View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21139_low_1 (Length: 455)

Name: NF21139_low_1
Description: NF21139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21139_low_1
NF21139_low_1
[»] chr5 (15 HSPs)
chr5 (93-439)||(32463613-32463959)
chr5 (198-437)||(32457178-32457417)
chr5 (6-89)||(18033982-18034065)
chr5 (6-89)||(22512305-22512388)
chr5 (6-89)||(7617133-7617216)
chr5 (6-89)||(2614666-2614749)
chr5 (6-89)||(33801469-33801552)
chr5 (14-89)||(33855068-33855143)
chr5 (6-89)||(41334680-41334763)
chr5 (7-87)||(25915006-25915085)
chr5 (6-89)||(38470579-38470662)
chr5 (6-87)||(5256997-5257078)
chr5 (6-89)||(32473411-32473494)
chr5 (6-89)||(17208074-17208157)
chr5 (38-90)||(15409527-15409579)
[»] scaffold0161 (1 HSPs)
scaffold0161 (195-437)||(23139-23381)
[»] chr4 (37 HSPs)
chr4 (6-89)||(1771283-1771366)
chr4 (9-89)||(12496956-12497036)
chr4 (9-90)||(27550308-27550389)
chr4 (6-87)||(43514703-43514784)
chr4 (6-89)||(25051693-25051776)
chr4 (6-89)||(27864564-27864647)
chr4 (6-89)||(28982839-28982922)
chr4 (6-89)||(33703141-33703224)
chr4 (6-89)||(55966363-55966446)
chr4 (6-89)||(23035980-23036063)
chr4 (6-89)||(35017733-35017815)
chr4 (6-89)||(48463467-48463550)
chr4 (7-89)||(27316731-27316813)
chr4 (6-87)||(43949818-43949900)
chr4 (6-87)||(27893859-27893940)
chr4 (6-86)||(23204795-23204875)
chr4 (6-89)||(55272393-55272476)
chr4 (6-87)||(39631102-39631184)
chr4 (6-87)||(31680904-31680985)
chr4 (6-89)||(711960-712043)
chr4 (6-89)||(17619169-17619252)
chr4 (7-89)||(21687006-21687088)
chr4 (7-89)||(28988473-28988555)
chr4 (6-88)||(41878407-41878489)
chr4 (6-87)||(3756263-3756344)
chr4 (6-87)||(35037007-35037088)
chr4 (6-87)||(43735744-43735825)
chr4 (9-89)||(960890-960970)
chr4 (6-89)||(32728357-32728440)
chr4 (32-89)||(46827749-46827806)
chr4 (38-89)||(30189273-30189324)
chr4 (6-89)||(45490330-45490413)
chr4 (9-47)||(51512285-51512323)
chr4 (37-94)||(50526084-50526141)
chr4 (22-89)||(41847971-41848038)
chr4 (6-89)||(48435596-48435679)
chr4 (31-85)||(54473455-54473509)
[»] chr3 (24 HSPs)
chr3 (6-89)||(54246165-54246248)
chr3 (6-89)||(24688419-24688502)
chr3 (6-89)||(42100688-42100771)
chr3 (6-88)||(42394436-42394518)
chr3 (6-89)||(25413681-25413764)
chr3 (6-89)||(40808865-40808948)
chr3 (6-89)||(46941053-46941136)
chr3 (6-88)||(54237097-54237179)
chr3 (6-89)||(45126945-45127028)
chr3 (6-89)||(47191043-47191125)
chr3 (6-87)||(53581875-53581956)
chr3 (6-89)||(4190282-4190365)
chr3 (6-89)||(9434124-9434207)
chr3 (6-89)||(36150130-36150213)
chr3 (6-88)||(40480750-40480832)
chr3 (6-89)||(53273701-53273784)
chr3 (6-87)||(1078229-1078309)
chr3 (6-87)||(27748565-27748646)
chr3 (6-89)||(10457909-10457992)
chr3 (6-89)||(25996268-25996351)
chr3 (6-85)||(29558251-29558330)
chr3 (6-89)||(34791829-34791912)
chr3 (6-89)||(51757593-51757676)
chr3 (6-89)||(52627994-52628077)
[»] scaffold0157 (1 HSPs)
scaffold0157 (9-89)||(23441-23521)
[»] chr6 (18 HSPs)
chr6 (6-89)||(7273352-7273435)
chr6 (6-89)||(9698350-9698433)
chr6 (6-89)||(26670026-26670109)
chr6 (6-89)||(26466799-26466882)
chr6 (6-87)||(24204004-24204085)
chr6 (6-87)||(30735984-30736065)
chr6 (6-89)||(13743238-13743321)
chr6 (6-89)||(13748738-13748821)
chr6 (6-89)||(21279929-21280012)
chr6 (6-89)||(30014343-30014426)
chr6 (6-89)||(7292747-7292830)
chr6 (6-89)||(7367549-7367632)
chr6 (6-89)||(3213400-3213483)
chr6 (6-89)||(21293694-21293777)
chr6 (6-87)||(27441544-27441625)
chr6 (6-89)||(33242403-33242486)
chr6 (22-89)||(31109255-31109322)
chr6 (6-89)||(33253913-33253996)
[»] chr2 (30 HSPs)
chr2 (6-89)||(1750414-1750497)
chr2 (6-88)||(19047158-19047240)
chr2 (6-89)||(12302270-12302353)
chr2 (6-89)||(16096747-16096830)
chr2 (7-87)||(43490419-43490499)
chr2 (6-89)||(30838632-30838715)
chr2 (6-89)||(4764743-4764826)
chr2 (6-89)||(43335780-43335863)
chr2 (10-87)||(33229303-33229381)
chr2 (6-89)||(43114557-43114640)
chr2 (6-87)||(11825671-11825752)
chr2 (6-87)||(6518486-6518566)
chr2 (6-87)||(41281991-41282072)
chr2 (6-89)||(12415477-12415560)
chr2 (6-89)||(12427537-12427620)
chr2 (6-89)||(16803968-16804051)
chr2 (6-89)||(16843250-16843333)
chr2 (32-89)||(966877-966934)
chr2 (6-87)||(8896600-8896681)
chr2 (6-89)||(18491705-18491788)
chr2 (37-88)||(34817824-34817875)
chr2 (50-89)||(42849907-42849946)
chr2 (7-89)||(14285676-14285758)
chr2 (6-89)||(42026767-42026852)
chr2 (6-87)||(4299437-4299518)
chr2 (6-89)||(13780752-13780835)
chr2 (6-89)||(34895758-34895841)
chr2 (46-87)||(7070418-7070459)
chr2 (10-51)||(39149313-39149354)
chr2 (37-89)||(20700945-20700997)
[»] chr1 (26 HSPs)
chr1 (6-89)||(43571103-43571186)
chr1 (6-89)||(5489776-5489859)
chr1 (6-89)||(48498979-48499062)
chr1 (6-87)||(4401329-4401411)
chr1 (13-89)||(24769523-24769599)
chr1 (9-89)||(50448280-50448360)
chr1 (6-87)||(2497579-2497660)
chr1 (6-87)||(7447828-7447908)
chr1 (6-89)||(44112677-44112760)
chr1 (6-89)||(48119628-48119711)
chr1 (7-89)||(750323-750405)
chr1 (6-89)||(23989540-23989624)
chr1 (6-90)||(37814777-37814861)
chr1 (6-89)||(35003294-35003377)
chr1 (6-89)||(38113212-38113295)
chr1 (6-89)||(38335918-38336001)
chr1 (6-89)||(41065153-41065236)
chr1 (6-90)||(46168382-46168466)
chr1 (6-89)||(45427762-45427845)
chr1 (6-89)||(45639749-45639832)
chr1 (32-89)||(14427347-14427404)
chr1 (8-89)||(26585462-26585543)
chr1 (37-89)||(51898601-51898653)
chr1 (22-89)||(35000146-35000213)
chr1 (6-89)||(45705825-45705908)
chr1 (56-89)||(4888055-4888088)
[»] scaffold0038 (1 HSPs)
scaffold0038 (6-88)||(112656-112738)
[»] chr7 (31 HSPs)
chr7 (6-91)||(42972850-42972935)
chr7 (6-89)||(5015395-5015478)
chr7 (6-89)||(24001029-24001112)
chr7 (6-89)||(42538448-42538531)
chr7 (6-89)||(35069721-35069804)
chr7 (6-89)||(5810941-5811024)
chr7 (6-87)||(4638216-4638297)
chr7 (6-89)||(9216302-9216384)
chr7 (6-87)||(43343641-43343722)
chr7 (6-87)||(44326180-44326261)
chr7 (6-87)||(44416951-44417032)
chr7 (6-89)||(27535248-27535331)
chr7 (6-89)||(41861674-41861759)
chr7 (6-87)||(10573751-10573832)
chr7 (6-87)||(16180374-16180454)
chr7 (9-86)||(26898422-26898499)
chr7 (6-66)||(38160596-38160656)
chr7 (9-80)||(32029837-32029908)
chr7 (6-89)||(40236919-40237002)
chr7 (6-89)||(45326020-45326103)
chr7 (6-88)||(31408650-31408732)
chr7 (6-91)||(27393277-27393361)
chr7 (6-89)||(5194248-5194331)
chr7 (6-89)||(24280613-24280696)
chr7 (6-89)||(31513287-31513370)
chr7 (21-89)||(39998408-39998476)
chr7 (6-89)||(43317443-43317526)
chr7 (56-89)||(38160661-38160694)
chr7 (36-89)||(47279744-47279797)
chr7 (6-89)||(33384870-33384954)
chr7 (37-89)||(41423812-41423864)
[»] chr8 (24 HSPs)
chr8 (7-91)||(2165981-2166065)
chr8 (6-89)||(2546996-2547079)
chr8 (6-89)||(11582766-11582849)
chr8 (6-89)||(29705362-29705445)
chr8 (6-89)||(36743500-36743583)
