View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21149_low_30 (Length: 213)

Name: NF21149_low_30
Description: NF21149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21149_low_30
NF21149_low_30
[»] chr8 (46 HSPs)
chr8 (22-67)||(33198598-33198643)
chr8 (22-66)||(1197874-1197918)
chr8 (22-68)||(23828193-23828239)
chr8 (22-68)||(23838202-23838248)
chr8 (22-62)||(33198833-33198873)
chr8 (22-66)||(34345140-34345184)
chr8 (22-66)||(37197794-37197838)
chr8 (22-66)||(37197978-37198022)
chr8 (22-68)||(23831011-23831057)
chr8 (24-62)||(23838411-23838449)
chr8 (22-67)||(30439111-30439156)
chr8 (22-62)||(23085860-23085900)
chr8 (181-213)||(23085922-23085954)
chr8 (140-213)||(37197877-37197950)
chr8 (181-213)||(37198125-37198157)
chr8 (22-66)||(37198364-37198408)
chr8 (22-66)||(39921976-39922020)
chr8 (22-66)||(39922232-39922276)
chr8 (22-66)||(44429220-44429264)
chr8 (22-66)||(44433972-44434016)
chr8 (22-66)||(44434149-44434193)
chr8 (27-66)||(604746-604785)
chr8 (23-66)||(44430414-44430457)
chr8 (181-211)||(3990209-3990239)
chr8 (179-213)||(23830955-23830989)
chr8 (180-213)||(1276534-1276567)
chr8 (143-213)||(27853644-27853714)
chr8 (22-67)||(42045632-42045676)
chr8 (22-63)||(44430240-44430281)
chr8 (22-66)||(604394-604438)
chr8 (22-66)||(2084872-2084916)
chr8 (26-66)||(3459205-3459245)
chr8 (22-66)||(14683159-14683203)
chr8 (181-213)||(23828139-23828171)
chr8 (82-122)||(23828259-23828299)
chr8 (26-66)||(23960651-23960691)
chr8 (22-62)||(23960865-23960905)
chr8 (181-213)||(30439054-30439086)
chr8 (181-213)||(32062879-32062911)
chr8 (181-213)||(35617744-35617776)
chr8 (22-62)||(37197743-37197783)
chr8 (22-62)||(37198180-37198220)
chr8 (181-213)||(37410084-37410116)
chr8 (181-213)||(39922100-39922132)
chr8 (26-66)||(44430063-44430103)
chr8 (26-66)||(44433798-44433838)
[»] chr7 (60 HSPs)
chr7 (22-67)||(34837182-34837227)
chr7 (22-66)||(21224134-21224178)
chr7 (22-66)||(40450166-40450210)
chr7 (22-67)||(4680961-4681006)
chr7 (26-67)||(16492613-16492654)
chr7 (22-67)||(18486629-18486674)
chr7 (22-67)||(21128035-21128080)
chr7 (22-62)||(2527019-2527059)
chr7 (22-66)||(9142026-9142070)
chr7 (22-66)||(11646623-11646667)
chr7 (22-66)||(11650073-11650117)
chr7 (22-66)||(12140926-12140970)
chr7 (22-66)||(19222101-19222145)
chr7 (22-62)||(22324284-22324324)
chr7 (22-66)||(34837384-34837428)
chr7 (22-66)||(48640866-48640910)
chr7 (22-64)||(45419701-45419743)
chr7 (26-63)||(2354734-2354771)
chr7 (22-67)||(4455362-4455407)
chr7 (29-66)||(16671242-16671279)
chr7 (29-66)||(17645610-17645647)
chr7 (22-67)||(34988945-34988990)
chr7 (22-66)||(6249836-6249880)
chr7 (22-66)||(9142198-9142242)
chr7 (22-66)||(22773975-22774019)
chr7 (22-66)||(23591479-23591523)
chr7 (22-66)||(27716374-27716418)
chr7 (22-66)||(27716596-27716640)
chr7 (22-66)||(32278201-32278245)
chr7 (22-66)||(34837651-34837695)
chr7 (26-66)||(48641085-48641125)
chr7 (26-63)||(4681663-4681700)
chr7 (143-213)||(12140834-12140904)
chr7 (22-67)||(16377689-16377734)
chr7 (143-213)||(16671667-16671737)
chr7 (143-213)||(17646035-17646105)
chr7 (143-213)||(18486696-18486766)
chr7 (143-213)||(23591387-23591457)
chr7 (143-213)||(35124787-35124857)
chr7 (181-213)||(1566519-1566551)
chr7 (181-213)||(2853228-2853260)
chr7 (22-66)||(4454920-4454964)
chr7 (181-213)||(4680907-4680939)
chr7 (181-213)||(4681156-4681188)
chr7 (181-213)||(9141972-9142004)
chr7 (22-66)||(11645996-11646040)
chr7 (181-213)||(11646408-11646440)
chr7 (22-66)||(11646462-11646506)
chr7 (181-213)||(11650019-11650051)
chr7 (181-213)||(16671308-16671340)
chr7 (181-213)||(17645676-17645708)
chr7 (181-213)||(18487213-18487245)
chr7 (181-213)||(23591642-23591674)
chr7 (181-213)||(27716320-27716352)
chr7 (22-66)||(38694875-38694919)
chr7 (181-213)||(40686903-40686935)
chr7 (22-66)||(45285649-45285693)
chr7 (181-213)||(45419647-45419679)
chr7 (181-213)||(46264294-46264326)
chr7 (181-213)||(48640812-48640844)
[»] chr6 (32 HSPs)
chr6 (22-67)||(4100384-4100429)
chr6 (22-67)||(4125715-4125760)
chr6 (22-66)||(29201554-29201598)
chr6 (22-67)||(17199981-17200026)
chr6 (22-67)||(17906866-17906911)
chr6 (22-66)||(17202846-17202890)
chr6 (22-66)||(23610428-23610472)
chr6 (22-64)||(25068186-25068228)
chr6 (22-67)||(4811128-4811173)
chr6 (22-67)||(17200319-17200364)
chr6 (22-67)||(27579593-27579638)
chr6 (26-66)||(808468-808508)
chr6 (22-66)||(808689-808733)
chr6 (22-62)||(808829-808869)
chr6 (27-67)||(17010912-17010952)
chr6 (22-66)||(17201593-17201637)
chr6 (22-66)||(17201812-17201856)
chr6 (22-66)||(19121165-19121209)
chr6 (22-66)||(23622214-23622258)
chr6 (22-66)||(24223590-24223634)
chr6 (22-68)||(12295925-12295971)
chr6 (143-213)||(9828981-9829051)
chr6 (22-67)||(17011020-17011065)
chr6 (22-67)||(25067957-25068002)
chr6 (22-67)||(27315282-27315327)
chr6 (22-66)||(16799577-16799621)
chr6 (181-213)||(17201659-17201691)
chr6 (181-213)||(23622280-23622312)
chr6 (181-213)||(27315348-27315380)
chr6 (181-213)||(27579660-27579692)
chr6 (22-66)||(32208473-32208517)
chr6 (82-122)||(34294341-34294381)
[»] chr3 (36 HSPs)
chr3 (22-67)||(3847820-3847865)
chr3 (22-66)||(38887431-38887475)
chr3 (26-67)||(18094736-18094777)
chr3 (22-65)||(18094953-18094996)
chr3 (22-65)||(47503119-47503162)
chr3 (26-69)||(53047657-53047700)
chr3 (22-60)||(43819330-43819368)
chr3 (22-59)||(11220780-11220817)
chr3 (22-67)||(17755731-17755776)
chr3 (22-67)||(19057051-19057096)
chr3 (22-67)||(36643193-36643238)
chr3 (22-66)||(11454201-11454245)
chr3 (22-66)||(11522528-11522572)
chr3 (22-66)||(21969072-21969116)
chr3 (22-66)||(21991508-21991552)
chr3 (22-62)||(38887646-38887686)
chr3 (22-66)||(40050846-40050890)
chr3 (22-66)||(43017267-43017311)
chr3 (22-66)||(45514484-45514528)
chr3 (22-66)||(46451466-46451510)
chr3 (175-213)||(38887584-38887622)
chr3 (22-66)||(11454558-11454603)
chr3 (22-63)||(20877282-20877323)
chr3 (22-67)||(38887861-38887906)
chr3 (143-213)||(46451532-46451602)
chr3 (143-213)||(47503027-47503097)
chr3 (143-213)||(47503200-47503270)
chr3 (181-213)||(837215-837247)
chr3 (22-66)||(837269-837313)
chr3 (181-213)||(11454000-11454032)
chr3 (22-62)||(35560101-35560141)
chr3 (181-213)||(35560164-35560196)
chr3 (181-213)||(36643139-36643171)
chr3 (181-213)||(37760559-37760591)
chr3 (181-213)||(38887377-38887409)
chr3 (22-66)||(46451248-46451292)
[»] chr4 (42 HSPs)
chr4 (22-66)||(7796781-7796825)
chr4 (22-66)||(8397808-8397852)
chr4 (22-67)||(53144911-53144956)
chr4 (22-66)||(7821515-7821559)
chr4 (22-66)||(15456288-15456332)
chr4 (22-66)||(15463672-15463716)
chr4 (22-66)||(22292894-22292938)
chr4 (22-66)||(24046061-24046105)
chr4 (22-66)||(28379827-28379871)
chr4 (22-66)||(28380037-28380081)
chr4 (22-66)||(44500668-44500712)
chr4 (22-66)||(47768948-47768992)
chr4 (22-65)||(23952570-23952613)
chr4 (22-64)||(7821301-7821343)
chr4 (22-63)||(2526940-2526981)
chr4 (22-63)||(23952846-23952887)
chr4 (22-67)||(24049560-24049605)
chr4 (22-66)||(8079452-8079496)
chr4 (22-66)||(36639341-36639385)
chr4 (22-66)||(48076186-48076230)
chr4 (22-66)||(48076364-48076408)
chr4 (22-66)||(48076541-48076585)
chr4 (22-65)||(23952618-23952661)
chr4 (22-65)||(54653715-54653758)
chr4 (22-64)||(29967177-29967219)
chr4 (22-63)||(47631359-47631400)
chr4 (22-63)||(47631538-47631579)
chr4 (181-213)||(4941740-4941772)
chr4 (181-213)||(8079357-8079389)
chr4 (181-213)||(8118443-8118475)
chr4 (181-213)||(21581288-21581320)
chr4 (181-213)||(22292960-22292992)
chr4 (181-213)||(23952516-23952548)
chr4 (22-62)||(23952666-23952706)
chr4 (181-213)||(28379984-28380016)
chr4 (181-213)||(36639234-36639266)
chr4 (181-213)||(43161752-43161784)
chr4 (22-66)||(43161806-43161850)
chr4 (22-66)||(47428307-47428351)
chr4 (181-213)||(47631600-47631632)
chr4 (181-213)||(48076252-48076284)
chr4 (181-213)||(48076430-48076462)
[»] chr2 (36 HSPs)
chr2 (22-66)||(28611874-28611918)
chr2 (22-65)||(10129563-10129606)
chr2 (22-66)||(3249648-3249692)
chr2 (22-66)||(5001587-5001631)
chr2 (22-66)||(28612935-28612979)
chr2 (22-66)||(37131553-37131597)
chr2 (22-62)||(44256473-44256513)
chr2 (24-67)||(12898018-12898061)
chr2 (27-66)||(44543574-44543613)
chr2 (22-67)||(3249865-3249910)
chr2 (22-63)||(28612087-28612128)
chr2 (22-66)||(627533-627577)
chr2 (26-66)||(6348068-6348108)
chr2 (181-213)||(10129509-10129541)
chr2 (22-66)||(11735906-11735949)
chr2 (82-122)||(14336160-14336200)
chr2 (22-66)||(29550129-29550173)
chr2 (31-66)||(5001268-5001303)
chr2 (31-66)||(5012938-5012973)
chr2 (22-61)||(5013262-5013301)
chr2 (22-68)||(17930545-17930591)
chr2 (22-64)||(44543781-44543823)
chr2 (22-63)||(2132269-2132310)
chr2 (143-213)||(28612207-28612277)
chr2 (181-213)||(5001711-5001743)
chr2 (181-213)||(12896438-12896470)
chr2 (181-213)||(19640369-19640401)
chr2 (181-213)||(19838962-19838994)
chr2 (22-66)||(28612299-28612343)
chr2 (22-66)||(28612512-28612555)
chr2 (181-213)||(28612669-28612701)
chr2 (22-66)||(28612722-28612765)
chr2 (181-213)||(29549853-29549885)
chr2 (22-66)||(29549954-29549998)
chr2 (181-213)||(41995765-41995797)
chr2 (26-66)||(44543996-44544036)
[»] chr1 (58 HSPs)
chr1 (22-66)||(5428524-5428568)
chr1 (22-66)||(42492231-42492275)
chr1 (22-66)||(47790692-47790736)
chr1 (22-67)||(38684010-38684055)
chr1 (22-63)||(42496999-42497040)
chr1 (22-67)||(42497357-42497402)
chr1 (22-66)||(1647539-1647583)
chr1 (22-66)||(16165752-16165796)
chr1 (22-66)||(30083974-30084018)
chr1 (22-62)||(44262664-44262704)
chr1 (22-66)||(51113902-51113946)
chr1 (22-71)||(5429039-5429088)
chr1 (22-63)||(18912326-18912367)
chr1 (22-67)||(27296157-27296202)
chr1 (22-63)||(44263088-44263129)
chr1 (22-67)||(51113718-51113763)
chr1 (22-67)||(52740695-52740740)
chr1 (22-63)||(52740914-52740955)
chr1 (22-66)||(318551-318595)
chr1 (22-66)||(3227288-3227332)
chr1 (22-66)||(5428929-5428973)
chr1 (22-66)||(23483673-23483717)
chr1 (181-213)||(27296224-27296256)
chr1 (22-66)||(27296333-27296377)
chr1 (22-66)||(28950053-28950097)
chr1 (181-213)||(44099682-44099714)
chr1 (22-66)||(44263306-44263350)
chr1 (22-58)||(45417705-45417741)
chr1 (22-66)||(51114086-51114130)
chr1 (181-213)||(51272504-51272536)
chr1 (22-61)||(4100652-4100691)
chr1 (22-65)||(28950325-28950368)
chr1 (23-66)||(42492296-42492339)
chr1 (22-64)||(51272558-51272600)
chr1 (143-213)||(318617-318687)
chr1 (184-213)||(28950274-28950303)
chr1 (26-63)||(42497538-42497575)
chr1 (143-213)||(44263151-44263221)
chr1 (22-67)||(48552892-48552937)
chr1 (22-67)||(48553001-48553046)
chr1 (181-213)||(1156077-1156109)
chr1 (181-213)||(3227235-3227267)
chr1 (181-213)||(5428590-5428622)
chr1 (181-213)||(5429114-5429146)
chr1 (26-66)||(6537500-6537540)
chr1 (181-213)||(6537667-6537699)
chr1 (26-58)||(6537725-6537757)
chr1 (181-213)||(16165698-16165730)
chr1 (22-62)||(18912215-18912255)
chr1 (181-213)||(21617818-21617850)
chr1 (181-213)||(27296399-27296431)
chr1 (181-213)||(42492177-42492209)
chr1 (181-213)||(42497303-42497335)
chr1 (181-213)||(44263372-44263404)
chr1 (181-213)||(45417612-45417644)
chr1 (26-66)||(49483932-49483972)
chr1 (181-213)||(51113968-51114000)
