View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21145_high_5 (Length: 252)

Name: NF21145_high_5
Description: NF21145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21145_high_5
NF21145_high_5
[»] chr1 (32 HSPs)
chr1 (6-143)||(47772342-47772479)
chr1 (150-235)||(9981644-9981729)
chr1 (152-235)||(26471113-26471196)
chr1 (152-235)||(27159406-27159489)
chr1 (152-235)||(44668141-44668224)
chr1 (153-235)||(31842843-31842925)
chr1 (153-235)||(39402014-39402096)
chr1 (153-235)||(47216747-47216829)
chr1 (151-235)||(34042694-34042778)
chr1 (152-235)||(11795932-11796015)
chr1 (152-235)||(14984836-14984919)
chr1 (153-235)||(1050888-1050970)
chr1 (153-235)||(23278049-23278131)
chr1 (153-235)||(44955254-44955336)
chr1 (153-235)||(47777529-47777611)
chr1 (152-235)||(12483676-12483759)
chr1 (152-235)||(47588385-47588468)
chr1 (167-235)||(25694333-25694401)
chr1 (150-235)||(17556749-17556835)
chr1 (159-235)||(47969700-47969777)
chr1 (152-235)||(11897053-11897136)
chr1 (151-234)||(16448157-16448240)
chr1 (149-227)||(12213530-12213608)
chr1 (153-234)||(37552141-37552222)
chr1 (151-207)||(37552217-37552273)
chr1 (152-199)||(11897138-11897185)
chr1 (168-235)||(11989796-11989863)
chr1 (152-199)||(34042780-34042827)
chr1 (152-209)||(12483627-12483684)
chr1 (150-199)||(25694403-25694452)
chr1 (159-199)||(44955212-44955252)
chr1 (151-199)||(47216697-47216745)
[»] chr6 (25 HSPs)
chr6 (149-235)||(2830331-2830417)
chr6 (151-235)||(11572193-11572277)
chr6 (152-235)||(8383017-8383100)
chr6 (152-235)||(33052842-33052925)
chr6 (153-235)||(6330115-6330197)
chr6 (153-235)||(26602323-26602405)
chr6 (151-235)||(8099528-8099612)
chr6 (151-235)||(35031049-35031133)
chr6 (152-235)||(13853641-13853724)
chr6 (152-235)||(6143553-6143636)
chr6 (153-235)||(9644696-9644778)
chr6 (153-235)||(9650713-9650795)
chr6 (153-235)||(13043758-13043840)
chr6 (152-235)||(6068565-6068648)
chr6 (168-235)||(8417841-8417908)
chr6 (169-235)||(28747182-28747248)
chr6 (183-235)||(17992018-17992070)
chr6 (161-232)||(6068991-6069062)
chr6 (153-235)||(22896471-22896544)
chr6 (150-209)||(3788111-3788170)
chr6 (148-199)||(6330199-6330250)
chr6 (172-210)||(6549902-6549940)
chr6 (150-199)||(11572142-11572191)
chr6 (158-235)||(14936505-14936582)
chr6 (151-199)||(13853591-13853639)
[»] chr7 (22 HSPs)
chr7 (150-235)||(38063961-38064046)
chr7 (152-235)||(1565777-1565860)
chr7 (152-235)||(1738495-1738578)
chr7 (152-235)||(7240748-7240831)
chr7 (152-235)||(46840859-46840942)
chr7 (153-235)||(31319447-31319529)
chr7 (151-235)||(7482223-7482307)
chr7 (152-235)||(9268755-9268838)
chr7 (152-235)||(28536799-28536882)
chr7 (153-231)||(23314191-23314269)
chr7 (153-235)||(36583395-36583477)
chr7 (152-235)||(22285698-22285781)
chr7 (153-235)||(94366-94448)
chr7 (153-235)||(36016244-36016326)
chr7 (153-235)||(38441460-38441542)
chr7 (152-235)||(4790247-4790330)
chr7 (169-235)||(33418392-33418458)
chr7 (152-235)||(9575408-9575491)
chr7 (159-227)||(40840175-40840243)
chr7 (153-199)||(31319399-31319445)
chr7 (150-199)||(9268840-9268889)
chr7 (151-199)||(1565727-1565775)
[»] chr3 (36 HSPs)
chr3 (150-235)||(19557100-19557185)
chr3 (150-235)||(49823429-49823514)
chr3 (152-235)||(4238593-4238676)
chr3 (152-235)||(22721930-22722013)
chr3 (152-235)||(38964391-38964474)
chr3 (152-235)||(44785444-44785527)
chr3 (153-235)||(10297979-10298061)
chr3 (152-235)||(2787880-2787963)
chr3 (152-235)||(8437424-8437507)
chr3 (152-235)||(8817434-8817517)
chr3 (152-235)||(21295374-21295457)
chr3 (152-235)||(34080078-34080161)
chr3 (153-235)||(17653712-17653794)
chr3 (153-235)||(37508921-37509003)
chr3 (153-235)||(48340397-48340479)
chr3 (153-235)||(51406673-51406755)
chr3 (151-235)||(36095728-36095812)
chr3 (151-235)||(46208028-46208112)
chr3 (152-235)||(9111542-9111625)
chr3 (152-235)||(40691044-40691127)
chr3 (152-235)||(42507403-42507486)
chr3 (153-235)||(35513473-35513555)
chr3 (152-235)||(42170394-42170477)
chr3 (169-231)||(6013388-6013450)
chr3 (167-235)||(33942980-33943048)
chr3 (170-235)||(8951944-8952009)
chr3 (151-199)||(37509005-37509053)
chr3 (151-199)||(46208114-46208162)
chr3 (152-199)||(4238678-4238725)
chr3 (152-199)||(17653796-17653843)
chr3 (153-199)||(21295326-21295372)
chr3 (150-208)||(33128203-33128261)
chr3 (153-199)||(44785396-44785442)
chr3 (150-178)||(29457963-29457991)
chr3 (167-235)||(43323074-43323142)
chr3 (151-199)||(49823379-49823427)
[»] chr2 (29 HSPs)
chr2 (150-235)||(4683980-4684065)
chr2 (151-235)||(3055556-3055640)
chr2 (151-235)||(15896840-15896924)
chr2 (152-235)||(13344483-13344566)
chr2 (152-235)||(37990061-37990144)
chr2 (152-235)||(41478687-41478770)
