View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2113_low_10 (Length: 325)
Name: NF2113_low_10
Description: NF2113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2113_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 38 - 312
Target Start/End: Original strand, 20714922 - 20715190
Alignment:
| Q |
38 |
tataatcaacacagcaacataaaattacaaaacaatgccttaaagttaaacttcaacaatgtagtacactttaatttcaaaatagttgttcaacttcaaa |
137 |
Q |
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| T |
20714922 |
tataatcaacacagcaacataaaattacaaaacaatgccttaa------acttcaacaatgtagtacactttaattttaaaatagttgttcaacttcaaa |
20715015 |
T |
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| Q |
138 |
agattgaaatttcagcaacactaactacaacaaccagaaaacaaaatcattagttgactgcatacatgaattgtctccaacaattgatggttcataatat |
237 |
Q |
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| T |
20715016 |
agattgaaatttcggcaacattaactacaacaaccagaaaacaaaatcattagttgactacatacatgaattgtctccaacaattgatggttcataatat |
20715115 |
T |
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| Q |
238 |
tggtagttaatggcttgttccttcttgtgaaaaaatcatattttcctgtatgatgacttcatgcttatcttcatc |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
20715116 |
tggtagttaatggcttgttccttcttgtgaaaaaatcatattttcttgtatgatgacttcatgcttatcttcatc |
20715190 |
T |
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