chr1 (181-213)||(51114152-51114184)
[»] scaffold0018 (3 HSPs)
scaffold0018 (23-66)||(163869-163912)
scaffold0018 (181-213)||(163814-163846)
scaffold0018 (22-66)||(163233-163277)
[»] scaffold0294 (1 HSPs)
scaffold0294 (22-66)||(12451-12495)
[»] chr5 (40 HSPs)
chr5 (22-66)||(7673105-7673149)
chr5 (22-66)||(11313975-11314019)
chr5 (22-66)||(16528955-16528999)
chr5 (22-66)||(16529131-16529175)
chr5 (22-66)||(19121903-19121947)
chr5 (22-66)||(31487149-31487193)
chr5 (23-67)||(38109881-38109925)
chr5 (22-66)||(41092955-41092999)
chr5 (22-66)||(41093135-41093179)
chr5 (23-66)||(35159700-35159743)
chr5 (22-67)||(9488135-9488180)
chr5 (22-67)||(26523225-26523270)
chr5 (22-66)||(7127555-7127599)
chr5 (22-62)||(7673285-7673325)
chr5 (22-62)||(12442218-12442258)
chr5 (22-66)||(19122239-19122283)
chr5 (22-66)||(22431581-22431625)
chr5 (22-66)||(23138028-23138072)
chr5 (22-66)||(24351537-24351581)
chr5 (22-66)||(26523321-26523365)
chr5 (22-62)||(38268880-38268920)
chr5 (143-213)||(11314042-11314112)
chr5 (143-213)||(43394927-43394997)
chr5 (181-213)||(7673230-7673262)
chr5 (181-213)||(11313702-11313734)
chr5 (181-213)||(11313864-11313896)
chr5 (181-213)||(12442164-12442196)
chr5 (26-62)||(14166253-14166289)
chr5 (22-66)||(14854328-14854372)
chr5 (181-213)||(16305408-16305440)
chr5 (181-213)||(16526260-16526292)
chr5 (181-213)||(16528662-16528694)
chr5 (181-213)||(16529019-16529051)
chr5 (82-122)||(23140958-23140998)
chr5 (181-213)||(24350930-24350962)
chr5 (181-213)||(24351483-24351515)
chr5 (22-62)||(31486901-31486941)
chr5 (181-213)||(35159765-35159797)
chr5 (181-213)||(41092902-41092934)
chr5 (181-213)||(41093081-41093113)
[»] scaffold0432 (1 HSPs)
scaffold0432 (22-66)||(5375-5419)
[»] scaffold0504 (2 HSPs)
scaffold0504 (22-63)||(1600-1641)
scaffold0504 (181-213)||(1545-1577)
[»] scaffold0318 (1 HSPs)
scaffold0318 (22-66)||(5992-6036)
[»] scaffold0240 (1 HSPs)
scaffold0240 (22-66)||(13088-13132)


Alignment Details
Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 33198643 - 33198598
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  33198643 ttaggttaaattactgctgacctaacaaaattaataaataaggatt 33198598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 1197918 - 1197874
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  1197918 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 1197874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 23828193 - 23828239
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattc 68  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  23828193 ttaggttaaattgctgcagacctaacaaaattaataaataagaattc 23828239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 23838202 - 23838248
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattc 68  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23838202 ttaggttaaattgttgcagacctaacaaaattaataaataaggattc 23838248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 33198873 - 33198833
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  33198873 ttaggttaaattgctgcagacctaacaaaattaataaataa 33198833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 34345184 - 34345140
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||    
T  34345184 ttaggttaaattgctgcagacctaataaaattaataaataaggat 34345140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37197794 - 37197838
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  37197794 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 37197838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37197978 - 37198022
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  37197978 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 37198022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 23831011 - 23831057
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattc 68  Q
    |||||||||||| ||||  ||||||||||||||||||||||||||||    
T  23831011 ttaggttaaatttctgcacacctaacaaaattaataaataaggattc 23831057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 23838411 - 23838449
Alignment:
Q  24 aggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  23838411 aggttaaattgctgcagacctaacaaaattaataaataa 23838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 30439111 - 30439156
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||    
T  30439111 ttagattaaattgttgcagacctaacaaaattaataaataaggatt 30439156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 23085900 - 23085860
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  23085900 ttaggttaaattgttgcagacctaacaaaattaataaataa 23085860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 23085954 - 23085922
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  23085954 aatttattaggttaaataattgcaaacctaata 23085922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 37197877 - 37197950
Alignment:
Q  140 agaataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  37197877 agaataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 37197950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 37198125 - 37198157
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  37198125 aatttattaggttaaataattgcaaacctaata 37198157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37198364 - 37198408
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  37198364 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 37198408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 39921976 - 39922020
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  39921976 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 39922020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 39922232 - 39922276
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||    
T  39922232 ttaggttaaattgctgaagacgtaacaaaattaataaataaggat 39922276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44429264 - 44429220
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  44429264 ttaggttaagttgttgcagacctaacaaaattaataaataaggat 44429220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44434016 - 44433972
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| |||||||||||||||||||||||||||    
T  44434016 ttaggttaagttgttgcagacctaacaaaattaataaataaggat 44433972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44434193 - 44434149
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| || ||||||||||||||||||||||||    
T  44434193 ttaggttaagttgctgcagatctaacaaaattaataaataaggat 44434149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 604746 - 604785
Alignment:
Q  27 ttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  604746 ttaagttgctgcagacctaacaaaattaataaataaggat 604785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 44430457 - 44430414
Alignment:
Q  23 taggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||| ||||||| || ||||||||||||||||||||||||    
T  44430457 taggttaagttgctgcagatctaacaaaattaataaataaggat 44430414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 3990239 - 3990209
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaa 211  Q
    |||||||||||||||||||||||||||||||    
T  3990239 aatttattaggttaaataattgcaaacctaa 3990209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 213
Target Start/End: Original strand, 23830955 - 23830989
Alignment:
Q  179 gcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||| |||||||||||||||||||||||||||    
T  23830955 gcaatttgttaggttaaataattgcaaacctaata 23830989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 180 - 213
Target Start/End: Original strand, 1276534 - 1276567
Alignment:
Q  180 caatttattaggttaaataattgcaaacctaata 213  Q
    |||||| |||||||||||||||||||||||||||    
T  1276534 caatttgttaggttaaataattgcaaacctaata 1276567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 27853644 - 27853714
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  27853644 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 27853714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 42045676 - 42045632
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||    
T  42045676 ttaggttaaattgctgcagacgtaacaaaatt-ataaataaggatt 42045632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 44430281 - 44430240
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  44430281 ttaggttaagttgttgcagacctaacaaaattaataaataag 44430240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 604394 - 604438
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||| | || ||||||||||||||||||||||||    
T  604394 ttaggttaagttgctacagatctaacaaaattaataaataaggat 604438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 2084916 - 2084872
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||| |||||||  ||||||||||||||||||||||||||    
T  2084916 ttagattaagttgctgcaaacctaacaaaattaataaataaggat 2084872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 3459205 - 3459245
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  3459205 gttaaattgctgcagacgtaacaaaattagtaaataaggat 3459245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 14683203 - 14683159
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| ||   |||||||||||||||||||||||||||    
T  14683203 ttaggttaaattactctagacctaacaaaattaataaataaggat 14683159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 23828139 - 23828171
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  23828139 aatttgttaggttaaataattgcaaacctaata 23828171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 23828259 - 23828299
Alignment:
Q  82 ggcaacaagatatgaatgaaataaaagtatgaaattggttc 122  Q
    ||||||| |||| |||||||||||||| |||||||||||||    
T  23828259 ggcaacaggataggaatgaaataaaagcatgaaattggttc 23828299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 23960651 - 23960691
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| |||||||||||||||||||||||    
T  23960651 gttaaattgttgcagacgtaacaaaattaataaataaggat 23960691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 23960865 - 23960905
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||| ||||||||||| |||||||    
T  23960865 ttaggttaaattgctgcagacgtaacaaaattattaaataa 23960905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 30439054 - 30439086
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  30439054 aatttgttaggttaaataattgcaaacctaata 30439086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 32062911 - 32062879
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  32062911 aatttgttaggttaaataattgcaaacctaata 32062879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 35617776 - 35617744
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  35617776 aatttgttaggttaaataattgcaaacctaata 35617744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37197743 - 37197783
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  37197743 ttaggttaaattgctgcagaggtaacaaaattaataaataa 37197783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 37198180 - 37198220
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||| |||||||||||| ||||||    
T  37198180 ttaggttaaattgctgcagacgtaacaaaattaaaaaataa 37198220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 37410084 - 37410116
