View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21160_high_11 (Length: 312)

Name: NF21160_high_11
Description: NF21160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21160_high_11
NF21160_high_11
[»] chr5 (26 HSPs)
chr5 (23-302)||(3114015-3114294)
chr5 (121-249)||(37873588-37873716)
chr5 (99-249)||(35310477-35310627)
chr5 (28-249)||(27336722-27336944)
chr5 (148-240)||(25663009-25663101)
chr5 (38-249)||(32269663-32269875)
chr5 (99-246)||(15291954-15292101)
chr5 (120-249)||(13166859-13166988)
chr5 (99-240)||(33691983-33692124)
chr5 (99-239)||(43115386-43115525)
chr5 (28-249)||(43129563-43129784)
chr5 (150-240)||(38875676-38875766)
chr5 (99-240)||(14423716-14423857)
chr5 (43-249)||(35455985-35456192)
chr5 (28-199)||(433371-433543)
chr5 (152-232)||(26212564-26212644)
chr5 (175-240)||(34335375-34335440)
chr5 (153-246)||(32230489-32230582)
chr5 (173-249)||(42921726-42921802)
chr5 (192-242)||(430638-430688)
chr5 (164-225)||(8858969-8859030)
chr5 (150-240)||(8100590-8100680)
chr5 (170-242)||(14436536-14436605)
chr5 (196-246)||(14723269-14723319)
chr5 (148-242)||(9829331-9829423)
chr5 (178-243)||(26577407-26577472)
[»] chr4 (31 HSPs)
chr4 (28-249)||(31847116-31847338)
chr4 (23-242)||(53619622-53619842)
chr4 (126-240)||(55933417-55933531)
chr4 (28-243)||(50000781-50000998)
chr4 (113-249)||(56462049-56462184)
chr4 (99-249)||(132414-132566)
chr4 (154-235)||(23255747-23255828)
chr4 (127-240)||(48656866-48656979)
chr4 (129-249)||(30940697-30940816)
chr4 (125-240)||(12918326-12918441)
chr4 (99-249)||(25504324-25504472)
chr4 (111-249)||(26521517-26521655)
chr4 (133-250)||(50462908-50463025)
chr4 (130-249)||(600651-600770)
chr4 (151-249)||(34107674-34107774)
chr4 (82-212)||(53170573-53170703)
chr4 (129-240)||(12053451-12053562)
chr4 (113-240)||(16957580-16957707)
chr4 (173-249)||(43849350-43849426)
chr4 (195-242)||(24719970-24720017)
chr4 (186-249)||(50483211-50483274)
chr4 (85-195)||(38535500-38535610)
chr4 (151-249)||(46440869-46440967)
chr4 (164-240)||(28739943-28740020)
chr4 (197-249)||(3330025-3330077)
chr4 (255-291)||(45661655-45661691)
chr4 (194-249)||(7536594-7536649)
chr4 (179-225)||(46391323-46391369)
chr4 (164-226)||(52022166-52022228)
chr4 (179-240)||(6865828-6865889)
chr4 (170-243)||(45386060-45386133)
[»] chr6 (25 HSPs)
chr6 (99-249)||(33220639-33220789)
chr6 (128-249)||(17249262-17249383)
chr6 (99-249)||(959609-959759)
chr6 (99-242)||(357645-357788)
chr6 (99-247)||(45605-45753)
chr6 (42-249)||(4206466-4206674)
chr6 (99-249)||(34304525-34304675)
chr6 (99-243)||(28008915-28009062)
chr6 (42-191)||(32115776-32115926)
chr6 (99-249)||(34415465-34415615)
chr6 (38-225)||(12401384-12401572)
chr6 (125-233)||(34168913-34169021)
chr6 (143-249)||(24016366-24016472)
chr6 (111-237)||(34554217-34554343)
chr6 (169-249)||(4165920-4166000)
chr6 (28-239)||(29337939-29338147)
chr6 (28-181)||(20693457-20693610)
chr6 (99-240)||(28543413-28543554)
chr6 (153-242)||(3714953-3715042)
chr6 (147-240)||(28625968-28626062)
chr6 (159-242)||(6225108-6225191)
chr6 (174-243)||(7200540-7200607)
chr6 (257-298)||(28009096-28009137)
chr6 (102-226)||(13398113-13398237)
chr6 (258-298)||(29338189-29338229)
[»] chr1 (27 HSPs)
chr1 (99-249)||(34644595-34644745)
chr1 (82-249)||(19035476-19035643)
chr1 (43-232)||(50161288-50161478)
chr1 (38-249)||(28040993-28041205)
chr1 (42-249)||(29169664-29169871)
chr1 (89-249)||(25375751-25375911)
chr1 (98-248)||(42919890-42920039)
chr1 (23-249)||(45659498-45659726)
chr1 (129-240)||(31737281-31737392)
chr1 (99-240)||(2764517-2764658)
chr1 (43-250)||(37200011-37200217)
chr1 (174-239)||(21473042-21473107)
chr1 (148-247)||(20259774-20259873)
chr1 (40-249)||(4861857-4862067)
chr1 (151-249)||(22346924-22347022)
chr1 (125-242)||(16500070-16500187)
chr1 (150-249)||(2898731-2898833)
chr1 (153-246)||(36486918-36487011)
chr1 (150-226)||(23043929-23044005)
chr1 (99-218)||(37932146-37932264)
chr1 (200-249)||(24177540-24177589)
chr1 (160-241)||(50314613-50314694)
chr1 (154-221)||(35387643-35387710)
chr1 (188-249)||(7213279-7213341)
chr1 (179-213)||(19035424-19035458)
chr1 (207-249)||(47459711-47459753)
chr1 (257-298)||(38731566-38731607)
[»] chr8 (23 HSPs)
chr8 (23-249)||(35739838-35740064)
chr8 (101-240)||(38815332-38815471)
chr8 (99-242)||(39434703-39434846)
chr8 (99-249)||(500256-500406)
chr8 (27-249)||(25021669-25021892)
chr8 (99-249)||(3187998-3188148)
chr8 (82-249)||(24125057-24125224)
chr8 (129-249)||(6592604-6592724)
chr8 (40-243)||(8619849-8620047)
chr8 (114-249)||(10189572-10189707)
chr8 (128-242)||(4073571-4073685)
chr8 (164-234)||(8882371-8882441)
chr8 (146-242)||(28196228-28196324)
chr8 (129-209)||(37517163-37517243)
chr8 (153-249)||(6618313-6618409)
chr8 (126-202)||(11611199-11611275)
chr8 (161-239)||(10556283-10556361)
chr8 (253-298)||(25021919-25021964)
chr8 (147-292)||(42922103-42922247)
chr8 (144-228)||(4699919-4700002)
chr8 (211-250)||(43824017-43824056)
chr8 (170-232)||(39671170-39671232)
chr8 (127-184)||(8390234-8390291)
[»] chr7 (30 HSPs)
chr7 (99-242)||(28517215-28517358)
chr7 (42-240)||(4501296-4501495)
chr7 (99-249)||(21326766-21326916)
chr7 (23-249)||(43856903-43857130)
chr7 (42-248)||(45613712-45613919)
chr7 (111-249)||(32584630-32584768)
chr7 (82-246)||(982981-983145)
chr7 (42-240)||(5825311-5825508)
chr7 (137-249)||(19277322-19277434)
chr7 (98-249)||(27521500-27521651)
chr7 (99-249)||(2904394-2904544)
chr7 (82-242)||(3676675-3676836)
chr7 (153-249)||(30216040-30216136)
chr7 (114-249)||(22198015-22198150)
chr7 (114-249)||(22239671-22239806)
chr7 (111-249)||(24527618-24527756)
chr7 (164-249)||(42295177-42295262)
chr7 (149-245)||(10905151-10905246)
chr7 (169-240)||(40726478-40726549)
chr7 (105-241)||(9281066-9281201)
chr7 (105-241)||(9292037-9292172)
chr7 (111-199)||(33202405-33202493)
chr7 (129-249)||(34067820-34067939)
chr7 (111-234)||(25186876-25186999)
chr7 (111-240)||(34772819-34772946)
chr7 (129-197)||(1249667-1249735)
chr7 (41-242)||(38839360-38839564)
chr7 (257-298)||(43856831-43856872)
chr7 (164-236)||(43383211-43383283)
chr7 (198-246)||(48539213-48539261)
[»] chr3 (26 HSPs)
chr3 (82-247)||(44198798-44198963)
chr3 (106-242)||(46940705-46940841)
chr3 (43-249)||(7900887-7901094)
chr3 (23-249)||(53785738-53785965)
chr3 (111-249)||(39583169-39583307)
chr3 (36-249)||(49017992-49018206)
chr3 (143-247)||(37132971-37133075)
chr3 (99-249)||(52741439-52741590)
chr3 (125-249)||(26772787-26772911)
chr3 (115-249)||(4473090-4473224)
chr3 (82-249)||(13582539-13582705)
chr3 (99-226)||(37992384-37992511)
chr3 (128-249)||(5338672-5338796)
chr3 (178-243)||(38670887-38670952)
chr3 (111-242)||(38146092-38146223)
chr3 (172-249)||(32546824-32546901)
chr3 (129-249)||(3443270-3443390)
chr3 (129-249)||(38978757-38978877)
chr3 (170-249)||(7502010-7502090)
chr3 (155-242)||(54508367-54508455)
chr3 (178-240)||(51234654-51234716)
chr3 (155-226)||(43123197-43123268)
chr3 (183-240)||(52411903-52411960)
chr3 (247-291)||(7502109-7502153)
chr3 (28-73)||(29862003-29862048)
chr3 (170-242)||(35484691-35484763)
[»] scaffold0490 (1 HSPs)
scaffold0490 (82-249)||(6363-6529)
[»] scaffold0148 (1 HSPs)
scaffold0148 (99-249)||(33279-33428)
[»] chr2 (22 HSPs)
chr2 (36-239)||(23484802-23485006)
chr2 (42-249)||(41867778-41867986)
chr2 (38-249)||(2888545-2888753)
chr2 (99-240)||(5532457-5532598)
chr2 (129-249)||(4413024-4413144)
chr2 (82-242)||(9685326-9685486)
chr2 (23-246)||(19161634-19161858)
chr2 (111-249)||(28225029-28225167)
chr2 (99-208)||(44686490-44686598)
chr2 (23-249)||(17344667-17344894)
chr2 (152-232)||(1296031-1296111)
chr2 (170-246)||(13147096-13147175)
chr2 (99-240)||(27502400-27502540)
chr2 (164-245)||(34814812-34814893)
chr2 (173-236)||(18744956-18745019)
chr2 (111-240)||(3825764-3825894)
chr2 (179-249)||(33612555-33612625)
chr2 (194-248)||(2886638-2886692)
chr2 (164-242)||(5679314-5679392)
chr2 (199-246)||(20142753-20142800)
chr2 (99-176)||(9674946-9675023)
chr2 (174-227)||(44720374-44720427)
[»] scaffold0224 (1 HSPs)
scaffold0224 (98-248)||(18292-18441)
[»] scaffold0186 (1 HSPs)
scaffold0186 (99-249)||(10389-10543)
[»] scaffold1768 (1 HSPs)
scaffold1768 (42-246)||(54-259)
[»] scaffold0110 (1 HSPs)
scaffold0110 (23-249)||(47390-47617)
[»] scaffold0031 (1 HSPs)
scaffold0031 (147-240)||(49449-49542)
[»] scaffold0009 (1 HSPs)
scaffold0009 (111-249)||(103135-103272)
[»] scaffold0493 (1 HSPs)
scaffold0493 (180-249)||(8525-8594)
[»] scaffold0119 (1 HSPs)
scaffold0119 (137-221)||(16191-16275)
[»] scaffold0470 (1 HSPs)
scaffold0470 (153-249)||(7631-7727)
[»] scaffold0085 (1 HSPs)
scaffold0085 (164-217)||(37391-37444)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 23 - 302
Target Start/End: Original strand, 3114015 - 3114294
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattagggg 122  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114015 atcaacacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattagggg 3114114  T
Q  123 ttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatacc 222  Q
    | ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3114115 tcggggcttttacggtaggacaggcagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatacc 3114214  T
Q  223 atttgtttttgacacttttggtttccttctacaaagttcaaagggtcatgcacaacaatgtcataactccaaggtctgtg 302  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3114215 atttgtttttgacacttttggtttccttctacagagttcaaagggtcatgcacaacaatgtcataactccaaggtctgtg 3114294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 37873588 - 37873716
Alignment:
Q  121 ggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttata 220  Q
    ||||||||||||||||||||| |||||||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  37873588 ggttggggcttttacggtaggacagacagctctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttata 37873687  T
Q  221 ccatttgtttttgacacttttggtttcct 249  Q
    ||||||| ||||||||||||||| |||||    
T  37873688 ccatttgcttttgacacttttggcttcct 37873716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 35310627 - 35310477
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| |||||| ||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  35310627 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacaaccctaaaagatgcgtcaagcaaagtggccaaacatgagaaagcatgttc 35310528  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| ||||||||||| || |||||||||||| || |||||    
T  35310527 tgacaatcaacatgcttttataccatctgcttttgacactttcggcttcct 35310477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 28 - 249
Target Start/End: Complemental strand, 27336944 - 27336722
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 126  Q
    ||||||| | ||| |||||||||||||||  ||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||||||| ||    
T  27336944 cacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtggg 27336845  T
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    |||||||||  |||| |||||||||||||||||||| |||| |||||||| ||||||||||||| | |||||||||| |||||||  |||||||||||||    
T  27336844 ggcttttacaataggacagacagccctaaaagttgcgtcaagcaaagtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccattt 27336745  T
Q  227 gtttttgacacttttggtttcct 249  Q
    | ||||||||||| ||| |||||    
T  27336744 gcttttgacacttgtggcttcct 27336722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 148 - 240
Target Start/End: Original strand, 25663009 - 25663101
Alignment:
Q  148 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||    
T  25663009 agccctaaaagctgcatcaaacaaagtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacacttt 25663101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 32269663 - 32269875
Alignment:
Q  38 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 136  Q
    |||||||||||||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||| |||||| || ||| |||||| |    
T  32269663 tgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttctggaattaggtgtcgggccttttatg 32269762  T
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    ||||| ||  || ||||||||| |||||||| |||||||| ||||||||||||||  |||||||||| |||||| | |||||||||||||| |||||| |    
T  32269763 gtaggacatgcaaccctaaaagctgcatcaaccaaagtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgcttttgata 32269862  T
Q  237 cttttggtttcct 249  Q
    |||| | ||||||    
T  32269863 ctttcgatttcct 32269875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 99 - 246
Target Start/End: Original strand, 15291954 - 15292101
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  | |||||| | || ||| ||||| ||||| | |||||| |||||||||| || ||||||||||||||||||||||||||| | |||||    
T  15291954 tttcaccacttgttggattaagtgtcgggccttttgcggtatgacagacaaccctaaaagtggcgtcaaacaaagtggccaaacatgagaaaacgtgttc 15292053  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    ||||| ||||||||||||||||| |||||||||| |||||||| ||||    
T  15292054 tgacaatcaacatgtttttatacaatttgttttttacacttttagttt 15292101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 249
Target Start/End: Original strand, 13166859 - 13166988
Alignment:
Q  120 gggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttat 219  Q
    ||||| ||||||||||||| || |||||| ||||||||  ||| |||| ||||||||| |||||||||||||| |||||||||| |||||||| ||||||    
T  13166859 gggttagggcttttacggtgggacagacaaccctaaaatctgcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttat 13166958  T
Q  220 accatttgtttttgacacttttggtttcct 249  Q
    |||||||| |||||||||||| || |||||    
T  13166959 accatttgcttttgacactttcggcttcct 13166988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 240
Target Start/End: Original strand, 33691983 - 33692124
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| ||| ||| |||||||| ||| |||| |||||||||||||||||| ||| | ||||     
T  33691983 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacaggcaggcctaaaagctgcgtcaagcaaagtggccaaacatgacaaaacgtgtta 33692082  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||| |||||||| |||| ||||||||| ||||||||||||    
T  33692083 tgacaatcaacatgcttttgtaccatttgcttttgacacttt 33692124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 43115386 - 43115525
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| | ||| |||| || |||| |||||||||| ||||     
T  43115386 tttcaccactcatgggattagaggtcggggcttttacggtaggatagacagccctaaaagttgcgt-aaataaagcggtcaaatatgagaaagcgtgttt 43115484  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacactt 239  Q
