View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21146_high_1 (Length: 252)

Name: NF21146_high_1
Description: NF21146
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21146_high_1
NF21146_high_1
[»] chr8 (9 HSPs)
chr8 (17-252)||(12575300-12575535)
chr8 (48-249)||(14418478-14418677)
chr8 (121-252)||(41778847-41778977)
chr8 (117-252)||(13097030-13097170)
chr8 (122-250)||(44008307-44008428)
chr8 (118-217)||(41836294-41836394)
chr8 (17-133)||(9467312-9467429)
chr8 (17-154)||(39659712-39659852)
chr8 (17-133)||(453834-453951)
[»] chr4 (10 HSPs)
chr4 (17-252)||(2541894-2542128)
chr4 (17-252)||(26062690-26062929)
chr4 (17-193)||(12172041-12172218)
chr4 (17-252)||(647203-647439)
chr4 (17-252)||(650475-650711)
chr4 (122-220)||(26060653-26060752)
chr4 (118-217)||(11649305-11649405)
chr4 (16-133)||(15851421-15851538)
chr4 (117-162)||(24605105-24605149)
chr4 (17-133)||(33400075-33400192)
[»] chr7 (19 HSPs)
chr7 (14-252)||(3861904-3862142)
chr7 (117-252)||(23313361-23313496)
chr7 (17-246)||(23759609-23759838)
chr7 (17-252)||(11279501-11279736)
chr7 (23-252)||(36222315-36222544)
chr7 (23-252)||(294874-295100)
chr7 (116-250)||(23107999-23108133)
chr7 (40-250)||(33313006-33313216)
chr7 (17-252)||(6967157-6967393)
chr7 (25-252)||(46846320-46846548)
chr7 (48-252)||(24783418-24783624)
chr7 (17-252)||(17866353-17866589)
chr7 (48-252)||(36842967-36843173)
chr7 (117-162)||(22083300-22083345)
chr7 (16-127)||(17857879-17857991)
chr7 (17-130)||(3540924-3541037)
chr7 (48-252)||(9765811-9766016)
chr7 (140-252)||(17863220-17863330)
chr7 (17-133)||(6964534-6964651)
[»] chr5 (15 HSPs)
chr5 (23-252)||(11988868-11989101)
chr5 (25-250)||(33575101-33575326)
chr5 (17-245)||(15532200-15532429)
chr5 (23-245)||(15542388-15542611)
chr5 (16-252)||(22159754-22159993)
chr5 (48-252)||(14616459-14616664)
chr5 (48-252)||(7649972-7650177)
chr5 (17-252)||(34405858-34406094)
chr5 (17-121)||(26711464-26711567)
chr5 (17-121)||(26981201-26981304)
chr5 (117-162)||(17944837-17944882)
chr5 (17-133)||(2499762-2499879)
chr5 (17-133)||(21680605-21680721)
chr5 (17-133)||(1810190-1810307)
chr5 (17-133)||(33921343-33921459)
[»] chr1 (17 HSPs)
chr1 (18-252)||(1936636-1936873)
chr1 (117-252)||(34066354-34066489)
chr1 (48-252)||(16190209-16190413)
chr1 (17-252)||(10764929-10765165)
chr1 (17-252)||(13493272-13493508)
chr1 (48-252)||(13495997-13496202)
chr1 (51-252)||(39546252-39546453)
chr1 (117-217)||(8435280-8435380)
chr1 (117-207)||(23990235-23990325)
chr1 (17-154)||(49716595-49716735)
chr1 (48-171)||(15297419-15297542)
chr1 (92-252)||(27282183-27282343)
chr1 (17-90)||(50196715-50196789)
chr1 (162-252)||(32506000-32506090)
chr1 (17-154)||(34552438-34552578)
chr1 (31-133)||(49720100-49720203)
chr1 (27-107)||(18392666-18392747)
[»] chr2 (10 HSPs)
chr2 (16-252)||(36326936-36327172)
chr2 (48-252)||(23673375-23673580)
chr2 (17-245)||(31528406-31528635)
chr2 (17-236)||(13710097-13710315)
chr2 (38-250)||(31626561-31626773)
chr2 (17-249)||(40017992-40018224)
chr2 (48-252)||(16294908-16295113)
chr2 (51-250)||(32575718-32575920)
chr2 (117-162)||(30719991-30720036)
chr2 (48-133)||(29435996-29436082)
[»] chr6 (22 HSPs)
chr6 (48-252)||(15535066-15535270)
chr6 (18-252)||(19664667-19664901)
chr6 (17-246)||(13017189-13017419)
chr6 (117-252)||(16883685-16883820)
chr6 (48-252)||(15540580-15540784)
chr6 (48-252)||(32427311-32427514)
chr6 (17-252)||(14790628-14790864)
chr6 (25-250)||(22221736-22221959)
chr6 (25-250)||(22247571-22247794)
chr6 (17-252)||(14795656-14795892)
chr6 (121-252)||(20527266-20527399)
chr6 (117-217)||(11183937-11184037)
chr6 (137-246)||(30978332-30978441)
chr6 (48-252)||(27649112-27649316)
chr6 (117-162)||(28118049-28118094)
chr6 (48-127)||(1838610-1838690)
chr6 (197-252)||(1838483-1838539)
chr6 (117-162)||(9313643-9313687)
chr6 (184-252)||(32704422-32704490)
chr6 (17-153)||(11410988-11411127)
chr6 (117-252)||(12980594-12980728)
chr6 (117-252)||(12983481-12983615)
[»] chr3 (13 HSPs)
chr3 (17-246)||(22626312-22626540)
chr3 (17-246)||(11138570-11138798)
chr3 (17-248)||(39563510-39563742)
chr3 (48-154)||(46731562-46731669)
chr3 (17-171)||(20536333-20536490)
chr3 (74-175)||(35366462-35366562)
chr3 (117-217)||(50096825-50096925)
chr3 (196-252)||(46731504-46731560)
chr3 (184-250)||(13979498-13979564)
chr3 (17-133)||(19869226-19869343)
chr3 (16-154)||(27055096-27055237)
chr3 (48-132)||(13979616-13979700)
chr3 (65-133)||(25492146-25492214)
[»] scaffold0363 (1 HSPs)
scaffold0363 (48-249)||(41-240)
[»] scaffold0440 (1 HSPs)
scaffold0440 (25-250)||(9875-10101)
[»] scaffold0264 (1 HSPs)
scaffold0264 (25-250)||(24193-24416)
[»] scaffold0352 (2 HSPs)
scaffold0352 (48-194)||(2649-2796)
scaffold0352 (207-250)||(2794-2837)
[»] scaffold0766 (1 HSPs)
scaffold0766 (26-178)||(3590-3739)
[»] scaffold0134 (1 HSPs)
scaffold0134 (117-162)||(7453-7498)
[»] scaffold0567 (1 HSPs)
scaffold0567 (201-248)||(5995-6042)
[»] scaffold0273 (1 HSPs)
scaffold0273 (17-154)||(19509-19649)
[»] scaffold0068 (1 HSPs)
scaffold0068 (17-133)||(33730-33846)


Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 12575300 - 12575535
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||||||    
T  12575300 tgataaatatttggcaagtgtaccaaattcaatcgaagtaataaataattcgtatccacgaggactgttgttaacttctactcaacaagttcattattaa 12575399  T
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  12575400 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattaaaaacaataaaagattggttttagaaaattagag 12575499  T
Q  217 agaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||| ||| |||||||||||||||||    
T  12575500 agaagtatggttaagaccattgaatcctccgaagtt 12575535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 249
Target Start/End: Complemental strand, 14418677 - 14418478
Alignment:
Q  48 atcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggt-gcccta 146  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| | | | ||||| ||| |||| ||||||||| | |||||||||||||| ||||||    
T  14418677 atcgaagtagtaaataattcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaaaaaggatatgttaaattcaatggttgcccta 14418579  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatcctc 245  Q
    ||||||||||||| |||||  ||||||||   |||| |||||||||||  ||||||||| ||| ||||||||||||||||||||| || || ||||||||    
T  14418578 ggcagttgagttggttttt--aacataaacaaattaaaaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacattcgaatcctc 14418482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 41778847 - 41778977
Alignment:
Q  121 gatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaa 220  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||   |||| ||||||||||| ||| | ||||||| |||| ||||||    
T  41778847 gatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagatt-gatttagaagattaaagagaa 41778945  T
Q  221 gtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||| |||||  |||| |||||||||    
T  41778946 gtatggttaagaccttcaaatcttccgaagtt 41778977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 13097170 - 13097030
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaat-tgattacaaa----caataaaatattggttttagaaaat 211  Q
    ||||||||||||||||||||||||| |||| | |||||| ||| ||| |||||||||||  |||| | |||    |||||||| ||| ||||||||||||    
T  13097170 aaaggatgtattaaattcaatggtggcctatggagttgaattggtttgtgtaacataaaagtgataataaaaaaacaataaaagattagttttagaaaat 13097071  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||||||||||    
T  13097070 tagagagaagtatggttaagaccttcgaatcctccgaagtt 13097030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 250
Target Start/End: Complemental strand, 44008428 - 44008307
Alignment:
Q  122 atgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaag 221  Q
    |||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||  ||||| || ||       |||||||||||||||||||| ||||     
T  44008428 atgtattaaattcaatggtgccctagacagttgatttgatttatgtaacaaaaaaggattaaaagca-------attggttttagaaaattagaaagaat 44008336  T
Q  222 tatggttaaaacctttgaatcctccgaag 250  Q
    ||||||||  ||||| |||||||||||||    
T  44008335 tatggttatgaccttcgaatcctccgaag 44008307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 41836294 - 41836394
Alignment:
Q  118 aaggatgtattaaattcaatggtg--ccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||   | || |||||||||||  |||||||||||||||| ||    
T  41836294 aaggatgtataaaattcaatggtgtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaa-gttggttttagaaaatttga 41836392  T
Q  216 ga 217  Q
    ||    
T  41836393 ga 41836394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 9467429 - 9467312
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||  | ||||||||| |||  |    
T  9467429 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttcttcttagcaagttcgttaaaa 9467330  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  9467329 taaaggatgtagtaaatt 9467312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 39659712 - 39659852
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||| ||  | ||||||||| |||  || ||||||||||||||||||  |||||| ||||| | ||||||||| |||  |    
T  39659712 tgatagatatttggcaagtgtaccgaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccattgttaatttctacttagcaagttcgttaaaa 39659810  T
Q  116 aaaaggatgtattaaattcaatgg---tgccctaggcagttg 154  Q
     |||||||||| ||||||  ||||   |||||||||||||||    
T  39659811 taaaggatgtagtaaattttatggggttgccctaggcagttg 39659852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 453951 - 453834
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| ||||||| |||| ||||||||  | || |||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  453951 tgatagatatttgacaagtgtaccaaaaactatggaagtactaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 453852  T
Q  116 aaaaggatgtattaaatt 133  Q
     ||||||| || ||||||    
T  453851 taaaggatttagtaaatt 453834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 134; Significance: 7e-70; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 2542128 - 2541894
