View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21156_low_1 (Length: 498)

Name: NF21156_low_1
Description: NF21156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21156_low_1
NF21156_low_1
[»] scaffold0855 (1 HSPs)
scaffold0855 (1-482)||(3084-3566)
[»] scaffold0847 (1 HSPs)
scaffold0847 (1-482)||(3249-3731)
[»] chr7 (67 HSPs)
chr7 (1-299)||(38877203-38877502)
chr7 (1-196)||(4983139-4983333)
chr7 (1-172)||(679488-679660)
chr7 (1-175)||(4541085-4541258)
chr7 (25-196)||(17206408-17206579)
chr7 (379-482)||(10018558-10018661)
chr7 (22-242)||(17911451-17911671)
chr7 (1-180)||(4460751-4460931)
chr7 (1-192)||(33609625-33609814)
chr7 (383-479)||(3194842-3194938)
chr7 (23-196)||(35964231-35964404)
chr7 (22-196)||(30063959-30064136)
chr7 (4-121)||(16076819-16076937)
chr7 (4-117)||(12561921-12562035)
chr7 (101-215)||(15522950-15523066)
chr7 (6-121)||(782769-782885)
chr7 (7-121)||(12567612-12567727)
chr7 (35-118)||(41722686-41722769)
chr7 (35-193)||(17946633-17946791)
chr7 (6-121)||(5840645-5840761)
chr7 (23-121)||(14941739-14941838)
chr7 (23-121)||(15369332-15369431)
chr7 (23-121)||(33612279-33612378)
chr7 (23-121)||(48355595-48355694)
chr7 (106-172)||(3194559-3194625)
chr7 (5-148)||(4316985-4317125)
chr7 (102-196)||(5825960-5826053)
chr7 (36-121)||(648810-648895)
chr7 (23-175)||(3376507-3376660)
chr7 (35-88)||(9264407-9264460)
chr7 (53-242)||(16897306-16897493)
chr7 (5-144)||(4328641-4328777)
chr7 (35-193)||(8780431-8780589)
chr7 (35-121)||(48340616-48340702)
chr7 (1-89)||(4465778-4465866)
chr7 (23-90)||(8787291-8787359)
chr7 (1-52)||(13434906-13434958)
chr7 (23-90)||(15707250-15707318)
chr7 (23-121)||(9004605-9004704)
chr7 (23-121)||(16097425-16097524)
chr7 (1-46)||(10204710-10204756)
chr7 (71-196)||(48713384-48713508)
chr7 (50-148)||(10018926-10019024)
chr7 (140-242)||(13434745-13434846)
chr7 (377-482)||(6712841-6712946)
chr7 (1-52)||(6257526-6257578)
chr7 (1-52)||(9194003-9194055)
chr7 (1-52)||(21005544-21005596)
chr7 (58-121)||(4030017-4030080)
chr7 (106-148)||(6712576-6712619)
chr7 (102-193)||(9194078-9194168)
chr7 (454-482)||(680317-680345)
chr7 (444-480)||(4159003-4159039)
chr7 (444-480)||(8712718-8712754)
chr7 (444-480)||(8718222-8718258)
chr7 (444-480)||(9577582-9577618)
chr7 (444-480)||(9583249-9583285)
chr7 (444-480)||(9585008-9585044)
chr7 (444-480)||(13667535-13667571)
chr7 (444-480)||(13674213-13674249)
chr7 (35-67)||(13731837-13731869)
chr7 (444-480)||(18389393-18389429)
chr7 (444-480)||(18589580-18589616)
chr7 (444-480)||(18593174-18593210)
chr7 (444-480)||(18599805-18599841)
chr7 (444-480)||(18618474-18618510)
chr7 (444-480)||(38295750-38295786)
[»] chr5 (35 HSPs)
chr5 (1-242)||(23029567-23029810)
chr5 (1-242)||(24166118-24166359)
chr5 (34-196)||(22170692-22170852)
chr5 (379-482)||(23110418-23110521)
chr5 (6-175)||(24214668-24214839)
chr5 (34-196)||(16676986-16677147)
chr5 (71-196)||(12410433-12410556)
chr5 (35-121)||(20915973-20916059)
chr5 (6-122)||(24220345-24220462)
chr5 (30-121)||(23343561-23343652)
chr5 (35-121)||(15059355-15059441)
chr5 (22-90)||(22942369-22942438)
chr5 (23-121)||(20967729-20967828)
chr5 (23-193)||(24165160-24165330)
chr5 (110-168)||(23110769-23110825)
chr5 (134-193)||(34223246-34223305)
chr5 (4-122)||(31057710-31057825)
chr5 (37-90)||(20169484-20169537)
chr5 (376-414)||(24164739-24164777)
chr5 (443-480)||(23748408-23748445)
chr5 (445-482)||(31414354-31414391)
chr5 (444-480)||(15731672-15731708)
chr5 (444-480)||(15735891-15735927)
chr5 (444-480)||(20595653-20595689)
chr5 (444-480)||(20601939-20601975)
chr5 (444-480)||(20608230-20608266)
chr5 (444-480)||(20614567-20614603)
chr5 (157-193)||(21273545-21273581)
chr5 (444-480)||(23598546-23598582)
chr5 (444-480)||(23684582-23684618)
chr5 (444-480)||(23850193-23850229)
chr5 (444-480)||(24935199-24935235)
chr5 (444-480)||(24940891-24940927)
chr5 (444-480)||(28622304-28622340)
chr5 (444-480)||(34780041-34780077)
[»] chr2 (47 HSPs)
chr2 (4-240)||(24371431-24371668)
chr2 (4-196)||(20852028-20852220)
chr2 (4-186)||(19124324-19124505)
chr2 (35-242)||(15583668-15583875)
chr2 (35-242)||(20281913-20282118)
chr2 (22-241)||(23257018-23257238)
chr2 (34-186)||(24321711-24321863)
chr2 (35-180)||(19013055-19013193)
chr2 (380-480)||(19013287-19013387)
chr2 (34-148)||(22578379-22578493)
chr2 (4-121)||(24824975-24825093)
chr2 (23-120)||(16134201-16134299)
chr2 (4-121)||(24820590-24820708)
chr2 (35-171)||(23340511-23340647)
chr2 (53-241)||(41653649-41653835)
chr2 (6-121)||(42767365-42767481)
chr2 (369-478)||(19124584-19124685)
chr2 (23-121)||(5499783-5499882)
chr2 (53-174)||(21454-21574)
chr2 (71-196)||(11391030-11391154)
chr2 (71-196)||(11407691-11407815)
chr2 (23-90)||(19929396-19929464)
chr2 (379-482)||(15027051-15027153)
chr2 (53-196)||(23698848-23698990)
chr2 (102-196)||(32441433-32441526)
chr2 (51-196)||(21344523-21344667)
chr2 (380-482)||(22578598-22578701)
chr2 (34-90)||(24023875-24023931)
chr2 (1-52)||(24507347-24507399)
chr2 (1-52)||(25858647-25858699)
chr2 (23-89)||(539209-539276)
chr2 (23-121)||(25481359-25481462)
chr2 (23-121)||(25488965-25489068)
chr2 (57-144)||(15027399-15027487)
chr2 (445-480)||(21468741-21468776)
chr2 (10-121)||(24177675-24177789)
chr2 (450-480)||(23801173-23801203)
chr2 (1-31)||(24366309-24366339)
chr2 (1-46)||(32441358-32441404)
chr2 (8-52)||(11391146-11391191)
chr2 (8-52)||(11407807-11407852)
chr2 (444-480)||(22044482-22044518)
chr2 (444-480)||(22287915-22287951)
chr2 (444-480)||(22665419-22665455)
chr2 (34-90)||(24018635-24018691)
chr2 (444-480)||(24877224-24877260)
chr2 (444-480)||(25357868-25357904)
[»] chr4 (46 HSPs)
chr4 (35-232)||(23793620-23793816)
chr4 (22-196)||(5513650-5513823)
chr4 (10-175)||(9487040-9487205)
chr4 (33-175)||(5675382-5675523)
chr4 (15-196)||(11922451-11922632)
chr4 (33-175)||(33331020-33331161)
chr4 (30-196)||(31593800-31593965)
chr4 (22-196)||(12345957-12346133)
chr4 (35-121)||(11888994-11889080)
chr4 (380-482)||(12346954-12347056)
chr4 (380-482)||(13889192-13889294)
chr4 (4-90)||(6518378-6518465)
chr4 (23-161)||(11902626-11902764)
chr4 (1-79)||(17168863-17168942)
chr4 (1-79)||(17174435-17174514)
chr4 (4-120)||(21102222-21102339)
chr4 (1-89)||(38652156-38652244)
chr4 (71-196)||(10731060-10731184)
chr4 (71-196)||(10944829-10944953)
chr4 (23-121)||(3355238-3355337)
chr4 (23-121)||(16951877-16951976)
chr4 (30-121)||(18286973-18287064)
chr4 (23-121)||(21275213-21275312)
chr4 (23-121)||(24125231-24125330)
chr4 (35-196)||(3772203-3772365)
chr4 (23-89)||(20059166-20059233)
chr4 (57-148)||(12347309-12347401)
chr4 (1-52)||(13622331-13622383)
chr4 (23-90)||(43701576-43701644)
chr4 (147-196)||(13622224-13622273)
chr4 (1-52)||(10731176-10731228)
chr4 (1-52)||(10944945-10944997)
chr4 (323-413)||(16212600-16212691)
chr4 (106-148)||(12506587-12506629)
chr4 (376-414)||(23793952-23793990)
chr4 (6-121)||(55798315-55798427)
chr4 (53-121)||(39043541-39043610)
chr4 (444-480)||(3672-3708)
chr4 (445-480)||(3354996-3355032)
chr4 (444-480)||(11496436-11496472)
chr4 (444-480)||(13823270-13823306)
chr4 (449-481)||(18241947-18241979)
chr4 (449-481)||(20059499-20059531)
chr4 (444-480)||(26292951-26292987)
chr4 (444-480)||(40845435-40845471)
chr4 (444-480)||(42709553-42709589)
[»] chr6 (82 HSPs)
chr6 (26-242)||(31965563-31965782)
chr6 (1-210)||(29682481-29682692)
chr6 (1-148)||(20222856-20223004)
chr6 (1-148)||(22116840-22116988)
chr6 (36-186)||(23348176-23348325)
chr6 (35-196)||(25949231-25949391)
chr6 (33-175)||(20464300-20464442)
chr6 (33-164)||(16207753-16207883)
chr6 (129-240)||(20222355-20222466)
chr6 (129-240)||(22116339-22116450)
chr6 (35-242)||(25963786-25963991)
chr6 (35-242)||(25968433-25968638)
chr6 (22-175)||(15172167-15172321)
chr6 (53-196)||(25923427-25923569)
chr6 (51-196)||(18993100-18993243)
chr6 (1-89)||(20221190-20221279)
chr6 (1-89)||(22115174-22115263)
chr6 (4-122)||(210131-210250)
chr6 (136-242)||(20221083-20221187)
chr6 (136-242)||(22115067-22115171)
chr6 (22-175)||(24392885-24393039)
chr6 (53-196)||(25339287-25339429)
chr6 (4-121)||(18448752-18448870)
chr6 (15-196)||(18627333-18627512)
chr6 (4-121)||(24218697-24218815)
chr6 (4-121)||(25402452-25402570)
chr6 (6-121)||(18844443-18844559)
chr6 (35-175)||(15471106-15471246)
chr6 (22-175)||(18973591-18973745)
chr6 (25-180)||(12660479-12660634)
chr6 (132-240)||(26821740-26821847)
chr6 (35-90)||(17743526-17743581)
chr6 (23-121)||(18195537-18195636)
chr6 (35-90)||(18233835-18233890)
chr6 (53-196)||(24545652-24545794)
chr6 (34-241)||(4740843-4741050)
chr6 (22-175)||(15162129-15162283)
chr6 (34-186)||(28734159-28734312)
chr6 (6-121)||(18854601-18854717)
chr6 (53-196)||(19993501-19993642)
chr6 (34-175)||(25031237-25031379)
chr6 (71-193)||(29093468-29093589)
chr6 (146-242)||(29686719-29686815)
chr6 (71-196)||(32543166-32543290)
chr6 (23-121)||(18184401-18184500)
chr6 (369-416)||(18779794-18779841)
chr6 (35-90)||(30245242-30245297)
chr6 (71-196)||(20218523-20218647)
chr6 (169-242)||(20222789-20222862)
chr6 (71-196)||(22112548-22112672)
chr6 (169-242)||(22116773-22116846)
chr6 (1-52)||(5399257-5399309)
chr6 (34-90)||(9414357-9414413)
chr6 (132-196)||(19612856-19612919)
chr6 (347-414)||(20222649-20222717)
chr6 (347-414)||(22116633-22116701)
chr6 (1-52)||(32543282-32543334)
chr6 (1-82)||(12658029-12658109)
chr6 (379-481)||(13167972-13168074)
chr6 (68-148)||(13168277-13168359)
chr6 (54-180)||(18396545-18396671)
chr6 (1-38)||(31965507-31965544)
chr6 (108-148)||(32796647-32796688)
chr6 (132-196)||(17794083-17794146)
chr6 (22-89)||(26821875-26821940)
chr6 (34-89)||(3923658-3923713)
chr6 (51-86)||(25507616-25507651)
chr6 (4-121)||(25775006-25775133)
chr6 (106-155)||(13217406-13217455)
chr6 (449-482)||(24545957-24545990)
chr6 (1-52)||(5949655-5949707)
chr6 (444-480)||(6478914-6478950)
chr6 (444-480)||(6490335-6490371)
chr6 (1-52)||(6794978-6795030)
chr6 (10-90)||(8603508-8603590)
chr6 (444-480)||(15699912-15699948)
chr6 (444-480)||(18461021-18461057)
chr6 (444-480)||(20022617-20022653)
chr6 (444-480)||(22165371-22165407)
chr6 (444-480)||(22244169-22244205)
chr6 (449-481)||(22343475-22343507)
chr6 (347-414)||(31965867-31965935)
[»] chr8 (25 HSPs)
chr8 (4-295)||(24221542-24221835)
chr8 (1-180)||(22904520-22904698)
chr8 (380-479)||(31470093-31470192)
chr8 (4-173)||(24341985-24342152)
chr8 (26-194)||(14162161-14162329)
chr8 (35-196)||(23221530-23221690)
chr8 (25-175)||(19792242-19792393)
chr8 (23-193)||(26012888-26013059)
chr8 (35-193)||(25396843-25397001)
chr8 (23-175)||(6279653-6279806)
chr8 (4-122)||(17515800-17515919)
chr8 (35-90)||(23193980-23194035)
chr8 (35-121)||(14351660-14351746)
chr8 (39-121)||(14878317-14878399)
chr8 (1-196)||(21139571-21139766)
chr8 (23-90)||(18162011-18162079)
chr8 (1-52)||(9317880-9317932)
chr8 (106-148)||(7465513-7465556)
chr8 (100-186)||(18008056-18008143)
chr8 (1-31)||(1990515-1990545)
chr8 (1-46)||(24967303-24967349)
chr8 (449-482)||(14162492-14162525)
chr8 (449-481)||(20263121-20263153)
chr8 (444-480)||(21382451-21382487)
chr8 (449-481)||(22991035-22991067)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-196)||(168099-168293)
scaffold0014 (376-414)||(167858-167896)
[»] chr3 (48 HSPs)
chr3 (13-242)||(11869836-11870064)
chr3 (15-175)||(8685849-8686009)
chr3 (15-186)||(8531806-8531979)
chr3 (33-175)||(41545774-41545915)
chr3 (35-175)||(16703719-16703860)
chr3 (1-194)||(42244538-42244729)
chr3 (1-88)||(17023247-17023334)
chr3 (23-242)||(11398752-11398970)
chr3 (22-89)||(13069783-13069851)
chr3 (51-241)||(17041594-17041783)
chr3 (35-121)||(2721912-2721998)
chr3 (50-148)||(27992760-27992858)
chr3 (6-115)||(43842060-43842170)
chr3 (6-122)||(19656097-19656213)
chr3 (53-196)||(13418291-13418433)
chr3 (23-121)||(14494826-14494925)
chr3 (1-196)||(27407115-27407312)
chr3 (411-482)||(27993135-27993206)
chr3 (1-89)||(11577785-11577874)
chr3 (53-241)||(7908383-7908569)
chr3 (23-121)||(14976310-14976409)
chr3 (102-196)||(17209553-17209645)
chr3 (51-196)||(17050649-17050793)
chr3 (140-196)||(13604950-13605006)
chr3 (1-52)||(25765832-25765884)
chr3 (23-89)||(6236873-6236940)
chr3 (53-196)||(11827454-11827596)
chr3 (35-90)||(34053626-34053681)
chr3 (71-242)||(36076057-36076226)
chr3 (39-121)||(14660810-14660892)
chr3 (71-196)||(25054943-25055067)
chr3 (147-215)||(14659201-14659269)
chr3 (1-46)||(36076224-36076270)
chr3 (445-482)||(42244888-42244925)
chr3 (1-52)||(25055059-25055111)
chr3 (71-121)||(14137795-14137845)
chr3 (147-193)||(40846691-40846737)
chr3 (102-175)||(3279751-3279824)
chr3 (449-482)||(17209357-17209390)
chr3 (449-481)||(3279539-3279571)
chr3 (444-480)||(7600712-7600748)
chr3 (444-480)||(14815347-14815383)
chr3 (444-480)||(17078043-17078079)
chr3 (444-480)||(17696795-17696831)
chr3 (444-480)||(18214672-18214708)
chr3 (157-193)||(19567152-19567188)
chr3 (1-52)||(22038888-22038940)
chr3 (153-193)||(27880118-27880158)
[»] chr1 (39 HSPs)
chr1 (22-196)||(20860756-20860930)
chr1 (379-482)||(2977568-2977671)
chr1 (43-180)||(20899426-20899562)
chr1 (379-479)||(15347374-15347474)
chr1 (33-196)||(23298797-23298958)
chr1 (33-175)||(16384972-16385114)
chr1 (22-166)||(26194180-26194325)
chr1 (26-194)||(13799464-13799632)
chr1 (379-482)||(20493130-20493233)
chr1 (369-479)||(20899646-20899756)
chr1 (23-196)||(17716658-17716831)
chr1 (35-196)||(48256218-48256377)
chr1 (6-121)||(2386202-2386318)
chr1 (379-479)||(21918481-21918581)
chr1 (6-121)||(21792342-21792458)
chr1 (15-114)||(25405084-25405184)
chr1 (4-116)||(21784214-21784327)
chr1 (370-482)||(24679683-24679795)
chr1 (6-121)||(28206355-28206471)
chr1 (23-121)||(41802251-41802350)
chr1 (50-168)||(15347018-15347136)
chr1 (35-87)||(17986584-17986636)
chr1 (71-196)||(52235908-52236033)
chr1 (35-88)||(8648876-8648929)
chr1 (35-88)||(39286643-39286696)
chr1 (35-82)||(30819075-30819122)
chr1 (34-155)||(16148469-16148591)
chr1 (71-196)||(16431474-16431598)
chr1 (51-193)||(20412167-20412315)
chr1 (51-196)||(28763914-28764058)
chr1 (9-89)||(20493490-20493569)
chr1 (23-90)||(26134535-26134602)
chr1 (23-90)||(28207903-28207971)
chr1 (23-90)||(44538252-44538320)
chr1 (6-52)||(52235869-52235916)
chr1 (50-88)||(15346897-15346935)
chr1 (449-482)||(13799795-13799828)
chr1 (53-121)||(52755395-52755464)
chr1 (444-480)||(19209683-19209719)
[»] scaffold1559 (1 HSPs)
scaffold1559 (1-175)||(1328-1502)
[»] scaffold0088 (2 HSPs)
scaffold0088 (16-147)||(38447-38578)
scaffold0088 (382-482)||(38056-38156)
[»] scaffold0001 (3 HSPs)
scaffold0001 (33-175)||(82629-82771)
scaffold0001 (6-121)||(425020-425136)
scaffold0001 (51-180)||(520670-520798)
[»] scaffold1323 (1 HSPs)
scaffold1323 (4-121)||(1897-2015)
[»] scaffold0123 (2 HSPs)
scaffold0123 (6-121)||(2489-2605)
scaffold0123 (35-108)||(14089-14164)
[»] scaffold0916 (1 HSPs)
scaffold0916 (35-196)||(3418-3579)
[»] scaffold0197 (1 HSPs)
scaffold0197 (22-242)||(8874-9085)
[»] scaffold0075 (1 HSPs)
scaffold0075 (6-175)||(19356-19527)
[»] scaffold0031 (4 HSPs)
scaffold0031 (35-121)||(23245-23331)
scaffold0031 (39-90)||(198-249)
scaffold0031 (23-89)||(100382-100449)
scaffold0031 (35-90)||(77850-77905)
[»] scaffold1208 (1 HSPs)
scaffold1208 (11-121)||(1943-2054)
[»] scaffold0447 (2 HSPs)
scaffold0447 (23-121)||(6399-6498)
scaffold0447 (23-121)||(11013-11112)
[»] scaffold0383 (1 HSPs)
scaffold0383 (23-121)||(9008-9107)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-121)||(18756-18874)
[»] scaffold0142 (2 HSPs)
scaffold0142 (6-122)||(26839-26956)
scaffold0142 (6-90)||(21692-21777)
[»] scaffold0026 (1 HSPs)
scaffold0026 (9-121)||(13702-13815)
[»] scaffold0037 (1 HSPs)
scaffold0037 (6-121)||(48375-48491)
[»] scaffold0371 (1 HSPs)
scaffold0371 (23-121)||(9100-9199)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-196)||(31557-31753)
[»] scaffold0011 (2 HSPs)
scaffold0011 (23-121)||(163925-164024)
scaffold0011 (4-193)||(172645-172832)
[»] scaffold0138 (2 HSPs)
scaffold0138 (6-121)||(27350-27466)
scaffold0138 (6-121)||(39346-39462)
[»] scaffold0471 (1 HSPs)
scaffold0471 (23-121)||(9819-9918)
[»] scaffold0211 (1 HSPs)
scaffold0211 (23-121)||(17655-17754)
[»] scaffold0074 (2 HSPs)
scaffold0074 (22-175)||(22746-22900)
scaffold0074 (444-480)||(34073-34109)
[»] scaffold0251 (1 HSPs)
scaffold0251 (23-120)||(18954-19052)
[»] scaffold0035 (5 HSPs)
scaffold0035 (389-482)||(32327-32419)
scaffold0035 (106-148)||(31224-31267)
scaffold0035 (108-148)||(33374-33415)
scaffold0035 (380-429)||(33696-33745)
scaffold0035 (57-148)||(31948-32038)
[»] scaffold0362 (2 HSPs)
scaffold0362 (35-84)||(9236-9285)
scaffold0362 (140-196)||(9286-9342)
[»] scaffold0168 (1 HSPs)
scaffold0168 (35-88)||(8879-8932)
[»] scaffold0064 (1 HSPs)
scaffold0064 (23-90)||(48802-48870)
[»] scaffold0058 (1 HSPs)
scaffold0058 (6-121)||(61825-61941)
[»] scaffold0213 (1 HSPs)
scaffold0213 (22-180)||(21569-21729)
[»] scaffold0098 (2 HSPs)
scaffold0098 (141-189)||(44405-44453)
scaffold0098 (1-52)||(44292-44344)
[»] scaffold0096 (1 HSPs)
scaffold0096 (6-121)||(37944-38060)
[»] scaffold0057 (2 HSPs)
scaffold0057 (71-243)||(21041-21210)
scaffold0057 (1-33)||(21222-21254)
[»] scaffold0006 (1 HSPs)
scaffold0006 (23-84)||(33972-34034)
[»] scaffold0264 (1 HSPs)
scaffold0264 (4-52)||(22419-22468)
[»] scaffold0231 (1 HSPs)
scaffold0231 (103-204)||(21218-21318)
[»] scaffold0012 (1 HSPs)
scaffold0012 (39-88)||(49904-49953)
[»] scaffold0760 (1 HSPs)
scaffold0760 (445-480)||(6506-6541)
[»] scaffold0157 (1 HSPs)
scaffold0157 (106-148)||(13848-13890)
[»] scaffold0228 (1 HSPs)
scaffold0228 (53-121)||(19645-19714)
[»] scaffold1225 (1 HSPs)
scaffold1225 (132-196)||(2236-2300)
[»] scaffold0404 (2 HSPs)
scaffold0404 (444-480)||(1395-1431)
scaffold0404 (444-480)||(3666-3702)
[»] scaffold0112 (1 HSPs)
scaffold0112 (444-480)||(4996-5032)
[»] scaffold0009 (1 HSPs)
scaffold0009 (445-480)||(246148-246184)
[»] scaffold0004 (1 HSPs)
scaffold0004 (444-480)||(253732-253768)


Alignment Details
Target: scaffold0855 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 3566 - 3084
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3566 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 3467  T
Q  101 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3466 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaattac 3367  T
Q  201 actagaaaggtagctagatcagggagcaaaagcagcaaaagggttggtacagtcgcacacggtcgtgtagctggaggcacgagccgtgtgctcctctcta 300  Q
    |||  ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  3366 acttaaaaggcagctagatcaggaagcaaaagcagcaaaagggttggcacagtcgcacacggtcgtgtagctggaggcacgggccgtgtgcccctctctg 3267  T
Q  301 acttgtgcttatatttgataacttggaggcacgggctgtttcaccacaggcacgggctgtgtatgata-ttttgtgcaagatcttcatatttttgtcttc 399  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  3266 acttgtgcatatatttgataacttggaggcatgggctgtgtcaccacaggcacgggctgtgtctgatatttttgtgcaggatcttcatatttttgtcttc 3167  T
Q  400 aatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3166 aatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 3084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 3731 - 3249
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3731 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 3632  T
Q  101 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3631 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaattac 3532  T
Q  201 actagaaaggtagctagatcagggagcaaaagcagcaaaagggttggtacagtcgcacacggtcgtgtagctggaggcacgagccgtgtgctcctctcta 300  Q
    |||  ||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||     
T  3531 acttaaaaggcagctagatcaggaagcaaaagcagcaaaagggttggcacagtcgcacacggtcgtgtagctggaggcacgggccgtgtgcccctctctg 3432  T
Q  301 acttgtgcttatatttgataacttggaggcacgggctgtttcaccacaggcacgggctgtgtatgata-ttttgtgcaagatcttcatatttttgtcttc 399  Q
    |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  3431 acttgtgcatatatttgataacttggaggcatgggctgtgtcaccacaggcacgggctgtgtctgatatttttgtgcaggatcttcatatttttgtcttc 3332  T
Q  400 aatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3331 aatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 196; Significance: 1e-106; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 38877502 - 38877203
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 100  Q
    ||||| ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38877502 aagaagataaaagtaaataacaagaaagtaaagagaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 38877403  T
Q  101 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattac 200  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||| |||||||||||    
T  38877402 tgctatctgctctatttatagcctaaaactaacttaagccccaagaattacatcaatagaatgttccacaagaaaccatgggcttttaagtcagaattac 38877303  T
Q  201 actagaaaggtagctagatcagggagcaaaagcagcaaaagggttggt-acagtcgcacacggtcgtgtagctggaggcacgagccgtgtgctcctctct 299  Q
    |||| ||||| || | | ||||| ||||||||||||||||||   | |  ||||||||||||| ||||| |||||||||||| |||||||||||||||||    
T  38877302 actaaaaaggcagttgggtcaggaagcaaaagcagcaaaaggaaagctgtcagtcgcacacggccgtgtggctggaggcacgggccgtgtgctcctctct 38877203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4983139 - 4983333
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    ||||||    
T  4983139 aagaacataaaggtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattgaatatgt 4983238  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||||||||||||||||||| ||| |||| |||||||||| |||||||||||||||| |||||||||||||||| || | || ||||||||||||    
T  4983239 ttgctagctgctctatttataggctacaact-acttaagccccaagaaatacatcaatataatgttccacaagaaaccacgggc-tttaggtcagaa 4983333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 679488 - 679660
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||||| |||||||||||| ||||| |||||||||||||||| | || | ||    
T  679488 aagaacataaaagtaaataacaagaaaataaagaagaacttttattcaaagaaataattgtcacttagaattttcaagaacaaaagatgagattacaagt 679587  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaag 172  Q
     ||||||||||||  |||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  679588 ctgctagctgctccttttatagcctaaaactaacttaagccctaagaaattaatcactagaatgttccacaag 679660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 4541258 - 4541085
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtt 100  Q
    ||||||||  |||||||||| |||||||||| | |||||||||||| |||||||||||||||||||| |||| || |||| |||||||||   || ||||    
T  4541258 aagaacatggaagtaaataataataaaataaggtgaacttttattcaaagaaacaattgtcacttattatttgcacgaacgaaagatgaatgaatgtgtt 4541159  T
Q  101 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||| ||||||||||||||| ||| |||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  4541158 tgctaactgctctatttatagtctacaact-acttaagccccaagaaatacatcaatagagtgttccacaagaaa 4541085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 17206408 - 17206579
Alignment:
Q  25 aaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcc 123  Q
    |||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||    | || ||||||||| ||||||||||||      
T  17206408 aaaataaagatgaacttttattcaaagagacaattgtcacttattatttccaagaacaaaagatgaattgttgtgattgctagctactctatttatagtt 17206507  T
Q  124 taaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    || || | ||||||||||||||||||| |||| ||||||||||||||||||| || | || ||||||||||||    
T  17206508 tacaa-tgacttaagccctaagaaatatatcactagaatgttccacaagaaaccacgggcatttaggtcagaa 17206579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 10018661 - 10018558
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||| || ||||| | ||||||||||||||||||||||    
T  10018661 gatctttatatttttgtcttcaatcagctccaaatcatgctcaagatccttccatcctttaatcattctccaaaatcatttcttttgctccaagactcaa 10018562  T
Q  479 tctt 482  Q
    ||||    
T  10018561 tctt 10018558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 22 - 242
Target Start/End: Complemental strand, 17911671 - 17911451
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag-aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    ||||||||||||| |||||||||||| ||| |||||||||| |||  |||||||||||||||| ||||||    |||| |||||||||| ||||||||||    
T  17911671 aataaaataaagatgaacttttattcaaaggaaacaattgtaactattaatttccaagaacaagagatgattcaatatatttgctagctactctatttat 17911572  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagat 219  Q
    ||  ||  |||| ||||||||| ||||||||||||||||||||||||||||||||| ||  ||| |||||||||||| || |||| | ||| |||| | |    
T  17911571 agtttacgacta-cttaagccccaagaaatacatcaatagaatgttccacaagaaaccacaagc-tttaggtcagaaataaactaaataggcagcttg-t 17911475  T
Q  220 cag-ggagcaaaagcagcaaaagg 242  Q
    ||| | ||||||||||||||||||    
T  17911474 cagagaagcaaaagcagcaaaagg 17911451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 4460751 - 4460931