    ||||| |||||||| ||| ||| |||||| |||||||||||    
T  43115485 tgacaatcaacatgctttcatagcatttgcttttgacactt 43115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 28 - 249
Target Start/End: Complemental strand, 43129784 - 43129563
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggg 127  Q
    ||||||| ||||||||||||||| |||||  |||| || ||||||| |  ||| |||  | |||||  |  ||||||||||  | ||||||||||| ||     
T  43129784 cacttaggcatgcagatgttatgatgtacggatggataggaggaaaaatgcatgtgtgaaattgactggggtttcaccacttgttggattaggggtcgga 43129685  T
Q  128 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 227  Q
     |||||||||| || ||  ||| |||||||| ||| |||| |||||||| ||||||||||||| | |||||||||| ||||||||||||| |||||||||    
T  43129684 acttttacggttggacattcagtcctaaaagatgcgtcaagcaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttg 43129585  T
Q  228 tttttgacacttttggtttcct 249  Q
     |||||||| ||| ||||||||    
T  43129584 cttttgacattttcggtttcct 43129563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 38875766 - 38875676
Alignment:
Q  150 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||||||  |||||||||||||| | |||||||||||||||  |||||||||| ||||||||||||| ||||||||||||||||||||||    
T  38875766 ccctaaaaactgcatcaaacaaagcgaccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacacttt 38875676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 14423857 - 14423716
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||||||||| || ||  |||| || ||||| ||| || ||||||||  ||| |||| ||||||| || ||||||||||||| |||||    
T  14423857 tttcaccacttgtgggattaggtgtcggacctttaaccgtaggacaggcaaccctaaaaaatgcgtcaagcaaagtgaccgaacatgagaaagcgtgttc 14423758  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||| |||||||| |||||||||||||| ||||||||||||    
T  14423757 tgacaatcaacatgcttttataccatttgcttttgacacttt 14423716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 249
Target Start/End: Complemental strand, 35456192 - 35455985
Alignment:
Q  43 atgttatggtgtacaaatgggtaagagg-aaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 141  Q
    ||||||||||||||| ||||||| |||| ||| |  ||| ||| ||||||||| |  |||  |||||| | |||||||||||  || |||||||||||||    
T  35456192 atgttatggtgtacagatgggtaggaggtaaatatgcatgtgtggacttgaccggggttttgccactcgtaggattaggggtccggccttttacggtagg 35456093  T
Q  142 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 241  Q
    | ||  ||||| ||||||||  | ||  ||| ||| ||||||||||||||| |||||| ||| |||||||| ||||||||| |||| |||||||| ||||    
T  35456092 gtaggtagcccaaaaagttgtgttaagtaaaatggtcaaacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaatttt 35455993  T
Q  242 ggtttcct 249  Q
    || |||||    
T  35455992 ggcttcct 35455985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 433543 - 433371
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacact-catttgtagacttgaccagtatttcaccactcatgggattaggggttgg 126  Q
    ||||||| ||||| |||||||||||||||| ||||||  |||||||   | ||| ||| ||||||||| |  |||||||||   |||| ||| |||| ||    
T  433543 cacttaggcatgcggatgttatggtgtacagatgggttggaggaaaatatgcatgtgtggacttgaccggggtttcaccacctgtgggtttaagggtagg 433444  T
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttct 199  Q
    |||||||||||||||  ||||| || |||||| ||  |||| |||||||||||||||||||||||| ||||||    
T  433443 ggcttttacggtaggatagacaaccttaaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttct 433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 26212564 - 26212644
Alignment:
Q  152 ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 232  Q
    ||||||||||| |||| |||||||||||||||||||||||| | |||||||  |||||||| |||||||||||||||||||    
T  26212564 ctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttgttttt 26212644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 34335440 - 34335375
Alignment:
Q  175 ggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||||||||||||||||||||    
T  34335440 ggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttgtttttgacacttt 34335375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 32230489 - 32230582
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    |||||||||| |||| ||||||| ||||||||||||||   |||||||||| |||||| | ||||||||||| ||  || ||||||||||||||    
T  32230489 taaaagttgcgtcaagcaaagtgaccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccatctgcgttcgacacttttggttt 32230582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 42921802 - 42921726
Alignment:
Q  173 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||| |||||| |||||| | |||||||||| |||||||| |||||||||||||| || ||||||||| ||||||||    
T  42921802 gtggtcaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttcct 42921726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 242
Target Start/End: Complemental strand, 430688 - 430638
Alignment:
Q  192 catgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  430688 catgttctgacaatcaacatgcttttataccatttgcttttgacacttttg 430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 225
Target Start/End: Complemental strand, 8859030 - 8858969
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 225  Q
    |||| |||||| | ||||||||||||||| |||||||||| |||||||||||||||| ||||    
T  8859030 tcaagcaaagtagtcaaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 8100680 - 8100590
Alignment:
Q  150 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||||| | ||||||||  ||| ||| ||||||||||||| | |||| ||||| |  ||||| ||||||||||||||||| |||||||||    
T  8100680 ccctaaacgctgcatcaagtaaaatggtcaaacatgagaaaacgtgttgtgacaatttacatgcttttataccatttgtttgtgacacttt 8100590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 242
Target Start/End: Complemental strand, 14436605 - 14436536
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||||||||||||||| ||| | |||||| |   |||||||||||||||| |||||||||||||||| ||||    
T  14436605 aaagtggccaaacatgaaaaaacgtgttctaa---tcaacatgtttttatatcatttgtttttgacacctttg 14436536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 14723269 - 14723319
Alignment:
Q  196 ttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    |||||||| |||||||| ||||||| ||||||||||| |||||||||||||    
T  14723269 ttctgacaatcaacatgcttttatatcatttgttttttacacttttggttt 14723319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 9829331 - 9829423
Alignment:
Q  148 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||||||||||||| | || ||||||||| || ||||| |||   |||| ||||| |||||||| ||||||||||||| | |||||||||||||    
T  9829331 agccctaaaagttgcgt-aagcaaagtggctaa-catgataaaatgtgttttgacaatcaacatgcttttataccatttatatttgacacttttg 9829423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 26577407 - 26577472
Alignment:
Q  178 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 243  Q
    ||||||| ||||||  ||||| |||  ||||||||||||||||| |||||| ||| ||||||||||    
T  26577407 caaacataagaaagtgtgttccgactatcaacatgtttttatacaatttgtgtttcacacttttgg 26577472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 28 - 249
Target Start/End: Complemental strand, 31847338 - 31847116
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 126  Q
    ||||||| | ||||||| |||||||||||| |||| |  ||||||| ||  ||| ||| |||||||| ||  ||||||||||  |||| |||||||| ||    
T  31847338 cacttaggcctgcagatattatggtgtacagatggattggaggaaaacatgcatgtgtggacttgactagggtttcaccacttgtgggtttaggggtggg 31847239  T
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    ||||||||| ||||| ||| |||||||||||| ||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  31847238 ggcttttacagtaggacaggcagccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccattt 31847139  T
Q  227 gtttttgacacttttggtttcct 249  Q
    | ||||||||||||||| |||||    
T  31847138 gcttttgacacttttggcttcct 31847116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 53619842 - 53619622
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| ||||||| | |||| ||||||||||||||  ||| ||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||| |    
T  53619842 atcaacacttaggcctgcatatgttatggtgtacggatgagttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttagag 53619743  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    || ||||||||||| ||||| ||| || ||||||||| ||| |||| |||||||||||||||||||||| | |||||||||| |||||||| ||||||||    
T  53619742 gtgggggcttttacagtaggacaggcaaccctaaaagctgcgtcaagcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatac 53619643  T
Q  222 catttgtttttgacacttttg 242  Q
    |||||||||||||||||||||    
T  53619642 catttgtttttgacacttttg 53619622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 55933417 - 55933531
Alignment:
Q  126 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 225  Q
    |||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||  |||||| ||| |||||||| ||||||||||||    
T  55933417 gggcttttacggtaggacagtcagccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccatt 55933516  T
Q  226 tgtttttgacacttt 240  Q
    || ||||||||||||    
T  55933517 tgcttttgacacttt 55933531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 28 - 243
Target Start/End: Original strand, 50000781 - 50000998
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 126  Q
    ||||||| | ||| |||||||||||||||  ||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| | |||||| ||    
T  50000781 cacttaggcctgcggatgttatggtgtacggatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggttaaggggtggg 50000880  T
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg-tttttataccatt 225  Q
    ||||||||||||||| |||||||| ||||||| ||| |||| |||||||| ||||||||||||||| |||||||||| |||||||| |||| |||| |||    
T  50000881 ggcttttacggtaggacagacagctctaaaagctgcgtcaagcaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatt 50000980  T
Q  226 tgtttttgacacttttgg 243  Q
    || |||||||||||||||    
T  50000981 tgcttttgacacttttgg 50000998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 249
Target Start/End: Original strand, 56462049 - 56462184
Alignment:
Q  113 ggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg 212  Q
    ||||||||||| | | |||||||||| |   ||||  ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||| ||||||||    
T  56462049 ggattaggggtcgagacttttacggttgtatagaccaccctaaaagttgcgtcaaacaaagtggc-aaacatgataaagcgtgttctgacaatcaacatg 56462147  T
Q  213 tttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||||||||||| |||||||||||||||||    
T  56462148 tttttataccatttgttttagacacttttggtttcct 56462184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 132566 - 132414
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggt--agggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgt 196  Q
    ||||||||||  | ||||||||||| ||| ||||||||||  ||| ||| |||||||||||| ||| |||| |||| |||| |||||||||||| | |||    
T  132566 tttcaccacttgttggattaggggtcgggacttttacggtgtaggacaggcagccctaaaagctgcgtcaagcaaaatggcaaaacatgagaaatcgtgt 132467  T
Q  197 tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||| ||||||||    
T  132466 tctgacaatcaacatgcttttataccatttgttttttacactttcggtttcct 132414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 235
Target Start/End: Complemental strand, 23255828 - 23255747
Alignment:
Q  154 aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgac 235  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||    
T  23255828 aaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttgtttttgac 23255747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 48656866 - 48656979
Alignment:
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    ||||||||| ||| | |||||||||||||||||| ||||||  ||| ||| ||||||||||||||  |||| || || |||| |||||||||||||||||    
T  48656866 ggcttttacagtatgacagacagccctaaaagtttcatcaagtaaaatggacaaacatgagaaagtgtgttatgtcaatcaaaatgtttttataccattt 48656965  T
Q  227 gtttttgacacttt 240  Q
    ||||||||||||||    
T  48656966 gtttttgacacttt 48656979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 30940697 - 30940816
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    |||||||  |||| |||||| ||||||||||||| ||||  ||||||| ||||||||||||||| |||||||||| |||||||| |||||||||| |||     
T  30940697 cttttaccataggacagacaaccctaaaagttgcgtcaagtaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttatacca-ttgc 30940795  T
Q  229 ttttgacacttttggtttcct 249  Q
    |||||||||||| | ||||||    
T  30940796 ttttgacactttcgatttcct 30940816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 240
Target Start/End: Original strand, 12918326 - 12918441
Alignment:
Q  125 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 224  Q
    ||||||||||||||||| || ||| ||||||||||||| ||||||||||||| ||||||| ||||| | |||||||||| ||||||   |||||||| ||    
T  12918326 ggggcttttacggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactat 12918425  T
Q  225 ttgtttttgacacttt 240  Q
    ||  ||||||||||||    
T  12918426 ttacttttgacacttt 12918441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 25504472 - 25504324
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||||||||| ||  || ||||||||||| | ||| || ||||||| |||||||||| |||| ||| ||||||||||||| | |||||    
T  25504472 tttcaccacttgtgggattaggcgtcaggccttttacggtatgacaggcaaccctaaa-gttgcatcaagcaaa-tggtcaaacatgagaaaacgtgttc 25504375  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    | ||| || ||||||||||||||| |||| |||||||| ||||||||||||    
T  25504374 taacaatcgacatgtttttataccgtttgcttttgacatttttggtttcct 25504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 26521655 - 26521517
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||||||||||  |  |||||| |||||| || ||| ||||||||||||| |||||||||||||| |||||||| ||| | |||| ||||| ||||||    
T  26521655 tgggattaggggtcagaccttttatggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggctaaacatgaaaaaacgtgttatgacaatcaaca 26521556  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || ||||||| ||| || |||  ||||||||||||||||    
T  26521555 tgcttttatatcatatgctttcaacacttttggtttcct 26521517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 50462908 - 50463025
Alignment:
Q  133 tacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 232  Q
    ||||||||| ||||||||| |||||||||| |||| |||  || |||||||||||||||  | ||| |||| |||||||| ||| |||||||||| ||||    
T  50462908 tacggtaggacagacagccttaaaagttgcgtcaagcaagatgaccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgctttt 50463007  T
Q  233 gacacttttggtttcctt 250  Q
    |||||||||| |||||||    
T  50463008 gacacttttgatttcctt 50463025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 600651 - 600770