chr8 (6-87)||(42295197-42295278)
chr8 (6-88)||(45397317-45397399)
chr8 (6-87)||(26125637-26125718)
chr8 (6-87)||(30912579-30912660)
chr8 (6-87)||(42699259-42699340)
chr8 (9-89)||(30660762-30660842)
chr8 (6-89)||(5754903-5754986)
chr8 (6-89)||(42197452-42197535)
chr8 (6-87)||(29800967-29801048)
chr8 (6-89)||(18066735-18066818)
chr8 (6-81)||(31384672-31384747)
chr8 (6-87)||(20148762-20148843)
chr8 (6-89)||(35181516-35181599)
chr8 (6-89)||(1375542-1375625)
chr8 (6-89)||(34304788-34304871)
chr8 (6-87)||(33630010-33630091)
chr8 (6-89)||(16603643-16603726)
chr8 (55-89)||(28977146-28977180)
chr8 (37-89)||(37038609-37038661)
[»] scaffold0119 (1 HSPs)
scaffold0119 (6-89)||(685-768)
[»] scaffold0187 (2 HSPs)
scaffold0187 (6-89)||(14205-14288)
scaffold0187 (6-89)||(24533-24616)
[»] scaffold0385 (1 HSPs)
scaffold0385 (6-89)||(11251-11334)
[»] scaffold0003 (1 HSPs)
scaffold0003 (6-87)||(45736-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (6-89)||(35473-35556)


Alignment Details
Target: chr5 (Bit Score: 319; Significance: 1e-180; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 93 - 439
Target Start/End: Original strand, 32463613 - 32463959
Alignment:
Q  93 gagtatctaccactaatgttacttcaggttggttacactcattactatttaaatgtgacgactcagtgcagtgcagagtgtactaaccagaacaaaaaac 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32463613 gagtatctaccactaatgttacttcaggttggttacactcattactatttaaatgtgacgactcaatgcagtgcagagtgtactaaccagaacaaaaaac 32463712  T
Q  193 cattcatatacaatggaccagttaaccagaaaccaagcaaattcaacatctctaaccccactcaccttcttagacagagcagccactgtctatggcaact 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  32463713 cattcatatacaatggaccagttaaccagaaaccaagcaaattcaacagctctaaccccactcaccttcttagaaagagcagccactgtctatggcaact 32463812  T
Q  293 ccatttccatcatatacaacaacacttcattcacttggtctcaaacccacaaaagatgtcttcaacttgcttcatcactttcttccctcggcatccaaaa 392  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32463813 ccatttcaatcatatacaacaatacctcattcacttggtctcaaacccacaaaagatgtcttcaacttgcttcatcactttcttccctcggcatccaaaa 32463912  T
Q  393 aggcgatgtcgtctccgtcctttcccccaacactccggccatgtatg 439  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32463913 aggcgacgtcgtctccgtcctttcccccaacactccggccatgtatg 32463959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 198 - 437
Target Start/End: Complemental strand, 32457417 - 32457178
Alignment:
Q  198 atatacaatggaccagttaaccagaaaccaagcaaattcaacatctctaaccccactcaccttcttagacagagcagccactgtctatggcaactccatt 297  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32457417 atatacaatgaaccagttaaccagaaaccaagcaaattcaacggctctaaccccactcaccttcttagaaagagcagccactgtctatggcaactccatt 32457318  T
Q  298 tccatcatatacaacaacacttcattcacttggtctcaaacccacaaaagatgtcttcaacttgcttcatcactttcttccctcggcatccaaaaaggcg 397  Q
    || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32457317 tcaatcatatacaacaatacctcattcacttggtctcaaacccacaaaagatgtcttcaacttgcttcatcactttcttccctcggcatccaaaaaggcg 32457218  T
Q  398 atgtcgtctccgtcctttcccccaacactccggccatgta 437  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  32457217 atgtcgtctccgtcctttcccccaacactccggccatgta 32457178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 18034065 - 18033982
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 22512388 - 22512305
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 22512305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 7617216 - 7617133
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttcc 7617133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 2614666 - 2614749
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 2614749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 33801552 - 33801469
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttcc 33801469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 33855068 - 33855143
Alignment:
Q  14 aacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| ||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 41334680 - 41334763
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| ||||  ||||| |||||||||||||||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttcc 41334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 25915006 - 25915085
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| ||| ||||||| |||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||    
T  25915006 tgagatgaacctacaaaaatat-tctaatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 38470662 - 38470579
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||||| |||| ||||||||  ||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttcc 38470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 32473411 - 32473494
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| |||||||| ||||| |||| ||||||||||   ||||| || ||||||||||||||||||||||||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 32473494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 17208157 - 17208074
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  |||| |||||||||||||||  |||||| || ||||||||||||| ||||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttcc 17208074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 90
Target Start/End: Complemental strand, 15409579 - 15409527
Alignment:
Q  38 atggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccc 90  Q
    ||||||||||||| || || |  |||||||||||||| |||||||||||||||    
T  15409579 atggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacattttccc 15409527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 195 - 437
Target Start/End: Original strand, 23139 - 23381
Alignment:
Q  195 ttcatatacaatggaccagttaaccagaaaccaagcaaattcaacatctctaaccccactcaccttcttagacagagcagccactgtctatggcaactcc 294  Q
    ||||||||||||| ||||| ||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23139 ttcatatacaatgaaccagataaccagaaaccaagcaaactcgacacctctaaccccactcaccttcttagacagagcagctactgtctatggcaactcc 23238  T
Q  295 atttccatcatatacaacaacacttcattcacttggtctcaaacccacaaaagatgtcttcaacttgcttcatcactttcttccctcggcatccaaaaag 394  Q
    || || ||||||||||||| |||||||||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||    
T  23239 atatcaatcatatacaacagcacttcattcacatggtttcaaacccataaacgatgtcttcaacttgcttcatcactttcttccctcggcatcgtaaaag 23338  T
Q  395 gcgatgtcgtctccgtcctttcccccaacactccggccatgta 437  Q
    |||| |||||||||||||| || ||||||||||||||||||||    
T  23339 gcgacgtcgtctccgtcctctctcccaacactccggccatgta 23381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 1771283 - 1771366
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 12497036 - 12496956
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 12496956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 27550389 - 27550308