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  37410084 aatttgttaggttaaataattgcaaacctaata 37410116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 39922100 - 39922132
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  39922100 aatttgttaggttaaataattgcaaacctaata 39922132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44430103 - 44430063
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  44430103 gttaagttgttgcagacctaacaaaattaataaataaggat 44430063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 44433838 - 44433798
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||| ||| ||| |||||||||||||||||||||||||||    
T  44433838 gttaagttgttgcagacctaacaaaattaataaataaggat 44433798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 34837227 - 34837182
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  34837227 ttaggttaaattgctgcagacctaacaaaattaataaataaggatt 34837182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21224178 - 21224134
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  21224178 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 21224134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 40450166 - 40450210
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  40450166 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 40450210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 4680961 - 4681006
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  4680961 ttaggttaaattgctgcagacgtaacaaaattaataaataaggatt 4681006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 16492613 - 16492654
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  16492613 gttaaattgctgcagacctaacaaaattaataaataaggatt 16492654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 18486674 - 18486629
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  18486674 ttaggttaaattgctgcaaacctaacaaaattaataaataaggatt 18486629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 21128080 - 21128035
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||    
T  21128080 ttaggttaaactgctgcagacctaacaaaattaataaataaggatt 21128035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 2527019 - 2527059
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  2527019 ttaggttaaattgctgcagacctaacaaaattaataaataa 2527059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 9142026 - 9142070
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  9142026 ttaggttaaattgctgcagacataacaaaattaataaataaggat 9142070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11646667 - 11646623
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  11646667 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 11646623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11650073 - 11650117
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  11650073 ttaggttaaattgttgcagacctaacaaaattaataaataaggat 11650117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12140926 - 12140970
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  12140926 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 12140970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19222145 - 19222101
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  19222145 ttaggttaaattgctgcagaactaacaaaattaataaataaggat 19222101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 22324324 - 22324284
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  22324324 ttaggttaaattgctgcagacctaacaaaattaataaataa 22324284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 34837428 - 34837384
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  34837428 ttaggttaaattgttgcagacctaacaaaattaataaataaggat 34837384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 48640866 - 48640910
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||    
T  48640866 ttaggttaaattgctgcagaccttacaaaattaataaataaggat 48640910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 45419701 - 45419743
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  45419701 ttaggttaaattactgcagacctaacaaaattaataaataagg 45419743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 2354734 - 2354771
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  2354734 gttaaattgctgcagacctaacaaaattaataaataag 2354771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 4455407 - 4455362
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  4455407 ttaggttaaattgttgcagacctaataaaattaataaataaggatt 4455362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 16671279 - 16671242
Alignment:
Q  29 aaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16671279 aaattgctgcagacctaacaaaattaataaataaggat 16671242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 17645647 - 17645610
Alignment:
Q  29 aaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17645647 aaattgctgcagacctaacaaaattaataaataaggat 17645610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 34988945 - 34988990
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  34988945 ttaggttaagttgctgcagacctaataaaattaataaataaggatt 34988990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 6249880 - 6249836
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||    
T  6249880 ttaggttaaaacgctgcagacctaacaaaattaataaataaggat 6249836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 9142198 - 9142242
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||    
T  9142198 ttaggttaaattattgcagacctaacaaaattaataaataaggat 9142242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 22773975 - 22774019
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  22773975 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 22774019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23591479 - 23591523
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  23591479 ttaggttaaattgttgcagatctaacaaaattaataaataaggat 23591523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27716374 - 27716418
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||   |||||||||||||||||||||||||||    
T  27716374 ttaggttaaattgctagagacctaacaaaattaataaataaggat 27716418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27716596 - 27716640
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||   ||||||||||||||||||||||||||    
T  27716596 ttaggttaaattgctgaaaacctaacaaaattaataaataaggat 27716640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 32278201 - 32278245
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| ||||| |||||||||||||||||    
T  32278201 ttaggttaaattgctgcagacgtaacataattaataaataaggat 32278245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 34837695 - 34837651
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||    
T  34837695 ttaggttaaattgctgcatacctaacaaaactaataaataaggat 34837651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 48641085 - 48641125
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||| | |||||||||||||||||||||||||||    
T  48641085 gttaaattgctacagacctaacaaaattaataaataaggat 48641125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 4681663 - 4681700
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  4681663 gttaaattgctgcagacgtaacaaaattaataaataag 4681700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 12140834 - 12140904
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  12140834 ataggaatgaaattggtgcgatgcattcttttagatgaaatttgttaggttaaataattgcaaacctaata 12140904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 16377689 - 16377734
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||  |||||| ||||||| ||||||||||||||||||||    
T  16377689 ttaggttaagatgctgcagacctaataaaattaataaataaggatt 16377734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 16671737 - 16671667
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  16671737 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 16671667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 17646105 - 17646035
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  17646105 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 17646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 18486766 - 18486696
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||| ||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  18486766 ataggaatgaaattggtatgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaata 18486696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 23591387 - 23591457
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  23591387 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 23591457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 35124857 - 35124787
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  35124857 ataggaatgaaattggtgcgatgcatttttttagacggaatttgttaggttaaataattgcaaacctaata 35124787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 1566519 - 1566551
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  1566519 aatttgttaggttaaataattgcaaacctaata 1566551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 2853228 - 2853260
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  2853228 aatttgttaggttaaataattgcaaacctaata 2853260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 4454964 - 4454920
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||    
T  4454964 ttaggttaagttgttgcagacctaataaaattaataaataaggat 4454920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 4680907 - 4680939
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  4680907 aatttgttaggttaaataattgcaaacctaata 4680939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 4681156 - 4681188
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||||||||||||| |||||    
T  4681156 aatttattaggttaaataattgcaaacataata 4681188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 9141972 - 9142004
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  9141972 aatttgttaggttaaataattgcaaacctaata 9142004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11645996 - 11646040
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| ||| |||||||||||||||||||||||    
T  11645996 ttaggttaagttgttgcagacgtaacaaaattaataaataaggat 11646040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 11646408 - 11646440
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  11646408 aatttgttaggttaaataattgcaaacctaata 11646440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 11646462 - 11646506
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||| ||||||| ||| |||||||||||||||||||||||    
T  11646462 ttagattaagttgctgcagacgtaacaaaattaataaataaggat 11646506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 11650019 - 11650051
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  11650019 aatttgttaggttaaataattgcaaacctaata 11650051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 16671340 - 16671308
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  16671340 aatttgttaggttaaataattgcaaacctaata 16671308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 17645708 - 17645676