Alignment:
Q  130 ttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtt 229  Q
    |||||| ||||| |||||| |||||||||||   |||| ||||||| |||||||||||||| | |||||| ||| | |||||| |||||||||||||| |    
T  600651 ttttactgtaggacagacaaccctaaaagttatgtcaagcaaagtgaccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgct 600750  T
Q  230 tttgacacttttggtttcct 249  Q
    |||| |||||| ||||||||    
T  600751 tttgtcactttcggtttcct 600770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 34107674 - 34107774
Alignment:
Q  151 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgt--tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 248  Q
    ||||||| |||| |||||| |||||||||||||||||||| | |||  || || | |||||||||||||||||||||||||||||||||||| | |||||    
T  34107674 cctaaaaattgcgtcaaacgaagtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcc 34107773  T
Q  249 t 249  Q
    |    
T  34107774 t 34107774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 53170703 - 53170573
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  |  ||||||||||| |||||||||| || ||  ||||||| ||| | ||| ||||||||||||| |  | |   ||||| ||||||    
T  53170703 tgtagacttgactggggtttcaccactcgtgggattaggtgtcggaccttttacagtatgacaggcagccctaaaagtcgtgttaggtaaagtagccaaa 53170604  T
Q  182 catgagaaagcatgttctgacagtcaacatg 212  Q
    ||||||||||| |||||||||||||||||||    
T  53170603 catgagaaagcgtgttctgacagtcaacatg 53170573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 12053562 - 12053451
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    ||||||| ||||| || ||||| ||||||| ||| ||||||||||| | ||||||||||||| | |||||| ||| |||| | ||||||||| ||||||     
T  12053562 cttttacagtaggacaaacagctctaaaagctgcgtcaaacaaagttgtcaaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgc 12053463  T
Q  229 ttttgacacttt 240  Q
    ||| ||| ||||    
T  12053462 tttcgactcttt 12053451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 240
Target Start/End: Complemental strand, 16957707 - 16957580
Alignment:
Q  113 ggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatg 212  Q
    ||||||||||| ||| || |||| |||||  || ||| |||||||||||| |  | |||| || |||||||||||||||  || ||||| | ||||||||    
T  16957707 ggattaggggtcgggcctcttacagtaggataggcagtcctaaaagttgcgtagagcaaaatgaccaaacatgagaaagtgtgctctgataatcaacatg 16957608  T
Q  213 tttttataccatttgtttttgacacttt 240  Q
     || ||||||||||| ||||||||||||    
T  16957607 cttatataccatttgcttttgacacttt 16957580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 43849350 - 43849426
Alignment:
Q  173 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||| |||||||| ||||| || |  ||||||| |||||||| |||||| |||||||||||||| |||||    
T  43849350 gtggccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttcct 43849426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 24720017 - 24719970
Alignment:
Q  195 gttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||    
T  24720017 gttctgacaatcaacatgtttttatatcatttgtgtttgacacttttg 24719970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 50483211 - 50483274
Alignment:
Q  186 agaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| | |||||||| |||||||| |||||||||||||| ||| |||||||| ||||||||    
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctttcgacactttcggtttcct 50483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 195
Target Start/End: Original strand, 38535500 - 38535610
Alignment:
Q  85 agacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacat 184  Q
    ||||||||| ||  |||||| |||  ||||||| | ||||||||||||||  ||||  |||||||| ||||||||||  || |||||||||| |||| ||    
T  38535500 agacttgactagggtttcactacttgtgggatttgaggttggggcttttaatgtagaacagacagctctaaaagttgtgtctaacaaagtggtcaaatat 38535599  T
Q  185 gagaaagcatg 195  Q
     ||||||||||    
T  38535600 aagaaagcatg 38535610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 46440869 - 46440967
Alignment:
Q  151 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||  | ||||||||||||| ||||||| | ||||  |||||| ||| | |||| ||||||||| |||||| |||||||||||| || |||||    
T  46440869 cctaaaagtaacgtcaaacaaagtggtcaaacataaaaaagtgtgttctaacaattaacacgtttttatatcatttgcttttgacactttcggcttcct 46440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 28740020 - 28739943
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt-ttttataccatttgtttttgacacttt 240  Q
    ||||| |||||||||||||| ||||||   |||| ||||||| ||||||| ||||||||||||| | |||||||||||    
T  28740020 tcaaataaagtggccaaacacgagaaattgtgttgtgacagttaacatgtgttttataccatttatgtttgacacttt 28739943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 3330077 - 3330025
Alignment:
Q  197 tctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| |||||||| |||||||| ||||| ||||||||||||||| |||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttcct 3330025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 45661691 - 45661655
Alignment:
Q  255 aaagttcaaagggtcatgcacaacaatgtcataactc 291  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45661691 aaagttcaaagggtcatacacaacaatgtcataactc 45661655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 7536594 - 7536649
Alignment:
Q  194 tgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||| ||||| ||||||||||||||||| |||||||||||||| |||  |||||||    
T  7536594 tgttttgacaatcaacatgtttttatacaatttgtttttgacaatttcagtttcct 7536649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 46391323 - 46391369
Alignment:
Q  179 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 225  Q
    ||||| |||||| |||||||| |||| ||||||||||||||||||||    
T  46391323 aaacacgagaaaacatgttctcacagccaacatgtttttataccatt 46391369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 52022228 - 52022166
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    |||| ||||||| ||||| |||||| |   ||||||||||||| |||||||||||||||||||    
T  52022228 tcaatcaaagtgaccaaaaatgagagaaagtgttctgacagtcgacatgtttttataccattt 52022166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 6865828 - 6865889
Alignment:
Q  179 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||| |||||| | |||||||||  |||||||| ||||||| |||||| ||||||||||||    
T  6865828 aaacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacacttt 6865889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 45386060 - 45386133
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 243  Q
    ||||||| ||||||| ||||||| |||||||||| ||||  | ||||||||||||||   ||||| ||||||||    
T  45386060 aaagtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttacatttgaaacttttgg 45386133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 249
Target Start/End: Original strand, 33220639 - 33220789
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||| |||      
T  33220639 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacagacagctctaaaagctgcatcaagcaaagtggccaaacatgagaaagcgtgtgt 33220738  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| |||||||||||||| |||||||||||| || |||||    
T  33220739 tgacaatcaacatgcttttataccatttgcttttgacactttcggcttcct 33220789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 249
Target Start/End: Original strand, 17249262 - 17249383
Alignment:
Q  128 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 227  Q
    |||||||||||||| || ||| ||||||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||    
T  17249262 gcttttacggtaggacaaacaaccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttg 17249361  T
Q  228 tttttgacacttttggtttcct 249  Q
     ||||||||||||||| |||||    
T  17249362 cttttgacacttttggcttcct 17249383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 959759 - 959609
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    |||||||||| ||||||||||| || ||| ||||||||||||| || ||| ||||||||||||  |||| ||||||||| || ||||||||| | |||||    
T  959759 tttcaccacttatgggattaggtgtcgggccttttacggtaggacaaacaaccctaaaagttgtgtcaagcaaagtggctaaccatgagaaaacgtgttc 959660  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| ||||||||| |||||||||||||||||||||| ||| ||||||||    
T  959659 tgacaatcaacatgtctttataccatttgtttttgacattttcggtttcct 959609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 357645 - 357788
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| || |||||||||||||| ||| |||||||||||| | | |||| |||||||||||||||||||||||| |||||    
T  357645 tttcaccacttgtgggtttaggggtcggtgcttttacggtaggacaggcagccctaaaagcttcgtcaagcaaagtggccaaacatgagaaagcgtgttc 357744  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||| | |||||| ||||||| | ||||||||| |||||||||    
T  357745 tgacaatgaacatgcttttataacctttgtttttaacacttttg 357788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 99 - 247
Target Start/End: Original strand, 45605 - 45753
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||||||||| || ||  ||||||| ||||| ||| |||| ||||||| |||||||| |||||||  ||||||||||||| | |||||    
T  45605 tttcaccacttgtgggattaggtgtcggaccttttaccgtaggacaggcagctctaaaagctgcatcaagcaaagtgatcaaacatgagaaaacgtgttc 45704  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 247  Q
    ||||| |||||||| |||||| |||||||||||||||||||| ||||||    
T  45705 tgacaatcaacatgcttttattccatttgtttttgacactttcggtttc 45753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 249
Target Start/End: Original strand, 4206466 - 4206674
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    |||||||||||||||||||||||  ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||||||||||  |  |  ||||||||||||    
T  4206466 gatgttatggtgtacaaatgggttggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggcatcagaccttttacggtag 4206565  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | ||  ||||| ||||||| || |||| ||||||||| |||||||||||||| |||||||||| | |||||| ||||||| |||||| ||||||||||||    
T  4206566 gacatgcagccttaaaagtggcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacacttt 4206665  T
Q  241 tggtttcct 249  Q
     || |||||    
T  4206666 cgggttcct 4206674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 34304675 - 34304525
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| ||||| || |||||||||||||| || |||  ||||||||||| ||| |||| |||| |  |||||||||||||||| |||||    
T  34304675 tttcaccacttgtgggtttaggagtcggggcttttacggttggacagctagccctaaaagctgcgtcaagcaaaataaccaaacatgagaaagcgtgttc 34304576  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| |||||||||||||| |||||||||||| || |||||    
T  34304575 tgacaatcaacatgcttttataccatttgcttttgacactttgggcttcct 34304525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 28008915 - 28009062
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||  || ||||||||| | | |||| ||||| || ||||||||||||||| |||||    
T  28008915 tttcaccactcgtgggattaggggtcggggcttttacggtaggacatgcaaccctaaaagctacgtcaagcaaagcggtcaaacatgagaaagcttgttc 28009014  T
Q  199 tgacagtc---aacatgtttttataccatttgtttttgacacttttgg 243  Q
    | ||| ||   || ||| |||||||||||||| |||||||||||||||    
T  28009015 taacaatcaagaatatggttttataccatttgcttttgacacttttgg 28009062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 191
Target Start/End: Complemental strand, 32115926 - 32115776
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    |||||||||||||||| ||| ||| ||||||| ||  ||| ||||||||||||| |  ||||| |||| ||||||||||| || |||  ||||||| |||    
T  32115926 gatgttatggtgtacagatgagtaggaggaaaacatgcatgtgtagacttgaccggggtttcatcacttatgggattaggtgtcgggcattttacgttag 32115827  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaag 191  Q
    | ||  ||||| |||||||||| ||||||||||||||||||||||||||||    
T  32115826 gacatgcagccttaaaagttgcgtcaaacaaagtggccaaacatgagaaag 32115776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 34415615 - 34415465
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||| | | |||||||||||  || |||||||||||||  || || || || ||| ||| |||| |||| |||| |||||||||||||  |||||    
T  34415615 tttcaccacacgttggattaggggtcaggacttttacggtaggataggcatccttacaagctgcgtcaagcaaaatggcgaaacatgagaaagtgtgttc 34415516  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| |||||| |||||||||||||||||||| ||||||||    
T  34415515 tgacaatcaacatgcttttatgccatttgtttttgacactttaggtttcct 34415465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 38 - 225
Target Start/End: Complemental strand, 12401572 - 12401384
Alignment:
Q  38 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 136  Q
    |||| ||||||||||||||  ||||||| ||||||| ||  ||| |||||||||||   |  |||||||||| ||||||||| || |  ||||||||| |    
T  12401572 tgcaaatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgattggggtttcaccacttatgggattatggttcagggcttttatg 12401473  T
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 225  Q
    ||||| ||  |||| ||||||||||| ||||||||||||||||||||| ||| ||| |||| ||  | |||||||| || |||||||||    
T  12401472 gtaggacaagcagcactaaaagttgcgtcaaacaaagtggccaaacataagatagcgtgttttgctaatcaacatgcttatataccatt 12401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 34169021 - 34168913
Alignment:
Q  125 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 224  Q
    ||||||||||| ||||| ||  || |||||||| |||| |||| |||||||||||||||||||||||||||||  ||||  ||||||| |||||||||||    
T  34169021 ggggcttttaccgtaggacatgcaaccctaaaatttgcgtcaagcaaagtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccat 34168922  T
Q  225 ttgtttttg 233  Q
    ||| |||||    
T  34168921 ttgcttttg 34168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 249
Target Start/End: Complemental strand, 24016472 - 24016366
Alignment:
Q  143 cagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||||| || |||||||||||||||  ||| | | ||||||||||||||| |||||| ||| ||||||||||||||||||||||| | |||| | |||||    
T  24016472 cagacaaccgtaaaagttgcatcaagtaaaatagtcaaacatgagaaagcttgttctcacaatcaacatgtttttataccatttgctattgatagttttg 24016373  T
Q  243 gtttcct 249  Q
    |||||||    
T  24016372 gtttcct 24016366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 237
Target Start/End: Original strand, 34554217 - 34554343
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    ||||||||||| |  |||||||||  ||||| |||||| | ||||||||||| |||| ||||  | |||||||||||||||| |||||||| | |||| |    
T  34554217 tgggattagggatcagggcttttaaagtaggtcagacaacactaaaagttgcgtcaagcaaaacgaccaaacatgagaaagcgtgttctgataatcaaga 34554316  T
Q  211 tgtttttataccatttgtttttgacac 237  Q
    ||||||||||||||||  |||||||||    
T  34554317 tgtttttataccatttacttttgacac 34554343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 4165920 - 4166000
Alignment:
