View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21155_low_3 (Length: 403)
Name: NF21155_low_3
Description: NF21155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21155_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 22 - 378
Target Start/End: Complemental strand, 24499212 - 24498856
Alignment:
| Q |
22 |
atgttcatttgccatcgtgtccatgaatattagtttttgttattaatattgactgatacctaaaacttgccaagaagaggaaaattgtacctttacgcca |
121 |
Q |
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| T |
24499212 |
atgttcatttgccatcgtgtccatgaatattagtttttgttattaatattgactgatacctaaaacttgccaagaagaggaaaattgtacctttacgcca |
24499113 |
T |
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| Q |
122 |
aaaaactcacaaaggtgcagtttttggttttatttnnnnnnngatcactgacactctttgttggttgattagtcattttactatgatataagataagaaa |
221 |
Q |
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| T |
24499112 |
aaaaactcacaaaggtgcagtttttggttttatttaaaaaaagatcactgacactctttgttggttgattagtcattttactatgatataagataagaaa |
24499013 |
T |
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| Q |
222 |
gtagattgtatattaatcatttttatatgatgagaaagtgaactttgtaatacccttataaggacatatattgtttctgttaagtgttgttatcataagg |
321 |
Q |
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| T |
24499012 |
gtagattgtatattagtcatttttatatgatgagaaagtgaactttgtaatacccttataagggcatatattgtttctgttaagtgttgttatcataagg |
24498913 |
T |
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| Q |
322 |
ttggcttgtatttttaatgtactttgattttaaataatcaacatagtgttccttttt |
378 |
Q |
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||||||||||||||| |||||||||||| | |||| ||||||||||||| ||||||| |
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| T |
24498912 |
ttggcttgtattttttatgtactttgatatcaaattatcaacatagtgtgccttttt |
24498856 |
T |
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