View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21143_low_3 (Length: 463)
Name: NF21143_low_3
Description: NF21143
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21143_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 18 - 456
Target Start/End: Original strand, 46061732 - 46062170
Alignment:
| Q |
18 |
cttgttgctttgtggacaaataatttattgtttcacataattaaagaggacaaaccatgcaattacatgcatcgccatactcgttatcattacatataat |
117 |
Q |
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| T |
46061732 |
cttgttgctttgtggacaaataatttattgtttcacataattaaagaggacaaaccatgcaattacatgcatcgccatactcgttatcataacatataat |
46061831 |
T |
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| Q |
118 |
ctttaatgtaagtttaggaataattatcattaatgaattaccttccgaagcattccctcaagacgttgaatctcgttcttcgcataatctgcacctttta |
217 |
Q |
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| T |
46061832 |
ctttaatgtaagtttaggaataattatcattaatgaattaccttccgaagcattccctcaagacgttgaatctcgttcttcgcataatctgcacctttta |
46061931 |
T |
|
| Q |
218 |
ccatactgctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaacaacttaactagggcct |
317 |
Q |
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| T |
46061932 |
ccatactgctcttagcaagttttaagtagaggttgccatatctgaaataccacaaaaaccaacatcagataattaatatcaaacaacttaactagggcct |
46062031 |
T |
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| Q |
318 |
cacnnnnnnnccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaacccttaagcgtatta |
417 |
Q |
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| T |
46062032 |
cacaaaaaaaccaattcaaattataaaactcaagcaaaccagaacaaatcaagaaatgtgatatcattcaaaccttgcagtagaacccttaagcgtatta |
46062131 |
T |
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| Q |
418 |
actttctctacaagtctggaaaagacaatcttcttctca |
456 |
Q |
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| T |
46062132 |
actttctctacaagtctggaaaagacaatcttcttctca |
46062170 |
T |
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