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||  |||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||  ||| | |     
T  4460751 aagaacataaaataaaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattatacaagc 4460850  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatg 180  Q
    | | |  ||||||||||||||| |||| | | |||| ||||||||||| || |||| || | |||| ||||||||| ||||    
T  4460851 tagatgactgctctatttatagtctaacattgacttgagccctaagaactaaatcactaaagtgttgcacaagaaaccatg 4460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 33609814 - 33609625
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||  ||||||  | |||||||||| |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    ||||     
T  33609814 aagaacataaaataaaataa--agaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaattgttatga 33609717  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtc 192  Q
    | |||| || || ||||||||| ||| | |  |||||||||||||| ||||||||| |||||||||||| |||||| |||| |||||||||||    
T  33609716 tagctatctactttatttatagtctatatc-gacttaagccctaagcaatacatcactagaatgttccaaaagaaaccatgtgcttttaggtc 33609625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 383 - 479
Target Start/End: Original strand, 3194842 - 3194938
Alignment:
Q  383 ttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaat 479  Q
    ||||||||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||    
T  3194842 ttcatatttttttctccaatcggctccaaatcatgctctagatcctttcatccttaaatcatgctcccaaaccccttcttttgctccaagactcaat 3194938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 35964231 - 35964404
Alignment:
Q  23 ataaaataaagag-aacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    ||||||||||| | ||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  35964231 ataaaataaaggggaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 35964330  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
      || | |  ||||||  |||||| ||||||||| ||||||||||||||| ||| || | |||||||||||||||    
T  35964331 tatatatc-gacttaaaacctaagcaatacatcactagaatgttccacaaaaaaccaagggcttttaggtcagaa 35964404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 30063959 - 30064136
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaat---atatgtttgctagctgctctat 115  Q
    ||||||||||||| |||||||||||| |||  ||||||||||||||  ||| ||||||||||| |||| || |||   |||||||||||||||  |||||    
T  30063959 aataaaataaagatgaacttttattcaaaggaaaacaattgtcactattaaattccaagaacacaaga-gataattcaatatgtttgctagctattctat 30064057  T
Q  116 ttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||| ||  ||||| ||||||| | ||||||||||||||| ||||||||||||||||| |||| || ||||||||||||    
T  30064058 ttatagtctgcaacta-cttaagcaccaagaaatacatcaatggaatgttccacaagaaaccatgggc-tttaggtcagaa 30064136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 16076819 - 16076937
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |    
T  16076819 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatgg 16076918  T
Q  103 ctagctgctctatttatag 121  Q
    |||||| ||||||||||||    
T  16076919 ctagctactctatttatag 16076937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 12562035 - 12561921
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || |||| | |    
T  12562035 aacattaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttatgatgg 12561936  T
Q  103 ctagctgctctattt 117  Q
    |||||| ||||||||    
T  12561935 ctagctactctattt 12561921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 101 - 215
Target Start/End: Complemental strand, 15523066 - 15522950
Alignment:
Q  101 tgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaag--aaagcatgagcttttaggtcagaatt 198  Q
    ||||||| ||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||||||||||||||  ||  |||| |||||||||||| || |    
T  15523066 tgctagcggctctatttatagcctaaaacaaacttaaaccccaagaaatacatcaattgaatgttccacaaggaaacccatgggcttttaggtcaaaaat 15522967  T
Q  199 acactagaaaggtagct 215  Q
    | |||| ||||| ||||    
T  15522966 aaactaaaaaggcagct 15522950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 782769 - 782885
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |||    
T  782769 cataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggct 782868  T
Q  105 agctgctctatttatag 121  Q
    |||| |||||| |||||    
T  782869 agctactctatatatag 782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 12567727 - 12567612
Alignment:
Q  7 ataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgcta 105  Q
    ||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||| ||| ||||  |||||||||||||||| || | || | ||||    
T  12567727 ataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacatattatttaaaagaacaaaagatgaatatttgtgatggcta 12567628  T
Q  106 gctgctctatttatag 121  Q
    ||| ||||||||||||    
T  12567627 gctactctatttatag 12567612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 41722769 - 41722686
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattta 118  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || | || | ||||||| |||||||||    
T  41722769 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctattta 41722686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 17946791 - 17946633
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||  |   || | ||||||| |||||||||||| |||| |   |||    
T  17946791 gaacttttattcaaagaaacaattgacacttattatttccaagaacaaaagatgaatgttattgatagctagctactctatttatagtctaatatcgact 17946692  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    |||  |||||| ||    |||||||||||||| |||||||| || |||||||| |||||    
T  17946691 taaaacctaagcaactattcaatagaatgttctacaagaaaccacgagctttttggtca 17946633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 5840761 - 5840645
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||||||| |||||||| ||||||||||| |||||| ||||||||| ||||| || | || | |||    
T  5840761 cataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacagttgtcacttattatttccgagaacaaaatatgaatatttgtgatggct 5840662  T
Q  105 agctgctctatttatag 121  Q
    |||| | ||||||||||    
T  5840661 agctacgctatttatag 5840645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 14941739 - 14941838
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  14941739 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 14941838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 15369332 - 15369431
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  15369332 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 15369431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 33612279 - 33612378
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  33612279 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 33612378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 48355595 - 48355694
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| || ||||||||||||||||| ||||| |||||||||||||||| || | || | ||||||| ||||||||||||    
T  48355595 ataaaataaaggtgaacttttattcaaataaacaattgtcacttattatttcaaagaacaaaagatgaatatttgtgatggctagctactctatttatag 48355694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 3194559 - 3194625
Alignment:
Q  106 gctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaag 172  Q
    ||||||||||||||||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||    
T  3194559 gctgctctatttatagcctaaaactgacttaagccctaagaaatcaatcactagaaggttccacaag 3194625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 148
Target Start/End: Original strand, 4316985 - 4317125
Alignment:
Q  5 acataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||| |||||||||| ||| ||||   ||||||||||| |||||| |||||||||  | |||| |||| ||||||||||||| | ||| || || |    
T  4316985 acataaaaataaataacaagaaactaaa---aacttttattcaaagaaataattgtcacagaaaattcccaataacaaaagatgaata-ataagtctgat 4317080  T
Q  105 agctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
     ||||||||||||| |||||||||  |||||||||||||||||||    
T  4317081 ggctgctctatttacagcctaaaagttaacttaagccctaagaaa 4317125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 5826053 - 5825960
Alignment:
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||| ||||||||||||  || || | ||||||||||||||||||| | || ||||||||||||||||||| |||| |||||||||||||||    
T  5826053 gctagctactctatttatagtttacaa-tgacttaagccctaagaaatataacactagaatgttccacaagaaaccatgggcttttaggtcagaa 5825960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 648810 - 648895
Alignment:
Q  36 aacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    ||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  648810 aacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 648895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 3376507 - 3376660
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| | |||||||||||||||||||     | || | ||||||| ||||||||||||    
T  3376507 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattacttccaagaacaaaagatgatttgttgtgatggctagctactctatttatag 3376606  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
      || |    ||||||  |||||| || |||||| |||||||||||||||||||    
T  3376607 tttacattcgacttaaaacctaagcaagacatcactagaatgttccacaagaaa 3376660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 9264407 - 9264460
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  9264407 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatg 9264460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 16897306 - 16897493
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||||||||||||||||||| |    
T  16897306 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaatata 16897404  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
     |  ||||||||||||||||||| || | ||||||||||||||| || |||| | |||||||| |  | |  ||||||||||||||||||    
T  16897405 acgctagaatgttccacaagaaaccaagggcttttaggtcagaaataaacta-ataggtagcttgtccggaaagcaaaagcagcaaaagg 16897493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 144
Target Start/End: Original strand, 4328641 - 4328777
Alignment:
Q  5 acataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||| |||||||||| |||||||   |||||||||||| |||||| ||||||| |  | |||| |||| || |||||||||| | ||| || || |    
T  4328641 acataaaaataaataacaagaaaataa---gaacttttattcaaagaaataattgtcgcggaaaattcccaataataaaagatgaata-ataagtctgtt 4328736  T
Q  105 agctgctctatttatagcctaaaa-ctaacttaagccctaa 144  Q
     |||||||| |||||||||||||| ||||||||||||||||    
T  4328737 ggctgctctttttatagcctaaaagctaacttaagccctaa 4328777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 193
Target Start/End: Original strand, 8780431 - 8780589
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| ||||||||||| | |||||| ||||||||||||||||||||||    | || | ||||| | |||||||||||| || |    ||||    
T  8780431 gaacttttattcaaagaaacaattataacttattatttccaagaacaaaagatgaattattgtgatagctagatactctatttatagtcttatgtcaact 8780530  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    |||  |||||| ||    ||| ||||||||||||||||||| |||| ||||||||||||    
T  8780531 taaaacctaagcaactattcactagaatgttccacaagaaaccatgggcttttaggtca 8780589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 48340616 - 48340702
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | | ||||| ||||||||||||    
T  48340616 gaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggatagctactctatttatag 48340702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4465778 - 4465866
Alignment:
Q  1 aagaacataaaagtaaataacaataa-aataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||  |||||| ||||| ||||| |||||||||||||| |||||||||||||||||  |||||||  ||||||||||||||    
T  4465778 aagaacataaaataaaataa-aataataataaggagaacttttattcaaagaaacaattgtcactattaatttcagagaacaaaagatga 4465866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 8787291 - 8787359
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  ||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||    
T  8787291 ataaaataaaggtgaaattttattcaaagaaacaattgtcacttattattttcaagaacaaaagatgaa 8787359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13434958 - 13434906
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  13434958 aagaacataaaagtaaataacaataaaataaagatgaacttttattcaaagaa 13434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 15707250 - 15707318
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  15707250 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 15707318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 9004704 - 9004605
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| ||||| |||||||||||||| |||||  |||||||||||||||    |||| | ||||||| ||||||||||||    
T  9004704 ataaaataaaggtgaacttttattcaaagaaccaattgtcacttattatttcagagaacaaaagatgaattgttatgatagctagctactctatttatag 9004605  T

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Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 16097425 - 16097524
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||| | |||||  ||||||||||| ||| || | || | ||||||| ||||||||||||    
T  16097425 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttcttatttcagagaacaaaagacgaatatttttgatggctagctactctatttatag 16097524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10204756 - 10204710
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattc 46  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  10204756 aagaacataaaagtaaataacaataaaataaagatgaacttttattc 10204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 48713508 - 48713384
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    | || | ||||||| || |||||||||  || || | ||||||  |||||| ||||||||| || |||||||||||    
T  48713508 ttccaagaacaaaagatgaattgttgtgatagctagctactatatttatagtttacaa-tgacttaaaacctaagcaatacatcactataatgttccaca 48713410  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| |||| |||||||||||||||    
T  48713409 agaaaccatgggcttttaggtcagaa 48713384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 148
Target Start/End: Complemental strand, 10019024 - 10018926
Alignment:
Q  50 gaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    |||| |||||||||  | |||| |||||||||||||||||| |   |||| |  | ||||||| |||||||||||||| |||||||||||| |||||||    
T  10019024 gaaataattgtcacaaagaattcccaagaacaaaagatgaagaatcatgtctaatggctgctcgatttatagcctaaagctaacttaagccataagaaa 10018926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Complemental strand, 13434846 - 13434745
Alignment:
Q  140 cctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaa 239  Q
    |||||| ||||||||| ||||||||||||||| ||| || | |||| |||||||||| || |||| | |||||||| |  | || |||||||||||||||    
T  13434846 cctaagcaatacatcactagaatgttccacaataaaccaagggcttataggtcagaaataaacta-ataggtagcttgtccgggaagcaaaagcagcaaa 13434748  T
Q  240 agg 242  Q
    |||    
T  13434747 agg 13434745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 6712841 - 6712946
Alignment:
Q  377 aagatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactc 476  Q
    |||||||||||||||||| | ||||||| | |  ||| ||| || ||||||||  || | | || ||||||  |||||||||||||||||| ||||||||    
T  6712841 aagatcttcatatttttggcctcaatcaaccctgaatgatgttctagatccttccattccttaaccatgctcaaaaaccctttcttttgctacaagactc 6712940  T
Q  477 aatctt 482  Q
    ||||||    
T  6712941 aatctt 6712946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 6257526 - 6257578
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||| ||||||||||| | |||||||||||| |||||    
T  6257526 aagaacataaaagtaaataataataaaataaaggtgaacttttattccaagaa 6257578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9194003 - 9194055
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||| |||||    
T  9194003 aagaccataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 9194055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21005544 - 21005596
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||| |||||||||||||||||||||||||| | |||||||||||| |||||    
T  21005544 aagaagataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 21005596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Complemental strand, 4030080 - 4030017
Alignment:
Q  58 tgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||| ||||||||||||||||||||||  |  ||| | ||||||| ||||||||||||    
T  4030080 tgtcacttattatttccaagaacaaaagatgaatgttaatgatagctagctactctatttatag 4030017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 6712576 - 6712619
Alignment:
Q  106 gctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  6712576 gctgctctatttatagcctaaaagctaacttaaaccctaagaaa 6712619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 193
Target Start/End: Original strand, 9194078 - 9194168
Alignment:
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    ||||||| ||||||||||||  || || | ||||||  |||||| ||||||||| |||||| |||||||||||| ||||  |||||||||||    
T  9194078 gctagctactctatttatagtttacaa-tgacttaaaacctaagcaatacatcactagaatattccacaagaaaccatggtcttttaggtca 9194168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 454 - 482
Target Start/End: Original strand, 680317 - 680345
Alignment:
Q  454 ccctttcttttgctccaagactcaatctt 482  Q
    |||||||||||||||||||||||||||||    
T  680317 ccctttcttttgctccaagactcaatctt 680345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 4159003 - 4159039
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  4159003 tgctccaaatccctttcttttgctccaagactcaatc 4159039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 8712754 - 8712718
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  8712754 tgctccaaatccctttcttttgctccaagactcaatc 8712718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 8718258 - 8718222
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  8718258 tgctccaaatccctttcttttgctccaagactcaatc 8718222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 9577618 - 9577582
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9577618 tgctccaaatccctttcttttgctccaagactcaatc 9577582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 9583285 - 9583249
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9583285 tgctccaaatccctttcttttgctccaagactcaatc 9583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 9585044 - 9585008
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  9585044 tgctccaaatccctttcttttgctccaagactcaatc 9585008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 13667571 - 13667535
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13667571 tgctccaaatccctttcttttgctccaagactcaatc 13667535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 13674249 - 13674213
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13674249 tgctccaaatccctttcttttgctccaagactcaatc 13674213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 67
Target Start/End: Complemental strand, 13731869 - 13731837
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttat 67  Q
    |||||||||||| ||||||||||||||||||||    
T  13731869 gaacttttattcaaagaaacaattgtcacttat 13731837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 18389429 - 18389393
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18389429 tgctccaaatccctttcttttgctccaagactcaatc 18389393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 18589580 - 18589616
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18589580 tgctccaaatccctttcttttgctccaagactcaatc 18589616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 18593174 - 18593210
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18593174 tgctccaaatccctttcttttgctccaagactcaatc 18593210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 18599805 - 18599841
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18599805 tgctccaaatccctttcttttgctccaagactcaatc 18599841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 18618510 - 18618474
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18618510 tgctccaaatccctttcttttgctccaagactcaatc 18618474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 38295786 - 38295750
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  38295786 tgctccaaatccctttcttttgctccaagactcaatc 38295750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 1e-82; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 23029567 - 23029810
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||| ||||||||||||| |||||||||| |||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| | ||||||    
T  23029567 aagaacatagaagtaaataacaagaaaataaagaagaacttttattcaaagaaacaatcttcacttataatttccaagaacaaaagatgaatagatatgt 23029666  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa-gcatgagcttttaggtcagaatt 198  Q
     ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||  |||  |||||||||||| ||||    
T  23029667 ctgctagctgctctatttatagcctaaaactaacataagccccaagaaatacatcaatagaatgttccacaagaaacccataggcttttaggtcaaaatt 23029766  T
Q  199 acactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
    |||||| ||||| |||| ||||||| ||||||||||||||||||    
T  23029767 acactaaaaaggcagctggatcaggaagcaaaagcagcaaaagg 23029810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 24166359 - 24166118
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    |||||||| ||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24166359 aagaacatgaaagtaaataacaagcaaataaagatgaacttttattcaaagaaacaattgtcacttatcatttccaagaacaaaagatgaaaatatatgt 24166260  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaatta 199  Q
    || |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| | | ||  |||| |||| || ||    
T  24166259 ttcctagctgctctatttatagcataaaactaacttaagccccaagaaatacatcaatagaatgttgcacaagaaaccgt-aggctttatgtcaaaaata 24166161  T
Q  200 cactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
     |||| ||||| |||| ||||||| ||||||||||||||||||    
T  24166160 aactaaaaaggcagcttgatcaggaagcaaaagcagcaaaagg 24166118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 22170852 - 22170692
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaac 133  Q
    ||||||||||||| |||||||||||||||||  |||||||  | |||||||||||||   ||||| |||||||||||| ||||||||| ||| |||| ||    
T  22170852 agaacttttattcaaagaaacaattgtcactattaatttcagataacaaaagatgaatgaatatgattgctagctgctttatttatagtctacaact-ac 22170754  T
Q  134 ttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||||  ||||||||||| ||||||||||| |||||||||  ||| || ||||||||||||    
T  22170753 ttaagcctcaagaaatacattaatagaatgtttcacaagaaactatgggc-tttaggtcagaa 22170692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 23110521 - 23110418
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||| ||||||| |||| |||||||| ||||||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||  ||||||||||||    
T  23110521 gatctttatattttagtctccaatcagcaccaaatcatgctctagatcctttcatcctttaatcatgctccaaaaccctttctttttatccaagactcaa 23110422  T
Q  479 tctt 482  Q
    ||||    
T  23110421 tctt 23110418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 24214839 - 24214668
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||| |||||||||||| || || |||| | |||    
T  24214839 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagataaatatttatgatggct 24214740  T
Q  105 agctgctctatttatagcctaaaactaacttaagccctaag-aaatacatcaatagaatgttccacaagaaa 175  Q
    |||| ||||||||||||| || |  | ||||||   ||||| || ||||| | |||||||||||||||||||    
T  24214739 agctactctatttatagcatacatttgacttaaaatctaagcaattacattactagaatgttccacaagaaa 24214668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 34 - 196
Target Start/End: Complemental strand, 16677147 - 16676986
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaac 133  Q
    ||||||||||||| |||||||||||||||||  |||||||  |||| |||||||||  ||| | | ||| | ||||||||||||||||||||| | | ||    
T  16677147 agaacttttattcaaagaaacaattgtcactattaatttcagagaagaaaagatgattatacaagcttgatggctgctctatttatagcctaacattgac 16677048  T
Q  134 ttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||||||||||||| |||| |  | |||| ||||||||| |||| || ||||||||||||    
T  16677047 ttaagccctaagaaataaatcactgaagtgttgcacaagaaatcatgggc-tttaggtcagaa 16676986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 12410556 - 12410433
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| ||||||||| ||||||||||||  || || | ||||||||||||||||||| |||| ||||||||||||||    
T  12410556 ttccaagaacaaaagatgaattgttatgattgctagctactctatttatagtttacaa-tgacttaagccctaagaaataaatcactagaatgttccaca 12410458  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| |||| || ||||||||||||    
T  12410457 agaaaccatgggc-tttaggtcagaa 12410433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 20915973 - 20916059
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||||||||| || | || | ||||||| ||||||||||||    
T  20915973 gaacttttattcaaagaaataattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 20916059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 24220462 - 24220345
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||| |||||||||||| || || | || |  ||    