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  17645708 aatttgttaggttaaataattgcaaacctaata 17645676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 18487245 - 18487213
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  18487245 aatttgttaggttaaataattgcaaacctaata 18487213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 23591642 - 23591674
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  23591642 aatttgttaggttaaataattgcaaacctaata 23591674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 27716320 - 27716352
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  27716320 aatttgttaggttaaataattgcaaacctaata 27716352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38694875 - 38694919
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| ||||||| ||| |||||||||||||||    
T  38694875 ttaggttaagttgctgcagacctaataaacttaataaataaggat 38694919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 40686903 - 40686935
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  40686903 aatttgttaggttaaataattgcaaacctaata 40686935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 45285693 - 45285649
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| |||| ||||||| |||||||||||| ||||||    
T  45285693 ttaggttaaatttctgcggacctaataaaattaataaacaaggat 45285649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 45419647 - 45419679
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  45419647 aatttgttaggttaaataattgcaaacctaata 45419679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 46264294 - 46264326
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  46264294 aatttgttaggttaaataattgcaaacctaata 46264326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 48640812 - 48640844
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  48640812 aatttgttaggttaaataattgcaaacctaata 48640844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 4100384 - 4100429
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  4100384 ttaggttaaattgctgcagacctaacaaaattaataaataaggatt 4100429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 4125715 - 4125760
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  4125715 ttaggttaaattgctgcagacctaacaaaattaataaataaggatt 4125760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29201598 - 29201554
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  29201598 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 29201554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17200026 - 17199981
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  17200026 ttaggttaaattgctacagacctaacaaaattaataaataaggatt 17199981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 17906866 - 17906911
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  17906866 ttaggttaaattgctgcaaacctaacaaaattaataaataaggatt 17906911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 17202890 - 17202846
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||    
T  17202890 ttaggttaaattgctgcagacctaacaaaatttataaataaggat 17202846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23610472 - 23610428
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  23610472 ttaggttaaattgttgcagacctaacaaaattaataaataaggat 23610428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 25068228 - 25068186
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    ||||||||||||||||| ||| |||||||||||||||||||||    
T  25068228 ttaggttaaattgctgcagacgtaacaaaattaataaataagg 25068186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 4811128 - 4811173
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||    
T  4811128 ttaggttaaattgctgcagacgtaacaaaataaataaataaggatt 4811173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17200364 - 17200319
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  17200364 ttaggttaagttgctgcagacctaataaaattaataaataaggatt 17200319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 27579638 - 27579593
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||    
T  27579638 ttaggttaaattgttgcagaccgaacaaaattaataaataaggatt 27579593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 808508 - 808468
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  808508 gttaaattgctgcagaactaacaaaattaataaataaggat 808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 808733 - 808689
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||| || ||| |||||||||||||||||||||||    
T  808733 ttaggttaaattgcagcagacataacaaaattaataaataaggat 808689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 808869 - 808829
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  808869 ttaggttaaattgctgcagacctaacaaaattaatagataa 808829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 17010952 - 17010912
Alignment:
Q  27 ttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  17010952 ttaaattgctgcagacttaacaaaattaataaataaggatt 17010912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 17201637 - 17201593
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  17201637 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 17201593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 17201856 - 17201812
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||    
T  17201856 ttaggttaaattgctgcatacctaacaaaatttataaataaggat 17201812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19121209 - 19121165
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| || ||||||||||||||||||||||||    
T  19121209 ttagattaaattgctgcagatctaacaaaattaataaataaggat 19121165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23622258 - 23622214
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||  ||| |||||||||||||||||||||||||||    
T  23622258 ttaggttaaattattgcagacctaacaaaattaataaataaggat 23622214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 24223590 - 24223634
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||    
T  24223590 ttaggttaagttgctgcagacctaataaaattaataaataaggat 24223634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Complemental strand, 12295971 - 12295925
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattc 68  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||||    
T  12295971 ttaggttaagttgttgcagacctaataaaattaataaataaggattc 12295925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 9829051 - 9828981
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  9829051 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 9828981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17011065 - 17011020
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| ||||||| ||| |||||||||||||||||| |||||    
T  17011065 ttaggttaagttgctgcagacttaacaaaattaataaatatggatt 17011020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 25068002 - 25067957
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||  |||||||||||| |||||||||||    
T  25068002 ttaggttaaattgctgcagatgtaacaaaattaacaaataaggatt 25067957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 27315327 - 27315282
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| ||||||| |||| |||||||||||||||||| ||||    
T  27315327 ttaggttaagttgctgcagaccgaacaaaattaataaataaagatt 27315282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 16799577 - 16799621
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||| | ||||||| ||||||| |||||||||||||||||||    
T  16799577 ttaggttcagttgctgcagacctaataaaattaataaataaggat 16799621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 17201691 - 17201659
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  17201691 aatttgttaggttaaataattgcaaacctaata 17201659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 23622312 - 23622280
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  23622312 aatttgttaggttaaataattgcaaacctaata 23622280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 27315380 - 27315348
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  27315380 aatttgttaggttaaataattgcaaacctaata 27315348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 27579692 - 27579660
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  27579692 aatttgttaggttaaataattgcaaacctaata 27579660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 32208473 - 32208517
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||| ||| |||||| ||||||||||||||||||||    
T  32208473 ttagattaaattgttgcagacctagcaaaattaataaataaggat 32208517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 34294381 - 34294341
Alignment:
Q  82 ggcaacaagatatgaatgaaataaaagtatgaaattggttc 122  Q
    |||||||||||| |||||||||||| | |||||||||||||    
T  34294381 ggcaacaagataggaatgaaataaaggcatgaaattggttc 34294341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 3847865 - 3847820
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  3847865 ttaggttaaattgctgcagacctaacaaaattaataaataaggatt 3847820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38887431 - 38887475
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  38887431 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 38887475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 18094777 - 18094736
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  18094777 gttaaattgctgcagacctaacaaaattaataaataaggatt 18094736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 18094996 - 18094953
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  18094996 ttaggttaaattgatgcagacctaacaaaattaataaataagga 18094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 47503119 - 47503162
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  47503119 ttaggttaaattgctgcagacgtaacaaaattaataaataagga 47503162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 53047657 - 53047700
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggattca 69  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||    
T  53047657 gttaaattgctgcagacctaacaaaattaataaataaagattca 53047700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 60
Target Start/End: Complemental strand, 43819368 - 43819330
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaat 60  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  43819368 ttaggttaaattgctgcagacctaacaaaattaataaat 43819330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 11220817 - 11220780
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaa 59  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  11220817 ttaggttaaattgctgcagacctaacaaaattaataaa 11220780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 17755776 - 17755731
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  17755776 ttaggttaaattgctgcggacctaataaaattaataaataaagatt 17755731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 19057096 - 19057051
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  19057096 ttaggttaaattgctgcggacctaataaaattaataaataaagatt 19057051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 36643193 - 36643238
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||||  || ||||||||||||||||||||||||    
T  36643193 ttaggttaaattgctgcatacgtaacaaaattaataaataaggatt 36643238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11454245 - 11454201