Q  169 caaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||| |||||||||||||| |||||||||| |||||||| ||||||| |||||| |||||||||||| || |||||    
T  4165920 caaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttcct 4166000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 29337939 - 29338147
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttgg 126  Q
    ||||||| | ||||||||||||||||| || ||||||| ||||||| ||  ||| ||| ||||||| |    ||| |||||||    |||||| ||| ||    
T  29337939 cacttaggcctgcagatgttatggtgtgcagatgggtaggaggaaaacatgcatgtgtggacttgatcgaggttttaccactc----gattagtggtcgg 29338034  T
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    ||||||||||||||| || |||  | |||||| ||  |||| |||||  ||||||||||||||| | |||||| ||| |||||||| | |||||||||||    
T  29338035 ggcttttacggtaggacaaacaatcataaaagatgtgtcaagcaaagctgccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccattt 29338134  T
Q  227 gtttttgacactt 239  Q
    | |||||||||||    
T  29338135 gcttttgacactt 29338147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 28 - 181
Target Start/End: Original strand, 20693457 - 20693610
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggg 127  Q
    ||||||| | ||||||| |||||||||||| ||||||| |||||||   |  | |||  |||||| |||  ||||||||||| ||||||||| |||  |     
T  20693457 cacttaggcctgcagatattatggtgtacagatgggtaggaggaaaacatgctatgtgaacttgatcagggtttcaccactcgtgggattagaggtctga 20693556  T
Q  128 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    |||||||| ||||  || || |||||||| ||||||||||||||||||||||||    
T  20693557 gcttttacagtagaacatacggccctaaaggttgcatcaaacaaagtggccaaa 20693610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 28543554 - 28543413
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  ||||||||| |||  || ||||||||||| | ||| ||||| ||||||| || |||| |||||||||||||||||||||| | ||||     
T  28543554 tttcaccacttgtgggattagaggtcaggacttttacggtaagacaggcagccttaaaagtcgcgtcaagcaaagtggccaaacatgagaaatcgtgttt 28543455  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||| | |||  ||| | |||||| ||||| ||||||||||||    
T  28543454 tgaaaatcactatgctcttatactatttgattttgacacttt 28543413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 3715042 - 3714953
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||||||||  ||||||||| |||  |||||||||||| | |||||| ||| | |||||||||||||| ||| |||||||||||||||||    
T  3715042 taaaagttgtgtcaaacaaaatggttaaacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgtttttgacacttttg 3714953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 28626062 - 28625968
Alignment:
Q  147 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgttttt-ataccatttgtttttgacacttt 240  Q
    ||||||| |||| ||| ||||  || ||||| ||||| |||||| | |||||||||| ||||||| ||||| ||||||||||||||| |||||||    
T  28626062 cagcccttaaagctgcgtcaagtaaggtggctaaacacgagaaaacgtgttctgacaatcaacattttttttataccatttgttttttacacttt 28625968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 6225191 - 6225108
Alignment:
Q  159 ttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||| ||||| ||||||| |||||||||||||   |||| ||||| |||||||| || |||  ||||||| |||||||||||||    
T  6225191 ttgcgtcaaataaagtggtcaaacatgagaaattttgttgtgacaatcaacatgcttatatgtcatttgtgtttgacacttttg 6225108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 7200540 - 7200607
Alignment:
Q  174 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 243  Q
    ||||||||||||||||| |  ||||  ||| |||||||||||||||  ||||||| ||||||||||||||    
T  7200540 tggccaaacatgagaaatcgagttcaaacaatcaacatgtttttat--catttgtgtttgacacttttgg 7200607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 28009096 - 28009137
Alignment:
Q  257 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 298  Q
    ||||||||||||||| |||||||||||||| ||||| |||||    
T  28009096 agttcaaagggtcatacacaacaatgtcatgactcctaggtc 28009137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 13398113 - 13398237
Alignment:
Q  102 caccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctga 201  Q
    ||||| || ||||||||| ||||| | ||||||||||||   |||||   ||| |||||| |||||  |||  || |||| |||| ||||||||||| ||    
T  13398113 caccattcctgggattagcggttgagacttttacggtagaatagacaattctacaagttgtatcaagtaaaacggtcaaatatgaaaaagcatgttccga 13398212  T
Q  202 cagtcaacatgtttttataccattt 226  Q
    || ||||||| ||||||||| ||||    
T  13398213 caatcaacatatttttatactattt 13398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 29338189 - 29338229
Alignment:
Q  258 gttcaaagggtcatgcacaacaatgtcataactccaaggtc 298  Q
    ||||||||||||||||||| ||||||||| ||||| |||||    
T  29338189 gttcaaagggtcatgcacatcaatgtcatgactcctaggtc 29338229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 34644745 - 34644595
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| ||||||||||||||||| ||  || ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  34644745 tttcaccacttgtgggtttaggggtcggggcttttacggtaggacaagcaaccctaaaagttgcgtcaaacaaagtggccaaacatgagaaagcgtgttc 34644646  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||  | ||||| ||||||||||||||||||||||||||| || |||||    
T  34644645 tgacaacctacatgcttttataccatttgtttttgacactttcggcttcct 34644595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 19035643 - 19035476
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  | ||||||||| |  |||||||||| || ||  ||||||| ||||||||| |||||||||||| ||| |||| |||||||||||||    
T  19035643 tgtagacttgactgggatttcaccagttgtgggattaggtgtcggaccttttaccgtagggcaggcagccctaaaagctgcgtcaagcaaagtggccaaa 19035544  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||  |||||||||||  ||||||||    
T  19035543 catgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacacttacggtttcct 19035476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 43 - 232
Target Start/End: Original strand, 50161288 - 50161478
Alignment:
Q  43 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 141  Q
    ||||||||||||||   |||||||||| ||| ||  ||| ||| ||||| |||  ||||||||||||| ||| |||||||| || | |||||||||||||    
T  50161288 atgttatggtgtacggttgggtaagagaaaaacatgcatgtgtggacttaaccgatatttcaccactcgtggaattaggggctgagacttttacggtagg 50161387  T
Q  142 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 232  Q
     |||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||| ||| |||||||| ||||||| ||||| |||||    
T  50161388 acagacaaccctaaaagttgcgtcaagcaaagtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcattttttttt 50161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 28040993 - 28041205
Alignment:
Q  38 tgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 136  Q
    |||||||||||||||||||| ||||||| | ||||| ||  | | ||||||||||||  |  |||||| |||  |||||||||| || ||  |||||||     
T  28040993 tgcagatgttatggtgtacagatgggtaggtggaaaacatgcttgtgtagacttgactggggtttcactacttgtgggattaggtgtcggaccttttacc 28041092  T
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    |||||  || |||| ||||||   || ||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||| ||||||||    
T  28041093 gtaggataggcagctctaaaatccgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgaca 28041192  T
Q  237 cttttggtttcct 249  Q
    |||| ||||||||    
T  28041193 ctttcggtttcct 28041205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 249
Target Start/End: Original strand, 29169664 - 29169871
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    |||||||||||||||  || |||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  |||||||||| || ||| ||||||| ||||    
T  29169664 gatgttatggtgtacggataggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccactt-tgggattaggtgtcgggccttttaccgtag 29169762  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | ||||||||||| |||||||  ||||  || ||||||||||| |||||| | |||||||||| |||||||| |||||||||||||| ||||||||||||    
T  29169763 gacagacagcccttaaagttgtgtcaagtaaggtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 29169862  T
Q  241 tggtttcct 249  Q
     ||||||||    
T  29169863 cggtttcct 29169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 249
Target Start/End: Original strand, 25375751 - 25375911
Alignment:
Q  89 ttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgaga 188  Q
    ||||||||  |||||| |||| | |||||||||||  | |||||||||||||| |||||| | | ||||||||| |||| ||||||| |||||||||| |    
T  25375751 ttgaccagggtttcactactcgtcggattaggggtcagagcttttacggtaggacagacaactccaaaagttgcgtcaagcaaagtgaccaaacatgaca 25375850  T
Q  189 aagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || |||||||| ||  ||||||||||||||||||||||| | ||||||||||||| |||||    
T  25375851 aaacatgttcttaccatcaacatgtttttataccatttgctattgacacttttggcttcct 25375911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 42920039 - 42919890
Alignment:
Q  98 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    ||||||| |||| |||||||| |||| || ||||||| | |||| || ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  42920039 atttcactactcgtgggattacgggtcggagcttttatgataggacaaacaaccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgtt 42919941  T
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 248  Q
    || ||| |||||||||||||||  ||| || |||||||||||||| |||||    
T  42919940 ctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttcc 42919890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 249
Target Start/End: Original strand, 45659498 - 45659726
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| |||| || |||||| ||||||| ||||||| ||||||| ||||||| ||  |||  |||||||||||  |  ||||||||||  ||||||||||     
T  45659498 atcaacactcaggcatgcacatgttatagtgtacagatgggtaggaggaaaacatgcatgcgtagacttgactggggtttcaccacttgtgggattaggt 45659597  T
Q  122 gttggggcttttacggtagggcagacagccct-aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttata 220  Q
     | ||| ||||||| ||||| ||  ||||||| ||||| ||| ||||  || ||||||||||| |||||||| |||||||||| |||||||| |||||||    
T  45659598 atcgggccttttaccgtaggacatgcagcccttaaaagctgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttata 45659697  T
Q  221 ccatttgtttttgacacttttggtttcct 249  Q
    ||||||| |||||||||||| | ||||||    
T  45659698 ccatttgcttttgacactttcgatttcct 45659726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 240
Target Start/End: Original strand, 31737281 - 31737392
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    ||||||||||| |  | || ||||||||||  || |||| |||||||||||||||||||||| ||| |||||||| |||||||| |||||||||||||||    
T  31737281 cttttacggtaagataaacggccctaaaagcggcgtcaagcaaagtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgt 31737380  T
Q  229 ttttgacacttt 240  Q
    ||||||||||||    
T  31737381 ttttgacacttt 31737392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 2764658 - 2764517
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| ||||||||||| ||||||| ||||||  || ||| |||||||||||  ||| ||||||||| ||||||||||||| | |||||    
T  2764658 tttcaccacttgtgggtttaggggttggtgcttttatggtaggataggcagtcctaaaagttgtgtcagacaaagtggtcaaacatgagaaaacgtgttc 2764559  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
     |||| |||||||| |||||| ||||||  ||||||||||||    
T  2764558 cgacaatcaacatgcttttatgccattttcttttgacacttt 2764517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 250
Target Start/End: Complemental strand, 37200217 - 37200011
Alignment:
Q  43 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 141  Q
    ||||||||| |||| |||||||||||||||| ||  ||| ||| ||||||||   | ||||||||||| |||||||| ||   || ||||||||  ||||    
T  37200217 atgttatggggtaccaatgggtaagaggaaaacatgcatgtgt-gacttgactgatgtttcaccactcgtgggattaaggaccggagcttttacaatagg 37200119  T
Q  142 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 241  Q
     ||  ||||| |||||||| | ||||  ||||||| ||||||| ||||||||||| || ||| |||| ||||||||||||||||||||||| ||||||||    
T  37200118 acatgcagccataaaagttacgtcaagtaaagtggtcaaacataagaaagcatgtgctaacaatcaatatgtttttataccatttgttttt-acactttt 37200020  T
Q  242 ggtttcctt 250  Q
    || ||||||    
T  37200019 ggcttcctt 37200011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 21473107 - 21473042
Alignment:
Q  174 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 239  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  21473107 tggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactt 21473042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 148 - 247
Target Start/End: Original strand, 20259774 - 20259873
Alignment:
Q  148 agccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 247  Q
    ||||||||||| | | |||| ||||||||  ||| |||||||||| |||||||||| |||||||||||||||||||||| || |||||||||| ||||||    
T  20259774 agccctaaaagctacgtcaagcaaagtggttaaaaatgagaaagcgtgttctgacaatcaacatgtttttataccatttattgttgacactttcggtttc 20259873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 249
Target Start/End: Original strand, 4861857 - 4862067
Alignment:
Q  40 cagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggt 138  Q
    |||||||||||||||||  ||||||| ||| ||| ||  ||| ||| || |||||  || ||||||||||  | |||||||||||   | | |||| |||    
T  4861857 cagatgttatggtgtacggatgggtaggagaaaaacatgcatgtgtggatttgactggtgtttcaccacttgttggattaggggtcttgacatttatggt 4861956  T
Q  139 agggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacact 238  Q
    ||| ||||||||| |||||||||| ||||  ||| ||| ||||||||||||||| | ||||||||  ||||||  |||||||| ||||| ||||||||||    
T  4861957 aggacagacagccttaaaagttgcgtcaagtaaaatggtcaaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacact 4862056  T
Q  239 tttggtttcct 249  Q
    || | ||||||    
T  4862057 ttcgatttcct 4862067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 22347022 - 22346924
Alignment:
Q  151 cctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||   |||| ||||||||||||| |||||||||| |||||||||| ||||||||  |||||||| |||| |||||||||||| ||||||||    
T  22347022 cctaaaagttatgtcaagcaaagtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttcct 22346924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 242
Target Start/End: Complemental strand, 16500187 - 16500070
Alignment:
Q  125 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 224  Q
    ||||||||||||||||| ||||||  |||||||||||| |||   |||||||||||| || ||||| |||||||| ||| | ||||||  ||||||| ||    
T  16500187 ggggcttttacggtaggacagacaatcctaaaagttgcgtcacgtaaagtggccaaatataagaaaacatgttctaacaattaacatgcctttatactat 16500088  T
Q  225 ttgtttttgacacttttg 242  Q
    ||| ||||||||||||||    
T  16500087 ttgcttttgacacttttg 16500070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 2898833 - 2898731