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccc 90  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttccc 27550308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||| | ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 25051776 - 25051693
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttcc 25051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 27864647 - 27864564
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||  |||| ||||||| |||||| ||||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttcc 27864564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 28982839 - 28982922
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||| ||||| |||||||| | |||||| ||||||||||||||||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttcc 28982922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 33703224 - 33703141
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 33703141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 55966363 - 55966446
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||||  |||| |||||||||||||| ||||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 55966446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 23036063 - 23035980
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||| || ||||||||||| | |||||||||||||||  ||||||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttcc 23035980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 35017815 - 35017733
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||   | ||||||||||||||||||||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttcc 35017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 48463467 - 48463550
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||| ||||||||| | |||| ||||||| |||||| ||||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttcc 48463550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 27316731 - 27316813
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||||  |||||||||||||||| ||||  ||||||||||||||||||||| | |||||||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttcc 27316813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 43949818 - 43949900
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||  ||| |||||| |||||||||||||||| ||||||    
T  43949818 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 27893859 - 27893940
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 23204795 - 23204875
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattt 86  Q
    |||| |||||||||| |||||||| ||||||||| || ||||||||||  ||||||||||||| |||||||||||||||||    
T  23204795 gtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 55272393 - 55272476
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| ||||||||||||||| ||||||| || |||||| |||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatgattaaaggatgttcatgtaacattttcc 55272476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 39631184 - 39631102
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||  |||||||||| |||||| ||||||||| ||||||    
T  39631184 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 31680985 - 31680904
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||| | ||||||||||||||| |||| ||||||| |||||| | ||||||||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 712043 - 711960
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| ||| ||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 17619169 - 17619252
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| ||||||||||||||| | ||||| || |||| |||||||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 17619252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 21687088 - 21687006
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| ||||||| ||||||||||  | |||| ||||| |||||  |||||||| |||||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttcc 21687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 28988555 - 28988473
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||  ||||| || ||| | ||||||||||||||||  ||||| |||||||||||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttcc 28988473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||  |||||||| |||||  || ||||||||||||  ||||| |||||||| |||||||||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 3756263 - 3756344
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||| || |||| ||||||||  |||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 35037088 - 35037007
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||||||  |||| ||||||||||||||| ||||||| |  ||||||||| ||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagagtgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 43735825 - 43735744
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||  ||||||||||||||||||||  |||| ||||   |||||||||||||| ||||||||||| |||||    
T  43735825 gtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 960890 - 960970
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| |||| ||||| || |||||  || ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 960970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 32728440 - 32728357
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  |||| ||||||||||||||| | ||||| || |||||| |||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 32728357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 46827749 - 46827806
Alignment:
Q  32 taatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||| ||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  46827749 taatgcattgggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 46827806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 30189324 - 30189273
Alignment:
Q  38 atggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||| |||||||||  ||||||| |||||||||||||||||||||    
T  30189324 atggggtgtacgatggagtgtgtgaataaatggtgttcatgtaacattttcc 30189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 45490330 - 45490413
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||| |||| |||||||||| |||||||||| |  ||||  ||||||  ||||||||||||||||||||    
T  45490330 gtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttcc 45490413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 51512285 - 51512323
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgta 47  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  51512285 agatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 50526141 - 50526084
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcccatga 94  Q
    |||||||||||||| || || ||| ||||||||||||| |||||||||||||| ||||    
T  50526141 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcctatga 50526084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 41848038 - 41847971
Alignment:
Q  22 aaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||| |||||||| ||||||||||||||||  ||||  ||| ||||| ||||| |||||||||||||    