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |   |||||||||| | ||||| |||||||||||    
T  2542128 tgatagatatttggcaagtgtaccaaagtcaatcgaagtaataaataattcgtatccacgaggactgtatttaacttctactgagcaatttcattattaa 2542029  T
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattgg-ttttagaaaattaga 215  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||  ||||| |||||||||||||| || |||| |||||||| |    
T  2542028 aaaggatgtattaaattcaatggtgccctaggcagttgagtttattcttgtaacataaacggattaaaaacaataaaatataggttttttgaaaattaaa 2541929  T
Q  216 gagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||  |||||||||| ||||| |||||||| ||||||    
T  2541928 gag--gtatggttaagaccttcgaatcctctgaagtt 2541894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 26062690 - 26062929
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggacc--gatgttaacttctattcagcaagttcattat 113  Q
    ||||||| |||||||||| | ||||||  | |||||| |||||||||| ||||||||||||||||||  | |||||||||||| ||| ||| ||| ||||    
T  26062690 tgataaagatttggcaagtgaaccaaaa-ctatcgaaataataaataaattcgtatccacgaggaccccgttgttaacttctactcaacaatttctttat 26062788  T
Q  114 taaaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaatt- 212  Q
     |||||||||||||||||||||| | ||||||||| |||||  ||| | ||||||| |||||  ||||| |||||||||||  ||||||||||||||||     
T  26062789 caaaaaggatgtattaaattcaaggttgccctaggtagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaatta 26062888  T
Q  213 -agagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
     ||||||| |||||||||| |||||||||||||||||||||    
T  26062889 gagagagatgtatggttaagacctttgaatcctccgaagtt 26062929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 12172218 - 12172041
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||| ||  |||| ||||||||||| |   |||||||||| | ||||| ||||||||||    
T  12172218 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaagatcgtttccacgaggactgtatttaacttctacttagcaatttcattatta 12172119  T
Q  116 aaaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaa 193  Q
    |||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||    
T  12172118 aaaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaa 12172041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 647203 - 647439
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||||||||||||||| ||||||||  | ||||||||| |||  || || |||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  647203 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 647302  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||| ||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  647303 aaaaggatgtataaatttatattgattgccctaggcatttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 647398  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| | ||| |||||||| ||||||    
T  647399 tagagagaagtatggttaagatcttcgaatcctctgaagtt 647439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 650475 - 650711
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||||||||||||||| ||||||||  | ||||||||| |||  || || |||||||||||||||| |||||| ||||| || |||| |||  ||| |    
T  650475 tgataaatatttggcaagtgtaccaaaagctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctactcggcaatttctatatca 650574  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||| ||||||||  ||||||||||||||  | | || |||||||||||  |||||||| | || ||    
T  650575 aaaaggatgtataaatttatattgattgccctaggcatttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcataatat 650670  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  650671 tagagagaagtatggttaagaccttcgaatcctctgaagtt 650711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 26060752 - 26060653
Alignment:
Q  122 atgtattaaattcaatggtg--ccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagaga 219  Q
    |||||| |||||||||||||  |||||||||| ||||||||||||||||| ||||||  | || |||||||||||  |||||||||||||||| ||||||    
T  26060752 atgtataaaattcaatggtgtgccctaggcaggtgagttgatttttgtaatataaatgaaataaaaacaataaaa-gttggttttagaaaatttgagaga 26060654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 11649305 - 11649405
Alignment:
Q  118 aaggatgtattaaattcaatggtg--ccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    |||||||||| |||||||||||||  ||||||||||||||||||| |||||||| |||||   | || |||||||||||  |||||||||||||||| ||    
T  11649305 aaggatgtataaaattcaatggtgtgccctaggcagttgagttgacttttgtaatataaacgaaataaaaacaataaaa-gttggttttagaaaatttga 11649403  T
Q  216 ga 217  Q
    ||    
T  11649404 ga 11649405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 15851538 - 15851421
Alignment:
Q  16 atgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatt 114  Q
    |||||||| |||||||||| ||||||||  | ||||||||||||   || ||||||||||||||||||| |||||| ||||| | ||||||||| |||      
T  15851538 atgataaagatttggcaagtgtaccaaaa-ctatcgaagtaatagtaaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaa 15851440  T
Q  115 aaaaaggatgtattaaatt 133  Q
    | |||||||||| ||||||    
T  15851439 ataaaggatgtagtaaatt 15851421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 24605105 - 24605149
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  24605105 aaaggatgtattaaattcaatggtg-cctaggcagttgagttgatt 24605149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 33400075 - 33400192
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||| ||| |||  || |||||||||||||| |||| |||||| ||||  | ||||||||| |||  |    
T  33400075 tgatagatatttggcaagtgtaccaaaagctatcgaggtagtaataaagttcgtatccacgagaaccgttgttaatttctgcttagcaagttcgttaaaa 33400174  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  33400175 taaaggatgtaataaatt 33400192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 252
Target Start/End: Original strand, 3861904 - 3862142
Alignment:
Q  14 atatgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattat 113  Q
    |||||||| |||||||||||| |||| | | |||||||||||||||||||||| |||||||||||||  | | |||||||||| | ||||| ||||||||    
T  3861904 atatgatagatatttggcaagtgtactagagtcaatcgaagtaataaataatttgtatccacgaggattgttattaacttctacttagcaatttcattat 3862003  T
Q  114 taaaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttt-tgtaacataaattgattacaaacaataaaatattggttttagaaaatt 212  Q
    ||||| ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  3862004 taaaa-ggatgtattaaattcaatgatgccctaggcagttcaattgattttttgtaacataaactgattaaaaacaataaaagattggttttataaaatt 3862102  T
Q  213 agagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||| |||| ||||| ||||||| |||||||    
T  3862103 agagagaagtatgattaagaccttcgaatccttcgaagtt 3862142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 23313361 - 23313496
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||   |||| ||||||||||| | |||||||||||||||||||    
T  23313361 aaaggatgtattaaattcaagggtgccctaggtagttgaattgatttttgtaacataaacgaattaaaaacaataaaagaatggttttagaaaattagag 23313460  T
Q  217 agaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||| |||||||||||||||||||||    
T  23313461 agaagtatggttaagacctttgaatcctccgaagtt 23313496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 23759609 - 23759838
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | |||||||||||||||||||||||| | ||||| || |||||||| |   |||||||||| | ||||| |||||| ||||    
T  23759609 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaaaagttcgtttctacgaggactgtatttaacttctacttagcaaattcatt-ttaa 23759707  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaatta 213  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  |||||| |     
T  23759708 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaa-tc 23759805  T
Q  214 gagagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||||||  |||| |||||||||    
T  23759806 gagagaagtatggttaagtccttcgaatcctcc 23759838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 11279736 - 11279501
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    |||| ||||||||||||| | |||||||||||||||||||||||| |||| || ||||| |||||     |||| ||||| | ||||| |||||||||||    
T  11279736 tgatgaatatttggcaagtgaaccaaattcaatcgaagtaataaa-aatttgtttccacaaggactatatttaatttctacttagcaatttcattattaa 11279638  T
Q  117 aaaggatgtattaaatt--caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattgg-ttttagaaaatta 213  Q
    ||||||||||| |||||   | |||||||||||||||||||||||| |||||||||||||| |||||| |||| |  ||| ||||| |||||||| |||     
T  11279637 aaaggatgtataaaatttatattggtgccctaggcagttgagttga-ttttgtaacataaactgattaaaaacgaataaagattggtttttagaagatt- 11279540  T
Q  214 gagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||||||  |||| ||||| | |||||||    
T  11279539 gagagaagtatggttaagtccttcgaatctttcgaagtt 11279501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 36222315 - 36222544
Alignment:
Q  23 atatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaagga 122  Q
    |||||||||||  | |||||||||||| ||||||||||| |||||||  |||||||||  |   |||| |||||   ||||| |||||||||||||||||    
T  36222315 atatttggcaaatgaaccaaattcaattgaagtaataaa-aattcgttaccacgaggattgtatttaatttctacgtagcaatttcattattaaaaagga 36222413  T
Q  123 tgtattaaattcaa--tggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattgg-ttttagaaaattagagaga 219  Q
    ||||| ||||| |   |||||||||||||||||||||||| |||| ||||||||| |||||| ||||||  ||| ||||| |||||||| ||| ||||||    
T  36222414 tgtataaaatttatattggtgccctaggcagttgagttga-ttttctaacataaactgattaaaaacaaagaaagattggtttttagaagatt-gagaga 36222511  T
Q  220 agtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||  |||| |||||||||||||||    
T  36222512 agtatggttaagtccttcgaatcctccgaagtt 36222544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 295100 - 294874
Alignment:
Q  23 atatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaagga 122  Q
    |||||||||||| | |||||||||||||||||||||||| |||| || ||||||||||| |   |||||||||| | ||||| |||||||||||||||||    
T  295100 atatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgtgtccacgaggactgtatttaacttctacttagcaatttcattattaaaaagga 295001  T
Q  123 tgtattaaatt--caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaa 220  Q
