View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21149_low_22 (Length: 259)
Name: NF21149_low_22
Description: NF21149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21149_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 54878979 - 54878724
Alignment:
| Q |
1 |
aaaacttatctatagaacagcactaccctgttcctgttcttcaagcttcttaatatgtgccttaagaaccataataagttctctagcaggagcttgaatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54878979 |
aaaacttatctatagaacagcactaccctgttcctgttcttcaagcttcttaatatgtgccttaagaaccataataagttctctagcaggagcttgaatg |
54878880 |
T |
|
| Q |
101 |
gtagtaaccaaagcagaagaaggacttttcaatgaacccaacaaattagcataaatctcgccacgtgtcggcaatgtttcaagtttcttaaactcatcag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54878879 |
gtagtaaccaaagcagaagaaggacttttcaatgaacccaacaaattagcataaatctcgccacgtgtcggcaatgtttcaagtttcttaaactcatcag |
54878780 |
T |
|
| Q |
201 |
gaccataaaatttcccttcaaaaacagcaccagtaaaatcattttcttcaagcttc |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
54878779 |
gaccataaaatttcccttcaaaaacagcaccagtaaaatcattttcttcaagcttc |
54878724 |
T |
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