T  24220462 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagataaatatttgtgatgact 24220363  T
Q  105 agctgctctatttatagc 122  Q
    |||| |||||||||||||    
T  24220362 agctactctatttatagc 24220345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 30 - 121
Target Start/End: Original strand, 23343561 - 23343652
Alignment:
Q  30 aaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||| |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  23343561 aaagtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 23343652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 15059441 - 15059355
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  15059441 gaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 15059355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 22942438 - 22942369
Alignment:
Q  22 aataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||||||||  ||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22942438 aataaaataaaggtgaaattttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaa 22942369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 20967828 - 20967729
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||| ||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  20967828 ataaaataaagttgaacttttattcaaagaaaaaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 20967729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 24165330 - 24165160
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||   |||||||||||||| | || ||| | | | ||| ||||||||||||    
T  24165330 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttaagagaacaaaagatgatatta-atgatagatggctactctatttatag 24165232  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
     || |   | ||||||  |||||||||   |||| ||||||||||||||||||| || | ||||||||||||    
T  24165231 tcttatggtgacttaaaacctaagaaactaatcagtagaatgttccacaagaaaccacgggcttttaggtca 24165160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 23110825 - 23110769
Alignment:
Q  110 ctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttcca 168  Q
    |||||||||||||||||  |||||||||||||||||||||| |||| ||||||||||||    
T  23110825 ctctatttatagcctaa--ctaacttaagccctaagaaataaatcactagaatgttcca 23110769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 34223246 - 34223305
Alignment:
Q  134 ttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    ||||| |||||| ||||||||| ||||||||||||||||||| |||| ||||||||||||    
T  34223246 ttaagacctaagcaatacatcactagaatgttccacaagaaaccatgggcttttaggtca 34223305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 31057710 - 31057825
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    ||||||||||||||||| || ||| |||||  |||||||||||| |||||| ||||||||||||| |||||    | ||||||||||| || | || | |    
T  31057710 aacataaaagtaaataataagaaagtaaaggtgaacttttattcaaagaaaaaattgtcacttattatttc----agcaaaagatgaatatttgtgatgg 31057805  T
Q  103 ctagctgctctatttatagc 122  Q
    |||||| |||||||||||||    
T  31057806 ctagctactctatttatagc 31057825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 20169484 - 20169537
Alignment:
Q  37 acttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||| ||||||||||||||||||||  ||||||| |||||||||||||    
T  20169484 acttttattcaaagaaacaattgtcacttattctttccaataacaaaagatgaa 20169537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 24164777 - 24164739
Alignment:
Q  376 caagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  24164777 caagatcttcatatttttggcttcaatcatctccaaatc 24164739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Complemental strand, 23748445 - 23748408
Alignment:
Q  443 atgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    ||||| |||| |||||||||||||||||||||||||||    
T  23748445 atgctccaaatccctttcttttgctccaagactcaatc 23748408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 482
Target Start/End: Complemental strand, 31414391 - 31414354
Alignment:
Q  445 gcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    |||||||| | |||||||||||||||||||||||||||    
T  31414391 gcttcaaatctctttcttttgctccaagactcaatctt 31414354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 15731708 - 15731672
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  15731708 tgctccaaatccctttcttttgctccaagactcaatc 15731672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 15735927 - 15735891
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  15735927 tgctccaaatccctttcttttgctccaagactcaatc 15735891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 20595653 - 20595689
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20595653 tgctccaaatccctttcttttgctccaagactcaatc 20595689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 20601939 - 20601975
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20601939 tgctccaaatccctttcttttgctccaagactcaatc 20601975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 20608230 - 20608266
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20608230 tgctccaaatccctttcttttgctccaagactcaatc 20608266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 20614567 - 20614603
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20614567 tgctccaaatccctttcttttgctccaagactcaatc 20614603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 21273581 - 21273545
Alignment:
Q  157 tagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    |||||||||||| |||||| |||||||||||||||||    
T  21273581 tagaatgttccaaaagaaatcatgagcttttaggtca 21273545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 23598582 - 23598546
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  23598582 tgctccaaatccctttcttttgctccaagactcaatc 23598546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 23684618 - 23684582
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  23684618 tgctccaaatccctttcttttgctccaagactcaatc 23684582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 23850193 - 23850229
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  23850193 tgctccaaatccctttcttttgctccaagactcaatc 23850229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 24935235 - 24935199
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  24935235 tgctccaaatccctttcttttgctccaagactcaatc 24935199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 24940927 - 24940891
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  24940927 tgctccaaatccctttcttttgctccaagactcaatc 24940891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 28622304 - 28622340
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  28622304 tgctccaaatccctttcttttgctccaagactcaatc 28622340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 34780077 - 34780041
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  34780077 tgctccaaatccctttcttttgctccaagactcaatc 34780041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 4 - 240
Target Start/End: Original strand, 24371431 - 24371668
Alignment:
Q  4 aacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgc 103  Q
    ||||||||||||| |||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24371431 aacataaaagtaattaacaagaaaatagagagaaattttattcaaagaaacaattgtcacttataaattccaagaacaaaagatgaaaatatatgtttgc 24371530  T
Q  104 tagctgctctatttatagcctaaaactaacttaag-ccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacac 202  Q
    ||| |||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||    
T  24371531 tagatgctctatttatagtctaaaactaacttaagccccaaagaaatacatcaatagaatgttccacaagaaaccatggacttttaggtcagagttacac 24371630  T
Q  203 tagaaaggtagctagatcagggagcaaaagcagcaaaa 240  Q
    || ||||| | || ||||||| ||||||||||| ||||    
T  24371631 taaaaaggcatctggatcaggaagcaaaagcagtaaaa 24371668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 4 - 196
Target Start/End: Complemental strand, 20852220 - 20852028
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaactttt-attctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgttt 101  Q
    ||||| |||||||||||||| |||||||||| |||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||| |  ||||||||    
T  20852220 aacatgaaagtaaataacaagaaaataaagatgaactttttattcaaagaaacaattgtcacttattatttcgaagaacaaaagatgatacaatatgttt 20852121  T
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| |||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||| || ||||||||||||    
T  20852120 gctcgctgctctatttatagcctataact-acttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgggc-tttaggtcagaa 20852028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 4 - 186
Target Start/End: Original strand, 19124324 - 19124505
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    ||||||||| |||| ||||| |||||||||| |||||||||||| |||||||||||||||||||| |||| || ||||||||||||||   |||||||||    
T  19124324 aacataaaa-taaacaacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcatgaacaaaagatgaatgaatatgtttg 19124422  T
Q  103 ctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttt 186  Q
    |||||| |||||||||||| |||||||| |||||||||| ||||||| ||||||||||||||| ||||||||| |||| |||||    
T  19124423 ctagctactctatttatagtctaaaact-acttaagccccaagaaatgcatcaatagaatgtttcacaagaaaccatgggcttt 19124505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 15583875 - 15583668
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||| |||| | ||||| | |||||||||||||||| |||| | | |||    
T  15583875 gaacttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgagaatacaagtttggtcgctgctctatttatagtctaacaatgact 15583776  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaa-aggtagctagatcagggagcaaaagc 233  Q
    ||| |||||||||||| |||| |  | |||| ||||||||| |||| || |||||||||||| || |||| || ||| |||| | | | | |||||||||    
T  15583775 taaaccctaagaaataaatcactgaagtgttgcacaagaaaccatgggc-tttaggtcagaaataaactaaaataggcagcttgttgaagaagcaaaagc 15583677  T
Q  234 agcaaaagg 242  Q
    |||||||||    
T  15583676 agcaaaagg 15583668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 20282118 - 20281913
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    | || | || |||| |||||||||||| ||| | |  |||    
T  20282118 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttgtgatagccagctactctatttatagtctatatc-gact 20282020  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagca 234  Q
    ||| ||||||| ||||||||| ||||||||||||||||||| || | ||||||||||||||| || |||| | |||||||| |  | |  ||||||||||    
T  20282019 taaaccctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtcagaaataaacta-ataggtagcttgtccggaaagcaaaagca 20281921  T
Q  235 gcaaaagg 242  Q
    ||||||||    
T  20281920 gcaaaagg 20281913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 23257018 - 23257238
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattta 118  Q
    ||||||||||||| |||||||||||| |||  ||||||||||||||  ||| |||||||||||| ||||||    ||||||||||||||| |||||||||    
T  23257018 aataaaataaagatgaacttttattcaaagcaaaacaattgtcactattaaattccaagaacaagagatgattcaatatgtttgctagctactctattta 23257117  T
Q  119 tagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctaga 218  Q
    |||  || ||||| ||||||||  ||||||||||||||||||||||||||||||||| |||| |  |||||||||||| || |||| | ||| |||| |     
T  23257118 tagtttacaacta-cttaagccacaagaaatacatcaatagaatgttccacaagaaaccatg-gactttaggtcagaaataaactaaacaggaagcttgt 23257215  T
Q  219 tcagggagcaaaagcagcaaaag 241  Q
      | | |||||||||||||||||    
T  23257216 cgaagaagcaaaagcagcaaaag 23257238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 34 - 186
Target Start/End: Complemental strand, 24321863 - 24321711
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttat-aatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||| || || ||||||||||||||||| ||||||||||||||||||||||    |||||||||| || |||||||||||||| ||| |||||     
T  24321863 agaacttttactcaaataaacaattgtcacttattaatttccaagaacaaaagatgattgaatatgtttgccaggtgctctatttatagtctacaacta- 24321765  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttt 186  Q
    ||||| ||| || ||||||||||||||||| |||||||||||| |||| |||||    
T  24321764 cttaaaccccaacaaatacatcaatagaatattccacaagaaaccatgggcttt 24321711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 180
Target Start/End: Original strand, 19013055 - 19013193
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| ||||||||||||||||||       |||||||||||||||||    ||||||||| |||||||||||||||||| ||| |||| |||    
T  19013055 gaacttttattcaaagaaacaattgtcactt-------ccaagaacaaaagatgattgaatatgtttgttagctgctctatttatagtctacaact-act 19013146  T
Q  135 taagccctaagaaatacatcaata-gaatgttccacaagaaagcatg 180  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||    
T  19013147 taagccccaagaaatacatcaataggaatgttccacaagaaaccatg 19013193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 380 - 480
Target Start/End: Original strand, 19013287 - 19013387
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaat 479  Q
    |||||||||||||||| ||||||||||||||||||||  |  |||||||||||||||| |||| |||| |||| ||||||||||| ||||||||||||||    
T  19013287 atcttcatatttttgttttcaatcagctccaaatcatattttagatccttttatcctttaatcttgctccaaacccctttcttttactccaagactcaat 19013386  T
Q  480 c 480  Q
    |    
T  19013387 c 19013387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 22578379 - 22578493
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaa-ctaa 132  Q
    ||||||||||||| |||||| | ||||||| || ||||||||| ||||||||||||| | ||| || || | ||||||||||||||||||||||| ||||    
T  22578379 agaacttttattcaaagaaatagttgtcacataaaatttccaaaaacaaaagatgaata-ataagtctggtggctgctctatttatagcctaaaagctaa 22578477  T
Q  133 cttaagccctaagaaa 148  Q
    ||||||||||||||||    
T  22578478 cttaagccctaagaaa 22578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 24824975 - 24825093
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||| ||||| |||||  ||||||||||||||| || | || | |    
T  24824975 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcagagaacaaaagatgaatatttgtgatgg 24825074  T
Q  103 ctagctgctctatttatag 121  Q
    |||||| ||||||||||||    
T  24825075 ctagctactctatttatag 24825093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 16134201 - 16134299
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttata 120  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||| |||||||||||||||| || | || | ||||||| |||||||||||    
T  16134201 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatgaatatttgtgatggctagctactctatttata 16134299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 24820590 - 24820708
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||| ||||||||||| ||| |||||  |||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||| || | || | |    
T  24820590 aacataaacgtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatgaatatttgtgatgg 24820689  T
Q  103 ctagctgctctatttatag 121  Q
    ||| || ||||||||||||    
T  24820690 ctaactactctatttatag 24820708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 23340647 - 23340511
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||     | |||| ||||||| ||||||||||||  || |    |||    
T  23340647 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgatttgttgtgttggctagctactctatttatagtttacattcgact 23340548  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaa 171  Q
    |||  |||||| ||||||||| ||||||| |||||||    
T  23340547 taaaacctaagcaatacatcactagaatgctccacaa 23340511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 41653649 - 41653835
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||||||||||||||||||| |    
T  41653649 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaatata 41653747  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaag 241  Q
     || ||||||||||||||||||| || |  |||||||||||||| || |||| | |||||||| |  | || |||||||||||||||||    
T  41653748 acactagaatgttccacaagaaaccacggacttttaggtcagaaataaacta-ataggtagcttgtccgggaagcaaaagcagcaaaag 41653835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 42767365 - 42767481
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  | ||||||||||||| || | || | |||    
T  42767365 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagataacaaaagatgaatatttgtgatggct 42767464  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  42767465 agctactctatttatag 42767481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 369 - 478
Target Start/End: Original strand, 19124584 - 19124685
Alignment:
Q  369 ttttgtgcaagatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctc 468  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||  |  |||||||||        |||| |||| |||| |||||||||||||||    
T  19124584 ttttgtacaagatcttcatatttttgtcttcaatcaactccaaatcatattttagatccttt--------aatcttgctccaaacccctttcttttgctc 19124675  T
Q  469 caagactcaa 478  Q
    ||||||||||    
T  19124676 caagactcaa 19124685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 5499783 - 5499882
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||   ||||||||||||||| || | || | ||||||| ||||||||||||    
T  5499783 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagatgaatatttgtgatggctagctactctatttatag 5499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 21454 - 21574
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| |||||||||||| ||| || | ||||||||||||||||||| |    
T  21454 acaattgtcactatttaattccaagaacaaaagatgaatcgttgtgatagctagctactctatttatagtctacaa-tgacttaagccctaagaaatata 21552  T
Q  153 tcaatagaatgttccacaagaa 174  Q
     || ||||||||||||||||||    
T  21553 acactagaatgttccacaagaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 11391154 - 11391030
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| | | ||||| |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||||||||||||||    
T  11391154 ttccaagaacaaaagatgaattgttatgatagttagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 11391056  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || |  ||||||||||||||    
T  11391055 agaaaccaaggacttttaggtcagaa 11391030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 11407815 - 11407691
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| | | ||||| |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||||||||||||||    
T  11407815 ttccaagaacaaaagatgaattgttatgatagttagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 11407717  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || |  ||||||||||||||    
T  11407716 agaaaccaaggacttttaggtcagaa 11407691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 19929464 - 19929396
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  19929464 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 19929396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 15027153 - 15027051
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    ||||||||||||||||   ||||||  | ||||||||||||| ||||||||  || | | || |||||| ||||| ||||||||||||||||||||||||    
T  15027153 gatcttcatatttttggtctcaatcgac-ccaaatcatgctccagatccttccattccttaaccatgctccaaaaacctttcttttgctccaagactcaa 15027055  T
Q  479 tctt 482  Q
    ||||    
T  15027054 tctt 15027051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 23698848 - 23698990
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| |||||||||||   || || | |||||||||||||||||||||    
T  23698848 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctagctactctatttataatttacaa-tgacttaagccctaagaaataca 23698946  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||| || |||||  |||| ||||||||| |||||    
T  23698947 tcactagaatgtttcataagaagccatgggcttttaggccagaa 23698990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 102 - 196
Target Start/End: Original strand, 32441433 - 32441526
Alignment:
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||| |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||||||||||||||| ||| || | |||||||||||||||    
T  32441433 gctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccacaaaaaaccaagggcttttaggtcagaa 32441526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 196
Target Start/End: Original strand, 21344523 - 21344667
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaata 150  Q
    ||||||||||||||  | | |||||| |||||||||||||    | || | ||||||  |||||||||||| ||| || | |||||||||||||||||||    
T  21344523 aaacaattgtcactatttaattccaataacaaaagatgaattgttgtgatagctagcaactctatttatagtctacaa-tgacttaagccctaagaaata 21344621  T
Q  151 catcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     | || |||||||||||||||||||  | | |||||||| ||||||    
T  21344622 taacactagaatgttccacaagaaactacgggcttttagatcagaa 21344667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 22578598 - 22578701
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatcctt-ttatccttaaatcatgcttcaaaaccctttc-ttttgctccaagactca 477  Q
    |||||||||||||||   ||||||| | ||||||||||||  ||||||||  | ||||| || |||||| |||||||||||| |||||||||||||||||    
T  22578598 atcttcatatttttggtctcaatcatccccaaatcatgctttagatccttcctttcctt-aaccatgctccaaaaccctttctttttgctccaagactca 22578696  T
Q  478 atctt 482  Q
    |||||    
T  22578697 atctt 22578701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 24023875 - 24023931
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||||||||| |||||| | ||||||| || |||||||||||||||||||||||    
T  24023875 agaacttttattcaaagaaatagttgtcacataaaatttccaagaacaaaagatgaa 24023931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24507399 - 24507347
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaa 52  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| |||||    
T  24507399 aagaacataaaaggaaataacaataaaataaagatgaacttttattccaagaa 24507347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25858647 - 25858699
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||| | ||||||||||| ||||||    
T  25858647 aagaacataaaagtaaataacaataaaataaaggtgaacttttattttaagaa 25858699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 539276 - 539209
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  | ||||||||||||    
T  539276 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagaaaacaaaagatga 539209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 25481462 - 25481359
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcactta----taatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattt 117  Q
    |||||||||||  |||||||||||| |||||||||||||||||||    | |||||  ||||||||||||||| || | || | ||||||| ||||||||    
T  25481462 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttatttcagagaacaaaagatgaatatttgtgatggctagctactctattt 25481363  T
Q  118 atag 121  Q
    ||||    
T  25481362 atag 25481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 25489068 - 25488965
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcactta----taatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattt 117  Q
    |||||||||||  |||||||||||| |||||||||||||||||||    | |||||  ||||||||||||||| || | || | ||||||| ||||||||    
T  25489068 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttatttcagagaacaaaagatgaatatttgtgatggctagctactctattt 25488969  T
Q  118 atag 121  Q
    ||||    
T  25488968 atag 25488965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 15027487 - 15027399
Alignment:
Q  57 ttgtcacttataatttccaagaacaaaagatgaaa-atatatgtttgctagctgctctatttatagcctaaaa-ctaacttaagccctaa 144  Q
    ||||||| || |||| ||||||||||||||||||  ||| | || || | ||||||||||||||||||||||| ||||||||||||||||    
T  15027487 ttgtcacataaaattcccaagaacaaaagatgaatcata-aggtatggtggctgctctatttatagcctaaaagctaacttaagccctaa 15027399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 480
Target Start/End: Original strand, 21468741 - 21468776
Alignment:
Q  445 gcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||||||| |||||||||||||||||||||||||||    
T  21468741 gcttcaaatccctttcttttgctccaagactcaatc 21468776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 24177675 - 24177789
Alignment:
Q  10 aaagtaaataacaataaaataaaga--gaacttttattctaagaaacaattgtcacttata-atttccaagaacaaaagatgaaaatatatgtttgctag 106  Q
    ||||||||| ||||  |||||||||  |||||||||||   | | |||||||||||||||  | |||||||||||||||||||||   |||| | |||||    
T  24177675 aaagtaaattacaaagaaataaagaaagaacttttattaagaaagacaattgtcacttattgaattccaagaacaaaagatgaaatgttatgatagctag 24177774  T
Q  107 ctgctctatttatag 121  Q
    || ||||||||||||    
T  24177775 ctactctatttatag 24177789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 450 - 480
Target Start/End: Original strand, 23801173 - 23801203
Alignment:
Q  450 aaaaccctttcttttgctccaagactcaatc 480  Q
    |||||||||||||||||||||||||||||||    
T  23801173 aaaaccctttcttttgctccaagactcaatc 23801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 24366309 - 24366339
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataa 31  Q
    |||||||||||||||||||||||||||||||    
T  24366309 aagaacataaaagtaaataacaataaaataa 24366339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32441358 - 32441404
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattc 46  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||    