    |||| ||||||   | || ||||| |||||||  |||||  |||||||||||||  || ||| || |||  ||  ||||||||||||||||| |||||||    
T  295000 tgtaataaatttatattgatgcccgaggcagt--agttg--ttttgtaacataagctggttaaaagcaaataaggattggttttagaaaatt-gagagaa 294906  T
Q  221 gtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||  | || |||||||||||||||    
T  294905 gtatggttaagtctttcgaatcctccgaagtt 294874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 116 - 250
Target Start/End: Complemental strand, 23108133 - 23107999
Alignment:
Q  116 aaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    ||||||||||||| ||||||| | || ||||| ||||||||||||| |||||||||||||   |||| ||||||||||| ||||||||||||||||||||    
T  23108133 aaaaggatgtatttaattcaaggatgtcctagacagttgagttgatgtttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattaga 23108034  T
Q  216 gagaagtatggttaaaacctttgaatcctccgaag 250  Q
    ||||| | ||||||| ||||| ||||| |||||||    
T  23108033 gagaaatgtggttaagaccttcgaatcatccgaag 23107999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 250
Target Start/End: Complemental strand, 33313216 - 33313006
Alignment:
Q  40 caaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa--t 137  Q
    |||||||||||||||||||||| ||||||| || |||||||| | | |||||||||| | ||||| |||||||||||||||||||| | ||||| |   |    
T  33313216 caaattcaatcgaagtaataaa-aattcgtttctacgaggactg-tattaacttctacttagcaatttcattattaaaaaggatgtgtaaaatttatatt 33313119  T
Q  138 ggtgccctaggcagttgagttgatttttgtaacataaattg-attacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctt 236  Q
    ||||||||||||||||||||||| ||||||||||||||  | |||| ||| ||||||  ||||||||||||||||  |||||||  ||||||||  ||||    
T  33313118 ggtgccctaggcagttgagttga-ttttgtaacataaacggaattaaaaataataaaggattggttttagaaaatctgagagaaaaatggttaagtcctt 33313020  T
Q  237 tgaatcctccgaag 250  Q
     |||||||| ||||    
T  33313019 cgaatcctctgaag 33313006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 6967393 - 6967157
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  6967393 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 6967294  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  6967293 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 6967198  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  6967197 tagagagaagtatggttaagaccttcgaatcctctgaagtt 6967157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 252
Target Start/End: Original strand, 46846320 - 46846548
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatg 124  Q
    |||||||||| | | || ||||||||||||||||||| |||  || ||||||||||| |   |||| ||||| | ||||| |||||||||||||||||||    
T  46846320 atttggcaagtgaatcagattcaatcgaagtaataaa-aatatgtttccacgaggactgtatttaatttctacttagcaatttcattattaaaaaggatg 46846418  T
Q  125 tattaaatt--caatggtgccctaggcagttgagttgatttttgtaacataaattga-ttacaaacaataaaatattgg-ttttagaaaattagagagaa 220  Q
    ||| |||||   | |||||||||||||||||||||||| || | ||  ||||| ||| | | ||||||||||| ||||| |||||||||||| |||||||    
T  46846419 tataaaatttatattggtgccctaggcagttgagttgaattct-tattataaactgactaaaaaacaataaaagattggtttttagaaaatt-gagagaa 46846516  T
Q  221 gtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||  |||| |||||||||||||||    
T  46846517 gtatggttaagtccttcgaatcctccgaagtt 46846548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 24783624 - 24783418
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcatt-attaaaaaggatgtattaaattcaatgg--tgcc 143  Q
    ||||||||||||||||| || |||||||||||||||| |||||| ||||| || |||| ||| || || ||||||||||||| || ||  || |  || |    
T  24783624 atcgaagtaataaataaatttgtatccacgaggaccgttgttaatttctactcggcaatttcttttatcaaaaaggatgtataaatttatattgattgtc 24783525  T
Q  144 ctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaat 241  Q
    | ||||||||||||||  |||||||||||||| || | || |||||||||||  ||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  24783524 caaggcagttgagttg--ttttgtaacataaacttaaata-aaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacctttgaat 24783429  T
Q  242 cctccgaagtt 252  Q
    |||||||||||    
T  24783428 cctccgaagtt 24783418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 17866353 - 17866589
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  17866353 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 17866452  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||| ||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  17866453 aaaaggatgtataaatttatattgattgccctaggcagttgagctg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 17866548  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||| | ||||| |||||||| ||||||    
T  17866549 tagagagaagtatggtttagaccttcgaatcctctgaagtt 17866589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 36842967 - 36843173
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatgg--tgccc 144  Q
    |||||||||||||||||  ||| |||||| ||||||| |||||| ||||| ||||||| ||| ||||  ||| ||||||||||||||||||||  |||||    
T  36842967 atcgaagtaataaataagatcgaatccacaaggaccgttgttaatttctactcagcaatttcgttatcgaaa-ggatgtattaaattcaatggtttgccc 36843065  T
Q  145 taggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatc 242  Q
    ||||||||||  ||| ||||| |||  ||||  | | || |||||||||||  ||||||||| ||| ||||||||||||||||||||| ||||| |||||    
T  36843066 taggcagttggattggtttttataaagtaaacgtaaata-aaacaataaaa-gttggttttatgaatattagagagaagtatggttaagaccttcgaatc 36843163  T
Q  243 ctccgaagtt 252  Q
    ||||||||||    
T  36843164 ctccgaagtt 36843173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 22083300 - 22083345
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  22083300 aaaggatatattaaattcaatggtgccctaggcagttgagttgatt 22083345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 17857879 - 17857991
Alignment:
Q  16 atgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatt 114  Q
    |||||| |||||||||||| ||||||||  | |||||| || |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| ||||     
T  17857879 atgatagatatttggcaagtgtaccaaaagctatcgaaatagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatc 17857978  T
Q  115 aaaaaggatgtat 127  Q
    |||||||||||||    
T  17857979 aaaaaggatgtat 17857991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 3540924 - 3541037
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||||||||||||||| ||||||||  | ||| ||||| |||  || ||||||||||||||||||| ||| |||||||| | ||||||||| |||  |    
T  3540924 tgataaatatttggcaagtgtaccaaaa-ctatcaaagtagtaataaagttcgtatccacgaggaccgttgtgaacttctacttagcaagttcgttaaaa 3541022  T
Q  116 aaaaggatgtattaa 130  Q
     ||||||||||||||    
T  3541023 taaaggatgtattaa 3541037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 9766016 - 9765811
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    |||||||||||||||||  ||| |||||  ||| ||| |||||| ||||| ||||||  ||| ||||  ||||||||||||||||||    | |||||||    
T  9766016 atcgaagtaataaataagatcgaatccataagggccgttgttaatttctactcagcattttctttatcgaaaaggatgtattaaatttctggttgcccta 9765917  T
Q  147 ggcagttgagttgatttttgtaacataaat-tgattacaaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatcct 244  Q
    ||||||||  ||| ||||| |||  ||||  | | || ||| |||||||  ||||||||| ||| ||||||||||||||||||||| ||||| |||||||    
T  9765916 ggcagttggattggtttttataaagtaaacataaata-aaataataaaag-ttggttttaagaatattagagagaagtatggttaagaccttcgaatcct 9765819  T
Q  245 ccgaagtt 252  Q
    | ||||||    
T  9765818 ctgaagtt 9765811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 252
Target Start/End: Original strand, 17863220 - 17863330
Alignment:
Q  140 tgccctaggcagttgagttgatttttgtaacataaat-tgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaaccttt 237  Q
    ||||||||||||||||| ||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||||||||||||||||||||| |||||     
T  17863220 tgccctaggcagttgagctg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatattagagagaagtatggttaagaccttc 17863315  T
Q  238 gaatcctccgaagtt 252  Q
    |||||||| ||||||    
T  17863316 gaatcctctgaagtt 17863330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 6964651 - 6964534
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||| ||||||| ||| ||||||||  | ||||||||| |||  || ||||||||||||||| ||| |||||| ||||| | ||||||||| |||  |    
T  6964651 tgataattatttggtaagtgtaccaaaaactatcgaagtagtaatgaagttcgtatccacgagggccgttgttaatttctacttagcaagttcgttaaaa 6964552  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  6964551 taaaggatgtagtaaatt 6964534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 252
Target Start/End: Original strand, 11988868 - 11989101
Alignment:
Q  23 atatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattc--agcaagttcattattaaaaag 120  Q
    ||||||| |||| | | |||||||||||||||||||||||||||||| |||||||| |||| | ||||||||||| |  ||||| ||||||| ||| |||    
T  11988868 atatttgacaagtgaatcaaattcaatcgaagtaataaataattcgtttccacgagaaccgttcttaacttctatacttagcaatttcattagtaataag 11988967  T
Q  121 gatgtat--taaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagag 218  Q
    || ||||  ||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||| |||||| |||| ||||||||||||||||||    
T  11988968 gacgtatattaaattcaatggtcccctaggcagttgagttgatttttgtaacataaacagattaaaaacgataaaagattgattttagaaaattagagag 11989067  T
Q  219 aagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||| |||||| ||||| ||||||||| |||||    
T  11989068 aagtaaggttaagaccttcgaatcctccaaagtt 11989101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 33575326 - 33575101
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatg 124  Q
    |||||||||| | |||||||||||||||||||||||| ||||||| | ||||||||| |   |||||||||||| ||||| || ||||||||||||||||    
T  33575326 atttggcaagtgaaccaaattcaatcgaagtaataaaaaattcgttttcacgaggactgtatttaacttctatttagcaattttattattaaaaaggatg 33575227  T
Q  125 tattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattgg-ttttagaaaattagagagaagt 222  Q
    ||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  ||||| |||||||||||| |||||||||    
