View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21156_low_6 (Length: 256)
Name: NF21156_low_6
Description: NF21156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21156_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 9663749 - 9663985
Alignment:
| Q |
1 |
aaatatcacaacctagatgaaaatttgaatcttgaagaactaattagtaactatctttaagatggttcactagaagctaaatttgctaaagatggagcaa |
100 |
Q |
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| T |
9663749 |
aaatatcacaacctagatgaaaatttgaatcttgtagaactaattagtaactatctttaagatggttcactagaagctacatttgctaaagatggagcaa |
9663848 |
T |
|
| Q |
101 |
tacattgtcttagtgcaccaacattttaaatagtctatactaaattgacactttgattcttatttgtgattctttgttgaaatttgaagacttaacttat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
9663849 |
tacattgtcttagtgcaccaacattttaaatagtctatactaaattgacaatttgattcttatttgtgattctttgttgaaatttgaagactcaacttat |
9663948 |
T |
|
| Q |
201 |
ttgctccataaaacccctaacaacaagaggtgtcaat |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
9663949 |
ttgctccataaaacccctaacaacaagaggtgtcaat |
9663985 |
T |
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