chr2 (152-235)||(44397546-44397629)
chr2 (152-235)||(44398685-44398768)
chr2 (153-235)||(13197758-13197840)
chr2 (153-235)||(12337985-12338067)
chr2 (153-235)||(16044365-16044447)
chr2 (153-235)||(37666658-37666740)
chr2 (150-235)||(16243831-16243916)
chr2 (152-235)||(38917570-38917653)
chr2 (153-235)||(6648567-6648649)
chr2 (152-235)||(9047803-9047886)
chr2 (152-235)||(15372225-15372308)
chr2 (150-235)||(30099230-30099315)
chr2 (167-235)||(41492944-41493012)
chr2 (153-235)||(12170447-12170529)
chr2 (181-235)||(44804626-44804680)
chr2 (167-233)||(31150667-31150733)
chr2 (172-235)||(16734802-16734865)
chr2 (184-235)||(41453090-41453141)
chr2 (152-199)||(41492895-41492942)
chr2 (168-234)||(4553059-4553125)
chr2 (149-199)||(44398770-44398820)
chr2 (151-199)||(13344568-13344616)
chr2 (151-199)||(38917520-38917568)
[»] chr8 (31 HSPs)
chr8 (151-235)||(43199402-43199486)
chr8 (152-235)||(54660-54743)
chr8 (152-235)||(2890210-2890293)
chr8 (152-235)||(7785826-7785909)
chr8 (152-235)||(7805747-7805830)
chr8 (153-235)||(3304326-3304408)
chr8 (153-235)||(6552655-6552737)
chr8 (153-235)||(12343188-12343270)
chr8 (153-235)||(32114523-32114605)
chr8 (153-235)||(39571251-39571333)
chr8 (153-235)||(44498235-44498317)
chr8 (150-234)||(25601049-25601133)
chr8 (152-235)||(12763702-12763785)
chr8 (152-235)||(32211411-32211494)
chr8 (152-235)||(33289309-33289392)
chr8 (153-235)||(7012171-7012253)
chr8 (153-235)||(15888400-15888482)
chr8 (153-235)||(31654613-31654695)
chr8 (151-235)||(13578855-13578939)
chr8 (152-215)||(4245649-4245712)
chr8 (153-235)||(8587170-8587252)
chr8 (156-231)||(28463614-28463689)
chr8 (150-207)||(25600997-25601054)
chr8 (167-210)||(13246808-13246851)
chr8 (152-207)||(27422266-27422321)
chr8 (150-199)||(2890159-2890208)
chr8 (158-235)||(17006916-17006993)
chr8 (158-235)||(17570254-17570331)
chr8 (151-234)||(27422191-27422271)
chr8 (151-199)||(54610-54658)
chr8 (153-197)||(11809114-11809158)
[»] scaffold0482 (1 HSPs)
scaffold0482 (152-235)||(12859-12942)
[»] scaffold0204 (1 HSPs)
scaffold0204 (152-235)||(23784-23867)
[»] chr5 (23 HSPs)
chr5 (152-235)||(37149003-37149086)
chr5 (153-235)||(9395350-9395432)
chr5 (152-235)||(582988-583071)
chr5 (152-235)||(20848073-20848156)
chr5 (152-235)||(23359941-23360024)
chr5 (152-235)||(36563586-36563669)
chr5 (152-235)||(41989455-41989538)
chr5 (153-235)||(11795168-11795250)
chr5 (152-235)||(13033050-13033133)
chr5 (152-235)||(13103023-13103106)
chr5 (153-235)||(26350398-26350480)
chr5 (152-235)||(17025623-17025706)
chr5 (152-235)||(37641952-37642036)
chr5 (152-235)||(4443959-4444042)
chr5 (152-231)||(38361743-38361822)
chr5 (177-235)||(21575970-21576028)
chr5 (174-235)||(6126845-6126906)
chr5 (160-235)||(13539915-13539986)
chr5 (153-199)||(23360026-23360072)
chr5 (158-207)||(966224-966273)
chr5 (150-199)||(21576030-21576079)
chr5 (151-199)||(17025708-17025756)
chr5 (202-234)||(35904448-35904480)
[»] chr4 (36 HSPs)
chr4 (152-235)||(3372120-3372203)
chr4 (152-235)||(47833610-47833693)
chr4 (152-235)||(48336262-48336345)
chr4 (153-235)||(6121941-6122023)
chr4 (153-235)||(20538734-20538816)
chr4 (153-231)||(46797725-46797803)
chr4 (153-235)||(53337370-53337452)
chr4 (153-234)||(24704370-24704451)
chr4 (150-235)||(33551198-33551283)
chr4 (151-235)||(33621794-33621878)
chr4 (152-235)||(3992975-3993058)
chr4 (152-235)||(42797731-42797814)
chr4 (150-235)||(7579307-7579392)
chr4 (150-231)||(26231574-26231655)
chr4 (151-235)||(3904731-3904815)
chr4 (151-235)||(47838665-47838749)
chr4 (152-235)||(43900548-43900631)
chr4 (153-235)||(5986876-5986958)
chr4 (153-235)||(52756675-52756757)
chr4 (150-231)||(40913241-40913322)
chr4 (152-235)||(51894630-51894713)
chr4 (152-235)||(41469814-41469897)
chr4 (167-235)||(3422075-3422142)
chr4 (167-235)||(41615724-41615792)
chr4 (150-235)||(25855080-25855165)
chr4 (159-224)||(17344219-17344284)
chr4 (171-227)||(29845663-29845719)
chr4 (168-235)||(50430466-50430533)
chr4 (153-207)||(4780371-4780425)
chr4 (159-225)||(17236845-17236912)
chr4 (168-235)||(31013036-31013103)
chr4 (153-199)||(7579394-7579440)
chr4 (153-199)||(42797816-42797862)
chr4 (158-199)||(40913194-40913235)
chr4 (158-210)||(21636196-21636248)
chr4 (151-207)||(24704446-24704502)
[»] scaffold1707 (1 HSPs)
scaffold1707 (152-235)||(1334-1417)
[»] scaffold0009 (2 HSPs)
scaffold0009 (152-235)||(49504-49587)
scaffold0009 (153-209)||(49579-49635)
[»] scaffold0464 (1 HSPs)
scaffold0464 (153-235)||(6179-6261)
[»] scaffold0650 (1 HSPs)
scaffold0650 (150-235)||(33-117)
[»] scaffold0415 (1 HSPs)
scaffold0415 (171-227)||(13782-13838)
[»] scaffold0011 (1 HSPs)
scaffold0011 (153-228)||(231358-231433)