T  33575226 tataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttagaaaatt-gagagaagt 33575129  T
Q  223 atggttaaaacctttgaatcctccgaag 250  Q
    ||||||||  |||| |||||||||||||    
T  33575128 atggttaagtccttcgaatcctccgaag 33575101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 245
Target Start/End: Original strand, 15532200 - 15532429
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||| | | ||||||||| |||||||||||||| ||||||| ||||||||||| |   |||||||||| | ||||| |||||||||||    
T  15532200 tgatagatatttggcatgtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 15532299  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaatta 213  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  ||||||||     
T  15532300 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 15532397  T
Q  214 gagagaagtatggttaaaacctttgaatcctc 245  Q
    |||||||||||||||||  |||| ||||||||    
T  15532398 gagagaagtatggttaagtccttcgaatcctc 15532429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 15542388 - 15542611
Alignment:
Q  23 atatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaagga 122  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||| ||||||||||| |   |||||||||| | | ||| |||||||||||||||||    
T  15542388 atatttggcaagtgaaccaaattcgatcgaagtaataaaaaattcgtttccacgaggactgtatttaacttctacttaacaatttcattattaaaaagga 15542487  T
Q  123 tgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaattagagaga 219  Q
    ||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  |||||||| ||||||    
T  15542488 tgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagaga 15542585  T
Q  220 agtatggttaaaacctttgaatcctc 245  Q
    |||||||||||  |||| ||||||||    
T  15542586 agtatggttaagtccttcgaatcctc 15542611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 22159993 - 22159754
Alignment:
Q  16 atgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||| ||||||| |||| ||||||||||| |||||||||||||| |||| || ||||||||||| |   |||||||||| | ||||| ||| || | |    
T  22159993 atgatagatatttgacaagtgtaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttctttgtca 22159894  T
Q  116 aaaaggatg--tattaaattcaatgg-tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaa 210  Q
    |||||||||  |||||||||||| || |||||||||||||||  ||| ||||| |||  ||||  | | || ||||||||||| ||||||||| |||| |    
T  22159893 aaaaggatgtatattaaattcaaaggttgccctaggcagttggattggtttttataaagtaaacgtaaata-aaacaataaaa-attggttttaagaata 22159796  T
Q  211 ttagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||| ||||||||| |||||||||||||||||||||    
T  22159795 ttagagagaaatatggttaagacctttgaatcctccgaagtt 22159754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 14616459 - 14616664
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatgg--tgccc 144  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||| || |||| ||| |||| ||||||||||||| || ||  || |  | |||    
T  14616459 atcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggatgtatgaatttatattgattaccc 14616558  T
Q  145 taggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatc 242  Q
    |||| ||||||||||  ||||||||||||||  | | || |||||||||||  ||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  14616559 taggaagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttgattttaagaatattagagagaagtatggttaagacctttgaatc 14616654  T
Q  243 ctccgaagtt 252  Q
    ||||||||||    
T  14616655 ctccgaagtt 14616664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 7649972 - 7650177
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatgg--tgccc 144  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||| ||||| ||| ||| ||| |||| ||||||||||||| || ||  || |  |||||    
T  7649972 atcgaagtaataaataaattcgtattcacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggatgtataaatttatattgattgccc 7650071  T
Q  145 taggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatc 242  Q
    |||||||||||||||  ||||||||||||||  | | || |||||||||||  ||| |||| |||| ||||||||||||||||||||| || ||||||||    
T  7650072 taggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttgcttttaagaatattagagagaagtatggttaagacatttgaatc 7650167  T
Q  243 ctccgaagtt 252  Q
    || |||||||    
T  7650168 ctacgaagtt 7650177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 34406094 - 34405858
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||| ||||||| |||||| ||||| || |||| ||| |||| |    
T  34406094 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacaaggaccgttgttaatttctactcggcaatttctttatca 34405995  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  || |||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  34405994 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttgtgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 34405899  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| |||||  ||||||| ||||||    
T  34405898 tagagagaagtatggttaagaccttcaaatcctctgaagtt 34405858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 26711464 - 26711567
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||| ||||||| ||||||||||| | | |||||||||| | ||||| |||||||| ||    
T  26711464 tgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactg-tattaacttctacttagcaatttcattatcaa 26711562  T
Q  117 aaagg 121  Q
    |||||    
T  26711563 aaagg 26711567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 26981201 - 26981304
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | |||||||||||| ||||||||||| ||||||| ||||||||||| | | |||||||||| | ||||| |||||||| ||    
T  26981201 tgatagatatttggcaagtgaaccaaattcaattgaagtaataaaaaattcgtttccacgaggactg-tattaacttctacttagcaatttcattatcaa 26981299  T
Q  117 aaagg 121  Q
    |||||    
T  26981300 aaagg 26981304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 17944882 - 17944837
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  17944882 aaaggatatattaaattcaatggtgccctaggcagttgagttgatt 17944837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 2499762 - 2499879
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||    ||||||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  2499762 tgatagatatttggcaagtgtaccaaaagatatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 2499861  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  2499862 taaaggatgtagtaaatt 2499879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 21680721 - 21680605
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || || |||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  21680721 tgatagatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 21680623  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  21680622 taaaggatgtactaaatt 21680605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 1810190 - 1810307
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||| |||||| |||| ||||||||  | ||||||||| |||  || ||||||| ||||||||||| |||||| ||||| | | ||||||| |||  |    
T  1810190 tgataactatttgacaagtgtaccaaaagctatcgaagtagtaataaagttcgtattcacgaggaccgttgttaatttctacttaacaagttcgttaaaa 1810289  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  1810290 taaaggatgtagtaaatt 1810307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 33921459 - 33921343
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| ||||| |||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| ||| || ||||| | ||||||||| |||  |    
T  33921459 tgatagatattcggcaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgtgaatttctacttagcaagttcgttaaaa 33921361  T
Q  116 aaaaggatgtattaaatt 133  Q
      ||||||||||||||||    
T  33921360 ttaaggatgtattaaatt 33921343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 18 - 252
Target Start/End: Complemental strand, 1936873 - 1936636
Alignment:
Q  18 gataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaa 117  Q
    |||| |||||||||||| | ||||||||||||||||||||| |||||||| | ||||| | ||||  |||||||||||| |  |||| ||||||| |||     
T  1936873 gatagatatttggcaagtgaaccaaattcaatcgaagtaatgaataattcatttccacaatgaccattgttaacttctacttggcaatttcattagtaat 1936774  T
Q  118 aaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaattg-attacaaacaataaaatattggttttagaaaattag 214  Q
    || |||||||||||||||||||  || |||||||||||||||||||| ||||| |||||| || |||| ||||  |||||| ||||||||||||||||||    
T  1936773 aacgatgtattaaattcaatgggttgacctaggcagttgagttgattgttgtatcataaactgaattaaaaacggtaaaattttggttttagaaaattag 1936674  T
Q  215 agagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  1936673 agagaagtatggttaagaccttcgaatcctccgaagtt 1936636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 34066489 - 34066354
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||   |||| ||||||||||| |||||||||||||||||||||    
T  34066489 aaaggatgtattaaattcaagggtgccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 34066390  T
Q  217 agaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||| ||||| |||||||||||||||    
T  34066389 agaagtatggttaagaccttcgaatcctccgaagtt 34066354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 16190209 - 16190413
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||||||||| ||||||||||||||||| | |||||| || |||||  |||   | |||  | ||||||||||||||||||||||||||||||    
T  16190209 atcgaagtaataaataaattcgtatccacgaggactgttgttaatttttattcgacaaaaacgttaaaataaaggatgtattaaattcaatggtgcccta 16190308  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctttgaatcctcc 246  Q
    || | |||||||||| |||||||||||||   |||| ||||||| ||| |||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  16190309 ggaaattgagttgatgtttgtaacataaacgaattaaaaacaat-aaagattggttttagaaaattaaagagaagtatggttaagaccttcgaatcctcc 16190407  T
Q  247 gaagtt 252  Q
    ||||||    
T  16190408 gaagtt 16190413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 10765165 - 10764929
