View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21158_low_8 (Length: 319)
Name: NF21158_low_8
Description: NF21158
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21158_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 314
Target Start/End: Complemental strand, 137290 - 136977
Alignment:
| Q |
1 |
ttcatcccgttcctccaatttatgtaataaatttctcccgtctgagtaaccaattaattgttcacactcaattactaattatcagattcaaagttcaaac |
100 |
Q |
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| T |
137290 |
ttcatcccgttcctccaatttatgtaataaatttctcccgtctgagtaaccaattaattgttcacactcaattactaattatcagattcaaagttcaaac |
137191 |
T |
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| Q |
101 |
taaaatatggtgaaacaaataaaactaaaacaaggccagaacacaacacacactttatatattttatattgacattcacggatcagtttaatttgcaaat |
200 |
Q |
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| T |
137190 |
taaaatatggtgaaacaaataaaactaaaacaaggccagaacacaacacacactttatatattttatattgacattcacggatcagtttaatttgcaaat |
137091 |
T |
|
| Q |
201 |
tcaacaacagaaaccaagaaaagttgcattgcaccttaccctataaaggaaaagttaaatgaaaagaagtgagaatatttgagaatgtaaaaagcaaaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
137090 |
tcaacaacagaaaccaagaaaagttgcattgcaccttaccctataaaggaaaagttaaatgaaaagaagtgagaatatttgagaatgtaaaaagcaaaac |
136991 |
T |
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| Q |
301 |
accactatactact |
314 |
Q |
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|||||||||||||| |
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| T |
136990 |
accactatactact |
136977 |
T |
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