T  41848038 aaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttcc 41847971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 48435596 - 48435679
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| || || || ||||| ||||||||||||||| | ||||  || |||| ||||||||||||||| |||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 48435679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 31 - 85
Target Start/End: Complemental strand, 54473509 - 54473455
Alignment:
Q  31 ctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatt 85  Q
    ||||||||||| |||||||| || || | ||||||||||||||||||||| ||||    
T  54473509 ctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcatt 54473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 54246165 - 54246248
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 24688419 - 24688502
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttcc 24688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 42100771 - 42100688
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 42100688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 42394436 - 42394518
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 42394518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 25413764 - 25413681
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 25413681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 40808948 - 40808865
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttcc 40808865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 46941136 - 46941053
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttcc 46941053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 45126945 - 45127028
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||  |||| |||||||||||||| ||||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 47191043 - 47191125
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 47191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 53581875 - 53581956
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||  |||||||| ||||||||| || |||||||||||||||| |||||||| ||||||||||||||||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 4190282 - 4190365
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||||||||||||  |||||||||| | ||||| || ||||||||||||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 4190365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 9434207 - 9434124
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| ||||||| || ||||||||||||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 9434124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 36150213 - 36150130
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| || |||||| ||||||| ||||| ||||| ||||||||||| |||||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttcc 36150130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 40480832 - 40480750
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| || |||||||||| |  || ||||||||||||||||||||||||||||    
T  40480832 gtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttc 40480750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 53273701 - 53273784
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||  || |||||||||| | ||||||| |||||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttcc 53273784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 1078309 - 1078229
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||| ||| |||||||| |||||||||  |||||||||||  ||| |||||||||||||||||||||||||||||    
T  1078309 gtgagatgaacctacaaaaatatc-ctaatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||||||  |||||| ||||  ||||| ||||||| |||||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 10457909 - 10457992
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| || |||| ||||||||  |||| ||||||||||||||| | ||||| || |||| |||||||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttcc 10457992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 25996351 - 25996268
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  ||||| ||||||||||||||    |||| || ||||||||||||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttcc 25996268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 29558251 - 29558330
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatt 85  Q
    |||||||||| |||| || ||||  |||||| || ||||||||||||   |||| ||||||||||||||||| |||||||    
T  29558251 gtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt 29558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 34791912 - 34791829
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  ||||| || ||||| |||| ||| ||||||   ||||| || ||||||||||||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttcc 34791829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 51757676 - 51757593
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  |||| |||| |||||||||| | ||||| || ||||||||||| |||||| |||||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttcc 51757593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 52627994 - 52628077
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| |||||||   |||| |||| |||||||||| |  |||| || ||||||||||||| ||||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttcc 52628077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 23441 - 23521
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttcc 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 7273352 - 7273435
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttcc 7273435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 9698350 - 9698433
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 9698433  T

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Target: chr6; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 26670026 - 26670109
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 26670109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 26466882 - 26466799
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||| | ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 24204004 - 24204085
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 30736065 - 30735984
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||  ||||||||||||||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13743238 - 13743321
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13743321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13748738 - 13748821
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| |  |||| ||||||| |||||||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttcc 13748821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 21280012 - 21279929