T  32441358 aagaacgtaaaagtaaataacaataaaataaaggtgaacttttattc 32441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11391191 - 11391146
Alignment:
Q  8 taaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||    
T  11391191 taaaagtaaataacaataaaataaaggtgaacttttattccaagaa 11391146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 11407852 - 11407807
Alignment:
Q  8 taaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||||||||||||||||||||||| | |||||||||||| |||||    
T  11407852 taaaagtaaataacaataaaataaaggtgaacttttattccaagaa 11407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 22044482 - 22044518
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22044482 tgctccaaatccctttcttttgctccaagactcaatc 22044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 22287951 - 22287915
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22287951 tgctccaaatccctttcttttgctccaagactcaatc 22287915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 22665455 - 22665419
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22665455 tgctccaaatccctttcttttgctccaagactcaatc 22665419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 24018635 - 24018691
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||||||||| |||||| | ||||||| || |||| |||||||||||| |||||    
T  24018635 agaacttttattcaaagaaatagttgtcacataaaattcccaagaacaaaacatgaa 24018691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 24877260 - 24877224
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  24877260 tgctccaaatccctttcttttgctccaagactcaatc 24877224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 25357904 - 25357868
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  25357904 tgctccaaatccctttcttttgctccaagactcaatc 25357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 138; Significance: 6e-72; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 35 - 232
Target Start/End: Original strand, 23793620 - 23793816
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  23793620 gaacttttattcaaagaaacaattg-cacttataatttccaagaacaaaagatgagaatatatgtttgttagctgctctatttatagcctaaaactaact 23793718  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaag 232  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||  || | ||||||| ||||||||    
T  23793719 taagccccaagaaatacatcaatagaatgttccacaagaaaccatgggcttttaggtcaaaattacactaaaaagacagttggatcaggaagcaaaag 23793816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 5513650 - 5513823
Alignment:
Q  22 aataaaataaagagaacttttattctaagaaacaattgtcacttat-aatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttata 120  Q
    ||||||| || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    |||||||| ||||||||| ||||||||    
T  5513650 aataaaaaaatgagaacttttattcaaagaaacaattgtcacttattaatttacaagaacaaaagatgattgaatatgttttctagctgctttatttata 5513749  T
Q  121 gcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    | ||||||||| ||||||||| ||||| |||||||||||||||||||| |||||| |||| || ||||||||||||    
T  5513750 gtctaaaacta-cttaagccccaagaattacatcaatagaatgttccataagaaaccatgggc-tttaggtcagaa 5513823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 9487040 - 9487205
Alignment:
Q  10 aaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagct 108  Q
    ||||||||||||||||||||||||  ||  |||| ||| |||||| |||||||||||| ||||  |||||||||||||||||   |||||||||||| ||    
T  9487040 aaagtaaataacaataaaataaaggtgatatttttttcaaagaaataattgtcacttagaattctcaagaacaaaagatgaatgaatatgtttgctacct 9487139  T
Q  109 gctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||||||| ||| |||| |||||||||| |||||||||||||||||| ||||||||||||||    
T  9487140 gctctatttatagtctacaact-acttaagccccaagaaatacatcaatagagtgttccacaagaaa 9487205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 5675523 - 5675382
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||| ||||||| |||||||| |||||||||||||||||  ||||||||||||||    ||||||||||||||| |||||||||||| ||| |||| |    
T  5675523 gagaacatttattcaaagaaacagttgtcacttataatttcagagaacaaaagatgattcaatatgtttgctagcttctctatttatagtctacaact-a 5675425  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  5675424 cttaaaccccaagaaatacatcaatagaatgttccacaagaaa 5675382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 196
Target Start/End: Original strand, 11922451 - 11922632
Alignment:
Q  15 aaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctct 113  Q
    ||||||||| |||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||| || || ||| | ||||| | ||| ||||    
T  11922451 aaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaatattaatatacaagtttgatggctactct 11922550  T
Q  114 atttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||||||||| | | ||||||||||||||||||| |||| || | |||| ||||||||| || | || ||||||||||||    
T  11922551 atttatagcctaacaatgacttaagccctaagaaatagatcactaaagtgttgcacaagaaaccaagggc-tttaggtcagaa 11922632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 33331020 - 33331161
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||||| |||||| |||||||||||||||||||  ||||||| ||||||    ||||||||||||||| ||||||||||||  || |||| |    
T  33331020 gagaacttttattcaaagaaataattgtcacttataatttcagagaacaatagatgatttgatatgtttgctagctactctatttatagtttacaact-a 33331118  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  33331119 cttaagccccaagaaatacatcagtagaatgttccacaagaaa 33331161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 30 - 196
Target Start/End: Complemental strand, 31593965 - 31593800
Alignment:
Q  30 aaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaac 129  Q
    |||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    |||| | ||||| | |||||||||||| ||| |||    
T  31593965 aaagtgaacttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatgaattgttatgatagctagttactctatttatagtctataac 31593866  T
Q  130 taacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
      ||||||  |||||| ||||||||| ||||||||||||||||||| || | |||||||||||||||    
T  31593865 -gacttaaaacctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtcagaa 31593800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 12345957 - 12346133
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattta 118  Q
    ||||||||||||| |||||||||||| |||  ||||||||||||||  ||| |||||||||||| ||||||||||||| ||||| | |||||||||||||    
T  12345957 aataaaataaagatgaacttttattcaaaggaaaacaattgtcactattaaattccaagaacaagagatgaaaatataagtttgatggctgctctattta 12346056  T
Q  119 tagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||| || | | | ||||||||||||||||| || | || | |||| ||||||||| |||| || ||||||||||||    
T  12346057 tagccaaatattgatttaagccctaagaaataaattactacagtgttacacaagaaaccatgggc-tttaggtcagaa 12346133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 11888994 - 11889080
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || | || | ||||||| ||||||||||||    
T  11888994 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 11889080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 482
Target Start/End: Complemental strand, 12347056 - 12346954
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaat 479  Q
    ||||| ||||||||| ||||||||||| ||||||||||||| ||||||||  || | | || |||||| |||||||||||||||| ||||||||||||||    
T  12347056 atctttatatttttggcttcaatcagccccaaatcatgctctagatccttccattccttaaccatgctccaaaaccctttctttttctccaagactcaat 12346957  T
Q  480 ctt 482  Q
    |||    
T  12346956 ctt 12346954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 13889192 - 13889294
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaat 479  Q
    |||||||||||||||  || ||||||||| ||||||||||| ||||||||  || | | || |||||||||||||||||||||||||||||| |||||||    
T  13889192 atcttcatatttttggttttaatcagctcgaaatcatgctctagatccttccattccttaaccatgcttcaaaaccctttcttttgctccaatactcaat 13889291  T
Q  480 ctt 482  Q
    |||    
T  13889292 ctt 13889294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 6518465 - 6518378
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  6518465 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 6518378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 161
Target Start/End: Original strand, 11902626 - 11902764
Alignment:
Q  23 ataaaataaa-gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||| | |||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    |||| | ||||||| ||||||||||||    
T  11902626 ataaaataaatgtgaacttttatttaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatag 11902725  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaa 161  Q
     ||| |||  ||||||  |||||| ||||||||| |||||    
T  11902726 tctataac-gacttaaaacctaagcaatacatcactagaa 11902764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17168942 - 17168863
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaa 79  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||| |||||| |||||||||||| ||||||||||||    
T  17168942 aagaacataaaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcacttagaatttccaagaa 17168863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17174514 - 17174435
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaa 79  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||| |||||| |||||||||||| ||||||||||||    
T  17174514 aagaacataaaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcacttagaatttccaagaa 17174435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 21102222 - 21102339
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||| ||||||||||||| ||||   ||||||||||||||| || | || | |    
T  21102222 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaataattgtcacttattatttaagagaacaaaagatgaatatttgtgatgg 21102321  T
Q  103 ctagctgctctatttata 120  Q
    |||||| |||||||||||    
T  21102322 ctagctactctatttata 21102339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38652244 - 38652156
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||| ||||||||||  |||||| || |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  38652244 aagaacataaaa-taaataacaaggaaataaggatgaacttttattcaaagaaacaattgtcacttattatttccaataacaaaagatga 38652156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 10731184 - 10731060
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||||||  |||||| ||||||||| ||||||||||||||    
T  10731184 ttccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgacttaaaacctaagcaatacatcattagaatgttccaca 10731086  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| |||| |||||||||||||||    
T  10731085 agaaatcatgggcttttaggtcagaa 10731060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 10944953 - 10944829
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||||||  |||||| ||||||||| ||||||||||||||    
T  10944953 ttccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgacttaaaacctaagcaatacatcattagaatgttccaca 10944855  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| |||| |||||||||||||||    
T  10944854 agaaatcatgggcttttaggtcagaa 10944829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 3355337 - 3355238
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||   ||||||||||||||| || | || | ||||||| ||||||||||||    
T  3355337 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttatagaacaaaagatgaatatttgtgatggctagctactctatttatag 3355238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 16951976 - 16951877
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  ||||| |||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  16951976 ataaaataaaggtgaactgttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 16951877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 30 - 121
Target Start/End: Complemental strand, 18287064 - 18286973
Alignment:
Q  30 aaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||| |||||||||||| |||||| ||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  18287064 aaagtgaacttttattcaaagaaagaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 18286973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 21275312 - 21275213
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||| ||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  21275312 ataaaataaaggtgaacttttattcaaagaaacaattgtcccttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 21275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 24125231 - 24125330
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| |||||  ||||||||||||| | || | || | ||||||| || |||||||||    
T  24125231 ataaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatggatatttgtgatggctagctactttatttatag 24125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 3772203 - 3772365
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaaga--acaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||  ||||||||| |     | || ||||||||| |||||||||| |  || || | |    
T  3772203 gaacttttattcaaagaagcaattgtcacttattatttccaagaacacaaaagattatttgttgtgattgctagctactctatttattgtttacaa-tga 3772301  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||||||||||||||| | || || |||||||||||||||| ||    ||||||||||||||    
T  3772302 cttaagccctaagaaatataacactacaatgttccacaagaaaccaaagacttttaggtcagaa 3772365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Original strand, 20059166 - 20059233
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||    
T  20059166 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 20059233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 148
Target Start/End: Complemental strand, 12347401 - 12347309
Alignment:
Q  57 ttgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||| || ||||  |||||||| |||||||| ||| | || || | ||||||||||||||| ||||||| ||||||||||||||||||||    
T  12347401 ttgtcacataaaattcacaagaacacaagatgaatataaaggtctggtggctgctctatttatatcctaaaagctaacttaagccctaagaaa 12347309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13622383 - 13622331
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  13622383 aagaacataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 13622331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 43701576 - 43701644
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  | |||||||||||||    
T  43701576 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagataacaaaagatgaa 43701644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 13622273 - 13622224
Alignment:
Q  147 aatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||||| ||||||||||||||||||| || | |||||||||||||||    
T  13622273 aatacatcactagaatgttccacaagaaatcaagggcttttaggtcagaa 13622224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10731228 - 10731176
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||| |||||    
T  10731228 aagaacgtaaaagtaaataacaataaaataaaggtgaacttttattccaagaa 10731176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10944997 - 10944945
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||| |||||    
T  10944997 aagaacgtaaaagtaaataacaataaaataaaggtgaacttttattccaagaa 10944945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 413
Target Start/End: Original strand, 16212600 - 16212691
Alignment:
Q  323 ttggaggcacgggctgtttcaccacaggcacgggctgtgtatgata-ttttgtgcaagatcttcatatttttgtcttcaatcagctccaaat 413  Q
    ||||||| |||||||||  ||||| |||||||||||| |  ||||| |||||  |||||||||||||||||||   ||||||| ||||||||    
T  16212600 ttggaggtacgggctgtgccaccataggcacgggctgcgcctgatatttttgcacaagatcttcatatttttggtctcaatcaactccaaat 16212691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 12506587 - 12506629
Alignment:
Q  106 gctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    |||||||||||||||||||||  ||||||||||||| ||||||    
T  12506587 gctgctctatttatagcctaatgctaacttaagcccaaagaaa 12506629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 414
Target Start/End: Original strand, 23793952 - 23793990
Alignment:
Q  376 caagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  23793952 caagatcttcatatttttggcctcaatcagctccaaatc 23793990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 55798427 - 55798315
Alignment:
Q  6 cataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataat-ttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||||||| ||||  |||||||||||  || ||||||||||||| |||  | |||||||   |||||||||| || | || | |||    
T  55798427 cataaaagtaaataacaataaagtaaaatgaacttttattagaa-aaacaattgtcacatattgtattccaag---aaaagatgaatatttgtgatggct 55798332  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  55798331 agctactctatttatag 55798315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 39043541 - 39043610
Alignment:
Q  53 acaattgtcacttata-atttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||||||  | ||||||||| |||||||||| |||| || | ||||||| ||||||||||||    
T  39043541 acaattgtcacttattgaattccaagaataaaagatgaatatatgtgatggctagctactctatttatag 39043610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 3672 - 3708
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  3672 tgctccaaatccctttcttttgctccaagactcaatc 3708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 480
Target Start/End: Complemental strand, 3355032 - 3354996
Alignment:
Q  445 gcttcaaaa-ccctttcttttgctccaagactcaatc 480  Q
    ||||||||| |||||||||||||||||||||||||||    
T  3355032 gcttcaaaatccctttcttttgctccaagactcaatc 3354996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 11496436 - 11496472
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  11496436 tgctccaaatccctttcttttgctccaagactcaatc 11496472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 13823306 - 13823270
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  13823306 tgctccaaatccctttcttttgctccaagactcaatc 13823270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 18241979 - 18241947
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  18241979 caaacccctttcttttgctccaagactcaatct 18241947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Original strand, 20059499 - 20059531
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  20059499 caaacccctttcttttgctccaagactcaatct 20059531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 26292987 - 26292951
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  26292987 tgctccaaatccctttcttttgctccaagactcaatc 26292951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 40845435 - 40845471
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  40845435 tgctccaaatccctttcttttgctccaagactcaatc 40845471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 42709553 - 42709589
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  42709553 tgctccaaatccctttcttttgctccaagactcaatc 42709589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 82)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 31965563 - 31965782
Alignment:
Q  26 aaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagccta 125  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31965563 aaataaagaaagcttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagccta 31965662  T
Q  126 aaactaacttaagccctaagaaatacatcaatagaatgttccacaa-gaaagcatgagcttt--taggtcagaattacactagaaaggtagctagatcag 222  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  ||| |||| |||||  ||  |||||||||||||| ||||| |  | ||||||    
T  31965663 aaactaacttaagccccaagaaatacatcaatagaatgttccacaacaaaaccatgggcttttatatatcagaattacactaaaaaggcatatggatcag 31965762  T
Q  223 ggagcaaaagcagcaaaagg 242  Q
    | ||||||||||||||||||    
T  31965763 gaagcaaaagcagcaaaagg 31965782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 29682692 - 29682481
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||||||||| ||| |||||||||| |||||||||| | |||||| |||||||||||| |||||||||||| |||||||||||||||||||    
T  29682692 aagaacataaaagtaaatagcaagaaaataaagaagaacttttatccaaagaaataattgtcacttagaatttccaagaataaaagatgaaaatatatgt 29682593  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa-gcatgagcttttaggtcagaatt 198  Q
     |||||||| |||||||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||  |||| ||||||||||||||| |    
T  29682592 ctgctagcttctctatttatagctaaaaactaacttaagccccaagaaatatatcaatagaatgttccacaagaaacccatgggcttttaggtcagaaat 29682493  T
Q  199 acactagaaagg 210  Q
    | |||| |||||    
T  29682492 aaactaaaaagg 29682481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20223004 - 20222856
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  20223004 aagaacataaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatgt 20222905  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    || |||| |||||||||||||||||||||||||||||||||| ||||||    
T  20222904 tttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 20222856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 22116988 - 22116840
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  22116988 aagaacataaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatgt 22116889  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    || |||| |||||||||||||||||||||||||||||||||| ||||||    
T  22116888 tttctagttgctctatttatagcctaaaactaacttaagccccaagaaa 22116840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 36 - 186
Target Start/End: Original strand, 23348176 - 23348325
Alignment:
Q  36 aacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaactt 135  Q
    ||||||||||| |||||||||||||||||  |||||||  ||||||||||||||| | || || ||||||||| |||||||||||| ||| |||| ||||    
T  23348176 aacttttattcaaagaaacaattgtcactattaatttcagagaacaaaagatgaataaatgtgattgctagctactctatttatagtctacaact-actt 23348274  T
Q  136 aagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttt 186  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||| |||||    
T  23348275 aagccccaagaaatacatcaatataatgttccacatgaaaccatgggcttt 23348325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 25949391 - 25949231
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    |||| | ||||||| |||||||||||| ||| || | |||    
T  25949391 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataa-tgact 25949293  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||  |||||| ||||||||| ||||||||||||||||||| || | |||||||||| ||||    
T  25949292 taaaacctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtaagaa 25949231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 20464442 - 20464300
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| | | ||||  | | | ||||||||||||||| ||| ||| |    
T  20464442 gagaacttttattcaaagaaacaattgtcacttataattttcaagaacaaaagatgaatagacatgtccgatggttgctctatttatagcttaatactga 20464343  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    |||||||||||||||||| |||| |||  |||| |||||||||    
T  20464342 cttaagccctaagaaataaatcactagcgtgttacacaagaaa 20464300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 16207753 - 16207883
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    ||||| |||||||| ||||||||||||||||||||||||||  | ||||||||||||    |||||||||||||||||||||||| ||| ||| |||| |    
T  16207753 gagaaattttattcaaagaaacaattgtcacttataatttctgaaaacaaaagatgactcaatatgtttgctagctgctctatttgtagtctacaact-a 16207851  T
Q  133 cttaagccctaagaaatacatcaatagaatgt 164  Q
    ||||| | ||||||||||||||||||||||||    
T  16207852 cttaatctctaagaaatacatcaatagaatgt 16207883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 20222466 - 20222355
Alignment:
Q  129 ctaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagca 228  Q
    |||| |||||||| |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||| ||||| | || ||||||| ||||    
T  20222466 ctaaattaagccccaagaaatacatcaatacaatgttccaaaagaaaccatgaccttttaggtcagaattacactaaaaaggcaactggatcaggaagca 20222367  T
Q  229 aaagcagcaaaa 240  Q
    ||||||||||||    
T  20222366 aaagcagcaaaa 20222355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 22116450 - 22116339
Alignment:
Q  129 ctaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagca 228  Q
    |||| |||||||| |||||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||| ||||| | || ||||||| ||||    
T  22116450 ctaaattaagccccaagaaatacatcaatacaatgttccaaaagaaaccatgaccttttaggtcagaattacactaaaaaggcaactggatcaggaagca 22116351  T
Q  229 aaagcagcaaaa 240  Q
    ||||||||||||    
T  22116350 aaagcagcaaaa 22116339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 25963991 - 25963786
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||    |||| | ||||||| |||||||||||| | | |||  |||    
T  25963991 gaactttaattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataac-gact 25963893  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagca 234  Q
    |||  |||||| ||||||||| |||||||||||||||||||  | | ||||||||||||||| || |||| | |||||||| |  | |  ||||||||||    
T  25963892 taaaacctaagcaatacatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaacta-ataggtagcttgtccggaaagcaaaagca 25963794  T
Q  235 gcaaaagg 242  Q
    ||||||||    
T  25963793 gcaaaagg 25963786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 35 - 242
