Q  117 attacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    |||||| ||||||||||||||||||||  | ||||||| ||||||| |||||||||||    
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatct 104618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 1 - 97
Alignment:
Q  47 gcttacaatcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccaca 143  Q
    |||| |||||||||||  | || |||||||  |||||||  || ||||||||| | || || | ||||||||| |||||||||||||||||||||||    
T  1 gcttgcaatcagctaaagtatgacccttcttgccacaccggaaacatttcttcacctcctttggacaaacattgcttttgtggcctttctcaccaca 97  T

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Target: scaffold0282 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 13449 - 13349
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| |||||||| |  | ||||| || |  | |||||||||||||||||||  ||||||    
T  13449 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagtaacaacatctttctttctaggcctcctctcatcattcaatctttgc 13350  T
Q  211 t 211  Q
    |    
T  13349 t 13349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 211
Target Start/End: Original strand, 2324 - 2428
Alignment:
Q  107 tagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcct 206  Q
    |||||||| | ||||| ||||| |||||||| |||||   | | |||||||||||||||||   |||| || ||||||| |||||||||||||||| |||    
T  2324 tagtacaagcgttactcttgtgacctttctctccacataggaaacaaagaatctcagcaggtatatctttcttcttgggtctcctctcatcattcaccct 2423  T
Q  207 ttgct 211  Q
     ||||    
T  2424 ctgct 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 211
Target Start/End: Complemental strand, 57589 - 57489
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgc 210  Q
    |||| ||||||| || ||||||||||| |||||  | ||| ||| ||||||| ||||||||||| || |  | |||||||||||||||||||  ||||||    
T  57589 acaagcattactcttatggcctttctcgccacaagtatagtaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 57490  T
Q  211 t 211  Q
    |    
T  57489 t 57489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 48059 - 48122
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  48059 acaagcattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 48122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 55441 - 55383
Alignment:
Q  116 cattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatct 174  Q
    ||||||| ||||||||||||||||||||  | ||||| | ||||||| |||||||||||    
T  55441 cattactcttgtggcctttctcaccacaagtatagcagacaatctcaacaggagcatct 55383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 117 - 179
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatc 173  Q
    ||||||||| || |||||||||||||||||||| ||| | || | |||||| |||||||||||    
T  117 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatc 179  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 216395 - 216341
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagca 165  Q
    |||| ||||||| || |||||||||||||||||  ||||||||| ||||||||||    
T  216395 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagca 216341  T

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Target: scaffold0848 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 4967 - 4874
Alignment:
Q  118 ttacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctttgct 211  Q
    ||||| ||||| || |||||||||||| |||| ||||  || ||||||||||  |||  | |||||||||||||||| ||||||| ||| ||||    
T  4967 ttactcttgtgacccttctcaccacacctgtaacaaactatttcagcaggagtctcttccttcttgggcctcctctcgtcattcaacctatgct 4874  T

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Target: scaffold0621 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 305 - 433
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    |||||||  ||||| | ||| ||| ||||| |||||  || |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||  || |||    
T  305 cccttcttaccacagcgaaaccatctcttcacatctccaggacaagcattactcttgtggcctttctcaccacaagtatagcagacaatctccacaagag 404  T
Q  170 catctctcctcttgggcctcctctcatca 198  Q
    ||||| || |||| |||| ||| ||||||    
T  405 catctttcttcttaggccacctatcatca 433  T

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Target: scaffold0621; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 198
Target Start/End: Original strand, 4722 - 4850
Alignment:
Q  70 cccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggag 169  Q
    |||||||  ||||| | ||| ||| ||||| |||||  || |||| ||||||| ||||||||||||||||||||  | ||||| | ||||||  || |||    
T  4722 cccttcttaccacagcgaaaccatctcttcacatctccaggacaagcattactcttgtggcctttctcaccacaagtatagcagacaatctccacaagag 4821  T
Q  170 catctctcctcttgggcctcctctcatca 198  Q
    ||||| || |||| |||| ||| ||||||    
T  4822 catctttcttcttaggccacctatcatca 4850  T

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Target: scaffold0585 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 775 - 743
Alignment:
Q  171 atctctcctcttgggcctcctctcatcattcag 203  Q
    |||||||||||| ||||||||||||||||||||    
T  775 atctctcctcttaggcctcctctcatcattcag 743  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 3871 - 3903
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccaca 143  Q
    |||| ||||||||||||||||||||||||||||    
T  3871 acaagcattacttttgtggcctttctcaccaca 3903  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 17952 - 17920
Alignment:
Q  111 acaaacattacttttgtggcctttctcaccaca 143  Q
    |||||||||||| ||||||||||||||||||||    
T  17952 acaaacattactcttgtggcctttctcaccaca 17920  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 14957 - 14901
Alignment:
Q  108 agtacaaacattacttttgtggcctttctcaccacacttgtagcaaagaatctcagc 164  Q
    ||||||| ||||||| || |||||||||||||||||  | |||||||||| ||||||    
T  14957 agtacaagcattactcttatggcctttctcaccacaagtatagcaaagaacctcagc 14901  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 28959 - 28871
Alignment:
Q  55 tcagctaatatgtgtcccttctgtccacacctaaagcatttcttctcatctttagtacaaacattacttttgtggcctttctcaccaca 143  Q
    ||||||||| |||| |||||||  |||||||  || ||||||||  | || |||| ||||||||| || |||||||||||||| |||||    
T  28959 tcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctccttaggacaaacattgctcttgtggcctttctcgccaca 28871  T

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Target: scaffold0098 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 202
Target Start/End: Original strand, 25808 - 25892
Alignment:
Q  118 ttacttttgtggcctttctcaccacacttgtagcaaagaatctcagcaggagcatctctcctcttgggcctcctctcatcattca 202  Q
    ||||| ||||| |||||||||||||| ||||| ||||  || ||| ||||||  |||  |||||||||| ||||||| |||||||    
T  25808 ttactcttgtgacctttctcaccacatttgtaacaaactatttcaacaggagtctcttccctcttgggcatcctctcgtcattca 25892  T

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