View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21144_low_7 (Length: 239)
Name: NF21144_low_7
Description: NF21144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21144_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48740779 - 48740996
Alignment:
| Q |
1 |
tatatttttagctaaaggtttaaaaaataaatatttgtctaaaacaatacctgatgtcaacatgctgaaaagactcaactaagaaagattatgttctttg |
100 |
Q |
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| T |
48740779 |
tatatttttagctaaaggtttaaaaaataaatatttgtctaaaacaatacctgatgtcaacatgctgaaaagactcaactaagaaagattatgttctttg |
48740878 |
T |
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| Q |
101 |
tagataagaagnnnnnnnttgttaacggtacgtaaatcacagccagaaagaatttactcgatatgacattaactaaaggataaggaaatcagcaaatatt |
200 |
Q |
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| T |
48740879 |
tagataagaagaaaaaaattgttaacggcacgtaaatcacagccagaaagaatttactcgatatgacattaactaaa-gataaggaaatcagca------ |
48740971 |
T |
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| Q |
201 |
aatatacaataggaatagttcatat |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
48740972 |
aatatacaataggaatagttcatat |
48740996 |
T |
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