Target Start/End: Complemental strand, 25968638 - 25968433
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||    |||| | ||||||| |||||||||||| | | |||  |||    
T  25968638 gaactttaattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataac-gact 25968540  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagca 234  Q
    |||  |||||| ||||||||| |||||||||||||||||||  | | ||||||||||||||| || |||| | |||||||| |  | |  ||||||||||    
T  25968539 taaaacctaagcaatacatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaacta-ataggtagcttgtccggaaagcaaaagca 25968441  T
Q  235 gcaaaagg 242  Q
    ||||||||    
T  25968440 gcaaaagg 25968433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 15172321 - 15172167
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattta 118  Q
    ||||||||||||| |||||||||||| |||  ||||| |||||| |  ||| |||||||| ||| |||||||   ||||||||||||||| |||||||||    
T  15172321 aataaaataaagatgaacttttattcaaaggaaaacagttgtcattattaaattccaagaccaagagatgaatcaatatgtttgctagctactctattta 15172222  T
Q  119 tagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  15172221 tagtctacaacta-cttaagccc-aagaaatacatcaatagaatgttccacgagaaa 15172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 25923427 - 25923569
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    |||| ||||||||| ||||||||||||  || |  | |||||||||||||||||||||    
T  25923427 acaattgtcactattgaattccaagaacaaaagatgaattgttatgattgctagctactctatttatagtttacat-tgacttaagccctaagaaataca 25923525  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||||||||||||| ||  ||||||||||||||||    
T  25923526 tcactagaatgttccacaagaaaccacaagcttttaggtcagaa 25923569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 18993243 - 18993100
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaata 150  Q
    ||||||||||||||  | | ||||||||||||||||||||  | | || | ||||||| ||||||||||||  || || | |||||||||||||||||||    
T  18993243 aaacaattgtcactattgaattccaagaacaaaagatgaatgt-tgtgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaata 18993146  T
Q  151 catcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     |||| ||||||||||||||||||| |||| |||||||||||||||    
T  18993145 tatcactagaatgttccacaagaaaccatgggcttttaggtcagaa 18993100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20221279 - 20221190
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||||| || ||||||||||||||||| |||||||||||||||||||||    
T  20221279 aagaacataaaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 20221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 22115263 - 22115174
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||||||||||||| |||||||||| ||||  |||||| || ||||||||||||||||| |||||||||||||||||||||    
T  22115263 aagaacataaaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 22115174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 210131 - 210250
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| ||||||||||||||||| || |||||  ||||||||||||||| || | || | |    
T  210131 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcactcattatttcagagaacaaaagatgaatatttgtgatgg 210230  T
Q  103 ctagctgctctatttatagc 122  Q
    |||||| |||||||||||||    
T  210231 ctagctactctatttatagc 210250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 20221187 - 20221083
Alignment:
Q  136 aagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcag 235  Q
    |||||| ||||||||||||||||||||||||||||||||| |||  | | |||||||||||||| |||| ||||| |||| ||||||| ||||||||||     
T  20221187 aagccccaagaaatacatcaatagaatgttccacaagaaaacat--ggtcttaggtcagaattatactaaaaaggcagctggatcaggaagcaaaagcaa 20221090  T
Q  236 caaaagg 242  Q
    |||||||    
T  20221089 caaaagg 20221083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 22115171 - 22115067
Alignment:
Q  136 aagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcag 235  Q
    |||||| ||||||||||||||||||||||||||||||||| |||  | | |||||||||||||| |||| ||||| |||| ||||||| ||||||||||     
T  22115171 aagccccaagaaatacatcaatagaatgttccacaagaaaacat--ggtcttaggtcagaattatactaaaaaggcagctggatcaggaagcaaaagcaa 22115074  T
Q  236 caaaagg 242  Q
    |||||||    
T  22115073 caaaagg 22115067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 24392885 - 24393039
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag-aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    ||||||||||||| |||||||||||| ||| |||||||| |||||   ||||||||||||||| ||||||    |||| |||| ||||| ||||||||||    
T  24392885 aataaaataaagatgaacttttattcaaaggaaacaattatcactataaatttccaagaacaagagatgattgaatatttttggtagctactctatttat 24392984  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||  || ||||| || |||||| |||||||||||||||||||| ||||||||||||    
T  24392985 agtttacaacta-ctaaagccccaagaaatacatcaatagaatattccacaagaaa 24393039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 25339287 - 25339429
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || ||||||||| ||||||||||||  || || | ||||||||||||||||||| |    
T  25339287 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgattgctagctactctatttatagtttacaa-tgacttaagccctaagaaatata 25339385  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||||||||||||| || | |||||||||||||||    
T  25339386 tcactagaatgttccacaagaaaccacgggcttttaggtcagaa 25339429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 18448870 - 18448752
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| ||| |  ||||||||||||||| || | || | |    
T  18448870 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattacagagaacaaaagatgaatatttgtgatgg 18448771  T
Q  103 ctagctgctctatttatag 121  Q
    |||||| ||||||||||||    
T  18448770 ctagctactctatttatag 18448752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 196
Target Start/End: Complemental strand, 18627512 - 18627333
Alignment:
Q  15 aaataacaataaaataaagagaacttttattctaagaa-acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctct 113  Q
    ||||||||| ||| |||| ||||||||||||  ||||| ||||||||||||  | | |||||| |||||||||||||    | || ||||||||| ||||    
T  18627512 aaataacaagaaagtaaa-agaacttttatta-aagaagacaattgtcactattgaattccaataacaaaagatgaattgttgtgattgctagctactct 18627415  T
Q  114 atttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||||  || || | ||||||||||||||||||| |||| ||||||||||||||| ||| |||| |||||||||||||||    
T  18627414 atttatagtttacaa-tgacttaagccctaagaaatatatcattagaatgttccacaaaaaaccatgggcttttaggtcagaa 18627333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 24218815 - 24218697
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |    
T  24218815 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatgg 24218716  T
Q  103 ctagctgctctatttatag 121  Q
    |||||| || |||||||||    
T  24218715 ctagctactttatttatag 24218697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 25402452 - 25402570
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    ||||| |||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || |||| | |    
T  25402452 aacattaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttatgatgg 25402551  T
Q  103 ctagctgctctatttatag 121  Q
    |||| | ||||||||||||    
T  25402552 ctagttactctatttatag 25402570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 18844559 - 18844443
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |||    
T  18844559 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggct 18844460  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  18844459 agctactctatttatag 18844443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 15471106 - 15471246
Alignment:
Q  35 gaacttttattctaagaaa--caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||| ||||||  ||||||||| |  ||| |||||||| ||| |||||||   ||||||||||||||| |||||||||||| ||| || | |    
T  15471106 gaacttttattcaaagaaaaacaattgtcattattaaattccaagaccaagagatgaatcaatatgtttgctagctactctatttatagtctacaaat-a 15471204  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||    
T  15471205 cttaagccc-aagaaatacatcaatagaatgttgcacgagaaa 15471246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 18973745 - 18973591
Alignment:
Q  22 aataaaataaaga-gaacttttattctaa-gaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    |||||| |||||| |||||||||||| || |||||||||||||||   ||||||||||||||| |||| |    ||||||||||||||| ||||||||||    
T  18973745 aataaactaaagatgaacttttattcaaaagaaacaattgtcactataaatttccaagaacaagagataattgaatatgtttgctagctactctatttat 18973646  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||  || ||||| || || ||| ||||||||||| |||||||| ||||||||||||    
T  18973645 agtttacaacta-ctaaaaccccaagaaatacattaatagaatattccacaagaaa 18973591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 25 - 180
Target Start/End: Original strand, 12660479 - 12660634
Alignment:
Q  25 aaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcc 123  Q
    |||||||||| |||||||||||| |||||||||||||||||||| |||| |||||| |||||||||  ||| | | | | | | |||||||||||||| |    
T  12660479 aaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcaagaaaaaaagatgattatacaagctagatggttgctctatttatagtc 12660578  T
Q  124 taaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatg 180  Q
    ||| | | |||| |||||||||||||| |||| || | |||| ||||||||| ||||    
T  12660579 taacattgacttgagccctaagaaata-atcactaaagtgttgcacaagaaaccatg 12660634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 132 - 240
Target Start/End: Complemental strand, 26821847 - 26821740
Alignment:
Q  132 acttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaa 231  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||| |||| || |||| | |||||||| |  || | |||||||    
T  26821847 acttaagccctaagaaatacatcaatagaatgtttcacaagaaaccatgggc-tttaggttagaaataaactaaataggtagcttgtacaagaagcaaaa 26821749  T
Q  232 gcagcaaaa 240  Q
    |||||||||    
T  26821748 gcagcaaaa 26821740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 17743581 - 17743526
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  17743581 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaa 17743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 18195537 - 18195636
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  18195537 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 18195636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 18233835 - 18233890
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  18233835 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaa 18233890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 24545652 - 24545794
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | |||||||| ||||||||||||    
T  24545652 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgacttaagctctaagaaataca 24545750  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||||||||||||| ||   |||||||||||||||    
T  24545751 tcactagaatgttccacaagaaaacacaggcttttaggtcagaa 24545794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 241
Target Start/End: Complemental strand, 4741050 - 4740843
Alignment:
Q  34 agaacttttattctaaga-aacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||| |||||||| |||| |||||||||||||  |||||||  |||||||||||||||    |||| | ||||||| || |||||||||  || || | |    
T  4741050 agaatttttattcaaagagaacaattgtcactattaatttcagagaacaaaagatgaattgttatgatagctagctactatatttatagtttacaa-tga 4740952  T
Q  133 cttaagccctaagaaataca-tcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaa 231  Q
    |||||||||||||||||| | ||| |||||||||||||||||||  | | ||||||||||||||| || |||| | |||||||| |  |||| |||| ||    
T  4740951 cttaagccctaagaaatataatcactagaatgttccacaagaaactacgggcttttaggtcagaagtaaacta-ataggtagcttgtccaggaagcagaa 4740853  T
Q  232 gcagcaaaag 241  Q
    |||| |||||    
T  4740852 gcaggaaaag 4740843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 22 - 175
Target Start/End: Complemental strand, 15162283 - 15162129
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctattta 118  Q
    |||||| |||||| |||||||||||| |||  |||||||||||  |  ||| |||||||| ||| |||||||   | |||| ||||||||  ||||||||    
T  15162283 aataaagtaaagatgaacttttattcaaaggaaaacaattgtctttattaacttccaagaccaagagatgaatcaacatgtatgctagctattctattta 15162184  T
Q  119 tagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||| ||| ||||| ||||||||| ||||||||||||||||||||||||||| |||||    
T  15162183 tagtctacaacta-cttaagccc-aagaaatacatcaatagaatgttccacgagaaa 15162129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 34 - 186
Target Start/End: Original strand, 28734159 - 28734312
Alignment:
Q  34 agaacttttattctaagaaa-caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||| |||||||| |||||| |||||||||||  ||| |||| ||||||||||||||  ||| | | ||  | |||||||||||||||| |||| | | |    
T  28734159 agaaattttattcaaagaaagcaattgtcactattaaattccgagaacaaaagatgattatacaagctttatggctgctctatttatagtctaacaatga 28734258  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttt 186  Q
    |||||||||||||||||| |||| || | |||| ||||||||| || |||||||    
T  28734259 cttaagccctaagaaataaatcactaaagtgttgcacaagaaaccacgagcttt 28734312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 18854717 - 18854601
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||  |||||  ||||||||||||||| || | ||   |||    
T  18854717 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttaatatttcagagaacaaaagatgaatatttgtgacggct 18854618  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  18854617 agctactctatttatag 18854601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 19993642 - 19993501
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    |||| | ||||||| ||||||| ||||  || || | ||||||| |||| |||||| |    
T  19993642 acaattgtcactattgaattccaagaacaaaagatgaattgttatgatagctagctactctatt-atagtttacaa-tgacttaagacctatgaaatata 19993545  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||||||||||||| || |||||||||||||||||    
T  19993544 tcactagaatgttccacaagaaaccacgagcttttaggtcagaa 19993501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 25031237 - 25031379
Alignment:
Q  34 agaacttttattctaagaaa-caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    ||||||||||||| |||||| |||||||||||  |||||||  ||||||||||||||  ||| | | ||| | | |||||||||||||| | || | | |    
T  25031237 agaacttttattcaaagaaaacaattgtcactattaatttcagagaacaaaagatgattatacaagcttgatggttgctctatttatagtccaacattga 25031336  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    |||||||||||||||||| |||| || | |||| |||||||||    
T  25031337 cttaagccctaagaaataaatcactaaagtgttgcacaagaaa 25031379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 29093589 - 29093468
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| | ||||||| |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||||||||||||||    
T  29093589 ttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 29093491  T
Q  171 agaaagcatgagcttttaggtca 193  Q
    ||||| ||   ||||||||||||    
T  29093490 agaaaccacaggcttttaggtca 29093468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 29686815 - 29686719
Alignment:
Q  146 aaatacatcaatagaatgttccacaagaaa-gcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
    ||||||||||||||||||||||||||||||  |||| ||||||| ||||||| || |||| ||| | |||| ||||| | ||||||||||||||||||    
T  29686815 aaatacatcaatagaatgttccacaagaaacccatgggcttttaagtcagaaataaacta-aaaagcagctggatcaagaagcaaaagcagcaaaagg 29686719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 32543290 - 32543166
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||| ||||||||||    |||| | ||||||| |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||| ||||||||||    
T  32543290 ttccaagaataaaagatgaattattatgatagctagctactctatttatagtctataacga-cttaaaacctaagcaatacatcactaggatgttccaca 32543192  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || | |||||||||||||||    
T  32543191 agaaaccaagggcttttaggtcagaa 32543166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 18184401 - 18184500
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||| ||| || | || | | ||||| ||||||||||||    
T  18184401 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagaagaatatttgtgatggatagctactctatttatag 18184500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 369 - 416
Target Start/End: Complemental strand, 18779841 - 18779794
Alignment:
Q  369 ttttgtgcaagatcttcatatttttgtcttcaatcagctccaaatcat 416  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  18779841 ttttgtacatgatcttcatatttttgtcttcaatcagctccaaatcat 18779794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 30245297 - 30245242
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||| || ||||||||||||||||| |||||||||||||||| |||||    
T  30245297 gaacttttattcaaataaacaattgtcacttattatttccaagaacaaaatatgaa 30245242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 20218523 - 20218647
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||| ||||||||||||||| | ||  |||||||||||||    
T  20218523 ttccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgactcaagccctaagaaatataacaccagaatgttccaca 20218621  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || | |||||||||||||||    
T  20218622 agaaaccacgggcttttaggtcagaa 20218647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 20222862 - 20222789
Alignment:
Q  169 caagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
    ||||||| ||||  |||||||||  |||||| |||| |||||||||||||||||| |||||||||| |||||||    
T  20222862 caagaaaacatggacttttaggtttgaattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaagg 20222789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 22112548 - 22112672
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    | || | ||||||| ||||||||||||  || || | ||| ||||||||||||||| | ||  |||||||||||||    
T  22112548 ttccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttacaa-tgactcaagccctaagaaatataacaccagaatgttccaca 22112646  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || | |||||||||||||||    
T  22112647 agaaaccacgggcttttaggtcagaa 22112672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 22116846 - 22116773
Alignment:
Q  169 caagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
    ||||||| ||||  |||||||||  |||||| |||| |||||||||||||||||| |||||||||| |||||||    
T  22116846 caagaaaacatggacttttaggtttgaattatactaaaaaggtagctagatcaggaagcaaaagcaacaaaagg 22116773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5399309 - 5399257
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  5399309 aagaacataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 5399257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 9414413 - 9414357
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||||||||| |||||| |||||||||| | |||| ||||||||||||||||||    
T  9414413 agaacttttattcaaagaaataattgtcactaagaattcccaagaacaaaagatgaa 9414357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 19612856 - 19612919
Alignment:
Q  132 acttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||||||| | |||||| |||||||||||||||||||||||| |||| || ||||||||||||    
T  19612856 acttaagccccatgaaatatatcaatagaatgttccacaagaaaccatgggc-tttaggtcagaa 19612919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 20222717 - 20222649
Alignment:
Q  347 caggcacgggctgtgtatgatatttt-gtgcaagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||  | |||||||||||||||||    
T  20222717 caggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaatc 20222649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 414
Target Start/End: Complemental strand, 22116701 - 22116633
Alignment:
Q  347 caggcacgggctgtgtatgatatttt-gtgcaagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    |||||||||||||||| ||||||||| |  ||||||||||||||||||  | |||||||||||||||||    
T  22116701 caggcacgggctgtgtttgatatttttgcacaagatcttcatattttttgcctcaatcagctccaaatc 22116633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32543334 - 32543282
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  32543334 aagaacataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 32543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 12658029 - 12658109
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaa 82  Q
    ||||||||||||  ||||||  | |||||||||| |||||||||||| |||||||||||||| ||||| |||||||| |||||    
T  12658029 aagaacataaaataaaataa--agaaaataaagatgaacttttattcaaagaaacaattgtcgcttattatttccaacaacaa 12658109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 13168074 - 13167972
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatcctt-ttatccttaaatcatgcttcaaaaccctttcttttgctccaagactca 477  Q
    |||||||||||||||| | ||||||| | || |||||||||| ||||||||  | ||||| || |||||| ||||||||| |||||||||| || |||||    
T  13168074 gatcttcatatttttggcctcaatcaaccccgaatcatgctctagatccttcctttcctt-aaccatgctccaaaaccctatcttttgctcaaacactca 13167976  T
Q  478 atct 481  Q
    ||||    
T  13167975 atct 13167972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 13168359 - 13168277
Alignment:
Q  68 aatttccaagaacaaaagatgaaa-atatatgtttgctagctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    |||| ||||||||||||||||||  ||| | || || | ||||||||||||||||||||||| |||||||||| |||||||||    
T  13168359 aattcccaagaacaaaagatgaatcataaaggtctggtggctgctctatttatagcctaaaagctaacttaagacctaagaaa 13168277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 18396545 - 18396671
Alignment:
Q  54 caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacat 153  Q
    |||||||||||  | | |||||||||||||||||||  ||| | | | | | |||||||||||||||| |||| | | |||| |||||||||||||| ||    
T  18396545 caattgtcactattgaattccaagaacaaaagatgattatacaagctagatggctgctctatttatagtctaacattgacttgagccctaagaaataaat 18396644  T
Q  154 caatagaatgttccacaagaaagcatg 180  Q
    || || | |||| ||||||||| ||||    
T  18396645 cactaaagtgttgcacaagaaaccatg 18396671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31965507 - 31965544
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagagaac 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  31965507 aagaacataaaagtaaataacaagaaaataaagagaac 31965544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 32796647 - 32796688
Alignment:
Q  108 tgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  32796647 tgctctatttatagcctaaaagctaacttaagccctaagaaa 32796688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 17794083 - 17794146
Alignment:
Q  132 acttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||| || ||||||||||||| |||||||||||||||||||  ||| || ||||||||||||    
T  17794083 acttaagacccaagaaatacatcagtagaatgttccacaagaaactatgggc-tttaggtcagaa 17794146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 26821940 - 26821875
Alignment:
Q  22 aataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||||  |||||||||  |||||| ||||||||||||| | |||||||||||||| ||||    
T  26821940 aataaaataaaga--acttttattaaaagaaataattgtcacttattaattccaagaacaaaatatga 26821875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 3923713 - 3923658
Alignment:
Q  34 agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||| ||| |||||||||||||  |||||||  ||||||||||||||    
T  3923713 agaacttttattcaaagtaacaattgtcactattaatttcagagaacaaaagatga 3923658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 86
Target Start/End: Complemental strand, 25507651 - 25507616
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaaga 86  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25507651 aaacaattgtcacttattatttccaagaacaaaaga 25507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 121
Target Start/End: Complemental strand, 25775133 - 25775006
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga---------gaacttttattctaagaaacaattgtcacttata-atttccaagaacaaaagatgaaaat 93  Q
    |||||||||||||||||||| ||||||||||         |||||||||||   | | |||||||||||||||  | |||||||||||||||||||| ||    
T  25775133 aacataaaagtaaataacaagaaaataaagaaaaagaaaagaacttttattaagaaagacaattgtcacttattgaattccaagaacaaaagatgaatat 25775034  T
Q  94 atatgtttgctagctgctctatttatag 121  Q
     | || | ||||||| ||||||||||||    
T  25775033 ttgtgatggctagctactctatttatag 25775006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 155
Target Start/End: Original strand, 13217406 - 13217455
Alignment:
Q  106 gctgctctatttatagcctaaaactaacttaagccctaagaaatacatca 155  Q
    |||||||||||||||| |||| | | ||||||||||||||||||| ||||    
T  13217406 gctgctctatttatagtctaacaatgacttaagccctaagaaataaatca 13217455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 24545957 - 24545990
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatctt 482  Q
    |||| |||||||||||||||||||||||||||||    
T  24545957 caaatccctttcttttgctccaagactcaatctt 24545990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 5949655 - 5949707
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||| |||||    
T  5949655 aagaacataaaagtaaataatagtaaaataaaggtgaacttttattccaagaa 5949707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 6478950 - 6478914