Alignment:
Q  150 ccctaaaagttgcatcaaacaaagtggccaaacatgagaa----agcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 245  Q
    ||||||||| |||||||| |||||||||||||||||||||    ||| |||||||||| |||| | |||||||||||||||| |||||| ||||| ||||    
T  2898833 ccctaaaagatgcatcaagcaaagtggccaaacatgagaaagtgagcgtgttctgacaatcaata-gtttttataccatttgcttttgatactttcggtt 2898735  T
Q  246 tcct 249  Q
    ||||    
T  2898734 tcct 2898731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 36487011 - 36486918
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    ||||| |||||||||  ||||||| |||| |||||||||| |||| ||||| |||| || ||||||||  ||||| ||||||||||||||||||    
T  36487011 taaaaattgcatcaagtaaagtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgcttttgacacttttggttt 36486918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 23044005 - 23043929
Alignment:
Q  150 ccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    |||| |||| |||||||| ||||||||||||| |||||||| || || || ||| |||||||| |||||||||||||    
T  23044005 ccctcaaagctgcatcaagcaaagtggccaaatatgagaaaacaagtactcacaatcaacatgcttttataccattt 23043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 37932146 - 37932264
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  ||||||||||||    ||||||||| ||| | |||||||||||||||||||  |||| |||| ||| |||| | |||||||  |||||    
T  37932146 tttcaccacttgtgggattaggggccaaggcttttacagtaagacagacagccctaaaagttgtgtcaagcaaaatggtcaaatacgagaaag-gtgttc 37932244  T
Q  199 tgacagtcaacatgttttta 218  Q
    ||||| ||||| ||||||||    
T  37932245 tgacaatcaacgtgttttta 37932264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 24177540 - 24177589
Alignment:
Q  200 gacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||| ||||||| |||||||||||||||||||||||| ||| ||||||||    
T  24177540 gacaatcaacatatttttataccatttgtttttgacagtttcggtttcct 24177589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 50314613 - 50314694
Alignment:
Q  160 tgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 241  Q
    ||||| || |||||||| ||||||||| ||| | |||||| ||| |||||||| |||||||||||||  |||||||| ||||    
T  50314613 tgcataaagcaaagtggtcaaacatgacaaaacttgttctcacaatcaacatgcttttataccatttacttttgacattttt 50314694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 35387643 - 35387710
Alignment:
Q  154 aaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    |||| ||||||||| |||||||||||||||||| ||||  |||||||||  |||||| | ||||||||    
T  35387643 aaaatttgcatcaagcaaagtggccaaacatgaaaaagtgtgttctgacgatcaacaagcttttatac 35387710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 7213341 - 7213279
Alignment:
Q  188 aaagcatgttctgacagtcaacatgttttt-ataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||||||| | | ||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  7213341 aaagcatgttctgataattaacatgttttttatatcatttatttttgacactttcggtttcct 7213279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 213
Target Start/End: Complemental strand, 19035458 - 19035424
Alignment:
Q  179 aaacatgagaaagcatgttctgacagtcaacatgt 213  Q
    ||||||||||||||||||||||||| |||||||||    
T  19035458 aaacatgagaaagcatgttctgacaatcaacatgt 19035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 47459753 - 47459711
Alignment:
Q  207 aacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||||||||||||| |||||| |||||||| |||||    
T  47459753 aacatgtttttataccatttgcttttgatacttttggcttcct 47459711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 38731607 - 38731566
Alignment:
Q  257 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 298  Q
    ||||||||||||||||||||| |||||||| ||||| |||||    
T  38731607 agttcaaagggtcatgcacaataatgtcatgactcctaggtc 38731566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 6e-40; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 249
Target Start/End: Original strand, 35739838 - 35740064
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| ||||||| ||||||||||||||||||||  |||||||| ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||||||| ||    
T  35739838 atcaacacttaggcatgcagatgttatggtgtatgaatgggtaggaggaaaacatgcatgtgtggacttgactggggtttcaccactagtgggattaagg 35739937  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
     | ||| ||||||||||||| |||||| ||||||||||||  | || ||||||||||||||||||||||||  ||||||||| |||||||||||||||||    
T  35739938 -tcgggccttttacggtaggacagacatccctaaaagttgtgttaagcaaagtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatac 35740036  T
Q  222 catttgtttttgacacttttggtttcct 249  Q
     ||| | ||||||||||||  |||||||    
T  35740037 aattagcttttgacactttcagtttcct 35740064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 101 - 240
Target Start/End: Complemental strand, 38815471 - 38815332
Alignment:
Q  101 tcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctg 200  Q
    ||||||||  ||||||||||||| |||||||||| |||||| ||||||||||||||||   |  |||||||||||||||||||||||||||| |||||||    
T  38815471 tcaccacttgtgggattaggggtcggggcttttatggtaggacagacagccctaaaagccacgccaaacaaagtggccaaacatgagaaagcgtgttctg 38815372  T
Q  201 acagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||| |||||||| |||||||||||||| ||||||||||||    
T  38815371 acaatcaacatgcttttataccatttgcttttgacacttt 38815332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 39434846 - 39434703
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| | ||||||||| ||||| |||  ||| ||||||||||| |||| |||||||||||||||||||||||| |||||    
T  39434846 tttcaccacttgtgggtttaggggtggaggcttttacagtaggacaggaagctctaaaagttgcgtcaagcaaagtggccaaacatgagaaagcgtgttc 39434747  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  39434746 tgacaatcaacatgcttttataccatttgtttttgacacttttg 39434703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 500406 - 500256
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||||||||| || ||| ||||||||||||| | |||||||||||||||||| |||| |||||||||||||||||||||| | |||||    
T  500406 tttcaccacttgtgggattaggtgtcgggccttttacggtaggaccgacagccctaaaagttgcgtcaagcaaagtggccaaacatgagaaaacgtgttc 500307  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| |||||||||||||  |||||||| ||| ||||||||    
T  500306 tgacaatcaacatgcttttataccatttacttttgacattttcggtttcct 500256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 27 - 249
Target Start/End: Original strand, 25021669 - 25021892
Alignment:
Q  27 tcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttg 125  Q
    |||||||| | |||||||||||||||||||  ||||||| ||||||| ||  ||| ||| ||||||||| |  ||||||||||  ||||||||||||| |    
T  25021669 tcacttaggcctgcagatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtggacttgaccggagtttcaccacttgtgggattaggggtcg 25021768  T
Q  126 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatt 225  Q
      | |||||| ||| | || ||||||||||||||||  |||| ||||||||  ||| |||||||||  |||||| ||| |||||||||||||||||||||    
T  25021769 atgtttttacagtatgacatacagccctaaaagttgtgtcaagcaaagtggtgaaatatgagaaagtgtgttctcacaatcaacatgtttttataccatt 25021868  T
Q  226 tgtttttgacacttttggtttcct 249  Q
    |  |||||||| |||||| |||||    
T  25021869 ttcttttgacatttttggcttcct 25021892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 3188148 - 3187998
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagcc-ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    ||||||||||  |||| |||||| | ||||||||||||||||| |||  |||| |||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  3188148 tttcaccacttgtgggtttaggg-tcggggcttttacggtaggacaggaagcctctaaaagttgcatcaagcaaagtggcaaaacatgaggaagcgtgtt 3188050  T
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||| |||||||| |||||||||||||| |||||| ||||| || |||||    
T  3188049 ctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttcct 3187998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 24125224 - 24125057
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  |  ||||||||||  |||||||| | || | | |||||||||| || ||  |||||||||||| |||||||| |||| ||||||||    
T  24125224 tgtagacttgactggggtttcaccacttgtgggattatgcgtcgtgccttttacggtgggacaagcagccctaaaagctgcatcaagcaaaatggccaaa 24125125  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||| || ||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||    
T  24125124 catgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcct 24125057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 129 - 249
Target Start/End: Complemental strand, 6592724 - 6592604
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    |||||||| ||||  |||||| | |||||| ||| |||| |||||||||||||||||||||||| |||||| ||| |||||||| ||||| ||||||||     
T  6592724 cttttacgataggatagacagtcgtaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgc 6592625  T
Q  229 ttttgacacttttggtttcct 249  Q
    ||||||||||||  |||||||    
T  6592624 ttttgacactttcagtttcct 6592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 243
Target Start/End: Complemental strand, 8620047 - 8619849
Alignment:
Q  40 cagatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggta 139  Q
    ||||||||||||||||| ||||||||||||||||     || |||  |||||||  |  ||||||||||  ||||||||| | | | | |||||||| ||    
T  8620047 cagatgttatggtgtacgaatgggtaagaggaaa-----atgtgtgaacttgactggggtttcaccacttgtgggattagagatcgtgacttttacgata 8619953  T
Q  140 gggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 239  Q
    |  |||||||||||||||||||| ||||  ||| ||| ||||||||| ||||| | || ||||| ||||| || ||||||||||||||||||| ||| ||    
T  8619952 gaacagacagccctaaaagttgcgtcaagtaaaatggtcaaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacattt 8619853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 10189707 - 10189572
Alignment:
Q  114 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 213  Q
    |||||||||||  |||||||| |||||| || |||  ||||||||||||  |||  ||||| | |||||| ||||||||||||||||||| |||||||||    
T  10189707 gattaggggttaaggcttttatggtaggacatacattcctaaaagttgcgccaattaaagtagtcaaacaagagaaagcatgttctgacaatcaacatgt 10189608  T
Q  214 ttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| ||||||  ||||||| |||||| |||||    
T  10189607 ttttatatcatttgcatttgacatttttggcttcct 10189572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 242
Target Start/End: Complemental strand, 4073685 - 4073571
Alignment:
Q  128 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 227  Q
    ||||||||||| |  |||||| ||||||||||||||||||||||||||| |||||| |||||| | |||| |  || |||||||| |||||||| |||||    
T  4073685 gcttttacggtggaacagacaaccctaaaagttgcatcaaacaaagtggtcaaacaagagaaaacgtgttttaccaatcaacatgattttatacaatttg 4073586  T
Q  228 tttttgacacttttg 242  Q
      |||||||||||||    
T  4073585 catttgacacttttg 4073571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 8882441 - 8882371
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 234  Q
    |||| |||||||||||||||||||||||| |||||||||| |||| ||| ||||| |||||||||||||||    
T  8882441 tcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttgtttttga 8882371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 28196324 - 28196228
Alignment:
Q  146 acagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||| |||||||  ||||||||  |||| ||| |||||||||||||  |||| ||| | | ||||||||||||||||||||||||||||||||||||    
T  28196324 acagtcctaaaaactgcatcaagtaaagcggctaaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttg 28196228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 37517243 - 37517163
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaac 209  Q
    ||||||| ||||| |||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||| |||| |||||    
T  37517243 cttttaccgtaggacagacagctctaaaagctgcatcaagcaaagtggccaaacatgagaaagggtgttccgacaatcaac 37517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 6618409 - 6618313
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||| ||||| | ||| |  |||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||||||||||||  |||||||    
T  6618409 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcct 6618313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 11611199 - 11611275
Alignment:
Q  126 gggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgac 202  Q
    ||||||||||| || |  ||||| ||||||||||||  ||||| |||||||||||| ||||||||||||||||||||    
T  11611199 gggcttttacgataagatagacatccctaaaagttgtgtcaaataaagtggccaaatatgagaaagcatgttctgac 11611275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 239
Target Start/End: Original strand, 10556283 - 10556361
Alignment:
Q  161 gcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactt 239  Q
    |||||||| ||||||| ||||||||||||| ||| |||||| | ||||||||||||||||  | |||| ||||||||||    
T  10556283 gcatcaaagaaagtggtcaaacatgagaaaacatattctgaaaatcaacatgtttttatataaattgtatttgacactt 10556361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 25021919 - 25021964
Alignment:
Q  253 acaaagttcaaagggtcatgcacaacaatgtcataactccaaggtc 298  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||    
T  25021919 acaaagttcaaagggtcatgcacaacaatgtcatatctcctaggtc 25021964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 292
Target Start/End: Original strand, 42922103 - 42922247
Alignment:
Q  147 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    ||||| |||||||||| ||||||||| ||| ||||  ||||||| | |||| ||||| |||| ||| ||||| | ||||||  |||||||||||||| ||    
T  42922103 cagccataaaagttgcgtcaaacaaaatggtcaaatttgagaaaacgtgttttgacaatcaaaatgcttttaaatcatttgcctttgacacttttggctt 42922202  T
Q  247 ccttctacaaagttcaaagggtcatgcacaacaatgtcataactcc 292  Q
    |||   | | |||| |||  || |||||||||||||||||||||||    
T  42922203 cctaacatagagtttaaa-agttatgcacaacaatgtcataactcc 42922247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 4700002 - 4699919
Alignment:
Q  144 agacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    ||||| |||| |||||||  |||| ||||||||||||||||||  |||| |||||| ||| | |||||||||||| |||||||||    
T  4700002 agacaaccctcaaagttgtgtcaagcaaagtggccaaacatga-taagcgtgttctcacaattaacatgtttttacaccatttgt 4699919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 211 - 250
Target Start/End: Complemental strand, 43824056 - 43824017
Alignment:
Q  211 tgtttttataccatttgtttttgacacttttggtttcctt 250  Q
    ||||||||||||||||| ||||||||||||||| ||||||    
T  43824056 tgtttttataccatttgcttttgacacttttggcttcctt 43824017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 39671170 - 39671232
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 232  Q
    |||||||||||||  |||||||| |||| ||||| | ||||||||||||||| |||| |||||    
