View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21142_low_15 (Length: 218)
Name: NF21142_low_15
Description: NF21142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21142_low_15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 40958640 - 40958806
Alignment:
| Q |
51 |
aaataaataaatagatattttagaatgtgaaaatgtaaccnnnnnnnnnnntacatggacttcaattgataacannnnnnnncactcttccatgataagt |
150 |
Q |
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| T |
40958640 |
aaataaataaatagatattttagaatgtgaaaatgtaaccaaaaaaaaaa-tacatggacttcaattgataacattttttttcactcttccatgataagt |
40958738 |
T |
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| Q |
151 |
gcgtttggttacatggttagcattaaaaagtgcatatcaagaactagaagatatgatatttttaaaat |
218 |
Q |
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| T |
40958739 |
gcgtttggttacatggttagcattaaaaagtgcatatcaagaactagaagatatgatattttttaaat |
40958806 |
T |
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