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| |||||||| |||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttcc 21279929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 30014426 - 30014343
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||  |||||||||||| |||| |||||  ||||||||||||||||||||||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttcc 30014343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 7292830 - 7292747
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| ||||  ||||| ||||||| ||||||| |||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttcc 7292747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 7367632 - 7367549
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||  ||||| ||||||| | ||||||| |||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttcc 7367549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 3213483 - 3213400
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||||| |||| ||||||||  |||||||||||||||||||||   |||| |||||||||||||| ||||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttcc 3213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 21293694 - 21293777
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||||| |||| ||||||||  |||||||||||||||||| || | |||| |||||||||||||| ||||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttcc 21293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||||||  |||||||| || |||||||| | ||||| || ||||||||||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 33242486 - 33242403
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  ||||||||||||||||||||   ||||| || |||| |||||||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttcc 33242403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 31109255 - 31109322
Alignment:
Q  22 aaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||| ||| | ||||||||||| |||||  |||| || ||||||||||||||||||||||||||    
T  31109255 aaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttcc 31109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 33253996 - 33253913
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| || || || ||||| ||||||||||||||| | ||||  || |||| |||||||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttcc 33253913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 1750497 - 1750414
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 19047240 - 19047158
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 19047158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12302270 - 12302353
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 12302353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16096830 - 16096747
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| |||| || |||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  16096830 gtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttcc 16096747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 43490419 - 43490499
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||||||| |||||||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 30838715 - 30838632
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||    ||||| ||||||||||||||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttcc 30838632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 4764743 - 4764826
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||| | |||||||||||||||||||| | ||||||||||||| |||||| ||||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttcc 4764826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 43335780 - 43335863
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||||| |||||||||  ||||||||||||| | ||||||| |||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttcc 43335863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 33229381 - 33229303
Alignment:
Q  10 gatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||| |||||||| ||||||||||||||||||||||  |||||||||| |||||||||||||||| ||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 43114640 - 43114557
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 43114557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| ||||||| || |||| |||||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagagtgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 41281991 - 41282072
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||  ||||| || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12415477 - 12415560
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| || |||| ||||| || ||||| |||||||||||||||   ||||| || ||||||||||||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12415560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12427537 - 12427620
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| || |||| ||||| || ||||| |||||||||||||||   ||||| || ||||||||||||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 12427620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16804051 - 16803968
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  ||||| || ||||| |||||| |||||||| | ||||| || ||||||||||||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16803968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16843333 - 16843250
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  ||||| || ||||| |||||| |||||||| | ||||| || ||||||||||||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 16843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 966877 - 966934
Alignment:
Q  32 taatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  966877 taatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 966934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 8896600 - 8896681
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| |||||||  ||| |  || |||||||||||||| |||  |||||||||||||||||||||||||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 18491788 - 18491705
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| |   |||| |||| |||||||||| | ||||| || ||||||||||||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 18491705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 34817824 - 34817875
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||||  ||||  ||||||||||||||||||||||||||||    
T  34817824 catggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttc 34817875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 89
Target Start/End: Original strand, 42849907 - 42849946
Alignment:
Q  50 atggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  42849907 atggggtgtaggaataaagggtgttcatgtaacattttcc 42849946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 89
Target Start/End: Complemental strand, 14285758 - 14285676
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||| ||||||||| ||||| || ||||||||||| | ||||| || |||||||||||  ||||| |||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttcc 14285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 42026852 - 42026767