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  11454245 ttaggttaaattgttgcagacataacaaaattaataaataaggat 11454201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11522572 - 11522528
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||  |||||||||||||||||||||||||||    
T  11522572 ttaggttaaattgttgtagacctaacaaaattaataaataaggat 11522528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 21969072 - 21969116
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||    
T  21969072 ttagattaaattgctgctgacctaataaaattaataaatacggat 21969116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 21991508 - 21991552
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||||||||||| |||||||||||||| ||||    
T  21991508 ttagattaaattgctgctgacctaataaaattaataaatacggat 21991552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 38887646 - 38887686
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  38887646 ttaggttaaattgctgcagacctaataaaattaataaataa 38887686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 40050890 - 40050846
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| || |||||||||| |||||||||||||    
T  40050890 ttaggttaaattgctgcagaactaacaaaataaataaataaggat 40050846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 43017311 - 43017267
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||    
T  43017311 ttaggttaaattgctgcagacgtaacaaaattaataaatgaggat 43017267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 45514484 - 45514528
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||    
T  45514484 ttagattaaattgctgcagacgtaacaaaattaataaataaggat 45514528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 46451510 - 46451466
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| |||| ||| |||||||||||||||||||||||    
T  46451510 ttaggttaaattactgcagacgtaacaaaattaataaataaggat 46451466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 38887584 - 38887622
Alignment:
Q  175 agaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  38887584 agaaggaatttgttaggttaaataattgcaaacctaata 38887622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11454603 - 11454558
Alignment:
Q  22 ttaggttaaattgctgctgacctaac-aaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||    
T  11454603 ttaggttaaattgctgcagacgtaacaaaaattaataaataaggat 11454558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 20877282 - 20877323
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    |||| |||||||||||| ||| ||||||||||||||||||||    
T  20877282 ttagattaaattgctgcagacgtaacaaaattaataaataag 20877323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 38887861 - 38887906
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||| |||| ||||| | ||||||||||||||||||||    
T  38887861 ttaggttaaattactgcagacctgataaaattaataaataaggatt 38887906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 46451602 - 46451532
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  46451602 ataggaatgaaattggtgcgatgcattattttagatggaatttgttaggttaaataattgcaaacctaata 46451532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 47503027 - 47503097
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  47503027 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaata 47503097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 47503200 - 47503270
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  47503200 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaata 47503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 837215 - 837247
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  837215 aatttgttaggttaaataattgcaaacctaata 837247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 837269 - 837313
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  837269 ttaggttaaattgttgcagacataataaaattaataaataaggat 837313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 11454032 - 11454000
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  11454032 aatttgttaggttaaataattgcaaacctaata 11454000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 35560141 - 35560101
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  35560141 ttaggttaaattgctgcagaagtaacaaaattaataaataa 35560101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 35560196 - 35560164
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  35560196 aatttgttaggttaaataattgcaaacctaata 35560164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 36643139 - 36643171
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  36643139 aatttgttaggttaaataattgcaaacctaata 36643171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 37760591 - 37760559
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  37760591 aatttgttaggttaaataattgcaaacctaata 37760559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 38887377 - 38887409
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  38887377 aatttgttaggttaaataattgcaaacctaata 38887409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 46451292 - 46451248
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||  ||| |||||||||||||||||||||||    
T  46451292 ttaggttaaattgttggagacgtaacaaaattaataaataaggat 46451248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7796825 - 7796781
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  7796825 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 7796781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 8397808 - 8397852
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  8397808 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 8397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 53144911 - 53144956
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| || |||||||||||||||||||||||||    
T  53144911 ttaggttaaattgctgcagatctaacaaaattaataaataaggatt 53144956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7821559 - 7821515
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  7821559 ttaggttaaattgctccagacctaacaaaattaataaataaggat 7821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 15456332 - 15456288
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  15456332 ttaggttaaattgctgcagacctaacaaaattaataaacaaggat 15456288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 15463716 - 15463672
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  15463716 ttaggttaaattgctgcagacctaacaaaattaataaacaaggat 15463672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22292938 - 22292894
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  22292938 ttaggttaaattgctgcagacctagcaaaattaataaataaggat 22292894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 24046105 - 24046061
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  24046105 ttaggttaaattgctgcacacctaacaaaattaataaataaggat 24046061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28379827 - 28379871
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  28379827 ttaggttaaattgatgcagacctaacaaaattaataaataaggat 28379871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28380037 - 28380081
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  28380037 ttaggttaaattggtgcagacctaacaaaattaataaataaggat 28380081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44500712 - 44500668
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  44500712 ttaggttaaattgctgcagacctaacaaaattaataaacaaggat 44500668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 47768992 - 47768948
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  47768992 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 47768948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 23952570 - 23952613
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||    
T  23952570 ttaggttaaattgctgcagacgtaacaaaattaataaataagga 23952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 7821343 - 7821301
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  7821343 ttaggttaaattgctgcatacctaacaaaattaataaataagg 7821301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 2526981 - 2526940
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  2526981 ttaggttaaattgctgcagacctaccaaaattaataaataag 2526940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 23952846 - 23952887
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  23952846 ttaggttaaattgctgcagacgtaacaaaattaataaataag 23952887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 24049605 - 24049560
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| |||  |||||||||||||||||||||||||||    
T  24049605 ttaggttaaattgatgcacacctaacaaaattaataaataaggatt 24049560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 8079496 - 8079452
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||| |||||| ||| |||||||||||||||||||||||    
T  8079496 ttaggttaaactgctgcagacgtaacaaaattaataaataaggat 8079452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 36639385 - 36639341
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||    
T  36639385 ttaggttaaattgctgcaaacctaacaaaattaatatataaggat 36639341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48076230 - 48076186
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||    
T  48076230 ttagattaaattgctgcagacgtaacaaaattaataaataaggat 48076186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48076408 - 48076364
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||||    
T  48076408 ttaggttaaattgctgcagacgtaacaaaattaataaagaaggat 48076364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 48076585 - 48076541
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  || |||||||||||||||||||||||    
T  48076585 ttaggttaaattgctgcaaacgtaacaaaattaataaataaggat 48076541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 23952618 - 23952661
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    |||||||||||| |||| ||| ||||||||||||||||||||||    
T  23952618 ttaggttaaattactgcagacgtaacaaaattaataaataagga 23952661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 54653715 - 54653758
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||    
T  54653715 ttaggttaaattgatgcagacgtaacaaaattaataaataagga 54653758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 29967219 - 29967177
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    ||||||||| |||||||  ||||||||||||||||||||||||    
T  29967219 ttaggttaagttgctgcaaacctaacaaaattaataaataagg 29967177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 47631400 - 47631359
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| |||  |||||||||||||||||||||||    
T  47631400 ttaggttaaattgatgcatacctaacaaaattaataaataag 47631359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 47631579 - 47631538
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||    
T  47631579 ttaggttaaattgatgcagacctgacaaaattaataaataag 47631538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 4941772 - 4941740
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  4941772 aatttgttaggttaaataattgcaaacctaata 4941740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 8079389 - 8079357