T  39671170 aaagtggccaaaccagagaaagcgtgttttgacaattaacatgtttttatacaatttattttt 39671232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 8390291 - 8390234
Alignment:
Q  127 ggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacat 184  Q
    |||||||| | ||||||||||| |||||||| |||| | |||||||||| ||||||||    
T  8390291 ggcttttatgatagggcagacaaccctaaaaattgcgtaaaacaaagtgaccaaacat 8390234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 6e-40; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 28517215 - 28517358
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| ||||||||||| ||||| |||||| ||||||||| ||| |||| |||||||||||||||||||||||| ||||     
T  28517215 tttcaccacttgtgggtttaggggtgggggcttttacagtaggacagacaaccctaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttt 28517314  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
     |||| ||||||||||||||||||||||| ||||||||||||||    
T  28517315 agacaatcaacatgtttttataccatttgcttttgacacttttg 28517358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 4501495 - 4501296
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    |||||||||||||||  || |||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  |||||||||| || ||| ||||||| ||||    
T  4501495 gatgttatggtgtacggataggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtgggattaggtgtcgggccttttaccgtag 4501396  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | || ||| ||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| |||||||| |||||||  ||||| ||||||||||||    
T  4501395 gacaaacaaccctaaaagctgcgtcaaacaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt 4501296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 249
Target Start/End: Original strand, 21326766 - 21326916
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||||||||| || ||  ||||||| ||||| || |||||||||||||  || |||| |||||||||||||||||||||||| |||||    
T  21326766 tttcaccacttgtgggattaggtgtcggaccttttaccgtaggacaaacagccctaaaagccgcgtcaagcaaagtggccaaacatgagaaagcgtgttc 21326865  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| |||||||| |||||||||||||| |||||||||||| | ||||||    
T  21326866 tgacaatcaacatgcttttataccatttgcttttgacactttcgatttcct 21326916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 43857130 - 43856903
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| ||||||| | |||||||||||||||||||  ||||||| ||| ||| ||  |||  || ||||||||  |  ||||||||||  |||||||||||    
T  43857130 atcaacacttaggcctgcagatgttatggtgtacggatgggtaggagaaaaacatacatgcgtggacttgacgggggtttcaccacttgtgggattaggg 43857031  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    || ||||||||||| ||||| |||||| |  |||||| ||| |||| ||||||||| | |||||||||||| |||| ||||| ||||||||  |||||||    
T  43857030 gtcggggcttttacagtaggacagacaacattaaaagatgcgtcaatcaaagtggctagacatgagaaagcgtgttttgacaatcaacatgcgtttatac 43856931  T
Q  222 catttgtttttgacacttttggtttcct 249  Q
     ||||| |||||||| ||||||||||||    
T  43856930 aatttgcttttgacatttttggtttcct 43856903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 248
Target Start/End: Original strand, 45613712 - 45613919
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    ||||||||| ||||| |||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  | |||||||| || ||| ||||| | ||||    
T  45613712 gatgttatgatgtacgaatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccacttgtaggattaggtgtcgggcctttttccgtag 45613811  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | |||||| ||||||||||||| ||||  || ||| ||||||| | |||||  |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  45613812 gacagacaaccctaaaagttgcgtcaagtaaggtgaccaaacacgggaaagtgtgttctgacaatcaacatgtttttataccatttgattttgacacttt 45613911  T
Q  241 tggtttcc 248  Q
     |||||||    
T  45613912 cggtttcc 45613919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 32584768 - 32584630
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    ||||||||||||| |||| |||||||||||| ||  || |||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||| |    
T  32584768 tgggattaggggtcggggattttacggtaggacatgcaaccctaaaaattgcatcaaacaaagtggtcaaacatgagaaaacgtgttctgacaatcaaga 32584669  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || ||||| |||||||| ||||||||||||  |||||||    
T  32584668 tgcttttacaccatttgcttttgacactttatgtttcct 32584630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 246
Target Start/End: Complemental strand, 983145 - 982981
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    |||||||||||| ||  ||| ||||||  |||||||||| || ||  ||||||  ||||| ||| ||||| |||||| ||| |||| |||||||||||||    
T  983145 tgtagacttgactagggtttaaccacttgtgggattaggtgtgggaccttttattgtaggacaggcagccataaaagctgcgtcaagcaaagtggccaaa 983046  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    ||||||||| | |||||||||| |||||||| |||||||||||||| |||||| ||||| |||||    
T  983045 catgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatactttcggttt 982981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 240
Target Start/End: Complemental strand, 5825508 - 5825311
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    ||||||||||||||| |||||||  ||||||| ||  ||| ||| ||||||||  |  ||||||||||  |||| |||||||| | ||||||||||| ||    
T  5825508 gatgttatggtgtacgaatgggttggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggtttaggggtcgaggcttttacggcag 5825409  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | |||  ||||||||||| |||||||| |||||||  ||||||||| || || |||| ||||| ||||||||||||||||||||||  ||||||||||||    
T  5825408 gacaggaagccctaaaagctgcatcaagcaaagtg--caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacacttt 5825311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 19277434 - 19277322
Alignment:
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    ||||| ||| ||| |||||||| ||| |||| |||||| ||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||||||||    
T  19277434 gtaggacaggcagtcctaaaagctgcgtcaagcaaagtagccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaca 19277335  T
Q  237 cttttggtttcct 249  Q
    |||| ||||||||    
T  19277334 ctttcggtttcct 19277322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 27521651 - 27521500
Alignment:
Q  98 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    ||||||||| |  |||||||||| || ||| ||||||||||||| ||  || || |||||||||| | ||||||||||| ||||||||||||| | ||||    
T  27521651 atttcaccatttgtgggattaggtgtcgggccttttacggtaggacatgcacccttaaaagttgcgttaaacaaagtggtcaaacatgagaaaacgtgtt 27521552  T
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||| ||||||||  ||||||| ||||  |||||||||||||||||||||    
T  27521551 ctgacaatcaacatgcatttatacaatttacttttgacacttttggtttcct 27521500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 2904544 - 2904394
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  || | ||||||| || ||| |||||||||||  |||||| |||||||||| | |||| |||| | | |||||||||||||||||||||    
T  2904544 tttcaccacttgtgaggttaggggatgaggcatttacggtaggatagacagtcctaaaagttacgtcaagcaaaatagtcaaacatgagaaagcatgttc 2904445  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
     |||| |||||||| ||||||| ||||||||| |||||  ||||| |||||    
T  2904444 cgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttcct 2904394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 82 - 242
Target Start/End: Complemental strand, 3676836 - 3676675
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagac-agccctaaaagttgcatcaaacaaagtggccaa 180  Q
    ||||||||||||  |  ||||||||||  |||||||||| || ||  ||||||| ||||| ||| | ||||||||||| ||| |||| |||||||| |||    
T  3676836 tgtagacttgactggggtttcaccacttgtgggattaggtgtcggtccttttaccgtaggacaggccagccctaaaagctgcgtcaagcaaagtggtcaa 3676737  T
Q  181 acatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||| ||||||| |||||| ||  |||| ||| |||||||||||||| ||||||||||||||    
T  3676736 acatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgacacttttg 3676675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 30216040 - 30216136
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||| ||| |||| |||| ||| |||| |||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  30216040 taaaagctgcgtcaagcaaaatggtcaaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttcct 30216136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 22198150 - 22198015
Alignment:
Q  114 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 213  Q
    ||||||| || ||| |||||| |||||| |   ||||||||||||  || |||| ||||||| |||||||||||||||  |||||  ||| |||||||||    
T  22198150 gattaggtgtcgggccttttatggtaggacgcgcagccctaaaagcggcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgt 22198051  T
Q  214 ttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||||||| ||||| |||||| ||||||||    
T  22198050 ttttataccatttgcttttgtcactttcggtttcct 22198015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 22239671 - 22239806
Alignment:
Q  114 gattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgt 213  Q
    ||||||| || ||| |||||| |||||| |   ||||||||||||  || |||| ||||||| |||||||||||||||  |||||  ||| |||||||||    
T  22239671 gattaggtgtcgggccttttatggtaggacgcgcagccctaaaagcggcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgt 22239770  T
Q  214 ttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||||||| ||||| |||||| ||||||||    
T  22239771 ttttataccatttgcttttgtcactttcggtttcct 22239806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 24527756 - 24527618
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||||||| || ||  ||||||| ||||| ||| ||||||||||||  |  ||||  |||||||  |||||||||||| | |||||||||| ||||||    
T  24527756 tgggattaggtgtcggaccttttaccgtaggacaggcagccctaaaagcagtgtcaagtaaagtgggaaaacatgagaaaacgtgttctgacaatcaaca 24527657  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || |||||||||||||| ||||||||||||  |||||||    
T  24527656 tgcttttataccatttgcttttgacactttcagtttcct 24527618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 42295177 - 42295262
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||| |||| ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| | ||||| ||||||||    
T  42295177 tcaagcaaaatggccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttgttttttatactttcggtttcct 42295262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 10905246 - 10905151
Alignment:
Q  149 gccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 245  Q
    |||||||||| ||| |||| ||||||||||||| ||||||||   |||||||||| ||||||||  ||||||||||||| |||||||||||||||||    
T  10905246 gccctaaaagctgcgtcaagcaaagtggccaaatatgagaaaaagtgttctgacactcaacatg-ctttataccatttgcttttgacacttttggtt 10905151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 40726478 - 40726549
Alignment:
Q  169 caaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    |||||||||||||||| | |||   |||||||||| ||||||||||||||||||||||||||||||||||||    
T  40726478 caaagtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacacttt 40726549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 9281066 - 9281201
Alignment:
Q  105 cactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacag 204  Q
    ||||| |||||||| | | | ||| |||||| ||||| |||||| ||||||||| |||||||| |||| | || |||||||||||||| |||||| |||     
T  9281066 cactcgtgggattatgtgatagggtttttacagtaggacagacaaccctaaaagctgcatcaagcaaactagc-aaacatgagaaagcgtgttctaacaa 9281164  T
Q  205 tcaacatgtttttataccatttgtttttgacactttt 241  Q
    |||||||| |||||||| |||||  ||||||| ||||    
T  9281165 tcaacatgcttttatactatttggatttgacattttt 9281201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 241
Target Start/End: Original strand, 9292037 - 9292172
Alignment:
Q  105 cactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacag 204  Q
    ||||| |||||||| | | | ||| |||||| ||||| |||||| ||||||||| |||||||| |||| | || |||||||||||||| |||||| |||     
T  9292037 cactcgtgggattatgtgatagggtttttacagtaggacagacaaccctaaaagctgcatcaagcaaactagc-aaacatgagaaagcgtgttctaacaa 9292135  T
Q  205 tcaacatgtttttataccatttgtttttgacactttt 241  Q
    |||||||| |||||||| |||||  ||||||| ||||    
T  9292136 tcaacatgcttttatactatttggatttgacattttt 9292172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 111 - 199
Target Start/End: Original strand, 33202405 - 33202493
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttct 199  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||  ||||||| || ||| ||||||||||||||||||| || ||||||    
T  33202405 tgggattaggggttggggcttttacagtaggatagaaagccctggaagttgcgtccaactaagtggccaaacatgagaacgcgtgttct 33202493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 34067820 - 34067939
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    ||||||| || || |||||||||||  |||| || |||| | ||||| |||||||||||||||  |||| ||||| ||||||| ||| ||| ||||||||    
T  34067820 cttttactgtgggacagacagccctcgaagtcgcttcaagccaagtgaccaaacatgagaaagtgtgttttgacaatcaacat-tttctatgccatttgt 34067918  T
Q  229 ttttgacacttttggtttcct 249  Q
     ||||||||||||||||||||    
T  34067919 atttgacacttttggtttcct 34067939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 25186876 - 25186999
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||||||| || ||  ||||||| ||||| || | | ||||||||||||  ||||  ||||||| | ||||||||||||| ||||| || | ||||||    
T  25186876 tgggattaggtgtcggaccttttaccgtaggacataaaaccctaaaagttgtgtcaagtaaagtggtctaacatgagaaagcgtgttccgataatcaaca 25186975  T
Q  211 tgtttttataccatttgtttttga 234  Q
    ||||||| ||||||||| ||||||    
T  25186976 tgtttttctaccatttgcttttga 25186999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 34772946 - 34772819
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||||| | ||||||  |||||||||| |  || |||| ||||||||||  |||| |||||| |||||| |||||||||  ||||| |||| | || |    
T  34772946 tgggattatgtgttgggctttttacggtatgataggcagctctaaaagttg--tcaatcaaagtagccaaatatgagaaagtgtgttcggacaattaata 34772849  T
Q  211 tgtttttataccatttgtttttgacacttt 240  Q
    ||||||||||||||||| |||||| |||||    
T  34772848 tgtttttataccatttgcttttgaaacttt 34772819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 1249735 - 1249667
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    |||||||||||||  ||||||||||||||  ||| ||||| ||||||| ||||||||||||||| ||||    
T  1249735 cttttacggtaggatagacagccctaaaacctgcgtcaaataaagtggtcaaacatgagaaagcgtgtt 1249667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 41 - 242
Target Start/End: Complemental strand, 38839564 - 38839360
Alignment:
Q  41 agatgttatggtgtacaaatgggtaagaggaaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    ||||||||||||||||  ||| ||||||| |||||  ||| ||| ||||||||    |||||| || |  ||||||| ||||| | | ||||||||| ||    
T  38839564 agatgttatggtgtacggatgtgtaagagaaaacatgcatgtgtggacttgactgagatttcatcattg-tgggatttggggtcgtgtcttttacggaag 38839466  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaa----catgtttttataccatttgtttttgaca 236  Q
      |||||| | ||||||||||| | ||| ||| | | |||||||||||||||||||| || || ||||    ||||||||||||  ||||| ||||||||    
T  38839465 aacagacaactctaaaagttgcgtaaaataaaatcgtcaaacatgagaaagcatgttatgtcaatcaacatgcatgtttttatataatttgcttttgaca 38839366  T
Q  237 cttttg 242  Q
    ||||||    
T  38839365 cttttg 38839360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 43856872 - 43856831
Alignment:
Q  257 agttcaaagggtcatgcacaacaatgtcataactccaaggtc 298  Q
    |||||||||||||||||||||||||||||| ||||| |||||    
T  43856872 agttcaaagggtcatgcacaacaatgtcatgactcctaggtc 43856831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Complemental strand, 43383283 - 43383211
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    ||||| ||||||||||| |||||||||||||||||   || |||||||| |||||| |||||| | |||||||    
T  43383283 tcaaataaagtggccaaccatgagaaagcatgttccagcaatcaacatgcttttatgccatttatgtttgaca 43383211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 48539261 - 48539213
Alignment:
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    |||||| |||||||| |||||||||||||| |||||||||||| |||||    
T  48539261 ctgacaatcaacatgcttttataccatttgcttttgacactttcggttt 48539213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 82 - 247
Target Start/End: Complemental strand, 44198963 - 44198798
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  |  ||||||||||  |||||||||| || ||  ||||||| ||||| ||| |||| ||||||||||| |||| |||||||||||||    
T  44198963 tgtagacttgactggggtttcaccacttgtgggattaggtgtcggaccttttaccgtaggtcaggcagctctaaaagttgcgtcaagcaaagtggccaaa 44198864  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttc 247  Q
    ||||||||||| |||||||| | |||||||| |||||||||||||| |||||||||||| ||||||    
T  44198863 catgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttc 44198798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 106 - 242
Target Start/End: Original strand, 46940705 - 46940841
Alignment:
Q  106 actcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagt 205  Q
    |||| ||||||||||||| | || ||||| |||||| |||||| | ||||||| ||| |||| |||||||||||||||| ||||| ||||||| |||| |    
T  46940705 actcgtgggattaggggtcgaggattttatggtaggacagacaactctaaaagatgcgtcaagcaaagtggccaaacattagaaaacatgttccgacaat 46940804  T
Q  206 caacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||||| |||||||||||||||||||||||||||||    
T  46940805 caacatgcttttataccatttgtttttgacacttttg 46940841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 43 - 249
Target Start/End: Complemental strand, 7901094 - 7900887
Alignment:
Q  43 atgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagg 141  Q
    ||||||||||||| | ||| ||| ||||||| ||  ||| ||| ||||||||  |  ||||||||||  ||||||||||||||||| |||||||||||||    
T  7901094 atgttatggtgtatagatgtgtaggaggaaaacatgcatgtgtggacttgactggggtttcaccacttgtgggattaggggttgggtcttttacggtagg 7900995  T
Q  142 gcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacactttt 241  Q
     | || | ||||||||  ||| |||| |||| | ||| ||||||||||||| | |||||||| |||||||| |||||||||||||||||||||||||||     
T  7900994 acggatatccctaaaaactgcgtcaagcaaaatagccgaacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttc 7900895  T
Q  242 ggtttcct 249  Q
    || |||||    
T  7900894 ggcttcct 7900887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 53785965 - 53785738
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| |||| || ||||| |||||| ||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  ||||||||||  ||||||||||     
T  53785965 atcaacactcaggcatgcggatgttttggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcaccactagtgggattaggt 53785866  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    || ||| ||||||| |||||  || ||||||| ||||  || ||||  || ||||||||||| |||||||| |||||||||| |||||||| ||||||||    
T  53785865 gtcgggccttttaccgtaggataggcagcccttaaagccgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttatac 53785766  T
Q  222 catttgtttttgacacttttggtttcct 249  Q
    |||||| |||||||||||| ||||||||    
T  53785765 catttgcttttgacactttcggtttcct 53785738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 249
Target Start/End: Original strand, 39583169 - 39583307
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||||| |||| ||| | |||| ||||||  || |||||||||||| ||| |||| |||||||||||||||||||||||| |||||||||| ||||||    
T  39583169 tgggattaagggtcgggccatttatggtaggataggcagccctaaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaaca 39583268  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || ||||||| |||||||||| |||||||| ||||||||    
T  39583269 tgcttttatatcatttgttttcgacactttcggtttcct 39583307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 36 - 249
Target Start/End: Complemental strand, 49018206 - 49017992
Alignment:
Q  36 catgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggctttta 134  Q
    |||||||||||||||||||||  || |||| ||||||| ||  ||| |||| |||||||  |  ||||||||||  ||| |||||| || | | ||||||    
T  49018206 catgcagatgttatggtgtacggattggtacgaggaaaacatgcatgtgtaaacttgactggagtttcaccacttgtggaattaggtgtcgagcctttta 49018107  T
Q  135 cggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 234  Q
    ||||||| ||  || |||| |||||| | | |||||||||| |||||||||||||||  |||||| ||| |||||||||||||||||||||| ||||| |    
T  49018106 cggtaggacaagcaaccctgaaagttacgtaaaacaaagtgaccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccatttttttttta 49018007  T
Q  235 cacttttggtttcct 249  Q
    |||||| ||||||||    
T  49018006 cactttcggtttcct 49017992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 143 - 247
Target Start/End: Original strand, 37132971 - 37133075
Alignment:
Q  143 cagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||||||||||||||| | | |||| ||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||| |    
T  37132971 cagacagccctaaaagctacgtcaagcaaagtggttaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgttttttacactttcg 37133070  T
Q  243 gtttc 247  Q
    |||||    
T  37133071 gtttc 37133075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 99 - 249
Target Start/End: Original strand, 52741439 - 52741590
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaa-gttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    ||||||||||  |||||||||  || ||  ||||||  ||||| ||| ||||||||||| | ||  ||||||||| || |||||||||||||||| ||||    
T  52741439 tttcaccacttgtgggattagatgtaggaccttttattgtaggacaggcagccctaaaaagctgagtcaaacaaattgaccaaacatgagaaagcgtgtt 52741538  T
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  52741539 ctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcct 52741590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 249
Target Start/End: Complemental strand, 26772911 - 26772787
Alignment:
Q  125 ggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccat 224  Q
    ||||| ||||| ||||| ||  || ||||||||||||  |||| |||||||||||||||| ||||| | |||||||||| |||||||| |||||||||||    
T  26772911 ggggcatttacagtaggacatgcatccctaaaagttgtgtcaagcaaagtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccat 26772812  T
Q  225 ttgtttttgacacttttggtttcct 249  Q
    ||| ||||||||||||||| |||||    
T  26772811 ttgcttttgacacttttggcttcct 26772787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 115 - 249
Target Start/End: Complemental strand, 4473224 - 4473090
Alignment:
Q  115 attaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtt 214  Q
    ||||| |||||||| |||||||||||| |||| |||| ||||| |||| |||| ||||||| | |||||||| ||||| |||||| ||  |||| |||||    
T  4473224 attagtggttggggtttttacggtaggacagagagccttaaaaattgcgtcaagcaaagtgtcaaaacatgaaaaagcgtgttctaaccatcaatatgtt 4473125  T
Q  215 tttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| |||||||||||||||||| || |||||    
T  4473124 tttatactatttgtttttgacactttcggcttcct 4473090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 13582705 - 13582539
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    |||||||||||||    ||||| ||||  |||||||||| ||  || ||||||| ||||| ||  |||||||||||| ||| |||| |||||||  ||||    
T  13582705 tgtagacttgaccgaggtttcaacacttgtgggattaggtgtcaggccttttaccgtaggacaagcagccctaaaagctgcgtcaatcaaagtgatcaaa 13582606  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||| ||||||  |||||||||| ||||| |||||||||||||||||||||| ||||||||| ||||||    
T  13582605 cataagaaagtgtgttctgacaatcaacgtgtttttataccatttgttttt-acacttttgatttcct 13582539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 37992511 - 37992384
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||| |||||||| |||||| ||| | |  |||||||||||| || | ||||||  ||||||  |||||||||||| ||||||||||| ||||||||||    
T  37992511 tttcatcactcatgagattagaggtcgagatttttacggtaggacatatagccctgcaagttgtgtcaaacaaagtgaccaaacatgaggaagcatgttc 37992412  T
Q  199 tgacagtcaacatgtttttataccattt 226  Q
    ||||| |||||||| ||||||| |||||    
T  37992411 tgacaatcaacatgattttatatcattt 37992384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 249
Target Start/End: Complemental strand, 5338796 - 5338672
Alignment:
Q  128 gcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt---ctgacagtcaacatgtttttataccat 224  Q
    |||||||||||||| |||| |||||||| |||||| ||||||||| | ||||||||||||||||   |||    |||||||||||||| |||||||| ||    
T  5338796 gcttttacggtaggacagaaagccctaagagttgcgtcaaacaaaattgccaaacatgagaaagtgcgttgcgttgacagtcaacatgcttttatacaat 5338697  T
Q  225 ttgtttttgacacttttggtttcct 249  Q
    ||| |||||||||||| || |||||    
T  5338696 ttgcttttgacactttcggcttcct 5338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 38670887 - 38670952
Alignment:
Q  178 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttgg 243  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| |||||||||||||||||||||    
T  38670887 caaacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttgg 38670952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 242
Target Start/End: Complemental strand, 38146223 - 38146092
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    ||||||||||||| || ||||| | |||||| ||  ||||||||||||  ||||||| |||||||| |||||  |||| | | |||| ||||| ||||||    
T  38146223 tgggattaggggtcggagctttgagggtaggacatgcagccctaaaagcggcatcaatcaaagtggtcaaacgcgagacaacgtgttttgacaatcaaca 38146124  T
Q  211 tgtttttataccatttgtttttgacacttttg 242  Q
    ||||||||||||||||   |||||||||||||    
T  38146123 tgtttttataccatttacatttgacacttttg 38146092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 32546901 - 32546824
Alignment:
Q  172 agtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||||||||||||| ||||| |||| |||||||  |||||||||||||| ||||||||||||  |||||||    
T  32546901 agtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacactttcagtttcct 32546824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 3443270 - 3443390
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    |||||||| |||| |||| || |||||||||||| |||| |||| ||||||||||||| ||||  | |||| ||| |||||||| |||||||||||||      
T  3443270 cttttacgataggacagagagtcctaaaagttgcgtcaagcaaaatggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattttc 3443369  T
Q  229 ttttgacacttttggtttcct 249  Q
    | ||||||||||  |||||||    
T  3443370 tgttgacactttcagtttcct 3443390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 38978757 - 38978877
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    |||||||||||||  | ||| ||||||||||||  |||| |||| |||  | ||||| |||| | | || ||||| |||| |||||||||||| ||||||    
T  38978757 cttttacggtaggaaatacaaccctaaaagttgtgtcaagcaaattggttagacatgtgaaaacgtattttgacaatcaatatgtttttatactatttgt 38978856  T
Q  229 ttttgacacttttggtttcct 249  Q
    |||||||||||||||||||||    
T  38978857 ttttgacacttttggtttcct 38978877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 7502010 - 7502090
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatg-tttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||| ||||||||||||||| |||||  ||| |||||||| ||||||||||||||  |||||||| ||||||||||||    
T  7502010 aaagtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttcct 7502090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 54508367 - 54508455
Alignment:
Q  155 aaagttgcatcaaacaaagtggccaaacatgagaaag-catgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||||||| ||||||||| |||| ||||||||||||  | |||||||||| | |||||||||||||| |||||| |||||||| |||||    
T  54508367 aaagttgcgtcaaacaaaatggctaaacatgagaaaaacttgttctgacaattaacatgtttttatatcatttgcttttgacatttttg 54508455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 51234716 - 51234654
Alignment:
Q  178 caaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||||||| |||||||||| |||||  ||||||| ||||||||||||| |||||||||||||    
T  51234716 caaacatgaaaaagcatgttatgacaaccaacatgcttttataccatttatttttgacacttt 51234654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 226
Target Start/End: Complemental strand, 43123268 - 43123197
Alignment:
Q  155 aaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccattt 226  Q
    ||||| ||||||| ||||||| | |||||||| |||| ||||||||||| |||||||||| |||||| ||||    
T  43123268 aaagtcgcatcaagcaaagtgtctaaacatgataaaggatgttctgacaatcaacatgttgttatactattt 43123197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 52411903 - 52411960
Alignment:
Q  183 atgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    |||||| ||| |||||||||| |||||||| |||||| ||||||| ||||||||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacacttt 52411960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 291
Target Start/End: Original strand, 7502109 - 7502153
Alignment:
Q  247 ccttctacaaagttcaaagggtcatgcacaacaatgtcataactc 291  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||    
T  7502109 ccttctacagagtttaaagggtcatgcacaacaatgtcatgactc 7502153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 29862048 - 29862003
Alignment:
Q  28 cacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa 73  Q
    ||||||| |||||||||||||||||||||  ||||||| |||||||    
T  29862048 cacttaggcatgcagatgttatggtgtacggatgggtaggaggaaa 29862003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 242
Target Start/End: Original strand, 35484691 - 35484763