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaa--gggtgttcatgtaacattttcc 89  Q
    |||||||||| || | |||||||| ||||| |  ||| ||||||||||| |||| |||||||  ||||||||||||||||||||||    
T  42026852 gtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttcc 42026767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 4299437 - 4299518
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||| ||  |||| ||||| ||||||||| | ||||| || |||||||||||||| |||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 13780752 - 13780835
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  |||||||| |||||  |||||||||||||||  ||||  |||||||  ||||| ||||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttcc 13780835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 34895758 - 34895841
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| || || || ||||| ||||||||||||||| | ||||  || |||| ||||||||||||||| |||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttcc 34895841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 87
Target Start/End: Complemental strand, 7070459 - 7070418
Alignment:
Q  46 tacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  7070459 tacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 39149313 - 39149354
Alignment:
Q  10 gatgaacttacgaaaatatctctaatacatggggtgtacaat 51  Q
    ||||||||||| |||||||||||||||||| || ||||||||    
T  39149313 gatgaacttaccaaaatatctctaatacataggatgtacaat 39149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 20700945 - 20700997
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| || || | ||||||||||||||  ||||||||||||||    
T  20700945 catggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 20700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 43571103 - 43571186
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 43571186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 5489859 - 5489776
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 5489776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 48498979 - 48499062
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 48499062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 4401411 - 4401329
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaat-aaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  4401411 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 24769523 - 24769599
Alignment:
Q  13 gaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttcc 24769599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 50448280 - 50448360
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||| |||||||| |||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 50448360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 2497579 - 2497660
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| ||||||||  ||||| ||||||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||  ||||||||| ||||||||||| ||||||||||  |||||||||||||| |||||||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacatggg-tgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 44112760 - 44112677
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 44112677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 48119711 - 48119628
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 48119628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 750323 - 750405
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| |||  |||||||| || |||||||||||||||||||| |||||||||  ||||||||||| ||||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttcc 750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 23989540 - 23989624
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaa-gggtgttcatgtaacattttcc 89  Q
    ||||||| || |||| |||||||| ||||||||| |||| |||||| ||||||| ||||||| ||||||||||||||||||||||    
T  23989540 gtgagataaatttaccaaaatatccctaatacatagggtatacaattgagtgtatgaataaaagggtgttcatgtaacattttcc 23989624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 37814861 - 37814777
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccc 90  Q
    |||| ||||| |||| ||||||||  |||||||||||||||||||||   |||| |||||||||||||| |||||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttccc 37814777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 35003377 - 35003294
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  ||||  |||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 38113212 - 38113295
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||  |||| ||||||||||||||| | ||||| || |||||||||||||| |||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttcc 38113295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 38336001 - 38335918
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| |||||| ||||||||   ||||| || ||||||||||||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttcc 38335918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 41065236 - 41065153
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| |||||  | ||||| ||||||||||||||  | ||||| || ||||||||||||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttcc 41065153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 46168466 - 46168382
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccc 90  Q
    |||||||||| |||| ||||||||  |||| ||| ||||||||||| |  | || || |||||||||||||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttccc 46168382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 45427762 - 45427845
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||| ||||||||| | ||||| || |||| ||| |||||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttcc 45427845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 45639749 - 45639832
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  ||||  |||||||||||||| |  |||| || ||||| ||||||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttcc 45639832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 14427404 - 14427347
Alignment:
Q  32 taatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||| |||| |||||||||| | ||||| || ||||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 14427347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 26585543 - 26585462
Alignment:
Q  8 gagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||| |||| ||||||||  |||| |||||||||||||||  |||||| || |||||  ||||||| |||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttcc 26585462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 51898653 - 51898601
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| || || ||| ||||||||||||| ||||||||||||||    
T  51898653 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 35000146 - 35000213
Alignment:
