View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21157_low_6 (Length: 382)
Name: NF21157_low_6
Description: NF21157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21157_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 95 - 372
Target Start/End: Complemental strand, 41456829 - 41456554
Alignment:
| Q |
95 |
ctaaactgtttagtgttttttcacaaatgaacagtagaaattctataataaagttcctattnnnnnnnntaacgaagatagctaagctagcaagtcatgc |
194 |
Q |
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| T |
41456829 |
ctaaactgtttagtgttttt-cacaaatgaacagtataaattctctaataaagttcctattaaaaaaa-taacgaagatagctaagctagcaagtcatgc |
41456732 |
T |
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| Q |
195 |
atcaaatatatggaaatcatagcatattaaatttagaaaggaaaaggaaaggattaattgttatcataccacagaaggagaatgccaaaataatacaaag |
294 |
Q |
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| T |
41456731 |
atcaaatatatggaaatcatagcatattaaatttagaaaggaaaaggaaaggattaattgttatcataccacagaaggagaatgccaaaataatgcaaag |
41456632 |
T |
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| Q |
295 |
agcaaattgggtattcattatgggattcatatagctggttttcttaatttgatgaatggttgtgagtgaggtattaat |
372 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41456631 |
agcaaattgggtattcattataggattcatatagctggttttcttaatttgatgaatggttgtgagtgaggtattaat |
41456554 |
T |
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