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  10765165 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 10765066  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  10765065 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 10764970  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  10764969 tagagagaagtatggttaagaccttcgaatcctctgaagtt 10764929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 13493508 - 13493272
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  13493508 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 13493409  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  13493408 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 13493313  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  13493312 tagagagaagtatggttaagaccttcgaatcctctgaagtt 13493272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 13496202 - 13495997
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatgg--tgccc 144  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||| || |||| ||| |||| ||||||||||||| || ||  || |  || ||    
T  13496202 atcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcggcaatttctttatcaaaaaggatgtataaatttatattgattgtcc 13496103  T
Q  145 taggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatc 242  Q
    ||||||||||| |||  ||||||||||||||  | | || |||||||||||  ||| |||| |||| ||||||||||||||||||||| |||||||||||    
T  13496102 taggcagttgaattg--ttttgtaacataaacgtaaata-aaacaataaaa-gttgattttaagaatattagagagaagtatggttaagacctttgaatc 13496007  T
Q  243 ctccgaagtt 252  Q
    ||||||||||    
T  13496006 ctccgaagtt 13495997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 252
Target Start/End: Complemental strand, 39546453 - 39546252
Alignment:
Q  51 gaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa-tggtgccctagg 148  Q
    ||||||||||||||  ||||||| |||||||||  ||||||||| || ||||||| ||||||||  ||| ||||||||||||||||| || |||||||||    
T  39546453 gaagtaataaataagatcgtatc-acgaggaccattgttaacttttactcagcaatttcattatcgaaa-ggatgtattaaattcaattgttgccctagg 39546356  T
Q  149 cagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaa-attagagagaagtatggttaaaacctttgaatcctccg 247  Q
    ||||||  ||| |||||||||| ||||   |    |||||||||||  ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||    
T  39546355 cagttggattggtttttgtaacgtaaacgcaaataaaacaataaaa-gttggttttaaaaatattagagagaagtatggttaagaccttcgaatcctccg 39546257  T
Q  248 aagtt 252  Q
    |||||    
T  39546256 aagtt 39546252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 8435380 - 8435280
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||   | || |||||||||||  | | ||||||||||||||||    
T  8435380 aaaggatgtattaaattcaagagtgccctaggcagttgagttgatttttgtaacataaacataataaaaacaataaaagttggtttttagaaaattagag 8435281  T
Q  217 a 217  Q
    |    
T  8435280 a 8435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 23990235 - 23990325
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttaga 207  Q
    ||||||||||||||||||| |  ||| ||||||||||||||| |||||||||||||| |  ||||| ||||||||||| || |||||||||    
T  23990235 aaaggatgtattaaattcagtaatgctctaggcagttgagttaatttttgtaacatatacggattaaaaacaataaaagataggttttaga 23990325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 49716735 - 49716595
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| ||| ||| |||| ||||||||  | |||||||||||||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  49716735 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 49716636  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttg 154  Q
     |||||||||| ||||||  ||||  |||||||||||||||    
T  49716635 taaaggatgtagtaaattttatgggttgccctaggcagttg 49716595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 171
Target Start/End: Complemental strand, 15297542 - 15297419
Alignment:
Q  48 atcgaagtaataaat-aattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||| ||||| ||||| |||||||| |||||| ||||||||||||   ||||| |||||||| |||| | ||||||||||||||| | |||||||    
T  15297542 atcgaagtagtaaatgaattcatatccacggggaccgttgttaacttctacaaagcaatttcattatcaaaatg-atgtattaaattcaaggttgcccta 15297444  T
Q  147 ggcagttgagttgatttttgtaaca 171  Q
     |||||||  ||  |||||||||||    
T  15297443 agcagttggattagtttttgtaaca 15297419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 252
Target Start/End: Original strand, 27282183 - 27282343
Alignment:
Q  92 ttctattcagcaagttcattattaaaaaggatgtattaaattcaatggt-gccctaggcagttgagttgatttttgtaacataaat-tgattacaaacaa 189  Q
    ||||| ||||||| ||| |||| |||||  ||||||||||||||| ||| ||||||||||||||  ||| ||||| |||  ||||| | | || ||||||    
T  27282183 ttctactcagcaatttctttataaaaaaa-atgtattaaattcaaaggttgccctaggcagttggattggtttttataaagtaaatgtaaata-aaacaa 27282280  T
Q  190 taaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    | ||| |||||||||| ||| ||||||||||||||||||||| || || |||| ||||||||||    
T  27282281 ttaaa-attggttttatgaatattagagagaagtatggttaagactttcgaattctccgaagtt 27282343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 50196715 - 50196789
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataa-ataattcgtatccacgaggaccgatgttaa 90  Q
    |||||||||||||||||| ||||||||  | || |||||||||| | |||| |||||||||||||||| ||||||    
T  50196715 tgataaatatttggcaagtgtaccaaaaactattgaagtaataataaaatttgtatccacgaggaccgttgttaa 50196789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 32506000 - 32506090
Alignment:
Q  162 ttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||| |||||||||   |||| |||||||||||  |||||||| |||| |||| |||||||| ||||||| ||||| |||||||||||||||    
T  32506000 ttttctaacataaacgaattaaaaacaataaaa-gttggttttaagaatattatagagaagtgtggttaagaccttcgaatcctccgaagtt 32506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 34552438 - 34552578
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| ||||||| |||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||  |||  |    
T  34552438 tgatagatatttgacaagtgtaccaaaa-ctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtttgttaaaa 34552536  T
Q  116 aaaaggatgtattaaattcaatgg---tgccctaggcagttg 154  Q
     |||||||||| ||||||  ||||   |||||||||||||||    
T  34552537 taaaggatgtagtaaattttatggggttgccctaggcagttg 34552578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 49720203 - 49720100
Alignment:
Q  31 caagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtatta 129  Q
    |||| ||||||||  | |||||||||||||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  | ||||| |||| ||    
T  49720203 caagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaagggtgtagta 49720104  T
Q  130 aatt 133  Q
    ||||    
T  49720103 aatt 49720100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 18392747 - 18392666
Alignment:
Q  27 ttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagtt 107  Q
    |||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||    
T  18392747 ttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagtt 18392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 252
Target Start/End: Complemental strand, 36327172 - 36326936
Alignment:
Q  16 atgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatt 114  Q
    |||||| |||||||||||| | ||||||  | ||||||||||||||||| ||||||||||||||||||| |||||||||||| || |||| ||| ||||     
T  36327172 atgatagatatttggcaagtgaaccaaaa-ctatcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactctgcaatttctttatc 36327074  T
Q  115 aaaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattag 214  Q
    ||||| |||||||||||||||| | ||||||||| ||||   ||| | ||||||| |||||  ||||| |||||||||||  ||||||||||||||||||    
T  36327073 aaaaaagatgtattaaattcaaagttgccctaggaagttagattggtatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattag 36326974  T
Q  215 agagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  36326973 agagatgtatggttaagacctttgaatcctccgaagtt 36326936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 252
Target Start/End: Original strand, 23673375 - 23673580
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||| ||| ||| |||| |||||||||||||||||||||| | |||||||    
T  23673375 atcgaagtaataaataaattcgtatccacgaggaccgttgttaatttctactcaacaatttctttatcaaaaaggatgtattaaattcaaggttgcccta 23673474  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctttgaatcctcc 246  Q
    ||||||||  |||   ||||||| |||||  ||||| |||||||||||  ||||||||||||||||||||||| |||||||||| ||||| |||||||||    
T  23673475 ggcagttggattggcatttgtaaaataaacggattaaaaacaataaaagtttggttttagaaaattagagagatgtatggttaagaccttcgaatcctcc 23673574  T
Q  247 gaagtt 252  Q
    ||||||    
T  23673575 gaagtt 23673580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 31528635 - 31528406
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||| |||| || ||||||||||| |   |||||||||| | ||||| |||||||||||    
T  31528635 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaaatttgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 31528536  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaatta 213  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  ||||||||     
T  31528535 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt- 31528438  T
Q  214 gagagaagtatggttaaaacctttgaatcctc 245  Q
    |||||||||||||||||  |||| ||||||||    
T  31528437 gagagaagtatggttaagtccttcgaatcctc 31528406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 13710315 - 13710097
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | |||||||||||||||||||||||| ||||||| |  ||||| || |   |||||||||| | ||||| |||||||||||    
T  13710315 tgatagatatttggcaagtgaaccaaattcaatcgaagtaataaa-aattcgtttttacgagaactgtatttaacttctacttagcaatttcattattaa 13710217  T
Q  117 aaaggatgtattaaattcaa--tggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattag 214  Q
    ||||||||||| ||||| |   || ||||  ||| ||||||||||| ||  ||||||||||  ||||| ||||||||||| ||||||||||||||||| |    
T  13710216 aaaggatgtataaaatttatattgatgcctgaggaagttgagttgagtt--gtaacataaacggattaaaaacaataaaagattggttttagaaaatttg 13710119  T
Q  215 agagaagtatggttaaaacctt 236  Q
    |||||||||||||||| |||||    
T  13710118 agagaagtatggttaagacctt 13710097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 250
Target Start/End: Complemental strand, 31626773 - 31626561