Alignment Details
Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 6 - 143
Target Start/End: Complemental strand, 47772479 - 47772342
Alignment:
6 tattctcgtgggaagaaggacagctttgatctcttcaatatat----ttcaaaagaaaagtattattatatggagaaatgttcacaattccaatccaaag 101  Q
    ||||||||||| |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
47772479 tattctcgtggaaagaaggacagctttgatctcttcaatatatcactttcaaaagaaaagtattattatatggagaaatgttcacgattccgatccaaag 47772380  T
102 ggtggatggatgtagatgggagtagtttcaatggtttttaat 143  Q
    ||||    ||||||||||||||||||||||||||||||||||    
47772379 ggtg----gatgtagatgggagtagtttcaatggtttttaat 47772342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 9981644 - 9981729
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
9981644 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 9981729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 26471196 - 26471113
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
26471196 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 26471113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 27159489 - 27159406
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
27159489 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 27159406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 44668224 - 44668141
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44668224 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44668141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 31842925 - 31842843
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
31842925 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 31842843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 39402096 - 39402014
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
39402096 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 39402014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 47216829 - 47216747
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
47216829 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 47216747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 34042694 - 34042778
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
34042694 tatactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatc 34042778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 11795932 - 11796015
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
11795932 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatc 11796015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 14984836 - 14984919
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
14984836 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 14984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 1050888 - 1050970
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
1050888 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatc 1050970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 23278131 - 23278049
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
23278131 tactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatc 23278049  T

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Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 44955336 - 44955254
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44955336 tactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44955254  T

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Target: chr1; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 47777611 - 47777529
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
47777611 tactacccccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatc 47777529  T

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Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 12483759 - 12483676
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||    
12483759 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatc 12483676  T

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Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 47588468 - 47588385
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
47588468 atactacctctggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatc 47588385  T

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Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 25694333 - 25694401
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
25694333 ctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatc 25694401  T

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Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 17556749 - 17556835
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaa-tgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||| ||| |||||||||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||||    
17556749 atatactccctctggtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatc 17556835  T

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Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 159 - 235
Target Start/End: Original strand, 47969700 - 47969777
Alignment:
159 ctccggttctatttataa-gagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
47969700 ctccggtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatc 47969777  T

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Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 11897053 - 11897136
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||||||| |||||||||||||||| |||| |||||||||||  |||||| || ||||||||||||||  ||||||||    
11897053 atactccctccggtcctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaaccggatacatc 11897136  T

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Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 16448240 - 16448157
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    |||||| |||||||| |||||||||||||||| || | |||||||||||  |||||| ||||||||||||| ||| ||||||||    
16448240 tatactccctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacat 16448157  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 227
Target Start/End: Complemental strand, 12213608 - 12213530
Alignment:
149 gatatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaacta 227  Q
    |||||||| ||||| ||  ||||||||||||||  |||| ||||||||| | ||||||||| || ||||||||||||||    
12213608 gatatactccctccagtcttatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaacta 12213530  T