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  6478950 tgctccaaatccctttcttttgctccaagactcaatc 6478914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 6490371 - 6490335
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  6490371 tgctccaaatccctttcttttgctccaagactcaatc 6490335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6795030 - 6794978
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||| | ||||||||| | |||||||||||| |||||    
T  6795030 aagaacataaaagtaaataatagtaaaataaaggtgaacttttattccaagaa 6794978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 8603590 - 8603508
Alignment:
Q  10 aaagtaaataacaataaaataaaga--gaacttttattctaagaaacaattgtcacttata-atttccaagaacaaaagatgaa 90  Q
    ||||||||||||||  |||||||||  |||||||||||  || | |||||||||||||||  | ||||||||||||||||||||    
T  8603590 aaagtaaataacaaagaaataaagaaagaacttttattagaa-agacaattgtcacttattgaattccaagaacaaaagatgaa 8603508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 15699948 - 15699912
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  15699948 tgctccaaatccctttcttttgctccaagactcaatc 15699912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 18461057 - 18461021
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18461057 tgctccaaatccctttcttttgctccaagactcaatc 18461021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 20022617 - 20022653
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20022617 tgctccaaatccctttcttttgctccaagactcaatc 20022653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 22165371 - 22165407
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22165371 tgctccaaatccctttcttttgctccaagactcaatc 22165407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 22244205 - 22244169
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  22244205 tgctccaaatccctttcttttgctccaagactcaatc 22244169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 22343507 - 22343475
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  22343507 caaatccctttcttttgctccaagactcaatct 22343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 414
Target Start/End: Original strand, 31965867 - 31965935
Alignment:
Q  347 caggcacgggctgtgtatgatatttt-gtgcaagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    |||||||||| ||||  ||||||||| |  ||||||||||||||||||| | ||||||| |||||||||    
T  31965867 caggcacgggttgtgcctgatatttttgcacaagatcttcatatttttggcctcaatcaactccaaatc 31965935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 131; Significance: 9e-68; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 4 - 295
Target Start/End: Original strand, 24221542 - 24221835
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    ||||| |||||||||||||| |||||||| | |||||||||||| |||||| |||||||||||| ||||||||||||||||| ||||   ||||||||||    
T  24221542 aacatgaaagtaaataacaagaaaataaatatgaacttttattcaaagaaataattgtcacttagaatttccaagaacaaaaaatgattgtatatgtttg 24221641  T
Q  103 ctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacac 202  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||| || ||    
T  24221642 ctagttgctctatttatagtctaaaactaacttaagccctaagaaatccatcaatagaatgttccacaagaaaccatgggc-tttaggtcagaaataaac 24221740  T
Q  203 t-agaaaggtagctagatcagggagcaaaagcagcaaaagggttggt-acagtcgcacacggtcgtgtagctggaggcacgagccgtgtgctcct 295  Q
    | | ||||| |||| ||||||| ||||||||||||||| ||  || |  |||| |||||||| |||||  |||||| |||| ||||| |||||||    
T  24221741 taaaaaaggcagcttgatcaggaagcaaaagcagcaaacggagtgctgtcagttgcacacggccgtgtgtctggagacacgggccgtatgctcct 24221835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 22904698 - 22904520
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||| || |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    ||||||    
T  22904698 aagaatatgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgt 22904599  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatg 180  Q
    |||||||||||| ||||||||||||| |||| |||| ||||| || |||||||||||||||||||||||||||||| ||||    
T  22904598 ttgctagctgct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatg 22904520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 380 - 479
Target Start/End: Original strand, 31470093 - 31470192
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaat 479  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||  || | | || |||||| |||||||||||||||||||||||||||||||    
T  31470093 atcttcatatttttggcttcaatcagctccaaatcatgctctagatccttccattccttaaccatgctccaaaaccctttcttttgctccaagactcaat 31470192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 24342152 - 24341985
Alignment:
Q  4 aacataaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgc 103  Q
    |||||||||  ||||| ||| ||||||||||  |||||||||  |||||||||||||||||||| ||||| |||||||||||||||  ||| | | |||     
T  24342152 aacataaaataaaatagcaagaaaataaaga--acttttattaaaagaaacaattgtcacttattatttctaagaacaaaagatgattatacaagcttga 24342055  T
Q  104 tagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaaga 173  Q
    |  |||||||||||||||||||| | | ||||||||||||||||||| |||| || | |||| |||||||    
T  24342054 tgactgctctatttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaaga 24341985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 14162161 - 14162329
Alignment:
Q  26 aaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcct 124  Q
    ||||||||| |||||||||||| || ||||||||||||||||| |||||  ||||||||||||||     | ||  |||||||| ||||||||||||  |    
T  14162161 aaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtgactgctagctactctatttatagttt 14162260  T
Q  125 aaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcag 194  Q
    | || | ||||||| ||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  14162261 acaa-tgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcag 14162329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 23221530 - 23221690
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||||    |||| | | ||||| ||||||||||||  || | | | ||    
T  23221530 gaacttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatgaattgttatgatagttagctactctatttatagtttatatcga-ct 23221628  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||| |||| ||||||||| |||||||||||||| |||| |||| |||||||||||||||    
T  23221629 taagccataagcaatacatcactagaatgttccacatgaaaccatgggcttttaggtcagaa 23221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 25 - 175
Target Start/End: Original strand, 19792242 - 19792393
Alignment:
Q  25 aaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcc 123  Q
    |||||||||| ||| |||||||  |||||||||||||||||||| |||||||||||| ||||||||  ||| | | ||| |  ||||||||||||||| |    
T  19792242 aaaataaagatgaatttttatttaaagaaacaattgtcacttattatttccaagaactaaagatgattatacaagcttgatgtctgctctatttatagtc 19792341  T
Q  124 taaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||| | | ||||||||||||||||||| |||| || | |||| |||||||||    
T  19792342 taacaatgacttaagccctaagaaataaatcactaaagtgttgcacaagaaa 19792393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 193
Target Start/End: Complemental strand, 26013059 - 26012888
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||    |||| | |||| || ||||||||||||    
T  26013059 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctaactactctatttatag 26012960  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
     || |     ||||||  |||||| ||   |||| ||||||||||||||||||| || | ||||||||||||    
T  26012959 tcttatgtcgacttaaaacctaagcaactaatcactagaatgttccacaagaaaccacgggcttttaggtca 26012888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 193
Target Start/End: Complemental strand, 25397001 - 25396843
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||  |   || | ||||||| |||||||||||| || | |   |||    
T  25397001 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatgttattgatagctagctactctatttatagtcttatatcgact 25396902  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    |||  |||||| |||   |||||||||||||| |||||||| || | |||||| |||||    
T  25396901 taaaacctaagcaattattcaatagaatgttctacaagaaaccacgggcttttcggtca 25396843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 6279806 - 6279653
Alignment:
Q  23 ataaaataaag-agaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||| |||||  ||| |||||||||||    | || | ||||||| ||||||||||||    
T  6279806 ataaaataaaggagaacttttattcaaagaaacaattgtcacttattatttcagagagcaaaagatgaattgttgtgatagctagctactctatttatag 6279707  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
      || |    ||||||  |||||| ||||||||| |||||||||||||||||||    
T  6279706 tttacattcgacttaaaacctaagcaatacatcactagaatgttccacaagaaa 6279653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 122
Target Start/End: Original strand, 17515800 - 17515919
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||| ||||||| | ||| |||||  |||||||||||| |||||||||||||||||||| |||||  | ||||||| ||||| || | || | |    
T  17515800 aacataaaagaaaataacgagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcttataacaaaatatgaatatttgtgatgg 17515899  T
Q  103 ctagctgctctatttatagc 122  Q
    |||||| |||||||||||||    
T  17515900 ctagctactctatttatagc 17515919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 23193980 - 23194035
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||    
T  23193980 gaacttttattcaaagaaacaattgtcagttattatttccaagaacaaaagatgaa 23194035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 14351660 - 14351746
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| ||| |||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  14351660 gaacttttattcaaaggaacaattgtcacttattatttcatagaacaaaagatgaatatctgtgatggctagctactctatttatag 14351746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 14878317 - 14878399
Alignment:
Q  39 ttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||| |||||||||||||||||||| |||| |||||| |||||||||| || | || | ||||||| ||||||||||||    
T  14878317 ttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatgaatatttgtgatggctagctactctatttatag 14878399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 21139766 - 21139571
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaagaga--acttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatg 98  Q
    |||||||||||| ||||||||||  ||||||||| |  |||||||||   | | ||||||||||||  | | ||||||||||||||||||||    | ||    
T  21139766 aagaacataaaa-taaataacaaagaaataaagaaataacttttattaagaaagacaattgtcactattgaattccaagaacaaaagatgaattgttgtg 21139668  T
Q  99 tttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     | ||||||| ||||||||||||  || || | ||||||  ||| || ||||||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  21139667 atagctagctactctatttatagtttacaa-tgacttaaaacctgagtaatacatcactagaatgttccacaagaaaccatggacttttaggtcagaa 21139571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 18162079 - 18162011
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  18162079 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 18162011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9317932 - 9317880
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  9317932 aagaacataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 9317880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 7465513 - 7465556
Alignment:
Q  106 gctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  7465513 gctgctctatttatagcctaaaagctaacttaagccctaagaaa 7465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 186
Target Start/End: Complemental strand, 18008143 - 18008056
Alignment:
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacat--caatagaatgttccacaagaaagcatgagcttt 186  Q
    ||||||||| |||||||||||| ||| ||| ||||||||||| |||| ||| ||  ||||||||||||||||||| || |||| |||||    
T  18008143 ttgctagctactctatttatagtctacaac-aacttaagccccaagatatatatatcaatagaatgttccacaaggaaccatgggcttt 18008056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 1990515 - 1990545
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataa 31  Q
    |||||||||||||||||||||||||||||||    
T  1990515 aagaacataaaagtaaataacaataaaataa 1990545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24967349 - 24967303
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattc 46  Q
    |||||||||||||||||||| ||||||||||| | ||||||||||||    
T  24967349 aagaacataaaagtaaataagaataaaataaaggtgaacttttattc 24967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 14162492 - 14162525
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatctt 482  Q
    |||| |||||||||||||||||||||||||||||    
T  14162492 caaatccctttcttttgctccaagactcaatctt 14162525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 20263153 - 20263121
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  20263153 caaacccctttcttttgctccaagactcaatct 20263121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 21382487 - 21382451
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  21382487 tgctccaaatccctttcttttgctccaagactcaatc 21382451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 22991067 - 22991035
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  22991067 caaatccctttcttttgctccaagactcaatct 22991035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 168293 - 168099
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||||  |||||| |||||||||||| ||||||||||||||||||||||  | ||||||    
T  168293 aagaacataaaagtaaataacaagaaaataaagaagaa--tttatttaaagaaataattgtcacttagaatttccaagaacaaaagatgattagatatgt 168196  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa-gcatgagcttttaggtcagaa 196  Q
     ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||||    
T  168195 ctgctagctgctct-tttatagcctaaaactaacttaagcccaaagaaatacatcaatagaatgttccacaagaaactcatgggcttttaggtcagaa 168099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 167896 - 167858
Alignment:
Q  376 caagatcttcatatttttgtcttcaatcagctccaaatc 414  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  167896 caagatcttcatatttttggcctcaatcagctccaaatc 167858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 3e-46; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 242
Target Start/End: Original strand, 11869836 - 11870064
Alignment:
Q  13 gtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgct 111  Q
    ||||||||||| |||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||||||    ||||| ||||||||| ||    
T  11869836 gtaaataacaagaaaataaagatgaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgcttgctagctact 11869935  T
Q  112 ctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggt 211  Q
    |||||||||| ||| |||| |||||||||| | |||||||||||||||||||||||||||||||  ||| || |||||||||||| || |||| | |||     
T  11869936 ctatttatagtctacaact-acttaagccccaggaaatacatcaatagaatgttccacaagaaactatgggc-tttaggtcagaaataaactaaacaggc 11870033  T
Q  212 agctagatcagggagcaaaagcagcaaaagg 242  Q
    |||| |  |  | ||||||||||||||||||    
T  11870034 agcttgtccgagaagcaaaagcagcaaaagg 11870064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 8685849 - 8686009
Alignment:
Q  15 aaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctct 113  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    |||||||| |||||| ||||    
T  8685849 aaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgttttctagctactct 8685948  T
Q  114 atttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    |||||||| ||| |||| |||||||||| |||||||||||||||| ||||||||||||||||    
T  8685949 atttatagtctacaact-acttaagccccaagaaatacatcaataaaatgttccacaagaaa 8686009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 186
Target Start/End: Complemental strand, 8531979 - 8531806
Alignment:
Q  15 aaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataat--ttccaagaacaaaagatgaaaatatatgtttgctagctgct 111  Q
    ||||||||| |||||||||| |||||||||||| ||||||||| |||||||||| ||  ||| || || ||||||||||   ||||||||||||||| ||    
T  8531979 aaataacaagaaaataaagatgaacttttattcaaagaaacaaatgtcacttattatatttctaaaaataaaagatgaatgaatatgtttgctagctact 8531880  T
Q  112 ctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttt 186  Q
    |||||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  8531879 ctatttatagtctataacta-cttaagccccaagaaatacatcaatagaatgttccacaagaaagcatgggcttt 8531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 41545774 - 41545915
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    ||||||||||||| | |||||||||||| ||| |||| |    
T  41545774 gagaacttttattcaaagaaacatttgtcacttataatttccaagaacaaaagatgattcaatatgtttgctaggtactctatttatagtctacaact-a 41545872  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  41545873 cttaagccccaagaaatacatcaataaaatgttccacaagaaa 41545915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 16703860 - 16703719
Alignment:
Q  35 gaacttttattctaag-aaacaattgtcacttat-aatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||| ||||| ||||||    || ||||||||||||||||||||||||| ||| |||||     
T  16703860 gaacttttattcaaaggaaacaattgtcacttattaatttccaaaaacaagagatgattcaatttgtttgctagctgctctatttatagtctataacta- 16703762  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  16703761 cttaagccccaagaaatacatcaatagaattttccacaagaaa 16703719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 42244538 - 42244729
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    ||||||||||||  ||||||  | |||||||||| |||||||||||| || ||||||||||||||||| |||||  ||||||||||||||     | ||     
T  42244538 aagaacataaaataaaataa--agaaaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtgg 42244635  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcag 194  Q
     |||||||| ||||||||||||  || || | ||||||| ||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  42244636 ctgctagctactctatttatagtttacaa-tgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcag 42244729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17023334 - 17023247
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||| |||||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  17023334 aagaacataaaa-taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatg 17023247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 11398970 - 11398752
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||    | || | ||||||| || |||||||||    
T  11398970 ataaaataaaggtgaacttttattcaaagaaacatttgtcccttattatttccaagaacaaaagatgaattgttgtgatagctagctactttatttatag 11398871  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatca 221  Q
     || | ||  ||||||  |||||  ||||||| | ||||||||||||||||||| || | ||||||||||||||| || |||| | |||||||| |  ||    
T  11398870 tct-ataccgacttaaaacctaaacaatacattactagaatgttccacaagaaaccaagggcttttaggtcagaaataaacta-ataggtagcttgtcca 11398773  T
Q  222 gggagcaaaagcagcaaaagg 242  Q
    |  ||||||||||||||||||    
T  11398772 gaaagcaaaagcagcaaaagg 11398752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 13069851 - 13069783
Alignment:
Q  22 aataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  13069851 aataaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 13069783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 241
Target Start/End: Complemental strand, 17041783 - 17041594
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatata-tgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaat 149  Q
    ||||||||||||||||| ||||| ||||||||||||||||  | || || | ||||||| ||||||||||||  || || | ||||||||||||||||||    
T  17041783 aaacaattgtcacttattatttcgaagaacaaaagatgaat-tgtagtgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaat 17041686  T
Q  150 acatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagc-aaaagcagcaaaag 241  Q
    | |  | ||||||||||||||||||| || | ||||||||||||||| || |||| | |||||||| | || || ||| ||||||||||||||    
T  17041685 ataagagtagaatgttccacaagaaaccacgggcttttaggtcagaaataaacta-ataggtagcttgttcgggaagcaaaaagcagcaaaag 17041594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 2721998 - 2721912
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||||||||||| ||||||||||| |||||||||| || | || | ||||||| ||||||||||||    
T  2721998 gaacttttattcaaagaaacaattgtcacttattatttccaagaataaaagatgaatatttgtgatggctagctactctatttatag 2721912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 27992760 - 27992858
Alignment:
Q  50 gaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    |||| ||||||||| || |||| |||||||||||||||||| | |||||| || | ||| |||||||||||||||||| ||| ||||||||||||||||    
T  27992760 gaaataattgtcacataaaattcccaagaacaaaagatgaagagatatgtctggtggctactctatttatagcctaaagctagcttaagccctaagaaa 27992858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 43842060 - 43842170
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||| || | || | |||    
T  43842060 cataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaaaatgaatatttgtgatggct 43842159  T
Q  105 agctgctctat 115  Q
    |||| ||||||    
T  43842160 agctactctat 43842170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 19656097 - 19656213
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||| || | || | |||    
T  19656097 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaa-caattgtcacttattatttccgagaacaaaagatgaatatttgtgatggct 19656195  T
Q  105 agctgctctatttatagc 122  Q
    |||| |||||||||||||    
T  19656196 agctactctatttatagc 19656213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 196
Target Start/End: Complemental strand, 13418433 - 13418291
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | |||| || ||||||||||||  || || | |||||||||||| |||||| |    
T  13418433 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctaactactctatttatagtttacaa-tgacttaagccctacgaaatata 13418335  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||||||||||||| || |||||||||||||||||    
T  13418334 tcactagaatgttccacaagaaaccacgagcttttaggtcagaa 13418291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 14494826 - 14494925
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  14494826 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 14494925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 27407312 - 27407115
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaag---agaacttttattctaagaa-acaattgtcacttata-atttccaagaacaaaagatgaaaatat 95  Q
    ||||||||||||||||||||||| ||| ||||    | ||||||||||  ||||| |||||||||||||||  ||||| | ||||||||||||||    |    
T  27407312 aagaacataaaagtaaataacaagaaagtaaaagaaataacttttatt--aagaagacaattgtcacttattgatttctaggaacaaaagatgaattgtt 27407215  T
Q  96 atgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcaga 195  Q
     || | ||||||| ||||||||||||  || || | | ||||||||||||||||| | || ||||||||||||||||||| || | ||||||||||||||    
T  27407214 gtgatagctagctactctatttatagtttacaa-tgatttaagccctaagaaatataacactagaatgttccacaagaaaccacgggcttttaggtcaga 27407116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 411 - 482
Target Start/End: Original strand, 27993135 - 27993206
Alignment:
Q  411 aatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    |||||||||| ||||||||| |||||| ||||||||| ||||||| ||||||||||||||||||| ||||||    
T  27993135 aatcatgctctagatcctttaatcctttaatcatgctccaaaaccttttcttttgctccaagactaaatctt 27993206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11577785 - 11577874
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    ||||||||||||||||| |||||||||||||| | || ||||||||| | |||| ||||||||| || |||| |||||||||||||||||    
T  11577785 aagaacataaaagtaaacaacaataaaataaaggtgatcttttattcaatgaaataattgtcacctagaattcccaagaacaaaagatga 11577874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 7908569 - 7908383
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | |||||||||||||||||||     |||| | ||||||| ||||||||||||  || || | ||||||||||||||||||| |    
T  7908569 acaattgtcactattgaattccaagaacaaaagatgatttgttatgatagctagctactctatttatagtttacaa-tgacttaagccctaagaaatata 7908471  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaag 241  Q
     || ||||||||||||||||||| || |  |||||||||||||| || |||| | |||||||| | ||  | |||| ||||||||||||    
T  7908470 acactagaatgttccacaagaaaccacggacttttaggtcagaaataaacta-ataggtagcttgttcttgaagcagaagcagcaaaag 7908383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 14976310 - 14976409
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| || |||||||||    
T  14976310 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactatatttatag 14976409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 17209645 - 17209553
Alignment:
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||| ||||||||||||  || || | ||||||||||||||||| |||||| |||||||||||||||| || |||| |||||||||||||||    
T  17209645 gctagctactctatttatagtttacaa-tgacttaagccctaagaaacacatcactagaatgttccacaag-aaccatgggcttttaggtcagaa 17209553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 196
Target Start/End: Complemental strand, 17050793 - 17050649
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaata 150  Q