Alignment:
Q  38 accaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa- 136  Q
    |||||||||||||||||||||||| ||||||| || | |||||| | | |||||||||| | ||||| |||||||||||||||||||| | ||||| |      
T  31626773 accaaattcaatcgaagtaataaa-aattcgtttcaatgaggactg-tattaacttctacttagcaatttcattattaaaaaggatgtgtaaaatttata 31626676  T
Q  137 -tggtgccctaggcagttgagttgatttttgtaacataaattga-ttacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacc 234  Q
     |||||||||||||||||||||||||||| ||||||||||  || ||| ||| ||||||  ||||||||||||||||  |||||||| ||||||||  |     
T  31626675 ttggtgccctaggcagttgagttgatttt-gtaacataaaaggaattaaaaataataaaggattggttttagaaaatctgagagaagaatggttaagtca 31626577  T
Q  235 tttgaatcctccgaag 250  Q
    || |||||||||||||    
T  31626576 ttcgaatcctccgaag 31626561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 249
Target Start/End: Complemental strand, 40018224 - 40017992
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    |||| ||||||||||||| | |||||||||||||||||||||||| |||| || | ||| ||||  |   |||||||| | |  |||| ||  |||||||    
T  40018224 tgatgaatatttggcaagtgaaccaaattcaatcgaagtaataaaaaatttgttttcacaaggagtgcatttaacttcgacttggcaatttttttattaa 40018125  T
Q  117 aaaggatgtattaaattcaa--tggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattag 214  Q
    ||||||||||| ||||| |   || ||||||||||||||||||||||||  ||||||||||  ||||| ||||||||| | | |||||| |||||| | |    
T  40018124 aaaggatgtataaaatttatattgatgccctaggcagttgagttgattt--gtaacataaacggattaaaaacaataagagactggtttaagaaaaattg 40018027  T
Q  215 agagaagtatggttaaaacctttgaatcctccgaa 249  Q
    |||||||||||||||| ||||| ||||||||||||    
T  40018026 agagaagtatggttaagaccttcgaatcctccgaa 40017992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 16295113 - 16294908
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa--tggtgccc 144  Q
    |||||||||||||||||  ||  |||||||||||||| |||||| ||||| ||||||| ||| ||||  ||| |||||||| ||||| |   || |||||    
T  16295113 atcgaagtaataaataagatcaaatccacgaggaccgttgttaatttctactcagcaatttcgttatcgaaa-ggatgtataaaatttatattgatgccc 16295015  T
Q  145 taggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatcc 243  Q
    |||||||||||||||||||| ||| ||||||  ||||| ||||||  ||| ||| ||||| |||||||| |||||||||||||||||  |||| ||||||    
T  16295014 taggcagttgagttgatttt-gtatcataaaccgattaaaaacaaataaagattagttttcagaaaatt-gagagaagtatggttaagtccttcgaatcc 16294917  T
Q  244 tccgaagtt 252  Q
    |||||||||    
T  16294916 tccgaagtt 16294908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 51 - 250
Target Start/End: Original strand, 32575718 - 32575920
Alignment:
Q  51 gaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa-tggtgccctagg 148  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||| ||| | | ||| |||| | ||| |||||||||||||||| || | |||||||    
T  32575718 gaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcaacgatttcgttataataaatgatgtattaaattcaattgttaccctagg 32575817  T
Q  149 cagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaattagag--agaagtatggttaaaacctttgaatcct 244  Q
    ||||||  ||| ||||| |||  ||||  | | || |||||||||||  |||||||| |||| |||||||  |||||||||||||| ||||| |||||||    
T  32575818 cagttggattg-tttttataaagtaaacgtaaata-aaacaataaaa-gttggttttaagaatattagagaaagaagtatggttaagaccttcgaatcct 32575914  T
Q  245 ccgaag 250  Q
    ||||||    
T  32575915 ccgaag 32575920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 30720036 - 30719991
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  30720036 aaaggatatattaaattcaatggtgccttaggcagttgagttgatt 30719991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 29436082 - 29435996
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaatt 133  Q
    |||||||||||||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  | |||||||||| ||||||    
T  29436082 atcgaagtaataataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaataaaggatgtagtaaatt 29435996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 4e-53; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 15535270 - 15535066
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| | ||| |||| |||||||||||||||||||||| | |||||||    
T  15535270 atcgaagtaataaataaattcgtatccacgaggaccgttgttaacttctactcagccatttctttataaaaaaggatgtattaaattcaaggttgcccta 15535171  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||| |||||||| | |||| ||||| |||||||||||  ||||||||| ||||||| || || |||||||||| |||||  ||||||||    
T  15535170 ggcagttgagttga-ttttgtaaaacaaatagattaaaaacaataaaagtttggttttacaaaattaaagtgatgtatggttaagaccttcaaatcctcc 15535072  T
Q  247 gaagtt 252  Q
    ||||||    
T  15535071 gaagtt 15535066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 19664667 - 19664901
Alignment:
Q  18 gataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    |||||| |||||||||| | ||||||  | ||||||||||||||||| || |||||||||||||||| |||| | ||||| ||| ||| ||| |||| ||    
T  19664667 gataaagatttggcaagtgaaccaaaa-ctatcgaagtaataaataaatttgtatccacgaggaccgttgtttatttctactcaacaatttctttatcaa 19664765  T
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    |||||||||||||||||||| | |||||||||||||||  ||| | ||||||| |||||  ||||| |||||||||||  ||||||| ||||||||||||    
T  19664766 aaaggatgtattaaattcaaggttgccctaggcagttggattggtatttgtaaaataaacggattaaaaacaataaaagtttggtttaagaaaattagag 19664865  T
Q  217 agaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||| |||||||||| ||||| |||||||||||||||    
T  19664866 agatgtatggttaagaccttcgaatcctccgaagtt 19664901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 13017189 - 13017419
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||| | ||||| |||||||||||     |||||||||| | ||||| |||||||||||    
T  13017189 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactatatttaacttctacttagcaatttcattattaa 13017288  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaatta 213  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  ||||||||     
T  13017289 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttcagaaaatt- 13017386  T
Q  214 gagagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||||||  |||| |||||||||    
T  13017387 gagagaagtatggttaagtccttcgaatcctcc 13017419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 16883820 - 16883685
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||   |||| ||||||||||| |||||||||||||||||||||    
T  16883820 aaaggatgtattaaattcaagggttccctaggcagttgaattgatttttgtaacataaacgaattaaaaacaataaaagattggttttagaaaattagag 16883721  T
Q  217 agaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||| || || ||||||| |||||||    
T  16883720 agaagtatggttaagacattcgaatccttcgaagtt 16883685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 15540784 - 15540580
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||||||||| || ||| |||   |||||  |||||||||||| ||||||| |||  ||| |||||||||||||||||||||| | | |||||    
T  15540784 atcgaagtaataaataaatttgtaaccaatcggaccattgttaacttctactcagcaatttctatatcaaaaaggatgtattaaattcaaggtttcccta 15540685  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||| |||| ||| |||||  ||||| |||||||||||  || |||||||||||||| |||||  ||||||||| ||||| |||||||||    
T  15540684 ggcagttgagttga-ttttctaaaataaagggattaaaaacaataaaagtttagttttagaaaattaaagagatttatggttaagaccttcgaatcctcc 15540586  T
Q  247 gaagtt 252  Q
    ||||||    
T  15540585 gaagtt 15540580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 32427514 - 32427311
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||||||||| || ||||| |||||||||| |||||| ||||| ||||||| ||| |||| ||||| |||||||||||||||| | |||||||    
T  32427514 atcgaagtaataaataaatttgtatctacgaggaccgttgttaa-ttctactcagcaatttctttatcaaaaaagatgtattaaattcaaggttgcccta 32427416  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagagagaagtatggttaaaacctttgaatcctcc 246  Q
    | ||||||  ||| | ||||||| |||||   |||| ||||||| |||  ||||||||||||||||||||||| || || |||| ||||||||||||||     
T  32427415 g-cagttggattggtatttgtaaaataaacgaattaaaaacaatgaaagtttggttttagaaaattagagagatgtttgattaagacctttgaatcctct 32427317  T
Q  247 gaagtt 252  Q
    ||||||    
T  32427316 gaagtt 32427311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 14790864 - 14790628
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || ||||||||||||||||||| |||||| ||||| || |||| ||| |||| |    
T  14790864 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtatccacgaggaccgttgttaatttctactcggcaatttctttatca 14790765  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  14790764 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 14790669  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  14790668 tagagagaagtatggttaagaccttcgaatcctctgaagtt 14790628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 22221959 - 22221736
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatg 124  Q
    |||||||||| ||||||||  | ||||||||| |||  ||||||| |||||||||||     ||| |||||| | ||||| |||||||||||||||||||    
T  22221959 atttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattattaaaaaggatg 22221860  T
Q  125 tattaaat-tcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaagt 222  Q
    ||| || | | | |||||||||||||||||||||||||||  ||||  |||| | |||| ||||||||||  ||||||||| |||||||| ||||||||     
T  22221859 tataaattattattggtgccctaggcagttgagttgattta-gtaa--taaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaagc 22221764  T
Q  223 atggttaaaacctttgaatcctccgaag 250  Q
    ||||||||  |||| |||||||||||||    
T  22221763 atggttaagtccttcgaatcctccgaag 22221736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 22247794 - 22247571
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatg 124  Q
    |||||||||| ||||||||  | ||||||||| |||  ||||||| |||||||||||     ||| |||||| | ||||| |||||||||||||||||||    
T  22247794 atttggcaagtgtaccaaaagctatcgaagtagtaataaattcgtttccacgaggactatatttagcttctactaagcaatttcattattaaaaaggatg 22247695  T
Q  125 tattaaat-tcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaagt 222  Q