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  8079389 aatttgttaggttaaataattgcaaacctaata 8079357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 8118475 - 8118443
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  8118475 aatttgttaggttaaataattgcaaacctaata 8118443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 21581288 - 21581320
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  21581288 aatttgttaggttaaataattgcaaacctaata 21581320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 22292992 - 22292960
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  22292992 aatttgttaggttaaataattgcaaacctaata 22292960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 23952516 - 23952548
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  23952516 aattttttaggttaaataattgcaaacctaata 23952548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 23952666 - 23952706
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    |||||||||||| |||| ||| |||||||||||||||||||    
T  23952666 ttaggttaaattactgcagacgtaacaaaattaataaataa 23952706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 28379984 - 28380016
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  28379984 aatttgttaggttaaataattgcaaacctaata 28380016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 36639266 - 36639234
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  36639266 aatttgttaggttaaataattgcaaacctaata 36639234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 43161752 - 43161784
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  43161752 aatttgttaggttaaataattgcaaacctaata 43161784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 43161806 - 43161850
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||| ||||||||||||||||    
T  43161806 ttaggttaaattgttgcagacgtaacaagattaataaataaggat 43161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 47428307 - 47428351
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||  || ||||||||||||||||||||||||    
T  47428307 ttaggttaaattgttgtagatctaacaaaattaataaataaggat 47428351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 47631632 - 47631600
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  47631632 aatttgttaggttaaataattgcaaacctaata 47631600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 48076284 - 48076252
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  48076284 aatttgttaggttaaataattgcaaacctaata 48076252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 48076462 - 48076430
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  48076462 aatttgttaggttaaataattgcaaacctaata 48076430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28611874 - 28611918
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  28611874 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 28611918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 10129563 - 10129606
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  10129563 ttaggttaaattgctgcagacctaacaaaattaataaataagga 10129606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 3249648 - 3249692
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  3249648 ttagcttaaattgctgcagacctaacaaaattaataaataaggat 3249692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 5001587 - 5001631
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  5001587 ttagtttaaattgctgcagacctaacaaaattaataaataaggat 5001631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28612935 - 28612979
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  28612935 ttaggttaaattgttgcagacctaacaaaattaataaataaggat 28612979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 37131553 - 37131597
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| || ||||||||||||||||||||||||    
T  37131553 ttaggttaaattgctgcagatctaacaaaattaataaataaggat 37131597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 44256513 - 44256473
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44256513 ttaggttaaattgctgcagacctaacaaaattaataaataa 44256473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 12898061 - 12898018
Alignment:
Q  24 aggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  12898061 aggttaaattgctgcagatctaacaaaattaataaataaggatt 12898018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Original strand, 44543574 - 44543613
Alignment:
Q  27 ttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  44543574 ttaaattgctgcagacctaacaaaattaataaataaggat 44543613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 3249865 - 3249910
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| || |||||||||||||||||||||||||    
T  3249865 ttaggttaaattgttgcagatctaacaaaattaataaataaggatt 3249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 28612087 - 28612128
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  28612087 ttaggttaaattgttgcagacctaacaaaattaataaataag 28612128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 627577 - 627533
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  || |||||||||||||||||||||||    
T  627577 ttaggttaaattgctgcaaacgtaacaaaattaataaataaggat 627533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 6348108 - 6348068
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  6348108 gttaaattgctgcagacgtaacaaaattaataaataaggat 6348068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 10129509 - 10129541
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  10129509 aatttattaggttaaataattgcaaacctaata 10129541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11735949 - 11735906
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  11735949 ttaggttaaattgctgca-acctaacaaaattaataaataaggat 11735906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 14336160 - 14336200
Alignment:
Q  82 ggcaacaagatatgaatgaaataaaagtatgaaattggttc 122  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  14336160 ggcaacaagatatgaatgaaataaaggcatgaaattggttc 14336200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29550173 - 29550129
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||||    
T  29550173 ttaggttaaattgttgcagacctaataaaattaataaataaggat 29550129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 5001268 - 5001303
Alignment:
Q  31 attgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||| |||||||||||||||||||||||||||    
T  5001268 attgctgcagacctaacaaaattaataaataaggat 5001303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Original strand, 5012938 - 5012973
Alignment:
Q  31 attgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||| |||||||||||||||||||||||||||    
T  5012938 attgctgcagacctaacaaaattaataaataaggat 5012973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 5013262 - 5013301
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaata 61  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  5013262 ttaggttaaattgctgcagacgtaacaaaattaataaata 5013301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 17930545 - 17930591
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattc 68  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||||||||    
T  17930545 ttaggttaagttgttgcagacctaataaaattaataaataaggattc 17930591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 44543781 - 44543823
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||    
T  44543781 ttaggttaaattgttgcggacgtaacaaaattaataaataagg 44543823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 2132269 - 2132310
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||    
T  2132269 ttaggttaaattgttgcagacctaacaaacttaataaataag 2132310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 28612207 - 28612277
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  28612207 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 28612277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 5001711 - 5001743
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  5001711 aatttgttaggttaaataattgcaaacctaata 5001743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 12896438 - 12896470
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||| ||||||||||||||||||||||    
T  12896438 aatttattagattaaataattgcaaacctaata 12896470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 19640401 - 19640369
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||| ||||    
T  19640401 aatttattaggttaaataattgcaaacccaata 19640369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 19838994 - 19838962
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||| ||||    
T  19838994 aatttattaggttaaataattgcaaacccaata 19838962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28612299 - 28612343
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| |||  | ||||||||||||||||||||||||    
T  28612299 ttaggttaaattgatgcaaaactaacaaaattaataaataaggat 28612343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28612512 - 28612555
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||    
T  28612512 ttaggttaaattgttgcag-cctaacaaaattaataaataaggat 28612555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 28612669 - 28612701
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  28612669 aatttgttaggttaaataattgcaaacctaata 28612701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28612722 - 28612765
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||    
T  28612722 ttaggttaaattgttgcag-cctaacaaaattaataaataaggat 28612765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 29549885 - 29549853
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||| ||||||||||    
T  29549885 aatttattaggttaaataattgtaaacctaata 29549853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29549998 - 29549954
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||  ||| ||||||||||||||||||||| |||||    
T  29549998 ttaggttaaattagtgcagacctaacaaaattaataaatgaggat 29549954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 41995765 - 41995797
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  41995765 aatttgttaggttaaataattgcaaacctaata 41995797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 44543996 - 44544036
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||| ||| |||||||||||||||||||||||    
T  44543996 gttaaattgttgcggacgtaacaaaattaataaataaggat 44544036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5428568 - 5428524
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  5428568 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 5428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 42492231 - 42492275
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  42492231 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 42492275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 47790736 - 47790692
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  47790736 ttaggttaaattgctgcagacctaacaaaattaataaataaggat 47790692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 38684055 - 38684010
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||||  |||||||||||||||||||||||||||    
T  38684055 ttaggttaaattgctgcaaacctaacaaaattaataaataaggatt 38684010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 42496999 - 42497040
