View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21147_low_5 (Length: 372)
Name: NF21147_low_5
Description: NF21147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21147_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 20 - 356
Target Start/End: Complemental strand, 7108628 - 7108292
Alignment:
| Q |
20 |
tccagaaaaccatagtaatctcattgattcaaggaatactgatacacaatttgttcttatatggtttgccattttcattattaaaagatttggagagaag |
119 |
Q |
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| T |
7108628 |
tccagaaaaccatagtaatctcattgattcaaggaatactgatacacaatttgtccttatatgctttgctattttcattgttaaaagatttggagagaag |
7108529 |
T |
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| Q |
120 |
cattgggaacttcatttggagtggggacattgagaagaggaaattagtcattgtggcatggaaaaaatttgtaagccattagaggagggagggttaggta |
219 |
Q |
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| T |
7108528 |
cattaggaacttcatttggagtggggacattgagaagaggaaattagtcattgtggcatgaaaaaaatttgtaagccattagaggaaggagggttaggta |
7108429 |
T |
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| Q |
220 |
ttagatatctaatccatcttaatgaagcttataatcttaagctttgttgagagaatggcgtcttctgatacggatcgggcaaagatgttaaggtctagag |
319 |
Q |
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| T |
7108428 |
ttagatatctaatccatcttaatgaagcttataatcttaagctttgttgggagaatggcgtcttctgatacggattgggcaaagatgttaaggtctagag |
7108329 |
T |
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| Q |
320 |
ttttaaaaaacgatagatgtatttcttatcatatttt |
356 |
Q |
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|||||||||| |||||||||||||||||||||||||| |
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| T |
7108328 |
ttttaaaaaatgatagatgtatttcttatcatatttt |
7108292 |
T |
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