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Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 37552141 - 37552222
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    |||| |||||||| |||||||||||| ||| ||   ||||||| |||  |||||| ||||||||||||||||| ||||||||    
37552141 tactccctccggtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacat 37552222  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 37552273 - 37552217
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    |||||| || ||||| ||||||||||||||||||| | ||||||||| |||||||||    
37552273 tatactccccccggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 37552217  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 11897185 - 11897138
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||| |||||||| ||||||||||||||||||| | |||||||||||    
11897185 atactccctccggtcctatttataagagaaatttgggtcaacaaaagt 11897138  T

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Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 11989796 - 11989863
Alignment:
168 tatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| || | |||||||||   ||| ||||||||||||||||||||| | |||||||    
11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatc 11989863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 34042827 - 34042780
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||| |||||||||||||||||||||||| ||| | |||||||||||    
34042827 atactccctccggttctatttataagagaattttgggtcaacaaaagt 34042780  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 12483627 - 12483684
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtattt 209  Q
    ||||| |||||||| ||||||||||||||| ||| | |||||||||||  ||||||||    
12483627 atactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 12483684  T

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Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 25694452 - 25694403
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
25694452 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 25694403  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Original strand, 44955212 - 44955252
Alignment:
159 ctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| ||||||||||||||| ||||| |||||||||||    
44955212 ctccggtcctatttataagagaattttaggtcaacaaaagt 44955252  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 47216697 - 47216745
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
47216697 tatactccctccggtactatttataagagaattttgggtcaacaaaagt 47216745  T

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Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 2830331 - 2830417
Alignment:
149 gatatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
2830331 gatatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 2830417  T

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Target: chr6; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 11572277 - 11572193
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
11572277 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 11572193  T

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Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 8383100 - 8383017
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
8383100 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 8383017  T

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Target: chr6; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 33052925 - 33052842
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
33052925 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 33052842  T

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Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 6330115 - 6330197
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
6330115 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 6330197  T

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Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 26602323 - 26602405
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
26602323 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 26602405  T

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Target: chr6; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 8099528 - 8099612
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
8099528 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatc 8099612  T

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Target: chr6; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 35031133 - 35031049
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
35031133 tatactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 35031049  T

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Target: chr6; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 13853724 - 13853641
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
13853724 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 13853641  T

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Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 6143553 - 6143636
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
6143553 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatc 6143636  T

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Target: chr6; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 9644696 - 9644778
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
9644696 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatc 9644778  T

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Target: chr6; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 9650713 - 9650795
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
9650713 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatc 9650795  T

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Target: chr6; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 13043758 - 13043840
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||||||||||||    
13043758 tactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatc 13043840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 6068565 - 6068648
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
6068565 atactacctccggtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatc 6068648  T

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Target: chr6; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 8417908 - 8417841
Alignment:
168 tatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
8417908 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatc 8417841  T

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Target: chr6; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 28747248 - 28747182
Alignment:
169 atttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatc 28747182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 17992018 - 17992070
Alignment:
183 tttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||    
17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatc 17992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 6069062 - 6068991
Alignment:
161 ccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatac 232  Q
    ||||| |||||||||| ||| |||||| ||||||||||| ||||||||||| || ||||||||||| |||||    
6069062 ccggtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaactcgatac 6068991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 22896471 - 22896544
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| ||||||||||||||| ||||| ||||||         ||||||||||||||||||||||||||||||||    
22896471 tactccctccggtcctatttataagagaagtttaggtcaaca---------gtatttggactgaatttttaactagatacatc 22896544  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 3788170 - 3788111
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtattt 209  Q
    ||||||| ||||||||  ||||||||||| |||||||| |||||||||||  ||||||||    
3788170 atatactccctccggtcttatttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 199
Target Start/End: Complemental strand, 6330250 - 6330199
Alignment:
148 cgatatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
6330250 cgatatactccctccggtcctatttataagagaattttgggtcaacaaaagt 6330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 210
Target Start/End: Original strand, 6549902 - 6549940
Alignment:
172 tataagagaaatttagttcaacaaaagtgaatgtatttg 210  Q
    |||||||||||||||| ||||||||||| ||||||||||    
6549902 tataagagaaatttaggtcaacaaaagttaatgtatttg 6549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 11572142 - 11572191
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
11572142 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 11572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 14936582 - 14936505
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| ||| |||||||||||||| |||| | ||||||| |||  |||||||||||   |||| |||||||||||||||    
14936582 cctctggtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatc 14936505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 13853591 - 13853639
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
13853591 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 13853639  T

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Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 38064046 - 38063961
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
38064046 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 38063961  T

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Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 1565860 - 1565777
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
1565860 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 1565777  T

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Target: chr7; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 1738578 - 1738495
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
1738578 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 1738495  T

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Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 7240748 - 7240831
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
7240748 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 7240831  T

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Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 46840859 - 46840942
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
46840859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 46840942  T

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Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 31319529 - 31319447
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
31319529 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 31319447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 7482223 - 7482307
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
7482223 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatc 7482307  T

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Target: chr7; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 9268755 - 9268838
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
9268755 atactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 9268838  T

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Target: chr7; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 28536882 - 28536799
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
28536882 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatc 28536799  T

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Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 23314269 - 23314191
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
23314269 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagata 23314191  T

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Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 36583395 - 36583477
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
36583395 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatc 36583477  T

