View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21155_high_3 (Length: 324)
Name: NF21155_high_3
Description: NF21155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21155_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 321
Target Start/End: Complemental strand, 403692 - 403389
Alignment:
| Q |
13 |
aatatgcttctaaaacacttcaagtttaattttcaccatgaatgtggttttaatttgtaaaaacttacatatatatgggaatcacactagttattctaaa |
112 |
Q |
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| T |
403692 |
aatatgcttctaaaacacttcaagtttaattttcaccatgactgtggttttaatttgtaaaaacttacatatatatgggaatcacactagttattctaaa |
403593 |
T |
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| Q |
113 |
agaatttaaatacgatgtcatataaattagattctcatgaaggtcatgttagatatcaaaatataattaattcctagttaatatattatagcttgctagt |
212 |
Q |
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| T |
403592 |
agaatttaaatacgatgtcatataaattagattctcatgaaggtcatgttagatatcaaaatataattaattcctagttaatatattatagcttgctagt |
403493 |
T |
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| Q |
213 |
atttggttaatatatagcttgcttacagct-attgtaaccaggcacatacatgtataacaaaattagtagctattatatatatcgcaggcacaaattttg |
311 |
Q |
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||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| |
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| T |
403492 |
atttggttaatatatagtttgcttacagctaattgtaaccaggc----acatgtataacaaaattagtagctat--tatatatcacaggcacaaattttg |
403399 |
T |
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| Q |
312 |
gagtaactga |
321 |
Q |
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|||||||||| |
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| T |
403398 |
gagtaactga |
403389 |
T |
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