View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2115_low_7 (Length: 275)
Name: NF2115_low_7
Description: NF2115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2115_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 30211938 - 30212194
Alignment:
| Q |
1 |
cttccaaggaacttcctctccaagtatcttatttgaatctgaatatttggcgttgaagaatcagtaattgcttgccttaaacgacttcttgaatactcta |
100 |
Q |
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| T |
30211938 |
cttccaaggaacttcctctccaagtttcttatttgcatctgaatatttggcgttgaagaatcagtaattacttgccttaaacgacttcttgaacactctt |
30212037 |
T |
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| Q |
101 |
tatatgacagttttcagaagtagtattattttgaacttgtttcgagtgattctagtaattattctaaagaatctaaccgtatatgattcacatttcaaat |
200 |
Q |
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| T |
30212038 |
tatatgacagttttcagaagtagtattattttgaacttgtttcgagtgattctagtaattattctaaaggatctaactgtatatgattcaaatttcaaat |
30212137 |
T |
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| Q |
201 |
ataacaataatagtagtaataaaaaatcaattcatatttagttaagtaagtcagcct |
257 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
30212138 |
ataacaataatagtagtaataaaaaatcaatttatatttagttaagtaagtcagcct |
30212194 |
T |
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