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Target: chr7; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 22285698 - 22285781
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
22285698 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 22285781  T

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Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 94448 - 94366
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
94448 tactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatc 94366  T

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Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 36016326 - 36016244
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
36016326 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 36016244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 38441460 - 38441542
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
38441460 tactacctccggtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatc 38441542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 4790247 - 4790330
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
4790247 atactacctccggtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatc 4790330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 33418392 - 33418458
Alignment:
169 atttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 33418458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 9575408 - 9575491
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||| ||| |||||| ||||||||| || | ||||||||||| || |||||| |||||||||||||||||||||||||    
9575408 atactccctctggtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatc 9575491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 40840243 - 40840175
Alignment:
159 ctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaacta 227  Q
    ||||||| ||||||| |||||||| |||  | ||||||| | |||||||||||||||||||||||||||    
40840243 ctccggtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaacta 40840175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 31319399 - 31319445
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||| |||||||||||||||||||||||| ||| | |||||||||||    
31319399 tactccctccggttctatttataagagaattttgggtcaacaaaagt 31319445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 9268889 - 9268840
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
9268889 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 9268840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 1565727 - 1565775
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| ||| |||||||||||||||||||| ||| | |||||||||||    
1565727 tatactcccttcggttctatttataagagaattttgggtcaacaaaagt 1565775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 19557185 - 19557100
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
19557185 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 19557100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 49823514 - 49823429
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
49823514 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 49823429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 4238593 - 4238676
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
4238593 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 4238676  T

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Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 22721930 - 22722013
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
22721930 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 22722013  T

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Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 38964391 - 38964474
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
38964391 atactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 38964474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 44785527 - 44785444
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44785527 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44785444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 10297979 - 10298061
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
10297979 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 10298061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 2787963 - 2787880
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
2787963 atactatctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 2787880  T

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Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 8437424 - 8437507
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
8437424 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatc 8437507  T

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Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 8817517 - 8817434
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
8817517 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 8817434  T

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Target: chr3; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 21295457 - 21295374
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
21295457 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatc 21295374  T

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Target: chr3; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 34080161 - 34080078
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
34080161 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatc 34080078  T

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Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 17653712 - 17653794
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
17653712 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 17653794  T

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Target: chr3; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 37508921 - 37509003
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
37508921 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 37509003  T

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Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 48340397 - 48340479
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
48340397 tactacctccggtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 48340479  T

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Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 51406673 - 51406755
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
51406673 tactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 51406755  T

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Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 36095812 - 36095728
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| |||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
36095812 tatactccctccggtcctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 36095728  T

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Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 46208028 - 46208112
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
46208028 tatactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 46208112  T

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Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 9111625 - 9111542
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
9111625 atactaccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatc 9111542  T

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Target: chr3; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 40691127 - 40691044
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| ||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
40691127 atactaactccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatc 40691044  T

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Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 42507486 - 42507403
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
42507486 atactacctccggtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatc 42507403  T

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Target: chr3; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 35513473 - 35513555
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| ||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
35513473 tactcccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 35513555  T

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Target: chr3; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 42170477 - 42170394
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||    
42170477 atactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatc 42170394  T

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Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 6013450 - 6013388
Alignment:
169 atttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
6013450 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagata 6013388  T

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Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 33943048 - 33942980
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||    
33943048 ctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatc 33942980  T

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Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 8952009 - 8951944
Alignment:
170 tttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| | |||||||    
8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaatacatc 8951944  T

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Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 37509053 - 37509005
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||||||||    
37509053 tatactacctccggtcctatttataagagaattttgggtcaacaaaagt 37509005  T

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Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 46208162 - 46208114
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||||| |||||||||||    
46208162 tatactccctccggtcctatttataagagaattttaggtcaacaaaagt 46208114  T

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Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 4238725 - 4238678
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||||||||||| ||||||||||||||| ||| | |||||||||||    
4238725 atactacctccggtcctatttataagagaatttttggtcaacaaaagt 4238678  T

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Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 17653843 - 17653796
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||||||||||| ||||||||||||||| ||| | |||||||||||    
17653843 atactacctccggtcctatttataagagaattttgggtcaacaaaagt 17653796  T

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Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 21295326 - 21295372
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||| |||||||| ||||||||||||||| ||||| |||||||||||    
21295326 tactccctccggtcctatttataagagaattttaggtcaacaaaagt 21295372  T

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Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 33128203 - 33128261
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatt 208  Q
    |||||||  |||| || ||| ||||||||||||||||| ||||||||||| ||||||||    
33128203 atatactctctccagtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

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Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Original strand, 44785396 - 44785442
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||| |||||||||||||||||||||||| ||| | |||||||||||    
44785396 tacttcctccggttctatttataagagaattttgggtcaacaaaagt 44785442  T

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Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 178
Target Start/End: Complemental strand, 29457991 - 29457963
Alignment:
150 atatactacctccggttctatttataaga 178  Q
    |||||||||||||||||||||||||||||    
29457991 atatactacctccggttctatttataaga 29457963  T

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Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 43323074 - 43323142
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||| ||| || | |||||||||||  ||||||||||| | |||||||||| | |||||||    
43323074 ctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatc 43323142  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 49823379 - 49823427
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
49823379 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 49823427  T

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Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 4684065 - 4683980
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
4684065 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 4683980  T

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Target: chr2; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 3055556 - 3055640
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
3055556 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 3055640  T