    ||||||||| ||||||| ||||||||||||||||||||||    | || | |||| || ||||||||||||  || || | ||||||||| |||||||||    
T  17050793 aaacaattgccacttattatttccaagaacaaaagatgaattgttgtgatagctaactactctatttatagtttacaa-tgacttaagccttaagaaata 17050695  T
Q  151 catcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     |  | ||||||||||||||||||| || | |||||||||| ||||    
T  17050694 taagactagaatgttccacaagaaaccacgggcttttaggttagaa 17050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 13605006 - 13604950
Alignment:
Q  140 cctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||| ||||||||| || |||||||||||||||| ||||||||||||||||||||    
T  13605006 cctaagcaatacatcactataatgttccacaagaaaccatgagcttttaggtcagaa 13604950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 25765832 - 25765884
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaa 52  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  25765832 aagaacataaaagtaaataacaataaaataaagatgaacttttattccaagaa 25765884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 6236940 - 6236873
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||    
T  6236940 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 6236873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 196
Target Start/End: Original strand, 11827454 - 11827596
Alignment:
Q  53 acaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaataca 152  Q
    ||||||||||||  | | ||||||||||||||||||||    | || | ||||||| |||||||||| |  ||||| | |||||| |||||||||||| |    
T  11827454 acaattgtcactattgaattccaagaacaaaagatgaattgttgtgatagctagctactctatttattgtttaaaa-tgacttaaaccctaagaaatata 11827552  T
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||| ||||||||| ||||| ||| || | |||||||||||||||    
T  11827553 tcactagaatgtttcacaataaaccacgggcttttaggtcagaa 11827596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 34053626 - 34053681
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  34053626 gaactttgattcaaagaaacaattgtcacttattatttccaagaacagaagatgaa 34053681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 242
Target Start/End: Complemental strand, 36076226 - 36076057
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    |||||| |||||||||||||    |||| | |||| || |||||||||||| ||| ||| | |||||  |||||| ||||||||| ||||||||||||||    
T  36076226 ttccaataacaaaagatgaattgttatgatagctaactactctatttatagtctataacga-cttaaaacctaagcaatacatcactagaatgttccaca 36076128  T
Q  171 agaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaagg 242  Q
    ||||| || | |||||||||| |||| || |||| | |||||||| |  |||  ||||||| ||||||||||    
T  36076127 agaaaccaagggcttttaggtaagaaataaacta-ataggtagcttgtccagaaagcaaaatcagcaaaagg 36076057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 14660810 - 14660892
Alignment:
Q  39 ttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||| |||||||||||||||||||| |||||  |||||||||||||||  | | || | ||||||| ||||||||||||    
T  14660810 ttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatctttgtgatggctagctactctatttatag 14660892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 25055067 - 25054943
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| | |||| || |||||||||||| ||| ||| | |||||  |||||  ||||||||| ||||||||||||||    
T  25055067 ttccaagaacaaaagatgaattgttatgatagctaactactctatttatagtctataacga-cttaaaacctaaacaatacatcactagaatgttccaca 25054969  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| || | |||| ||||||||||    
T  25054968 agaaaccaagggcttctaggtcagaa 25054943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 14659269 - 14659201
Alignment:
Q  147 aatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagct 215  Q
    ||||||||| ||||||||||||||||||| || | ||||||||||||||| || |||| | ||||||||    
T  14659269 aatacatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaaataggtagct 14659201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 36076270 - 36076224
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattc 46  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||    
T  36076270 aagaacataaaagtaaataacaataaaataaaggtgaacttttattc 36076224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 445 - 482
Target Start/End: Original strand, 42244888 - 42244925
Alignment:
Q  445 gcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    |||||||| |||||||||||||||||||||||||||||    
T  42244888 gcttcaaatccctttcttttgctccaagactcaatctt 42244925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 25055111 - 25055059
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    |||||| ||||||||||||||||||||||||| | |||||||||||| |||||    
T  25055111 aagaacgtaaaagtaaataacaataaaataaaggtgaacttttattccaagaa 25055059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 14137795 - 14137845
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||||||||||| || | || ||||||||| ||||||||||||    
T  14137795 ttccaagaacaaaagatgaatatttgtgattgctagctactctatttatag 14137845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 193
Target Start/End: Complemental strand, 40846737 - 40846691
Alignment:
Q  147 aatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    ||||||||| ||||||||||||||||||| || ||| ||||||||||    
T  40846737 aatacatcactagaatgttccacaagaaaccacgagtttttaggtca 40846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 3279824 - 3279751
Alignment:
Q  102 gctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||| ||||||||||||  || ||   ||||||  |||||| ||||||||| |||||||||||||||||||    
T  3279824 gctagctactctatttatagtttacaatcgacttaaaacctaagcaatacatcactagaatgttccacaagaaa 3279751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 482
Target Start/End: Complemental strand, 17209390 - 17209357
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatctt 482  Q
    |||| |||||||||||||||||||||||||||||    
T  17209390 caaatccctttcttttgctccaagactcaatctt 17209357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 449 - 481
Target Start/End: Complemental strand, 3279571 - 3279539
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatct 481  Q
    |||| ||||||||||||||||||||||||||||    
T  3279571 caaacccctttcttttgctccaagactcaatct 3279539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 7600748 - 7600712
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  7600748 tgctccaaatccctttcttttgctccaagactcaatc 7600712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 14815383 - 14815347
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  14815383 tgctccaaatccctttcttttgctccaagactcaatc 14815347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 17078079 - 17078043
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  17078079 tgctccaaatccctttcttttgctccaagactcaatc 17078043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 17696795 - 17696831
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  17696795 tgctccaaatccctttcttttgctccaagactcaatc 17696831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 18214672 - 18214708
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  18214672 tgctccaaatccctttcttttgctccaagactcaatc 18214708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 193
Target Start/End: Original strand, 19567152 - 19567188
Alignment:
Q  157 tagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  19567152 tagaatgttccacaagaaaccatgggcttttaggtca 19567188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22038940 - 22038888
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||||||||||| ||||||| |||||||||| | |||||||||||| |||||    
T  22038940 aagaacataaaagcaaataacgataaaataaaggtgaacttttattccaagaa 22038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 193
Target Start/End: Complemental strand, 27880158 - 27880118
Alignment:
Q  153 tcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    ||||||||||||||||||||||| || | ||||||||||||    
T  27880158 tcaatagaatgttccacaagaaaccacgggcttttaggtca 27880118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 4e-45; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 20860756 - 20860930
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag-aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||  |||||||||||||||| ||||||   |||||||||||||||||||||||||||    
T  20860756 aataaaataaagatgaacttttattcaaaggaaacaattgtcactattaatttccaagaacaagagatgattgtatatgtttgctagctgctctatttat 20860855  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    || ||| |||| |||||||||| ||||||||||||||| ||||||||||||||||| |||| || ||||||||||||    
T  20860856 agtctacaact-acttaagccccaagaaatacatcaatggaatgttccacaagaaaccatgggc-tttaggtcagaa 20860930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 2977568 - 2977671
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||| |||||||||  ||||||||||||||||||| ||| |||||    
T  2977568 gatcttcatatttttgtcttcaatcagctccaaatcatgctctagatccttccatcctttaatcatgctctaaaaccctttcttttgctctaaggctcaa 2977667  T
Q  479 tctt 482  Q
    ||||    
T  2977668 tctt 2977671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 43 - 180
Target Start/End: Original strand, 20899426 - 20899562
Alignment:
Q  43 attctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccct 142  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||   |||||||| ||||||  ||||||||||| ||| |||| ||||||||||     
T  20899426 attcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatgaatatgttttctagctattctatttatagtctacaact-acttaagcccc 20899524  T
Q  143 aagaaatacatcaatagaatgttccacaagaaagcatg 180  Q
    ||||||||||| |||||||||||| ||| |||| ||||    
T  20899525 aagaaatacataaatagaatgttctacaggaaaccatg 20899562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 379 - 479
Target Start/End: Original strand, 15347374 - 15347474
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||||  |||||| ||| ||||| ||||||||||||||||||||||||||||||    
T  15347374 gatctttatatttttgtcttcaatcagctccaaattatgctctagatccttccatcctttaattatgctccaaaaccctttcttttgctccaagactcaa 15347473  T
Q  479 t 479  Q
    |    
T  15347474 t 15347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 33 - 196
Target Start/End: Complemental strand, 23298958 - 23298797
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||||| |||||| |||| || ||  ||||||| |||||||||||||||    ||||||||||||||| |||||||||||| |||  || ||    
T  23298958 gagaacttttattcaaagaaataattctcgctattaatttcaaagaacaaaagatgattcaatatgtttgctagctactctatttatagtctacgac-aa 23298860  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||||||| |||||||||||||||| |||||||||||| ||| |||| || ||||||||||||    
T  23298859 cttaagccccaagaaatacatcaataaaatgttccacaaaaaaccatgggc-tttaggtcagaa 23298797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 16384972 - 16385114
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||  ||| | | ||| | |||||||||||||||| |||| | | |    
T  16384972 gagaacttttattcaaagaaacaattgtcacttataatttcaaagaacaaaagacgattatacaaggttgatggctgctctatttatagtctaacattga 16385071  T
Q  133 cttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||||||||||| |||||| |||| |||| |||| |||||||||    
T  16385072 cttaagccctacgaaataaatcactagagtgttacacaagaaa 16385114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 26194325 - 26194180
Alignment:
Q  22 aataaaataaa-gagaacttttattctaaga-aacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    ||||||||||| |||| ||||||||| |||| |||||||||||||  |||||||||||||||||||||||    ||||||||||||| ||||||||||||    
T  26194325 aataaaataaatgagagcttttattcaaagataacaattgtcactattaatttccaagaacaaaagatgattcaatatgtttgctagttgctctatttat 26194226  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttc 166  Q
    || ||| |||| ||||||| || ||||||||||| ||||||||||||    
T  26194225 agtctataact-acttaagtccgaagaaatacattaatagaatgttc 26194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 26 - 194
Target Start/End: Original strand, 13799464 - 13799632
Alignment:
Q  26 aaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcct 124  Q
    ||||||||| |||||||||||| || ||||||||||||||||| |||||  ||||||||||||||     | ||| |||||||| ||||||||||||  |    
T  13799464 aaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtgtctgctagctactctatttatagttt 13799563  T
Q  125 aaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcag 194  Q
    | || | ||||||| ||||||||||| |||| ||||||||||||||||||| |||| |||||||||||||    
T  13799564 acaa-tgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcag 13799632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 20493233 - 20493130
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||||||||||||||||||| | |||||||||||||  |  |||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||    
T  20493233 gatcttcatatttttgtcttcagtaagctccaaatcatattttagatccttttatcctttaattatgctccaaaaccatttcttttgctccaagactcaa 20493134  T
Q  479 tctt 482  Q
    ||||    
T  20493133 tctt 20493130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 369 - 479
Target Start/End: Original strand, 20899646 - 20899756
Alignment:
Q  369 ttttgtgcaagatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctc 468  Q
    |||||| || |||||||||||||||||| |||||||||||||||||||  |  |||||||||||||||| |||| |||| |||| ||||||||||||||     
T  20899646 ttttgtacatgatcttcatatttttgtcatcaatcagctccaaatcatattttagatccttttatcctttaatcttgctccaaacccctttcttttgcta 20899745  T
Q  469 caagactcaat 479  Q
    |||||||||||    
T  20899746 caagactcaat 20899756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 17716831 - 17716658
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| ||||   |||||||||||| ||    |||| | ||||||| ||||||||||||    
T  17716831 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagataaattgttatgatagctagctactctatttatag 17716732  T
Q  122 cctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     ||| ||| |||||||  |||||| ||||||||| ||||||| ||||||||||  || | |||||||||||||||    
T  17716731 tctataac-aacttaaaacctaagcaatacatcactagaatggtccacaagaagccaagggcttttaggtcagaa 17716658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 48256377 - 48256218
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    |||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||    |||  | ||||||| |||||||||||| ||| ||| | ||    
T  48256377 gaacttttattcaaagaaacaattgttacttattatt-ccaagaacaaaagatgaattgttataatagctagctactctatttatagtctataacga-ct 48256280  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||  |||||| ||||||||| |||||||||||| |||||| || | |||||||||||||||    
T  48256279 taaaacctaagtaatacatcactagaatgttccataagaaaccaagggcttttaggtcagaa 48256218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 2386318 - 2386202
Alignment:
Q  6 cataaaagtaaataacaataaaataaagagaa-cttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  || ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | |||    
T  2386318 cataaaagtaaataacaagaaagtaaaggtaaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggct 2386219  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  2386218 agctactctatttatag 2386202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 21918581 - 21918481
Alignment:
Q  379 gatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaa 478  Q
    |||||||||||||||| | | ||||||||||||||||||||| ||||||||  || | | ||||||||| |||||||||||||| |||||||||||||||    
T  21918581 gatcttcatatttttggcctgaatcagctccaaatcatgctctagatccttccattccttaatcatgctccaaaaccctttcttctgctccaagactcaa 21918482  T
Q  479 t 479  Q
    |    
T  21918481 t 21918481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 21792342 - 21792458
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | |  | |||    
T  21792342 cataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtcatggct 21792441  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  21792442 agctactctatttatag 21792458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 25405084 - 25405184
Alignment:
Q  15 aaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctct 113  Q
    ||||||||| |||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||||||  ||| | ||||| | ||||||||    
T  25405084 aaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatgactatacaagtttgatggctgctct 25405183  T
Q  114 a 114  Q
    |    
T  25405184 a 25405184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 21784214 - 21784327
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| ||||   ||||||||||||||| || | || | |    
T  21784214 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagatgaatatttgtgatgg 21784313  T
Q  103 ctagctgctctatt 116  Q
    |||||| |||||||    
T  21784314 ctagctactctatt 21784327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 370 - 482
Target Start/End: Complemental strand, 24679795 - 24679683
Alignment:
Q  370 tttgtgcaagatcttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttt-tatccttaaatcatgcttcaaaaccctttcttttgctc 468  Q
    ||||| || |||||||||| |||||   ||||||||||| ||||||||||| ||||||||| | | |||||  |||||| ||||||||||||||||||||    
T  24679795 tttgtacaggatcttcatacttttggtgtcaatcagctctaaatcatgctctagatcctttcttttcttaac-catgctccaaaaccctttcttttgctc 24679697  T
Q  469 caagactcaatctt 482  Q
    ||||||||||||||    
T  24679696 caagactcaatctt 24679683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 28206355 - 28206471
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  ||| |||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |||    
T  28206355 cataaaagtaaatgacaagaaagtaaaggtgaatttttattcaaagaaacaattgtcacttattatttctgagaacaaaagatgaatatttgtgatggct 28206454  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  28206455 agctactctatttatag 28206471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 41802350 - 41802251
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||  |  ||| ||||||||| ||||||||||||    
T  41802350 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcatagaacaaaagatgaatgttaatgattgctagctactctatttatag 41802251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 15347018 - 15347136
Alignment:
Q  50 gaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaat 149  Q
    |||| |||||||||  | |||| |||||||||||||||||  | |||||| || |  |||||||||||||||||||||||| ||||||| |||||||| |    
T  15347018 gaaataattgtcacaaagaattcccaagaacaaaagatgatgagatatgtctggtgactgctctatttatagcctaaaactgacttaagtcctaagaagt 15347117  T
Q  150 acatcaatagaatgttcca 168  Q
    | |||| || |||||||||    
T  15347118 aaatcactataatgttcca 15347136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 17986636 - 17986584
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagat 87  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  17986636 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagat 17986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 52235908 - 52236033
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaaga-aatacatcaatagaatgttccac 169  Q
    ||||||||||||||||||||    |||| | ||||||| |||||||||||| ||| ||| | |||||  ||||||  ||||||||| |||||||||||||    
T  52235908 ttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataacga-cttaaaacctaagctaatacatcactagaatgttccac 52236006  T
Q  170 aagaaagcatgagcttttaggtcagaa 196  Q
    |||||| || |||||||||| ||||||    
T  52236007 aagaaaccaagagcttttagatcagaa 52236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 8648929 - 8648876
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||| |||||||||||||||||||| |||| |||||||||||||||    
T  8648929 gaacttttattcaaagaaacaattgtcacttattattttcaagaacaaaagatg 8648876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 39286643 - 39286696
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||||    
T  39286643 gaacttttattcaaagaaacaattgtcacttattttttccaagaacaaaagatg 39286696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 30819075 - 30819122
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaa 82  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||    
T  30819075 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaa 30819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 16148469 - 16148591
Alignment:
Q  34 agaacttttattctaagaaa-caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaa 132  Q
    |||| |||||||| |||||| |||||||||||  ||| |||  ||||||||||||||  ||| | | ||| | |||||||||||||||| |||| | | |    
T  16148469 agaaattttattcaaagaaaacaattgtcactattaaattcagagaacaaaagatgattatacaagcttgatggctgctctatttatagtctaacattga 16148568  T
Q  133 cttaagccctaagaaatacatca 155  Q
    |||||||||||||||||| ||||    
T  16148569 cttaagccctaagaaataaatca 16148591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 16431598 - 16431474
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    |||||||||||||| ||||||   | || | ||||||| |||||||||||| ||| | | | |||||  |||||| ||||||||| ||||||||||||||    
T  16431598 ttccaagaacaaaatatgaaatgttgtgatagctagctactctatttatagtctatatcga-cttaaaacctaagcaatacatcactagaatgttccaca 16431500  T
Q  171 agaaagcatgagcttttaggtcagaa 196  Q
    ||||| ||   |||||||||||||||    
T  16431499 agaaaccaatggcttttaggtcagaa 16431474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 193
Target Start/End: Complemental strand, 20412315 - 20412167
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag------cctaaaactaacttaagccctaa 144  Q
    ||||||||||||||||| ||||||||||||||||||||||    | || | ||||||| ||||||||||||      | | | | | ||||||  |||||    
T  20412315 aaacaattgtcacttattatttccaagaacaaaagatgaattgttgtgatagctagctactctatttatagtttagactttagaatgacttaaaacctaa 20412216  T
Q  145 gaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    | ||||||||| ||||||||||||||||||| |||  || |||||||||    
T  20412215 gcaatacatcactagaatgttccacaagaaaccattggcatttaggtca 20412167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 51 - 196
Target Start/End: Original strand, 28763914 - 28764058
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaata 150  Q
    ||||||||||||||  | | || ||||||||||||||| |    |||| | |||| || ||||||||||||  || ||| | |||||  |||||| ||||    
T  28763914 aaacaattgtcactattgaatttcaagaacaaaagatggattgttatgatagctaactactctatttatagtatataacga-cttaaaacctaagcaata 28764012  T
Q  151 catcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    ||||| || |||||||||||||||| || | |||||||||||||||    
T  28764013 catcactataatgttccacaagaaaccacgggcttttaggtcagaa 28764058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 20493569 - 20493490
Alignment:
Q  9 aaaagtaaataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||| || | || || |||||||||||||| | |||| || ||||||||||||||||||| ||||||| ||||    
T  20493569 aaaagtaaataagaaaataaaaaggagaacttttattcaatgaaa-aagtgtcacttataatttccaaaaacaaaatatga 20493490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Original strand, 26134535 - 26134602
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| || ||||||||||||||||| |||||  |||||||||||||||    
T  26134535 ataaaataaaggtgaacttttattcaaa-aaacaattgtcacttattatttcagagaacaaaagatgaa 26134602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 28207971 - 28207903
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| || ||||||| ||||||||| |||| ||| |||||||||||||    
T  28207971 ataaaataaaggtgaacttttattcaaataaacaatggtcacttattatttgcaaaaacaaaagatgaa 28207903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 44538320 - 44538252
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||  ||||   |||||||||||||||    
T  44538320 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttaatatttttgagaacaaaagatgaa 44538252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 52235869 - 52235916
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaa 52  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||    
T  52235869 cataaaagtaaataacaataaaataaagatgtacttttattccaagaa 52235916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 15346897 - 15346935
Alignment:
Q  50 gaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||||| ||||||| ||||||||||||||||    
T  15346897 gaaacaattgtcacatataattcccaagaacaaaagatg 15346935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 13799795 - 13799828
Alignment:
Q  449 caaaaccctttcttttgctccaagactcaatctt 482  Q
    |||| |||||||||||||||||||||||||||||    
T  13799795 caaatccctttcttttgctccaagactcaatctt 13799828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 52755395 - 52755464
Alignment:
Q  53 acaattgtcacttata-atttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||||||  | ||||||||||||||||||||  | |||| | ||||||| ||||||||||||    
T  52755395 acaattgtcacttattgaattccaagaacaaaagatgaatgtttatgatagctagctactctatttatag 52755464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 19209719 - 19209683
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  19209719 tgctccaaatccctttcttttgctccaagactcaatc 19209683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 1502 - 1328
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgt 99  Q
    |||||||| |||||||||||||| |||||| ||| |||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    |||| |    