Q  22 aaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||| || ||||||||||  || |||||| ||||||| || |||| |||||||||||||||||||||    
T  35000146 aaaatgtccctaatacatgaagtatacaatagagtgtatgattaaaaggtgttcatgtaacattttcc 35000213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 45705908 - 45705825
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  ||||| ||  |||| ||||| ||||||||| || |||| || |||||||||||||| |||||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttcc 45705825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 4888088 - 4888055
Alignment:
Q  56 tgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| ||||||||||||||||||    
T  4888088 tgtaggaataaagggcgttcatgtaacattttcc 4888055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 112738 - 112656
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttc 112656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 42972935 - 42972850
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccca 91  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttccca 42972850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 5015478 - 5015395
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 5015395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 24001029 - 24001112
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 24001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 42538448 - 42538531
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 42538531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 35069804 - 35069721
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttcc 35069721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 5810941 - 5811024
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||  |||||||| |||||| || ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttcc 5811024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| ||||||||  ||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgagtgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 9216384 - 9216302
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||||||||| |||||| |||||||| |  | ||||||||||||||||||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttcc 9216302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| | |||||| |||||| | |||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 44326261 - 44326180
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||||||||  |||| |||||||||||||| ||||||||||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||| | |||||| |||||| | |||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 27535248 - 27535331
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||| ||| |||||| ||||||||| ||||||| || ||||||||||||||||||||||||||    
T  27535248 gtgagatgaaattaccaaaatgtctttaacacatggagtgtacaatagagtgtatgattaaagggtgttcatgtaacattttcc 27535331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 41861759 - 41861674
Alignment:
Q  6 gtgagatgaacttacgaaaatatctcta--atacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| ||||||| ||||||||||||  |||||| ||||||| ||| | ||||| |||||||||||||||||||||||||||||    
T  41861759 gtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttcc 41861674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| |||||||  ||||||||||||||||||||| |  |||| |||||||||||||| ||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 16180374 - 16180454
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||||| | |||||| ||||||||||||||| ||||||||||||| |||||| ||||||||||||    
T  16180374 gtgagatgaatttaccaaaatatttataatacgtggggtgtacaatgg-gtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 86
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattt 86  Q
    |||||||||||| |||||||| |||||||||||  |||||||| | ||||| ||||||| ||||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 38160596 - 38160656
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataa 66  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  38160596 gtgagatgaagttactaaaatatccctaatacatggggtgtacaatggagtgtaagaataa 38160656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 32029837 - 32029908
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgta 80  Q
    ||||||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||  ||||| |||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 40237002 - 40236919
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| |  |||| || ||||||||||||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttcc 40236919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 45326103 - 45326020
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||   |||| ||||||| |||||| |||||||| |||||    
T  45326103 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttcc 45326020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 31408650 - 31408732
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    |||| ||||| |||| ||||||||  |||| |||||| |||||||| ||||||| || |||||||||||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagagtgtatgattaaagggtgttcatgtaacattttc 31408732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 27393277 - 27393361
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccca 91  Q
    ||||||||||||||| |||||||| ||||||||| | ||||||||| |  ||||||||||||||||| | ||||| ||||||||||    
T  27393277 gtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtg-tgatgtagcattttccca 27393361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 5194248 - 5194331
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  ||||||||  ||| |||| ||||||||||||  ||||| ||||||| |||||||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 5194331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 24280613 - 24280696
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||| |||| | |||||| |||| ||| | ||||| |||||||||||||||| ||||||||||||    
T  24280613 gtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttcc 24280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 31513370 - 31513287
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||||||  |||| |||||||| |||||| | ||||| || ||||| ||||||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttcc 31513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 39998476 - 39998408
Alignment:
Q  21 gaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||| ||||||||||||||||||||| |  |||| || ||||  ||||||||||||||||||||    
T  39998476 gaaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttcc 39998408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 43317526 - 43317443
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||  |||||||| ||||  ||| || |||||||||  ||||| ||||||| |||||||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttcc 43317443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 38160661 - 38160694
Alignment:
Q  56 tgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||||||||||||||||||    