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  42496999 ttaggttaaattgctgcagacctaacaaaattaataaataag 42497040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 42497357 - 42497402
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||    
T  42497357 ttaggttaaattgctgcagacctatcaaaattaataaataaggatt 42497402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 1647583 - 1647539
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||| |||||| |||||||||||||||||||||||||||    
T  1647583 ttaggttaaactgctgcagacctaacaaaattaataaataaggat 1647539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 16165752 - 16165796
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  16165752 ttaggttaaattgctacagacctaacaaaattaataaataaggat 16165796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 30084018 - 30083974
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| |||||||||||||||||||||||||||    
T  30084018 ttagattaaattgctgcggacctaacaaaattaataaataaggat 30083974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 44262704 - 44262664
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44262704 ttaggttaaattgctgcagacctaacaaaattaataaataa 44262664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 51113946 - 51113902
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  51113946 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 51113902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5429088 - 5429039
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggattcatt 71  Q
    |||||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  5429088 ttaggttaaattgctgcacacctaacaaagttaataaataaggatgcatt 5429039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 18912367 - 18912326
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  18912367 ttaggttaaattgctgcagacataacaaaattaataaataag 18912326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 27296202 - 27296157
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  27296202 ttaggttaaattgttgcagacgtaacaaaattaataaataaggatt 27296157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 44263129 - 44263088
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  44263129 ttaggttaaattgctgcagacttaacaaaattaataaataag 44263088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 51113763 - 51113718
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||||  || ||||||||||||||||||||||||    
T  51113763 ttaggttaaattgctgcaaacgtaacaaaattaataaataaggatt 51113718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 52740740 - 52740695
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||    
T  52740740 ttaggttaaattgcttcaaacctaacaaaattaataaataaggatt 52740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 52740955 - 52740914
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  52740955 ttaggttaaattgttgcagacctaacaaaattaataaataag 52740914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 318595 - 318551
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||    
T  318595 ttagattaaattgctgcagacgtaacaaaattaataaataaggat 318551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 3227288 - 3227332
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| || ||||||||||||||||||||||||    
T  3227288 ttaggttaaattgatgcagatctaacaaaattaataaataaggat 3227332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 5428973 - 5428929
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||| |||||||||||| || ||||||||||||||||||||||||    
T  5428973 ttagtttaaattgctgcagatctaacaaaattaataaataaggat 5428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23483673 - 23483717
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||    
T  23483673 ttaggttaagtagctgcagacctaacaaaattaataaataaggat 23483717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 27296256 - 27296224
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  27296256 aatttattaggttaaataattgcaaacctaata 27296224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 27296377 - 27296333
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  27296377 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 27296333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28950053 - 28950097
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  28950053 ttaggttaaattgttgcagacgtaacaaaattaataaataaggat 28950097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 44099682 - 44099714
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  44099682 aatttattaggttaaataattgcaaacctaata 44099714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44263350 - 44263306
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||    
T  44263350 ttaggttatattgatgcagacctaacaaaattaataaataaggat 44263306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 45417705 - 45417741
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataa 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45417705 ttaggttaaattgctgcagacctaacaaaattaataa 45417741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 51114130 - 51114086
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||| | ||| |||||||||||||||||||||||    
T  51114130 ttaggttaaattgctacagacgtaacaaaattaataaataaggat 51114086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 51272504 - 51272536
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  51272504 aatttattaggttaaataattgcaaacctaata 51272536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 4100652 - 4100691
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaata 61  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  4100652 ttaggttaaattactgcagacctaacaaaattaataaata 4100691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 28950325 - 28950368
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagga 65  Q
    ||||||||||||||||  ||| ||||||||||||||||||||||    
T  28950325 ttaggttaaattgctggagacgtaacaaaattaataaataagga 28950368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 42492296 - 42492339
Alignment:
Q  23 taggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||  ||| |||||||||||||||||||||||    
T  42492296 taggttaaattgctgtagacgtaacaaaattaataaataaggat 42492339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 51272558 - 51272600
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataagg 64  Q
    ||||||||||||| ||  |||||||||||||||||||||||||    
T  51272558 ttaggttaaattgttgtagacctaacaaaattaataaataagg 51272600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 318687 - 318617
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  318687 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 318617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 28950274 - 28950303
Alignment:
Q  184 ttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||||||||||||||||    
T  28950274 ttattaggttaaataattgcaaacctaata 28950303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 42497538 - 42497575
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataag 63  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  42497538 gttaaattactgcagacctaacaaaattaataaataag 42497575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 44263221 - 44263151
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  44263221 ataggaatgaaattggtgcgatgcatttttttagatggaatttgttaggttaaataattgcaaacctaata 44263151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 48552892 - 48552937
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| ||||||  ||| ||||||||||||||||||||||||    
T  48552892 ttaggttaagttgctgtagacttaacaaaattaataaataaggatt 48552937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 48553001 - 48553046
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||| |||||||  || ||||||||||||||||||||||||    
T  48553001 ttaggttaagttgctgcaaacttaacaaaattaataaataaggatt 48553046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 1156077 - 1156109
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  1156077 aatttgttaggttaaataattgcaaacctaata 1156109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 3227235 - 3227267
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  3227235 aatttgttaggttaaataattgcaaacctaata 3227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 5428622 - 5428590
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  5428622 aatttgttaggttaaataattgcaaacctaata 5428590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 5429146 - 5429114
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  5429146 aatttgttaggttaaataattgcaaacctaata 5429114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 6537500 - 6537540
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| | | |||||||||||||||||||||||||||    
T  6537500 gttaaattgttacagacctaacaaaattaataaataaggat 6537540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 6537667 - 6537699
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  6537667 aatttgttaggttaaataattgcaaacctaata 6537699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 6537725 - 6537757
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataa 58  Q
    ||||||||| |||||||||||||||||||||||    
T  6537725 gttaaattgttgctgacctaacaaaattaataa 6537757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 16165698 - 16165730
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  16165698 aatttgttaggttaaataattgcaaacctaata 16165730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 18912255 - 18912215
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    |||| |||||||||||| ||| |||||||||||||||||||    
T  18912255 ttagattaaattgctgcagacataacaaaattaataaataa 18912215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 21617850 - 21617818
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  21617850 aatttgttaggttaaataattgcaaacctaata 21617818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 27296431 - 27296399
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  27296431 aatttgttaggttaaataattgcaaacctaata 27296399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 42492177 - 42492209
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  42492177 aatttgttaggttaaataattgcaaacctaata 42492209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 42497303 - 42497335
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  42497303 aatttgttaggttaaataattgcaaacctaata 42497335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 44263404 - 44263372
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  44263404 aatttgttaggttaaataattgcaaacctaata 44263372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 45417612 - 45417644
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  45417612 aatttgttaggttaaataattgcaaacctaata 45417644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 49483972 - 49483932
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||| ||||||| ||||||| |||||||||||||||||||    
T  49483972 gttaagttgctgcagacctaataaaattaataaataaggat 49483932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 51114000 - 51113968
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  51114000 aatttgttaggttaaataattgcaaacctaata 51113968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 51114184 - 51114152
