View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21137_low_9 (Length: 291)
Name: NF21137_low_9
Description: NF21137
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21137_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 45190886 - 45191149
Alignment:
| Q |
18 |
atgttcatcactctccaagagggacaggaaggttctttcatttcatcgaattgcaacgagctacagataattttgatgaaaagagagtgattggttatgg |
117 |
Q |
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| T |
45190886 |
atgttcatcactctccaagagggacaggaaggttctttcatttcatcgaattgcaacgagctacagataattttgatgaaaagagagtgattggttatgg |
45190985 |
T |
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| Q |
118 |
aggatttggtaaagtgtaccttgggacattggatgatggaacaaatgttgctgtaaaaagaggaggtggtggttctgagcaaggaataaatgagttcaga |
217 |
Q |
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| T |
45190986 |
aggatttggtaaagtgtaccttgggacattggatgatggaacaaatgttgctgtaaaaagaggaggtggtggttctgagcaaggaataaatgagttcaga |
45191085 |
T |
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| Q |
218 |
accgaactaaacatgctttctaagctgcgacatcgccacctagtttcactaataggtttctgtg |
281 |
Q |
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| T |
45191086 |
accgaactaaagatgctttctaagctgcgacatcgccacctagtttcactaataggtttctgtg |
45191149 |
T |
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