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Target: chr2; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 15896840 - 15896924
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
15896840 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 15896924  T

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Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 13344483 - 13344566
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
13344483 atactacctccggttctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatc 13344566  T

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Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 37990144 - 37990061
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
37990144 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 37990061  T

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Target: chr2; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 41478770 - 41478687
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
41478770 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 41478687  T

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Target: chr2; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 44397546 - 44397629
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44397546 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44397629  T

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Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 44398685 - 44398768
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44398685 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44398768  T

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Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 13197840 - 13197758
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
13197840 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 13197758  T

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Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 12338067 - 12337985
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
12338067 tactacctccggttctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatc 12337985  T

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Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 16044447 - 16044365
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
16044447 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatc 16044365  T

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Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 37666740 - 37666658
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
37666740 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatc 37666658  T

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Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 16243916 - 16243831
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||| ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
16243916 atatactatctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 16243831  T

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Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 38917653 - 38917570
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
38917653 atactacctccggtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatc 38917570  T

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Target: chr2; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 6648649 - 6648567
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
6648649 tactacctccggtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatc 6648567  T

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Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 9047886 - 9047803
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| |||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
9047886 atactatctccggtcatatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatc 9047803  T

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Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 15372225 - 15372308
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
15372225 atactccctccagtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatc 15372308  T

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Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 30099315 - 30099230
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| ||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||    
30099315 atattctacctccgatcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatc 30099230  T

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Target: chr2; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 41493012 - 41492944
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
41493012 ctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatc 41492944  T

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Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 12170529 - 12170447
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||| | ||||||| |||||||| |||| |||| |||||| ||||||||||||||||||||||||||| |||||||    
12170529 tactccctccgatcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatc 12170447  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 44804680 - 44804626
Alignment:
181 aatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||||| || |||||||||||||||||||||||||||||||||||||    
44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatc 44804626  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 233
Target Start/End: Original strand, 31150667 - 31150733
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagataca 233  Q
    |||||||||||||||| ||   |||||||||||  ||||||||||||| ||||||||||||||||||    
31150667 ctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 16734802 - 16734865
Alignment:
172 tataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||| || | |||||||||||  |||||| ||||||||||||||||| | |||||||    
16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatc 16734865  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 41453090 - 41453141
Alignment:
184 ttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||| |||||| ||||||||||||||||||||||||| | |||||||    
41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatc 41453141  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 41492895 - 41492942
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||| |||||||| ||||||||||||||||||| | |||||||||||    
41492895 atactccctccggtcctatttataagagaaatttgggtcaacaaaagt 41492942  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 4553125 - 4553059
Alignment:
168 tatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    ||||||||||||||| || | ||||||||| |  ||||||||||| |||||||||||  ||||||||    
4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaataagatacat 4553059  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 199
Target Start/End: Complemental strand, 44398820 - 44398770
Alignment:
149 gatatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
44398820 gatatactccctccggtcctatttataagagaattttgggtcaacaaaagt 44398770  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 13344616 - 13344568
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
13344616 tatactccctccggtcctatttataagagaattttggatcaacaaaagt 13344568  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 38917520 - 38917568
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
38917520 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 38917568  T

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Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 43199486 - 43199402
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
43199486 tatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 43199402  T

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Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 54743 - 54660
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
54743 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 54660  T

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Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 2890293 - 2890210
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
2890293 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 2890210  T

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Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 7785909 - 7785826
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
7785909 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 7785826  T

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Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 7805830 - 7805747
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
7805830 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 7805747  T

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Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 3304408 - 3304326
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
3304408 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 3304326  T

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Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 6552655 - 6552737
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
6552655 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 6552737  T

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Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 12343270 - 12343188
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
12343270 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 12343188  T

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Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 32114605 - 32114523
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
32114605 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 32114523  T

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Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 39571333 - 39571251
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
39571333 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 39571251  T

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Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 44498317 - 44498235
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
44498317 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 44498235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 234
Target Start/End: Complemental strand, 25601133 - 25601049
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
25601133 atatactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacat 25601049  T

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Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 12763785 - 12763702
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
12763785 atactacctccggtcttatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 12763702  T

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Target: chr8; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 32211494 - 32211411
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
32211494 atactacctccggtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatc 32211411  T

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Target: chr8; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 33289392 - 33289309
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
33289392 atactacctccggtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatc 33289309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 7012171 - 7012253
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
7012171 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatc 7012253  T

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Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 15888482 - 15888400
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
15888482 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatc 15888400  T

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Target: chr8; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 31654613 - 31654695
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
31654613 tactccctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 31654695  T

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Target: chr8; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 13578855 - 13578939
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||    
13578855 tatactacctccagttctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatc 13578939  T

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Target: chr8; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 4245712 - 4245649
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactg 215  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
4245712 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

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Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 8587170 - 8587252
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||||| |||||||||||||||| || | |||||||||||  |||||||| |||| ||||||||||||||||||||    
8587170 tactccctccggtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatc 8587252  T

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Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 28463614 - 28463689
Alignment:
156 tacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    |||||||||| |||||||||||||||| || | |||||||||||  |||||||||||||||||||| ||| |||||    
28463614 tacctccggtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaattttgaaccagata 28463689  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 25600997 - 25601054
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    ||||||| |||||||| ||||||||||||||| ||| | ||||||||||| |||||||    
25600997 atatactccctccggtcctatttataagagaattttgggtcaacaaaagttaatgtat 25601054  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 13246808 - 13246851
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttg 210  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||    
13246808 ctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 27422321 - 27422266
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    ||||| ||| |||| ||||||||||||||||||| | ||||||||| |||||||||    
27422321 atactcccttcggtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