T  38160661 tgtaggaataaagggtgttcatgtaacattttcc 38160694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 47279744 - 47279797
Alignment:
Q  36 acatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||||||  |||| ||||||||||| || |||||| |||||||    
T  47279744 acatggggtgtacaatgggatgtatgaataaagggtatttatgtaatattttcc 47279797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 33384954 - 33384870
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaat-ggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||| || |||||| || ||||| || |||| | |||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttcc 33384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 41423812 - 41423864
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| || || |  |||||||||||||| ||||||||||||||    
T  41423812 catggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 2165981 - 2166065
Alignment:
Q  7 tgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttccca 91  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||| |||||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttccca 2166065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 2547079 - 2546996
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttcc 2546996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11582849 - 11582766
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 11582766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 29705445 - 29705362
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 29705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 36743500 - 36743583
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttcc 36743583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 45397399 - 45397317
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 88  Q
    ||||||||||||||| |||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||    
T  45397399 gtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttc 45397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||| |||| |||||||||||||| ||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 30912579 - 30912660
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||| | ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 42699340 - 42699259
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| ||||||||  ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 30660762 - 30660842
Alignment:
Q  9 agatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttcc 30660842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 5754986 - 5754903
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||| ||||| ||||||||||  |||||||||||| |||||||||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttcc 5754903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 42197452 - 42197535
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| | |||| |||||| ||||||||||||| |||||||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttcc 42197535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 29800967 - 29801048
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||  |||| ||||||| |||||| ||||||||||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 18066735 - 18066818
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| |||||||| |||||||||||| |||||||| || |||| || ||||||||||||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttcc 18066818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 31384747 - 31384672
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaa 81  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||| || |||| |||||||||||||||||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 20148843 - 20148762
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    ||||||||||||||| |||||||| |||||| ||| ||||||||||||  |||| |||||||||||||| ||||||||||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 35181599 - 35181516
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| | ||||| || ||||||||||||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttcc 35181516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 1375625 - 1375542
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||| || |||| |||||||| |||||| |||||||||||||| | ||||| ||||||| ||||||||||||| |||||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttcc 1375542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 34304871 - 34304788
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| || ||||| ||||||||||||||| | ||||| || |||||| |||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttcc 34304788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 33630010 - 33630091
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||| || ||||| ||| ||||||||||||  ||||| || |||||||||||| |||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 16603643 - 16603726
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| ||||| ||| |||| ||||||||||| |||   ||||| || |||||||||| |||||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttcc 16603726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 28977180 - 28977146
Alignment:
Q  55 gtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||||||||||||||||||||||||    
T  28977180 gtgtaggaataaagggtgttcatgtaacattttcc 28977146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 37038609 - 37038661
Alignment:
Q  37 catggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||||||| || || ||| ||||||||||||| ||||||||||||||    
T  37038609 catggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 768 - 685
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttcc 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 14205 - 14288
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||    
T  14205 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 14288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 24533 - 24616
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| ||||||||| || |||||||||| |||||| ||||||||||||||||||||||||||||    
T  24533 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttcc 24616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 11334 - 11251
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttcc 11251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 87  Q
    |||||||||| |||| ||||||||  |||||||| || |||||||| | ||||| || ||||||||||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 35473 - 35556
Alignment:
Q  6 gtgagatgaacttacgaaaatatctctaatacatggggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 89  Q
    |||||||||| |||| || || || ||||| |||||||||||||||   ||||| || |||| |||||| ||||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttcc 35556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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