T  1502 aagaacatgaaagtaaataacaagaaaatagagatgaacttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgattcaatatat 1403  T
Q  100 ttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    |||||||||||| |||||||| |||| |||| ||||||||| | ||||||| ||||||||||||||||||||||||    
T  1402 ttgctagctgctttatttataacctataact-acttaagccttgagaaatatatcaatagaatgttccacaagaaa 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 38578 - 38447
Alignment:
Q  16 aataacaataaaataaagagaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctat 115  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||| || || | |||||||||     
T  38578 aataacaagaaaataaagagaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgaatagataagtctgatggctgctctac 38479  T
Q  116 ttatagcctaaaactaacttaagccctaagaa 147  Q
    | |||| |||| | | ||||||||||||||||    
T  38478 taatagtctaatattgacttaagccctaagaa 38447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 382 - 482
Target Start/End: Complemental strand, 38156 - 38056
Alignment:
Q  382 cttcatatttttgtcttcaatcagctccaaatcatgctcaagatccttttatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatct 481  Q
    ||||||||||||| |||||||||||||||||||||  |  |||||||||||||||| |||||| || ||||||| ||||||||||||||||| |||||||    
T  38156 cttcatatttttgacttcaatcagctccaaatcatattttagatccttttatcctttaatcatactccaaaaccttttcttttgctccaagattcaatct 38057  T
Q  482 t 482  Q
    |    
T  38056 t 38056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 6e-35; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 82629 - 82771
Alignment:
Q  33 gagaacttttattctaagaaacaattgtcacttat-aatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaacta 131  Q
    |||||| ||||||| |||||||||| ||||||||| ||||||||| ||||||||||||    ||||||||||||| | |||||||||||| ||| |||||    
T  82629 gagaacctttattcaaagaaacaatggtcacttattaatttccaaaaacaaaagatgattgaatatgtttgctagatactctatttatagtctataacta 82728  T
Q  132 acttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
     ||||||||| |||||||||||||||||||||||||||||||||    
T  82729 -cttaagccccaagaaatacatcaatagaatgttccacaagaaa 82771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 425020 - 425136
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||   |||||||||||||| || | || | |||    
T  425020 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagggaacaaaagatgaatatttgtgatggct 425119  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  425120 agctactctatttatag 425136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 180
Target Start/End: Complemental strand, 520798 - 520670
Alignment:
Q  51 aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaata 150  Q
    ||||||||||||||  | | |||||| |||||||||||||    | || ||||||||| ||||||||||||  || ||| ||||||||||| ||||||||    
T  520798 aaacaattgtcactattgaattccaataacaaaagatgaattgttgtgattgctagctactctatttatagtttataac-aacttaagccccaagaaata 520700  T
Q  151 catcaatagaatgttccacaagaaagcatg 180  Q
     |||| ||||||||||||||||||| ||||    
T  520699 tatcactagaatgttccacaagaaaccatg 520670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1323 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 1897 - 2015
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | |    
T  1897 aacataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatgg 1996  T
Q  103 ctagctgctctatttatag 121  Q
    |||||| ||||||||||||    
T  1997 ctagctactctatttatag 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 2605 - 2489
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | |||    
T  2605 cataaaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggct 2506  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  2505 agctactctatttatag 2489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 108
Target Start/End: Complemental strand, 14164 - 14089
Alignment:
Q  35 gaacttttattctaag--aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagct 108  Q
    |||||||||||| |||  ||||||||||||||  ||| |||||||||||| ||||||    |||||||||||||||    
T  14164 gaacttttattcaaaggtaaacaattgtcactattaaattccaagaacaagagatgattgaatatgtttgctagct 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 35 - 196
Target Start/End: Complemental strand, 3579 - 3418
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaact 134  Q
    ||||| |||||| |||| ||||||||||||||| ||||||||||| ||||||||||  |   || | ||||||| |||||||||||| |||| |   |||    
T  3579 gaactattattcaaagagacaattgtcacttattatttccaagaagaaaagatgaatgttactgatagctagctactctatttatagtctaatatcgact 3480  T
Q  135 taagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||  |||||| ||||||||| |||||||||||| |||||| || | |||||||||||||||    
T  3479 taaaacctaagcaatacatcactagaatgttccaaaagaaaccaagcgcttttaggtcagaa 3418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 22 - 242
Target Start/End: Original strand, 8874 - 9085
Alignment:
Q  22 aataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttata 120  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||| |||||  |||||||  | |        ||| | ||||||| |||||||||||    
T  8874 aataaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcatagaacaattgtt--------atgatagctagctactctatttata 8965  T
Q  121 gcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacactagaaaggtagctagatc 220  Q
    | ||| ||| | |||||  |||||| ||||||||| ||||||||||||||||||| || ||| ||||||||||||| || |||| | |||||||| | ||    
T  8966 gtctataacga-cttaaaacctaagcaatacatcactagaatgttccacaagaaaccaagagtttttaggtcagaaataaacta-ataggtagcttgttc 9063  T
Q  221 agggagcaaaagcagcaaaagg 242  Q
     |  ||||||||||||||||||    
T  9064 ggaaagcaaaagcagcaaaagg 9085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 19527 - 19356
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||||||||||||| ||| |||||  |||||||| ||| ||||| |||||||||||||| |||||| ||||||||||||||| || | || | |||    
T  19527 cataaaagtaaataacaagaaagtaaaggtgaacttttgttcaaagaaccaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggct 19428  T
Q  105 agctgctctatttatagcctaaaactaacttaagccctaagaaa-tacatcaatagaatgttccacaagaaa 175  Q
    |||| ||||||||||||| || |    ||||||   |||||||| ||||| | |||||||||||||||||||    
T  19427 agctactctatttatagcatacattcgacttaaaatctaagaaattacattactagaatgttccacaagaaa 19356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 55; Significance: 2e-22; HSPs: 4)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 23331 - 23245
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||| || | || | ||||||| ||||||||||||    
T  23331 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatatttgtgatggctagctactctatttatag 23245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 249 - 198
Alignment:
Q  39 ttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  249 ttttattcaaagaaacaattgtcacttaatatttccaagaacaaaagatgaa 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 100449 - 100382
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatga 89  Q
    |||||||||||  |||||||||||| ||||||||||| |||||||| |||||  ||||||||||||||    
T  100449 ataaaataaaggtgaacttttattcaaagaaacaattatcacttattatttcagagaacaaaagatga 100382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 77905 - 77850
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    ||||||||||   |||||||||| ||||||||| |||||||| |||||||||||||    
T  77905 gaacttttatataaagaaacaatggtcacttattatttccaataacaaaagatgaa 77850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 1943 - 2054
Alignment:
Q  11 aagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctg 109  Q
    ||||||||||||  ||| |||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | |||||||     
T  1943 aagtaaataacatgaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagcta 2042  T
Q  110 ctctatttatag 121  Q
    ||||||||||||    
T  2043 ctctatttatag 2054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 6498 - 6399
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | ||||||| ||||||||||||    
T  6498 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 6399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 11112 - 11013
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | ||||||| ||||||||||||    
T  11112 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 11013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 9107 - 9008
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || | || | ||||||| ||||||||||||    
T  9107 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatgaatatttgtgatggctagctactctatttatag 9008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 121
Target Start/End: Original strand, 18756 - 18874
Alignment:
Q  4 aacataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||| ||||||||||| ||| |||||  |||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||| || | || | |    
T  18756 aacataaacgtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatgaatatttgtgatgg 18855  T
Q  103 ctagctgctctatttatag 121  Q
    ||| || ||||||||||||    
T  18856 ctaactactctatttatag 18874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 26839 - 26956
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||| |||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | |||    
T  26839 cataaatgtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggct 26938  T
Q  105 agctgctctatttatagc 122  Q
    |||| |||||||||||||    
T  26939 agctactctatttatagc 26956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 21692 - 21777
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||| |||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  21692 cataaatgtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 21777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 13815 - 13702
Alignment:
Q  9 aaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagc 107  Q
    ||||||||||||||| ||| |||||  |||||||||||| || ||||||||||||||| | |||||| ||||||||||||||| || | || | ||||||    
T  13815 aaaagtaaataacaagaaagtaaagttgaacttttattcaaataaacaattgtcactttttatttccgagaacaaaagatgaatatttgtgatggctagc 13716  T
Q  108 tgctctatttatag 121  Q
    | ||||||||||||    
T  13715 tactctatttatag 13702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 48491 - 48375
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||||||| |||||   |||||||||||||| || | || | |||    
T  48491 cataaaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagggaacaaaagatgaatatttgtgatggct 48392  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  48391 agctactctatttatag 48375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 9100 - 9199
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| || | || | ||||||| ||||||||||||    
T  9100 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatag 9199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 31753 - 31557
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaaga--gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatg 98  Q
    ||||||||||| ||||||||||| ||||||||||  |||||||||||  || | |||||||| |||  | | ||||||||||||||||| ||    ||||    
T  31753 aagaacataaa-gtaaataacaagaaaataaagaaagaacttttattaaaaaagacaattgttactacttaattccaagaacaaaagattaattgttatg 31655  T
Q  99 tttgctagctgctctatttatagcct-aaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
     | ||||||| |||||||||||| || ||||| | ||||| || |||| | ||||||| ||||||||||||||||||| ||   |||||||||||||||    
T  31654 atagctagctactctatttatagtctcaaaacgaccttaaacc-taagcactacatcactagaatgttccacaagaaaccacaggcttttaggtcagaa 31557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 163925 - 164024
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||| |||| || | | ||||| ||||||||||||    
T  163925 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcacagaacaaaagatgaatatatgtgatggttagctactctatttatag 164024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 172832 - 172645
Alignment:
Q  4 aacataaaagtaaataacaataaaataaagagaacttttattctaagaaa-caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttg 102  Q
    |||||||||  ||||||||| ||| ||||||  |||||||||   ||||| |||||||||||  | | ||||||||||||||||||||    | || |||    
T  172832 aacataaaataaaataacaagaaagtaaaga--acttttattaagagaaaacaattgtcactattgaattccaagaacaaaagatgaattgttgtgattg 172735  T
Q  103 ctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtca 193  Q
    |||||| ||||||||||||  || || | |||||||||| |||||||| |||| |||||||||||| |||||| || | ||||||||||||    
T  172734 ctagctactctatttatagtttacaa-tgacttaagccccaagaaatatatcactagaatgttccagaagaaaccacgggcttttaggtca 172645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 27466 - 27350
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| | || ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||  || | || | |||    
T  27466 cataaaagtaaatgaaaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgattatttgtgatggct 27367  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  27366 agctactctatttatag 27350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 39462 - 39346
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| | || ||| |||||  |||||||||||| |||||||||||||||||||| |||||  ||||||||||||||  || | || | |||    
T  39462 cataaaagtaaatgaaaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgattatttgtgatggct 39363  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  39362 agctactctatttatag 39346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 9819 - 9918
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||| |||||||||||| |||||||||||||||||||| |||||  ||||||||||||| | || | || | ||||||| || |||||||||    
T  9819 ataaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatggatatttgtgatggctagctactttatttatag 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 17655 - 17754
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||| ||||| ||||||||| || | || | |||| || ||||||||||||    
T  17655 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaaccaaagatgaatatttgtgatggctatctactctatttatag 17754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 22 - 175
Target Start/End: Original strand, 22746 - 22900
Alignment:
Q  22 aataaaataaaga-gaacttttattctaag-aaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    |||||| |||||| |||||||||||| ||| ||||||||||||||   ||||||||||||||| ||||||    ||| |||||| |||| ||||||||||    
T  22746 aataaactaaagatgaacttttattcaaaggaaacaattgtcactataaatttccaagaacaagagatgattgaatacgtttgcaagctactctatttat 22845  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaa 175  Q
    ||  || |||| ||| || ||| ||||| ||||| |||||||| ||||||||||||    
T  22846 agtttacaact-actaaaaccccaagaagtacattaatagaatattccacaagaaa 22900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Original strand, 34073 - 34109
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  34073 tgctccaaatccctttcttttgctccaagactcaatc 34109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 18954 - 19052
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttata 120  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  ||||| ||||||||| || | || | ||||||| |||||||||||    
T  18954 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaactaaagatgaatatttttgatggctagctactctatttata 19052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 5)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 482
Target Start/End: Original strand, 32327 - 32419
Alignment:
Q  389 tttttgtcttcaatcagctccaaatcatgctcaagatccttt-tatccttaaatcatgcttcaaaaccctttcttttgctccaagactcaatctt 482  Q
    ||||||||| |||||| ||||||||||||||| ||||||||  | ||| |||  |||||| ||||||||||||||||||||||||||||||||||    
T  32327 tttttgtct-caatcaactccaaatcatgctctagatccttcctttccataac-catgctccaaaaccctttcttttgctccaagactcaatctt 32419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 31224 - 31267
Alignment:
Q  106 gctgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  31224 gctgctctatttatagcctaaaagctaacttaagccctaagaaa 31267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 33374 - 33415
Alignment:
Q  108 tgctctatttatagcctaaaa-ctaacttaagccctaagaaa 148  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  33374 tgctctatttatagcctaaaagctaacttaagccctaagaaa 33415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 429
Target Start/End: Original strand, 33696 - 33745
Alignment:
Q  380 atcttcatatttttgtcttcaatcagctccaaatcatgctcaagatcctt 429  Q
    |||||||||||||||   ||||||||||||||||||||||| ||||||||    
T  33696 atcttcatatttttggtctcaatcagctccaaatcatgctctagatcctt 33745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 31948 - 32038
Alignment:
Q  57 ttgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagccta-aaactaacttaagccctaagaaa 148  Q
    |||||||| | |||| | ||||||||| |||||| | |||||| || | |||||||||||||||||||| || |||||||||||| |||||||    
T  31948 ttgtcactgaaaattcctaagaacaaa-gatgaata-atatgtctggtggctgctctatttatagcctataagctaacttaagccttaagaaa 32038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 9236 - 9285
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaa 84  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  9236 gaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaa 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 9286 - 9342
Alignment:
Q  140 cctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||| ||||||||| ||||||||||||||||||| || | |||||||||||||||    
T  9286 cctaagcaatacatcactagaatgttccacaagaaaccacgggcttttaggtcagaa 9342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 8879 - 8932
Alignment:
Q  35 gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  8879 gaacttttattcaaagaaacaattgtcacttattatttccacgaacaaaagatg 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 48870 - 48802
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaa 90  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||||||||    
T  48870 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaa 48802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 6 - 121
Target Start/End: Complemental strand, 61941 - 61825
Alignment:
Q  6 cataaaagtaaataacaataaaataaagag-aacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    ||||||||||||| |||| ||| |||||   || |||||||| |||||||||||||||||||| |||||  |||| |||||||||| || | || | |||    
T  61941 cataaaagtaaatgacaagaaagtaaaggtcaatttttattcaaagaaacaattgtcacttattatttcagagaagaaaagatgaatatttgtgatggct 61842  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  61841 agctactctatttatag 61825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 21729 - 21569
Alignment:
Q  22 aataaaataaaga-gaacttttattctaagaaa-caattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttat 119  Q
    ||||||||||||| |||||||||||  |||||| |||||||||||  ||| ||| |||||||||||||||   || | | | | | ||||||| ||||||    
T  21729 aataaaataaagatgaacttttattaaaagaaaacaattgtcactattaaattcaaagaacaaaagatgattttacaagctagatggctgctcaatttat 21630  T
Q  120 agcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatg 180  Q
    || |||| | | |||| |||||||||||||| |||| || | |||| ||||||||| ||||    
T  21629 agtctaacattgacttgagccctaagaaataaatcactaaagtgttgcacaagaaaccatg 21569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 44405 - 44453
Alignment:
Q  141 ctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttag 189  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||    
T  44405 ctaagcaatacatcactagaatgttccacaagaaaccatgagcttttag 44453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44292 - 44344
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||| |||||    
T  44292 aagaacataaaagtaaacaacaataaaataaaggtgaacttttattccaagaa 44344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 37944 - 38060
Alignment:
Q  6 cataaaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgct 104  Q
    |||||||| |||| |||| ||| |||||  |||||||| ||  |||||||||||||||||||| ||| |  ||||||||||||||| || | || | |||    
T  37944 cataaaagaaaatgacaagaaagtaaaggtgaacttttgtttaaagaaacaattgtcacttattattacagagaacaaaagatgaatatttgtgatggct 38043  T
Q  105 agctgctctatttatag 121  Q
    |||| ||||||||||||    
T  38044 agctactctatttatag 38060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 21210 - 21041
Alignment:
Q  71 ttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccaca 170  Q
    ||||||||||||||||||||    |||| | ||||||| ||| ||||||||  || ||| | |||||  |||||| ||||||||| ||||||||||||||    
T  21210 ttccaagaacaaaagatgaattgttatgatagctagctactcaatttatagtgtataacga-cttaaaacctaagcaatacatcactagaatgttccaca 21112  T
Q  171 agaaagcatgagcttttaggtcagaattacactagaaaggtagctagatcagggagcaaaagcagcaaaaggg 243  Q
    ||||| || | |||||||||| |||| || |||| | |||||||| |  |||  ||||||| |||||||||||    
T  21111 agaaaccaag-gcttttaggttagaaataaacta-ataggtagcttgtccagaaagcaaaatcagcaaaaggg 21041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21254 - 21222
Alignment:
Q  1 aagaacataaaagtaaataacaataaaataaag 33  Q
    ||||| |||||||||||||||||||||||||||    
T  21254 aagaagataaaagtaaataacaataaaataaag 21222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Complemental strand, 34034 - 33972
Alignment:
Q  23 ataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaa 84  Q
    |||||||||||  |||||||||||| |||||||||||||||||||| |||||  |||||||||    
T  34034 ataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaa 33972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 22419 - 22468
Alignment:
Q  4 aacataaaagtaaataacaataaaataaa-gagaacttttattctaagaa 52  Q
    ||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  22419 aacataaaagtaaataacaataaaataaaggtgaacttttattccaagaa 22468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 103 - 204
Target Start/End: Complemental strand, 21318 - 21218
Alignment:
Q  103 ctagctgctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaattacac 202  Q
    |||||| ||||||||||||  || || | ||||||  |||||| ||||||||| ||||||||||||||||||| ||   | ||||||||||||| |||||    
T  21318 ctagctactctatttatagtgtacaa-tgacttaaaacctaagcaatacatcactagaatgttccacaagaaaccacaggattttaggtcagaaatacac 21220  T
Q  203 ta 204  Q
    ||    
T  21219 ta 21218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 49953 - 49904
Alignment:
Q  39 ttttattctaagaaacaattgtcacttataatttccaagaacaaaagatg 88  Q
    ||||| || ||| |||||||||||||||| ||||||||||||||||||||    
T  49953 ttttactcaaaggaacaattgtcacttattatttccaagaacaaaagatg 49904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0760 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0760
Description:

Target: scaffold0760; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 480
Target Start/End: Original strand, 6506 - 6541
Alignment:
Q  445 gcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||||||| |||||||||||||||||||||||||||    
T  6506 gcttcaaatccctttcttttgctccaagactcaatc 6541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 13890 - 13848
Alignment:
Q  106 gctgctctatttatagcctaaaactaacttaagccctaagaaa 148  Q
    |||||||||||||||||||||  ||||||||||||| ||||||    
T  13890 gctgctctatttatagcctaatgctaacttaagcccaaagaaa 13848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 19714 - 19645
Alignment:
Q  53 acaattgtcacttata-atttccaagaacaaaagatgaaaatatatgtttgctagctgctctatttatag 121  Q
    |||||||||||||||  | ||||||||| |||||||||| || |||| | ||||||| ||||||||||||    
T  19714 acaattgtcacttatcgaattccaagaataaaagatgaatatttatgatggctagctactctatttatag 19645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1225 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 2300 - 2236
Alignment:
Q  132 acttaagccctaagaaatacatcaatagaatgttccacaagaaagcatgagcttttaggtcagaa 196  Q
    |||||||||||||| ||||||||| ||||||||| |||| |||| |||  | |||||||| ||||    
T  2300 acttaagccctaagcaatacatcactagaatgtttcacaggaaaccatcgggttttaggttagaa 2236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 1431 - 1395
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  1431 tgctccaaatccctttcttttgctccaagactcaatc 1395  T

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Target: scaffold0404; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 3702 - 3666
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  3702 tgctccaaatccctttcttttgctccaagactcaatc 3666  T

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Target: scaffold0112 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 5032 - 4996
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  5032 tgctccaaatccctttcttttgctccaagactcaatc 4996  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 480
Target Start/End: Original strand, 246148 - 246184
Alignment:
Q  445 gcttcaaaaccc-tttcttttgctccaagactcaatc 480  Q
    |||||||||||| ||||||||||||||||||||||||    
T  246148 gcttcaaaacccctttcttttgctccaagactcaatc 246184  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 253768 - 253732
Alignment:
Q  444 tgcttcaaaaccctttcttttgctccaagactcaatc 480  Q
    |||| |||| |||||||||||||||||||||||||||    
T  253768 tgctccaaatccctttcttttgctccaagactcaatc 253732  T

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