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Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 2890159 - 2890208
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
2890159 atatactccctccggtcctatttataagagaattttgggtcaacaaaagt 2890208  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 17006916 - 17006993
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| | |||||||||||||||| || | |||||||||||  ||| || ||||||||||| ||||  |||||||||    
17006916 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatc 17006993  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 17570331 - 17570254
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| | |||||||||||||||| || | |||||||||||  ||| || ||||||||||| ||||  |||||||||    
17570331 cctccgatcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaatcagatacatc 17570254  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 234
Target Start/End: Original strand, 27422191 - 27422271
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    |||||| |||||||| |||||||||||| ||| ||   |||||||   |  |||||||||||||||||||||||| ||||||||    
27422191 tatacttcctccggtcctatttataagataaagttgagtcaacaa---ttcatgtatttggactgaatttttaaccagatacat 27422271  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 54610 - 54658
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
54610 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 54658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 11809114 - 11809158
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaa 197  Q
    |||| ||||||||||||||||||||||| |||||| |||| ||||    
11809114 tacttcctccggttctatttataagagatatttagatcaataaaa 11809158  T

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Target: scaffold0482 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 12859 - 12942
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
12859 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 12942  T

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Target: scaffold0204 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 23784 - 23867
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
23784 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 23867  T

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Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 37149086 - 37149003
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
37149086 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 37149003  T

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Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 9395350 - 9395432
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
9395350 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 9395432  T

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Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 582988 - 583071
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
582988 atactacctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatc 583071  T

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Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 20848073 - 20848156
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
20848073 atactacctccggtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatc 20848156  T

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Target: chr5; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 23359941 - 23360024
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
23359941 atactacctctggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 23360024  T

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Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 36563669 - 36563586
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
36563669 atactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 36563586  T

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Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 41989538 - 41989455
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
41989538 atactacctccggtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 41989455  T

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Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 11795168 - 11795250
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
11795168 tactacctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 11795250  T

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Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 13033050 - 13033133
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
13033050 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 13033133  T

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Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 13103023 - 13103106
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
13103023 atacttcctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 13103106  T

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Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 26350480 - 26350398
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||| |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
26350480 tactccctccgatcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 26350398  T

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Target: chr5; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 17025623 - 17025706
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||||||||||    
17025623 atactacctccggtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatc 17025706  T

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Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 37641952 - 37642036
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaa-gtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||| |||||||||||||||||||||||||||    
37641952 atactacctccggtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatc 37642036  T

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Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 4443959 - 4444042
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||    
4443959 atacttccttcggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatc 4444042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 38361822 - 38361743
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    ||||| |||||| | |||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
38361822 atacttcctccgatcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaaatagata 38361743  T

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Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 21575970 - 21576028
Alignment:
177 gagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatc 21576028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 6126845 - 6126906
Alignment:
174 taagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||    
6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatc 6126906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 13539986 - 13539915
Alignment:
160 tccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||| ||||||||||||||||||||| ||||||||    |||  |||| |||||||||||||||||||||||||    
13539986 tccggtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatc 13539915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 23360072 - 23360026
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||||||||| ||||||||||||||| ||| | |||||||||||    
23360072 tactacctccggtcctatttataagagaattttgggtcaacaaaagt 23360026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 966273 - 966224
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    ||||| || ||||||||||||||||||| | ||||||||| |||||||||    
966273 cctccagtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 21576079 - 21576030
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    ||||||| |||||||| ||||||||||||||| ||| | |||||||||||    
21576079 atatactccctccggtcctatttataagagaattttggatcaacaaaagt 21576030  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 199
Target Start/End: Complemental strand, 17025756 - 17025708
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||| |||||||| ||||||||||||||| ||| | |||||||||||    
17025756 tatactccctccggtcctatttataagagaattttgggtcaacaaaagt 17025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 35904448 - 35904480
Alignment:
202 atgtatttggactgaatttttaactagatacat 234  Q
    |||||||||||||||||||||||||| ||||||    
35904448 atgtatttggactgaatttttaactaaatacat 35904480  T

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Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 3372120 - 3372203
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
3372120 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 3372203  T

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Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 47833610 - 47833693
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
47833610 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 47833693  T

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Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 48336262 - 48336345
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
48336262 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 48336345  T

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Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 6122023 - 6121941
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
6122023 tactacctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 6121941  T

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Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 20538816 - 20538734
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
20538816 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 20538734  T

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Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 231
Target Start/End: Original strand, 46797725 - 46797803
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
46797725 tactacctccggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagata 46797803  T

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Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 53337370 - 53337452
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
53337370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 53337452  T

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Target: chr4; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 24704370 - 24704451
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacat 234  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
24704370 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacat 24704451  T

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Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 33551198 - 33551283
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
33551198 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatc 33551283  T

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Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 33621794 - 33621878
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
33621794 tatactactttcggttctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 33621878  T

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Target: chr4; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 3992975 - 3993058
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
3992975 atactacctccggtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 3993058  T

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Target: chr4; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 42797731 - 42797814
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
42797731 atactacctccggtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 42797814  T

