View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2113_low_16 (Length: 250)
Name: NF2113_low_16
Description: NF2113
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2113_low_16 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 37954572 - 37954806
Alignment:
| Q |
16 |
ctgagatgagttggattgaatcagttatctaccatggtggttttacaagtgattttacaagtgctcaaccccttgaagttttgttgaatagaactcatag |
115 |
Q |
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| T |
37954572 |
ctgagatgagttggattgaatcagttatctaccatggtggttttacaagtgattttacaagtgatcaaccccttgaagttttgttgaatagaactcatag |
37954671 |
T |
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| Q |
116 |
tggtgtgttgtttttcaaggcaaaatctgattatgtgagagatcctattcctgatattgggttagaagggttgtggccaatgttttatgaagacgaggct |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37954672 |
tggtgtgttgtttttcaaggcaaaatctgattatgtgagagatcctattcctgatattgggttagaagggttgtggccaatgttttatgaagacgaggct |
37954771 |
T |
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| Q |
216 |
aaatccgcggtgttgatattcactccttatggtgg |
250 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
37954772 |
aaatccgcggtgttgatattcactccttatggtgg |
37954806 |
T |
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