    ||| || | | | |||||||||||||||||||||||||||  ||||  |||| | |||| ||||||||||  ||||||||| |||||||| ||||||||     
T  22247694 tataaattattattggtgccctaggcagttgagttgattta-gtaa--taaactaattaaaaacaataaagaattggtttttagaaaatt-gagagaagc 22247599  T
Q  223 atggttaaaacctttgaatcctccgaag 250  Q
    ||||||||  |||| |||||||||||||    
T  22247598 atggttaagtccttcgaatcctccgaag 22247571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 252
Target Start/End: Complemental strand, 14795892 - 14795656
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || |||||| | |||||||||| |||||| ||||| || |||| ||| |||| |    
T  14795892 tgatagatatttggcaagtgtaccaaaagctatcgaagtagtaataaagttcgtacctacgaggaccgttgttaatttctactcggcaatttctttatca 14795793  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggtttt-agaaaat 211  Q
    |||||||||||| || ||  || |  ||||||||||||||||||||  ||||||||||||||  | | || |||||||||||  |||||||| |||| ||    
T  14795792 aaaaggatgtataaatttatattgattgccctaggcagttgagttg--ttttgtaacataaacgtaaata-aaacaataaaa-gttggttttcagaatat 14795697  T
Q  212 tagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||||||||| ||||| |||||||| ||||||    
T  14795696 tagagagaagtatggttaagaccttcgaatcctctgaagtt 14795656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 121 - 252
Target Start/End: Original strand, 20527266 - 20527399
Alignment:
Q  121 gatgtattaaattcaatggt-gccctaggcagttgagttgatttttgtaacataaat-tgattacaaacaataaaatattggtttt-agaaaattagaga 217  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||  | | || |||||||||||  |||||||| |||| ||||||||    
T  20527266 gatgtattaaattcaaaggttgccctaggcagttgaattgatttttgtaacgtaaacataaataaaaacaataaaa-gttggttttaagaatattagaga 20527364  T
Q  218 gaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||||||| ||||| |||||||||||||||    
T  20527365 gaagtatggttaagaccttcgaatcctccgaagtt 20527399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 217
Target Start/End: Original strand, 11183937 - 11184037
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||   | || |||||||||||  | | ||||||||||||||||    
T  11183937 aaaggatgtattaaattcaagagttccctaggcagttgagttgatttttgtaacataaacgtaataaaaacaataaaagttggtttttagaaaattagag 11184036  T
Q  217 a 217  Q
    |    
T  11184037 a 11184037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 30978332 - 30978441
Alignment:
Q  137 tggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt--agaaaattagagagaagtatggttaaaacc 234  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  |||||||||  |||||||| |||||||||||||||||  ||    
T  30978332 tggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggtttttaagaaaatt-gagagaagtatggttaagtcc 30978429  T
Q  235 tttgaatcctcc 246  Q
    || |||||||||    
T  30978430 ttcgaatcctcc 30978441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 252
Target Start/End: Complemental strand, 27649316 - 27649112
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggt-gccct 145  Q
    |||||||||||||||||  ||| |||||||||||||| |||||| | ||| ||||||| ||| || |  ||| ||||| ||||||||   |||| |||||    
T  27649316 atcgaagtaataaataagatcgaatccacgaggaccgttgttaattcctactcagcaatttctttctcgaaa-ggatgcattaaatttt-tggtcgccct 27649219  T
Q  146 aggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatcct 244  Q
    |||||||||  ||| ||||| |||||||||   |    |||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||| |||||||    
T  27649218 aggcagttggattggtttttataacataaacgtagatgaaacaataaaag-ttggttttaagaaaattagagcgaagtatggttaagaccttcgaatcct 27649120  T
Q  245 ccgaagtt 252  Q
    ||||||||    
T  27649119 ccgaagtt 27649112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 28118094 - 28118049
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  28118094 aaaggatatattaaattcaatggtgccctaggcagttgagttgatt 28118049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 1838690 - 1838610
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtat 127  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||| ||||| || |||| ||| |||| |||||||||||||    
T  1838690 atcgaagtaataaataaattcgtatccacaaggaccgttgttaatttctactcggcaatttctttatcaaaaaggatgtat 1838610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 1838539 - 1838483
Alignment:
Q  197 ttggtttta-gaaaattagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  1838539 ttggttttaagaatattagagagaagtatggttaagaccttcgaatcctccgaagtt 1838483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 9313643 - 9313687
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  9313643 aaaggatatattaaattcaatgg-gccctaggcagttgagttgatt 9313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 32704422 - 32704490
Alignment:
Q  184 aaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||||| ||||| |||||||| ||||||    
T  32704422 aaacaataaaa-gttggttttcagaatattagagagaagtatggttaagaccttcgaatcctctgaagtt 32704490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 11411127 - 11410988
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| ||| ||| |||| ||||||||  | |||||||||||||  || |||||||||||||| |||  |||||| ||||| | ||||||||| |||  |    
T  11411127 tgatagataattgacaagtgtaccaaaaactatcgaagtaataataaagttcgtatccacgagtaccattgttaatttctacttagcaagttcgttaaaa 11411028  T
Q  116 aaaaggatgtattaaattcaatgg--tgccctaggcagtt 153  Q
     |||||||||| ||||||  ||||  ||||||||||||||    
T  11411027 taaaggatgtagtaaattttatgggttgccctaggcagtt 11410988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 12980594 - 12980728
Alignment:
Q  117 aaaggatgtattaaattc-aatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    |||||||||||||||||| || | |||||||||||||||  ||| ||||| ||| ||||| |  ||| |||| ||||||  |||||| | |||||||| |    
T  12980594 aaaggatgtattaaattctaaagttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttct-gaaaattaaa 12980691  T
Q  216 gagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||  ||||| || ||||| |||||||||||||||    
T  12980692 gagaaaaatggtcaagaccttcgaatcctccgaagtt 12980728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 252
Target Start/End: Original strand, 12983481 - 12983615
Alignment:
Q  117 aaaggatgtattaaattcaa-tggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    |||||||||||||||||||| || |||||||||||||||  ||| ||||| ||| ||||| |  ||| |||| ||||||  |||||| | |||| ||| |    
T  12983481 aaaggatgtattaaattcaaatgttgccctaggcagttggattggtttttataa-ataaactatttaaaaacgataaaagcttggttctggaaa-ttaaa 12983578  T
Q  216 gagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||  ||||| || ||||| |||||||||||||||    
T  12983579 gagaaaaatggtcaagaccttcgaatcctccgaagtt 12983615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 22626312 - 22626540
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||| | ||||| ||||||||||| |   |||||||||| | ||||| |||||||||||    
T  22626312 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 22626411  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| ||||||||||  ||||| ||||||||||| ||    
T  22626412 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaataaagaattggatttagaaaatt-ga 22626509  T
Q  216 gagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||||  |||| |||||||||    
T  22626510 gagaagtatggttaagtccttcgaatcctcc 22626540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 11138570 - 11138798
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||| | ||||| ||||||||||| |   |||||||||| | ||||| |||||||||||    
T  11138570 tgatagatatttggcaagtgaaccaaattcgatcgaagtaataaaaagttcgtttccacgaggactgtatttaacttctacttagcaatttcattattaa 11138669  T
Q  117 aaaggatgtattaaatt-caatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattaga 215  Q
    ||||||||||| || ||  | |||||||||||||||||||||||| ||| |||||||||| |||||| |||||||| |  ||||| || |||||||| ||    
T  11138670 aaaggatgtataaatttatattggtgccctaggcagttgagttga-tttagtaacataaactgattaaaaacaatatagaattggattcagaaaatt-ga 11138767  T
Q  216 gagaagtatggttaaaacctttgaatcctcc 246  Q
    |||||||||||||||  |||| |||||||||    
T  11138768 gagaagtatggttaagtccttcgaatcctcc 11138798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 248
Target Start/End: Original strand, 39563510 - 39563742
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaa 116  Q
    ||||| |||||||||||| | ||||||||||||| |||||||||| ||||||| ||||||||||| | | |||||||||| | ||||| |||||||| ||    
T  39563510 tgatagatatttggcaagtgaaccaaattcaatcaaagtaataaaaaattcgtttccacgaggactg-tattaacttctacttagcaatttcattataaa 39563608  T
Q  117 aaaggatgtattaaatt--caatggtgccctaggcagttgagttgatttttgtaacataaa-ttgattacaaacaataaaatattggttttagaaaatta 213  Q
    ||||||||| | |||||   | | |||||||||||||||||||||| ||||||||||||||    |||| ||| | ||||| ||||||||||||||||      
T  39563609 aaaggatgtgtaaaatttatattagtgccctaggcagttgagttga-ttttgtaacataaacaaaattaaaaatagtaaaagattggttttagaaaatct 39563707  T
Q  214 gagagaagtatggttaaaacctttgaatcctccga 248  Q
    |||||||| ||||||||  |||| |||||||||||    
T  39563708 gagagaagaatggttaagtccttcgaatcctccga 39563742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 48 - 154
Target Start/End: Complemental strand, 46731669 - 46731562
Alignment:
Q  48 atcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgcccta 146  Q
    ||||||||||| ||||| || |||||||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||||| |||| | |||||||    
T  46731669 atcgaagtaatgaataaatttgtatccacgaggaccgttgttaacttctactcagcaatttctttatcaaaaaggatgtattaaactcaaggttgcccta 46731570  T
Q  147 ggcagttg 154  Q
    ||||||||    
T  46731569 ggcagttg 46731562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 20536333 - 20536490
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataat---tcgtatccacgaggaccgatgttaacttctattcagcaagttcattat 113  Q
    ||||| |||||||| ||| ||||||||  | || |||||| |||||||    |||||||||||||||| |   |||||||||| | || || ||||||||    
T  20536333 tgatagatatttggaaagtgtaccaaaaactattgaagtagtaaataaaagatcgtatccacgaggactgtatttaacttctacttagaaatttcattat 20536432  T
Q  114 taaaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaaca 171  Q
    ||||||||||||| ||||||||| ||||||||||||||||| ||||| || |||||||    