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Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 7579307 - 7579392
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||    
7579307 atatactacctccggtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatc 7579392  T

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Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 150 - 231
Target Start/End: Original strand, 26231574 - 26231655
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||    
26231574 atatactacctccggtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagata 26231655  T

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Target: chr4; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 3904815 - 3904731
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
3904815 tatactacctccggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc 3904731  T

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Target: chr4; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 47838749 - 47838665
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
47838749 tatactacctccgatcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 47838665  T

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Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 43900548 - 43900631
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
43900548 atactccctccggtcctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatc 43900631  T

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Target: chr4; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 5986876 - 5986958
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||    
5986876 tactacctccgattctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc 5986958  T

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Target: chr4; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 52756675 - 52756757
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
52756675 tactatctccggtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatc 52756757  T

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Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 40913322 - 40913241
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagata 231  Q
    ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
40913322 atatactccctccggtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactggata 40913241  T

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Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 51894713 - 51894630
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
51894713 atactacctccggtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatc 51894630  T

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Target: chr4; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 41469897 - 41469814
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||| ||| |||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
41469897 atacttccttcggtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatc 41469814  T

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Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 235
Target Start/End: Original strand, 3422075 - 3422142
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
3422075 ctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatc 3422142  T

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Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 235
Target Start/End: Complemental strand, 41615792 - 41615724
Alignment:
167 ctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||| |||||||||||| |||||||    
41615792 ctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatc 41615724  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 25855080 - 25855165
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||| ||| |||||||| ||||||| ||   ||||||||||| ||||||||||||||||||||||||| | |||||||    
25855080 atatactccctcaggtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatc 25855165  T

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Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 17344219 - 17344284
Alignment:
159 ctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaa 224  Q
    |||||||||||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    
17344219 ctccggttctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaa 17344284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 29845663 - 29845719
Alignment:
171 ttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaacta 227  Q
    ||||||||||||||||| ||||||||| | ||| |||||| ||||||||||||||||    
29845663 ttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta 29845719  T

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Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 50430533 - 50430466
Alignment:
168 tatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||| || || | |||||||||||  ||||||||||| |||||||||||| |||||||||    
50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatc 50430466  T

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Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 4780425 - 4780371
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    |||| |||||||| ||||||||||||||||||| | ||||||||||| |||||||    
4780425 tactccctccggtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

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Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 17236912 - 17236845
Alignment:
159 ctccggttctatttataagagaaatttagttcaacaaaagtgaatgta-tttggactgaatttttaac 225  Q
    ||||||| |||||||||||| |||||| | |||||||||||  ||||| ||| |||||||||||||||    
17236912 ctccggtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaac 17236845  T

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Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 31013036 - 31013103
Alignment:
168 tatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||| ||| |||||| |||||||||||  ||||||||||  | |||| |||||||||||||||    
31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatc 31013103  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 7579440 - 7579394
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||| |||||||||||||||||||||||| ||| | |||||||||||    
7579440 tacttcctccggttctatttataagagaattttgggtcaacaaaagt 7579394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 199
Target Start/End: Complemental strand, 42797862 - 42797816
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||| |||||||| ||||||||||||||| ||||| |||||||||||    
42797862 tactccctccggtcctatttataagagaattttaggtcaacaaaagt 42797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 40913194 - 40913235
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagt 199  Q
    |||||||| ||||||||||||||||||| | |||||||||||    
40913194 cctccggtcctatttataagagaaatttggatcaacaaaagt 40913235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 21636248 - 21636196
Alignment:
158 cctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttg 210  Q
    ||||||||||||||||||||||| ||||   ||||||||| | ||||||||||    
21636248 cctccggttctatttataagagacatttgaatcaacaaaaattaatgtatttg 21636196  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 24704502 - 24704446
Alignment:
151 tatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtat 207  Q
    |||||| |||||| | ||||||||||||||| ||| | ||||||||||| |||||||    
24704502 tatactccctccgatcctatttataagagaattttgggtcaacaaaagttaatgtat 24704446  T

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Target: scaffold1707 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 1334 - 1417
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
1334 atactacatccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 1417  T

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Target: scaffold0009 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 49504 - 49587
Alignment:
152 atactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
49504 atactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc 49587  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 49635 - 49579
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtattt 209  Q
    |||| |||||||| ||||||||||||||| ||| | |||||||||||  ||||||||    
49635 tactccctccggtcctatttataagagaattttgggtcaacaaaagttgatgtattt 49579  T

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Target: scaffold0464 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 6261 - 6179
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
6261 tactacctccggtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatc 6179  T

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Target: scaffold0650 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 117 - 33
Alignment:
150 atatactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactagatacatc 235  Q
    ||||||| |||||||||||||||||| ||||||  | | |||||||||||  ||||||||||||| |||||||||| | |||||||    
117 atatactccctccggttctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatc 33  T

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Target: scaffold0415 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 13838 - 13782
Alignment:
171 ttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaacta 227  Q
    ||||||||||||||||| ||||||||| | ||| |||||| ||||||||||||||||    
13838 ttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaacta 13782  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 231433 - 231358
Alignment:
153 tactacctccggttctatttataagagaaatttagttcaacaaaagtgaatgtatttggactgaatttttaactag 228  Q
    |||| |||||| | ||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| ||||||    
231433 tactccctccgatcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaactag 231358  T

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