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  51114184 aatttgttaggttaaataattgcaaacctaata 51114152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 163869 - 163912
Alignment:
Q  23 taggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  163869 taggttaaattgctgcagacctaacaaaattaataaataaggat 163912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 163814 - 163846
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||||||||||||||||||||||||||    
T  163814 aatttattaggttaaataattgcaaacctaata 163846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 163233 - 163277
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| ||| |||||||||||||||| ||||||    
T  163233 ttaggttaagttgctgcagacttaacaaaattaataaagaaggat 163277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 12451 - 12495
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  ||||||||||||||||||||||||||    
T  12451 ttaggttaaattgctgcaaacctaacaaaattaataaataaggat 12495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 7673105 - 7673149
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  7673105 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 7673149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 11314019 - 11313975
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  11314019 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 11313975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 16528999 - 16528955
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  16528999 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 16528955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 16529175 - 16529131
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||    
T  16529175 ttaggttaaattgctgcagacgtaacaaaattaataaataaggat 16529131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19121947 - 19121903
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  19121947 ttaggttaaattgatgcagacctaacaaaattaataaataaggat 19121903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 31487149 - 31487193
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| |||| |||||||||||||||||||||||||||    
T  31487149 ttaggttaaattactgcagacctaacaaaattaataaataaggat 31487193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 38109925 - 38109881
Alignment:
Q  23 taggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||    
T  38109925 taggttaaattgctgcagacgtaacaaaattaataaataaggatt 38109881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 41092955 - 41092999
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  41092955 ttaggttaaattgatgcagacctaacaaaattaataaataaggat 41092999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 41093135 - 41093179
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  41093135 ttaggttaaattgatgcagacctaacaaaattaataaataaggat 41093179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 35159743 - 35159700
Alignment:
Q  23 taggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  35159743 taggttaaattgctgcagacgtaacaaaattaataaataaggat 35159700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 9488135 - 9488180
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  9488135 ttaggttaaattgttgcagacgtaacaaaattaataaataaggatt 9488180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 26523225 - 26523270
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggatt 67  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  26523225 ttaggttaaattgatgcagacataacaaaattaataaataaggatt 26523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7127599 - 7127555
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||||||||  || |||||||||||||||||||||||    
T  7127599 ttaggttaaattgctgcaaacgtaacaaaattaataaataaggat 7127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 7673285 - 7673325
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  7673285 ttaggttaaattgctgcagacgtaacaaaattaataaataa 7673325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 12442218 - 12442258
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  12442218 ttaggttaaattgctgcagacctaacataattaataaataa 12442258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 19122283 - 19122239
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||    
T  19122283 ttaggttaaattgatgcaaacctaacaaaattaataaataaggat 19122239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 22431625 - 22431581
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||||    
T  22431625 ttaggttaagttgctgcagacttaacaaaattaataaataaggat 22431581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 23138072 - 23138028
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||    
T  23138072 ttaggttaaaatgctgcagacctaacgaaattaataaataaggat 23138028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 24351537 - 24351581
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    |||||||||||| |||| ||||||| |||||||||||||||||||    
T  24351537 ttaggttaaattactgcagacctaaaaaaattaataaataaggat 24351581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 26523321 - 26523365
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  26523321 ttaggttaaattgatgcagacataacaaaattaataaataaggat 26523365  T

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Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 38268920 - 38268880
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  38268920 ttaggttaaattgttgcagacctaacaaaattaataaataa 38268880  T

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Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 11314112 - 11314042
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  11314112 ataggaatgaaattggtgcgatgcatttttttagatggaattttttaggttaaataattgcaaacctaata 11314042  T

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Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 43394927 - 43394997
Alignment:
Q  143 ataggaatgaaattggtacgattcannnnnnnagaagcaatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||| |||| ||       ||| | ||||| |||||||||||||||||||||||||||    
T  43394927 ataggaatgaaattggtgcgatgcatttttttagatgaaatttgttaggttaaataattgcaaacctaata 43394997  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 7673230 - 7673262
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  7673230 aatttgttaggttaaataattgcaaacctaata 7673262  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 11313734 - 11313702
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  11313734 aatttgttaggttaaataattgcaaacctaata 11313702  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 11313896 - 11313864
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  11313896 aatttgttaggttaaataattgcaaacctaata 11313864  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 12442164 - 12442196
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  12442164 aatttgttaggttaaataattgcaaacctaata 12442196  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 14166253 - 14166289
Alignment:
Q  26 gttaaattgctgctgacctaacaaaattaataaataa 62  Q
    |||||||| |||| |||||||||||||||||||||||    
T  14166253 gttaaattactgcagacctaacaaaattaataaataa 14166289  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 14854372 - 14854328
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||    
T  14854372 ttaggttaagttgctgcaaacctaataaaattaataaataaggat 14854328  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 16305440 - 16305408
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    |||||||||| ||||||||||||||||||||||    
T  16305440 aatttattagattaaataattgcaaacctaata 16305408  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 16526292 - 16526260
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  16526292 aatttgttaggttaaataattgcaaacctaata 16526260  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 16528694 - 16528662
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  16528694 aatttgttaggttaaataattgcaaacctaata 16528662  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 16529051 - 16529019
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  16529051 aatttgttaggttaaataattgcaaacctaata 16529019  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 23140998 - 23140958
Alignment:
Q  82 ggcaacaagatatgaatgaaataaaagtatgaaattggttc 122  Q
    |||||||||||| |||||||||||| | |||||||||||||    
T  23140998 ggcaacaagataggaatgaaataaaggcatgaaattggttc 23140958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 24350930 - 24350962
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  24350930 aatttgttaggttaaataattgcaaacctaata 24350962  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 24351483 - 24351515
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  24351483 aatttgttaggttaaataattgcaaacctaata 24351515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 31486901 - 31486941
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataa 62  Q
    ||||||||||||| ||| ||||||| |||||||||||||||    
T  31486901 ttaggttaaattgttgcagacctaaaaaaattaataaataa 31486941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 35159797 - 35159765
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  35159797 aatttgttaggttaaataattgcaaacctaata 35159765  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 41092902 - 41092934
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  41092902 aatttgttaggttaaataattgcaaacctaata 41092934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 41093081 - 41093113
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||| |||||||||||||||||||||||||||    
T  41093081 aatttgttaggttaaataattgcaaacctaata 41093113  T

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Target: scaffold0432 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 5375 - 5419
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||||    
T  5375 ttaggttaagttgctgcagacctaataaaattaataaataaggat 5419  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1600 - 1641
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataag 63  Q
    |||| |||||||||||| ||| ||||||||||||||||||||    
T  1600 ttagattaaattgctgcagacgtaacaaaattaataaataag 1641  T

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Target: scaffold0504; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 1545 - 1577
Alignment:
Q  181 aatttattaggttaaataattgcaaacctaata 213  Q
    ||||||||||||||||||||||||||| |||||    
T  1545 aatttattaggttaaataattgcaaacttaata 1577  T

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Target: scaffold0318 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 6036 - 5992
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||| || || ||||||| |||||||||||||||||||    
T  6036 ttaggttaaatcgccgcagacctaataaaattaataaataaggat 5992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 13132 - 13088
Alignment:
Q  22 ttaggttaaattgctgctgacctaacaaaattaataaataaggat 66  Q
    ||||||||||||| ||| |||| ||| ||||||||||||||||||    
T  13132 ttaggttaaattgttgcagaccaaacgaaattaataaataaggat 13088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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