T  20536433 taaaaaggatgtagtaaattcaagggtgccctaggcagttgggttgacttgtgtaaca 20536490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 175
Target Start/End: Complemental strand, 35366562 - 35366462
Alignment:
Q  74 acgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacata 173  Q
    |||||||||| |||||||||||| | ||||| |||||||| |||||||||||||||||||  | | ||||||||||||| |||||| | |||||||||||    
T  35366562 acgaggaccgttgttaacttctacttagcaatttcattat-aaaaaggatgtattaaattttaggttgccctaggcagtcgagttggtatttgtaacata 35366464  T
Q  174 aa 175  Q
    ||    
T  35366463 aa 35366462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 50096925 - 50096825
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggttttagaaaattagag 216  Q
    ||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||   | || ||||| |||||  | | ||||||||||||||||    
T  50096925 aaaggatgtattaaattcaagagtgccctaagcagttgagttgatttttgtaacataaacgtaataaaaacagtaaaagttggtttttagaaaattagag 50096826  T
Q  217 a 217  Q
    |    
T  50096825 a 50096825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 252
Target Start/End: Complemental strand, 46731560 - 46731504
Alignment:
Q  196 attggttttagaaaattagagagaagtatggttaaaacctttgaatcctccgaagtt 252  Q
    |||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||    
T  46731560 attggttttagaaaattagagagatgtaaggttaagaccttcgaatcctccgaagtt 46731504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 250
Target Start/End: Complemental strand, 13979564 - 13979498
Alignment:
Q  184 aaacaataaaatattggtttta-gaaaattagagagaagtatggttaaaacctttgaatcctccgaag 250  Q
    |||||||||||  ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  13979564 aaacaataaaag-ttggttttaagaatattagagagaagtatggttaagacctttgaatcctccgaag 13979498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 19869343 - 19869226
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| |||| ||| || ||| ||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  19869343 tgatagatatttggcaagtgtactaaaatctatcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 19869244  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  19869243 taaaggatgtagtaaatt 19869226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 27055237 - 27055096
Alignment:
Q  16 atgataaatatttggcaagggtaccaaattcaatcgaagtaataaataatt-cgtatccacgaggaccgatgttaacttctattcagcaagttcattatt 114  Q
    |||||||||||||||||||  |||||||  | ||||||||| |||  |||| ||||||||||||||||| |||||| ||||| | ||||||||| |||      
T  27055237 atgataaatatttggcaagcataccaaaa-ctatcgaagtagtaataaatttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaa 27055139  T
Q  115 aaaaaggatgtattaaattcaatgg---tgccctaggcagttg 154  Q
    | ||| |||||| ||||||  ||||   |||||||||||||||    
T  27055138 ataaaagatgtagtaaattttatggggttgccctaggcagttg 27055096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 13979700 - 13979616
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaat 132  Q
    |||||||||||||||||  ||| |||||||||||| | |||||| ||||| ||||||| ||| ||| |  ||||||||||||||||    
T  13979700 atcgaagtaataaataaaatcgaatccacgaggactgctgttaatttctactcagcaatttcttta-tcgaaaggatgtattaaat 13979616  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 25492214 - 25492146
Alignment:
Q  65 ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaatt 133  Q
    |||||||||||||||| || |||||| ||||| | |||||||||||||  | ||| |||||| ||||||    
T  25492214 ttcgtatccacgaggatcgttgttaatttctacttagcaagttcattaaaataaaagatgtagtaaatt 25492146  T

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Target: scaffold0363 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 249
Target Start/End: Original strand, 41 - 240
Alignment:
Q  48 atcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaatggt-gcccta 146  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||| | | | ||||| ||| |||| ||||||||| | |||||||||||||| ||||||    
T  41 atcgaagtagtaaataattcgt-tccacgaggaccgttgttaactacaacttagcaatttctttatcaaaaaggatatgttaaattcaatggttgcccta 139  T
Q  147 ggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaagtatggttaaaacctttgaatcctc 245  Q
    ||||||||||||| |||||  ||||||||   |||| |||||||||||  |||||||| |||| ||||||||||||||||||||| || || ||||||||    
T  140 ggcagttgagttggttttt--aacataaacaaattaaaaacaataaaa-gttggttttaagaatattagagagaagtatggttaagacattcgaatcctc 236  T

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Target: scaffold0440 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 250
Target Start/End: Complemental strand, 10101 - 9875
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaat-aattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggat 123  Q
    |||||||||| | | ||||||| ||||||||||||||  ||||||| ||| |  |||| |   |||||||||| | ||||| ||||||||||||||||||    
T  10101 atttggcaagtgaatcaaattcgatcgaagtaataaaagaattcgtttcctcagggactgtatttaacttctacttagcaatttcattattaaaaaggat 10002  T
Q  124 gtattaaattcaat-ggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattggtttt-agaaaattagagagaag 221  Q
    |||| || ||  || ||| ||||||||||||||||||||||  |||||||||| |||||| ||||||||||  ||||||||| |||||||| ||||||||    
T  10001 gtataaatttatattggtcccctaggcagttgagttgattta-gtaacataaactgattaaaaacaataaataattggtttttagaaaatt-gagagaag 9904  T
Q  222 tatggttaaaacctttgaatcctccgaag 250  Q
    |||||||||  |||| |||||||||||||    
T  9903 tatggttaagtccttcgaatcctccgaag 9875  T

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Target: scaffold0264 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 25 - 250
Target Start/End: Original strand, 24193 - 24416
Alignment:
Q  25 atttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatg 124  Q
    |||||||||| ||||||||  | ||||||||| |||  |||| || ||||||||||| |   |||||||||| ||| ||| |||||||||||||||||||    
T  24193 atttggcaagtgtaccaaaagctatcgaagtagtaataaatttgtttccacgaggactgtatttaacttctactcaacaatttcattattaaaaaggatg 24292  T
Q  125 tattaaat-tcaatggtgccctaggcagttgagttgatttttgtaacataaattgattacaaacaataaaatattgg-ttttagaaaattagagagaagt 222  Q
    ||| || | | | |||||||||||||||||||||||| ||| |||  ||||| |||||| ||||||||||  ||||| |||||||||||| ||||||||     
T  24293 tataaattattattggtgccctaggcagttgagttga-tttagta--ataaactgattaaaaacaataaagaattggtttttagaaaatt-gagagaagc 24388  T
Q  223 atggttaaaacctttgaatcctccgaag 250  Q
    ||||||||  |||| |||||||||||||    
T  24389 atggttaagtccttcgaatcctccgaag 24416  T

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Target: scaffold0352 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 194
Target Start/End: Original strand, 2649 - 2796
Alignment:
Q  48 atcgaagtaataaataat-tcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgtattaaattcaa-tggtgccct 145  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||| ||||||| ||| ||| | ||||||||||||||||||||| || |||||     
T  2649 atcgaagtaataaataagatcgtatccacgaggaccgttgttaacttctactcagcaatttcgtta-tcaaaaggatgtattaaattcaattgttgccca 2747  T
Q  146 aggcagttgagttgatttttgtaacataaattgattacaaacaataaaa 194  Q
    ||| |||||  ||| |||||||||||| ||  ||||| |||| ||||||    
T  2748 aggaagttggattggtttttgtaacatgaacggattaaaaactataaaa 2796  T

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Target: scaffold0352; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 2794 - 2837
Alignment:
Q  207 aaaattagagagaagtatggttaaaacctttgaatcctccgaag 250  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||    
T  2794 aaaatttgagagaagtatcgttaagacctttgaatcctccgaag 2837  T

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Target: scaffold0766 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 3739 - 3590
Alignment:
Q  26 tttggcaagggtaccaaattcaatcgaagtaataaataattcgtatccacgaggaccgatgttaacttctattcagcaagttcattattaaaaaggatgt 125  Q
    ||||||||| ||||||| ||| ||||||||||||||  ||| |||||||||||||||| |||||||||||| ||||||| || ||||  | ||| |||||    
T  3739 tttggcaagtgtaccaa-ttctatcgaagtaataaa--atttgtatccacgaggaccgttgttaacttctactcagcaatttaattaagataaatgatgt 3643  T
Q  126 attaaattcaatggtgccctaggcagttgagttgatttttgtaacataaattg 178  Q
    ||||||||||    | ||||| ||||||| |||  |||||| |||||||||||    
T  3642 attaaattcaggattaccctaagcagttgggttcttttttgcaacataaattg 3590  T

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Target: scaffold0134 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 7498 - 7453
Alignment:
Q  117 aaaggatgtattaaattcaatggtgccctaggcagttgagttgatt 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  7498 aaaggatatattaaattcaatggtgccctaggcagttgagttgatt 7453  T

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Target: scaffold0567 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 5995 - 6042
Alignment:
Q  201 ttttagaaaattagagagaagtatggttaaaacctttgaatcctccga 248  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5995 ttttagaaaattagagagaagtatggttaagaccttcgaatcctccga 6042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 19509 - 19649
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    |||||||||||||||||| ||||||||  |  || ||||| |||  || ||||||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  19509 tgataaatatttggcaagtgtaccaaaa-ctgtcaaagtagtaataaagttcgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 19607  T
Q  116 aaaaggatgtattaaattcaatgg---tgccctaggcagttg 154  Q
     |||||||||| ||||||  ||||   |||||||||||||||    
T  19608 taaaggatgtagtaaattttatggggttgccctaggcagttg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 33730 - 33846
Alignment:
Q  17 tgataaatatttggcaagggtaccaaattcaatcgaagtaataaataa-ttcgtatccacgaggaccgatgttaacttctattcagcaagttcattatta 115  Q
    ||||| |||||||||||| ||||||||  | ||||||||| |||  || || |||||||||||||||| |||||| ||||| | ||||||||| |||  |    
T  33730 tgatagatatttggcaagtgtaccaaaa-ctatcgaagtagtaataaagtttgtatccacgaggaccgttgttaatttctacttagcaagttcgttaaaa 33828  T
Q  116 aaaaggatgtattaaatt 133  Q
     |||||||||| ||||||    
T  33829 taaaggatgtactaaatt 33846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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