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||||| |||||||||||||  ||||||  ||| ||||||||||||| ||| |||||  |||||||| ||||    
T  35484691 aaagtggtcaaacatgagaaaatatgttccaacaatcaacatgtttttgtactatttgcatttgacacgtttg 35484763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 82 - 249
Target Start/End: Complemental strand, 6529 - 6363
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  |  ||||||||||  ||||||||||| | ||  ||||||| ||||| |||||||||||||||||||| ||||  ||||||||||||    
T  6529 tgtagacttgactggggtttcaccacttgtgggattaggg-tcggaccttttaccgtaggacagacagccctaaaagttgcgtcaagtaaagtggccaaa 6431  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||| |||||||||| |||||||| || ||||||||||| ||||||||||||  |||||||    
T  6430 catgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcct 6363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 33428 - 33279
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    |||||||||| ||||||||||| || ||| ||||||||||||| ||| || || |||| || ||||||| ||||||||| |||||||||||||| |||||    
T  33428 tttcaccacttatgggattaggtgtcgggccttttacggtaggacaggcaaccttaaa-gtggcatcaagcaaagtggctaaacatgagaaagcgtgttc 33330  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||| ||||||||||||||||||||||  |||||||| ||| ||||||||    
T  33329 tgacaatcaacatgtttttataccatttacttttgacattttcggtttcct 33279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 239
Target Start/End: Original strand, 23484802 - 23485006
Alignment:
Q  36 catgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggctttta 134  Q
    |||||| |||||||| |||||  ||||||| ||||||| ||  ||| |||||||||||   |  ||||||||||  |||||||| | || ||| |||| |    
T  23484802 catgcatatgttatgatgtacggatgggtaggaggaaaacatgcatgtgtagacttgattggggtttcaccacttgtgggattaagtgtcgggcctttaa 23484901  T
Q  135 cggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttga 234  Q
    |||| || ||   ||||||||||| | | |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23484902 cggtgggacaactagccctaaaagctacgtcaaacaaagtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttgtttttga 23485001  T
Q  235 cactt 239  Q
    |||||    
T  23485002 cactt 23485006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 249
Target Start/End: Original strand, 41867778 - 41867986
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    |||||||||||||||| ||||||| | ||||| ||  | | ||||||||||||    ||||||| |||  |||||||||| || ||  ||||||  ||||    
T  41867778 gatgttatggtgtacagatgggtaggtggaaaacatgcttgtgtagacttgactgagatttcacgacttgtgggattaggtgtcggaccttttatcgtag 41867877  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | ||| ||||| |||||| ||| |||| |||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||    
T  41867878 gacaggcagccttaaaagctgcgtcaagcaaagtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacacttt 41867977  T
Q  241 tggtttcct 249  Q
     || |||||    
T  41867978 cgggttcct 41867986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 38 - 249
Target Start/End: Complemental strand, 2888753 - 2888545
Alignment:
Q  38 tgcagatgttatggtgtacaaatgggtaagagg-aaacactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacg 136  Q
    ||||||||||||||| |||| |||||||||||| |||||  ||| ||| ||||| ||  | ||||| ||||| || ||||||||||| ||     ||| |    
T  2888753 tgcagatgttatggtatacatatgggtaagaggtaaacatgcatgtgtggacttaactggaatttcgccacttataggattaggggtcgga----ttatg 2888658  T
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    |||| ||| ||| ||||||||||||| || | |||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||| |||| |||||    
T  2888657 gtagtgcaaacaaccctaaaagttgcgtctagcaaagtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgaca 2888558  T
Q  237 cttttggtttcct 249  Q
    ||||||| |||||    
T  2888557 cttttggcttcct 2888545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 5532598 - 5532457
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||||| ||||||||||| |||| |||||||||||| ||  |||||||||||| ||| |||| |||||||| ||||||||||||| | ||||     
T  5532598 tttcaccactcataggattaggggtcggggattttacggtaggacatgcagccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttg 5532499  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    ||||| |||||||| |||||||| ||||  ||||||||||||    
T  5532498 tgacaatcaacatgcttttatactatttacttttgacacttt 5532457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 4413024 - 4413144
Alignment:
Q  129 cttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgt 228  Q
    ||||||| ||||| ||| || ||||||||| ||  |||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||     
T  4413024 cttttaccgtaggacaggcaaccctaaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgc 4413123  T
Q  229 ttttgacacttttggtttcct 249  Q
    |||||||||||| ||||||||    
T  4413124 ttttgacactttcggtttcct 4413144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 82 - 242
Target Start/End: Original strand, 9685326 - 9685486
Alignment:
Q  82 tgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaa 181  Q
    ||||||||||||  |  ||||||||||  |||||||||| ||  |  ||||||| |||||  || |||||||||||   || |||| |||||||||||||    
T  9685326 tgtagacttgactggggtttcaccacttgtgggattaggtgtcagaccttttaccgtaggataggcagccctaaaatccgcgtcaagcaaagtggccaaa 9685425  T
Q  182 catgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    ||||| ||||| |||||||||| |||||||| |||||||||||||| ||||||||||||||    
T  9685426 catgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttg 9685486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 19161634 - 19161858
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| |||| || ||||| ||||||||| ||||   ||||||| ||||||| ||  ||| |||||||||||  ||  ||||||||||  || ||||||      
T  19161634 atcaacactcaggcatgcggatgttatgatgtaaggatgggtaggaggaaaacatgcatgtgtagacttgaatagggtttcaccacttgtgagattagat 19161733  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    ||  || |||||| |||||| || ||| ||||||||  ||| ||||  ||||||| ||||||||| ||||| |||||||||| |||||||||||||||||    
T  19161734 gtcaggccttttatggtaggacatacatccctaaaatctgcgtcaagaaaagtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttatac 19161833  T
Q  222 catttgtttttgacacttttggttt 246  Q
    |||||| |||||||||||| |||||    
T  19161834 catttgcttttgacactttcggttt 19161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 28225167 - 28225029
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||| ||||| ||| |||||||||||||||| || ||| |  |||||| ||| |||| ||||||| ||||| |||||||||| | |||||||| ||||||    
T  28225167 tgggcttaggagttagggcttttacggtaggacaaacaactttaaaagctgcgtcaagcaaagtgaccaaatatgagaaagcgtattctgacaatcaaca 28225068  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || |||||||||||||| |||||||||||| || |||||    
T  28225067 tgcttttataccatttgcttttgacactttcggcttcct 28225029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 208
Target Start/End: Complemental strand, 44686598 - 44686490
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| |||||||| |||||||||||| |||| ||||||| |||||||| ||  |||| ||| |||||||||||||||||||| |||||    
T  44686598 tttcaccacttgtgggtttaggggtcggggcttttacgataggacagacagtcctaaaagctg-gtcaagcaatgtggccaaacatgagaaagcgtgttc 44686500  T
Q  199 tgacagtcaa 208  Q
    ||||| ||||    
T  44686499 tgacaatcaa 44686490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 17344894 - 17344667
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| |||| || ||||| |||||||||||||||  ||||||| ||||||| ||  ||| ||||||||||||  |  |||||| |||  ||||||||||     
T  17344894 atcaacactcaggcatgcggatgttatggtgtacggatgggtaggaggaaaacatgcatgtgtagacttgactggggtttcacaacttgtgggattaggt 17344795  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    ||  |  ||||||| |||||  || ||| ||| |||| ||| ||||  || ||||||||||| |||||| | |||| | ||| |||||||| ||||||||    
T  17344794 gtcagaccttttaccgtaggaaagccagtccttaaagctgcgtcaagtaaggtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttatac 17344695  T
Q  222 catttgtttttgacacttttggtttcct 249  Q
    |||||| ||||||||||||  |||||||    
T  17344694 catttgcttttgacactttcagtttcct 17344667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 1296031 - 1296111
Alignment:
Q  152 ctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgttttt 232  Q
    ||||||| ||| ||||||||| |||||||||||||||||  ||||||||||| | |||||||||||||||| ||| |||||    
T  1296031 ctaaaagctgcgtcaaacaaaatggccaaacatgagaaaatatgttctgacaataaacatgtttttatacctttttttttt 1296111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 246
Target Start/End: Original strand, 13147096 - 13147175
Alignment:
Q  170 aaagtggccaaacatgagaaagcatgttctgacagtcaacatgt---ttttataccatttgtttttgacacttttggttt 246  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||| |   |||||||||||||| ||||||||||||||||||    
T  13147096 aaagtggtcaaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttt 13147175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 27502540 - 27502400
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||  |||| ||||||||  | ||||||||| |||| || | | ||||||||| ||| |||| |||||||| ||||||||||||| | |||||    
T  27502540 tttcaccacttgtgggtttaggggtcagagcttttacgataggaca-ataaccctaaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttc 27502442  T
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
     ||||  ||||||| |||||||| |||  |||||||||||||    
T  27502441 cgacaaacaacatgcttttatacaattgctttttgacacttt 27502400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 164 - 245
Target Start/End: Original strand, 34814812 - 34814893
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtt 245  Q
    ||||| ||||||  ||||||||||||||| |||||||||| |||| ||| |||||||||||||| ||| |||||||| ||||    
T  34814812 tcaaataaagtgatcaaacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctttcgacactttcggtt 34814893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 236
Target Start/End: Original strand, 18744956 - 18745019
Alignment:
Q  173 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgaca 236  Q
    ||||||||||| |||||||| |||||||||| |||||||  |||||||||||||| ||||||||    
T  18744956 gtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgcttttgaca 18745019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 111 - 240
Target Start/End: Complemental strand, 3825894 - 3825764
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt-ctgacagtcaac 209  Q
    |||||||||||||  || ||||||||||| | |||| ||||||||||| ||| |||| |||||||| ||||||||| ||||  | || |||||| || ||    
T  3825894 tgggattaggggtcaggacttttacggtatgacagagagccctaaaagctgcgtcaagcaaagtggtcaaacatgaaaaagttttttcctgacaatctac 3825795  T
Q  210 atgtttttataccatttgtttttgacacttt 240  Q
    ||||||||||  |||||| ||  ||||||||    
T  3825794 atgtttttatttcatttgcttcagacacttt 3825764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 33612555 - 33612625
Alignment:
Q  179 aaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||||| | |||| ||||| |||||||| |||||||| |||||| |||||||||||||| |||||    
T  33612555 aaacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcct 33612625  T

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Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 248
Target Start/End: Original strand, 2886638 - 2886692
Alignment:
Q  194 tgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 248  Q
    |||||||||| |||||||||||||||| ||||||||||||| | ||| |||||||    
T  2886638 tgttctgacaatcaacatgtttttatatcatttgtttttgatattttcggtttcc 2886692  T

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Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 242
Target Start/End: Complemental strand, 5679392 - 5679314
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttg 242  Q
    |||| |||||||||||||||||||||| ||||||  || | |||||||  ||| ||||||||| | |||||||||||||    
T  5679392 tcaagcaaagtggccaaacatgagaaaacatgttaagataatcaacatcctttcataccatttatgtttgacacttttg 5679314  T

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Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 246
Target Start/End: Original strand, 20142753 - 20142800
Alignment:
Q  199 tgacagtcaacatgtttttataccatttgtttttgacacttttggttt 246  Q
    ||||| |||||||| |||||||||||||  ||||||||||||||||||    
T  20142753 tgacaatcaacatgcttttataccattttcttttgacacttttggttt 20142800  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 9675023 - 9674946
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtgg 176  Q
    ||||||||||||||||||||||| |  |  |||||| |||||| || | ||||||||||  ||| |||||||||||||    
T  9675023 tttcaccactcatgggattagggatcagaccttttatggtaggacaaatagccctaaaatatgcgtcaaacaaagtgg 9674946  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 44720427 - 44720374
Alignment:
Q  174 tggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttg 227  Q
    ||||||||||||| ||| | |||| ||||| |||||||||||||||||| ||||    
T  44720427 tggccaaacatgaaaaaacgtgttatgacaatcaacatgtttttataccgtttg 44720374  T

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Target: scaffold0224 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 98 - 248
Target Start/End: Original strand, 18292 - 18441
Alignment:
Q  98 atttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgtt 197  Q
    ||||||| |||| |||||||| |||| || ||||||| | |||| || ||| |||||||||||||||||||||||| |||||||||||||||| | ||||    
T  18292 atttcactactcgtgggattacgggtcggagcttttatgataggacaaacaaccctaaaagttgcatcaaacaaagcggccaaacatgagaaa-cgtgtt 18390  T
Q  198 ctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcc 248  Q
    || ||| |||||||||||||||  ||| || |||||||||||||| |||||    
T  18391 ctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttcc 18441  T

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Target: scaffold0186 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 249
Target Start/End: Complemental strand, 10543 - 10389
Alignment:
Q  99 tttcaccactcatgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttc 198  Q
    ||||||||||| ||||||||||||||||||||||||| || || ||  |||||||||||||||| ||||  ||| ||||||||||||| || || |||||    
T  10543 tttcaccactcgtgggattaggggttggggcttttacagttggacaagcagccctaaaagttgcgtcaagtaaaatggccaaacatgataatgcgtgttc 10444  T
Q  199 tga----cagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||    || |||||||| |||||||||||||| ||||||||||| ||| |||||    
T  10443 tgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcct 10389  T

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Target: scaffold1768 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 42 - 246
Target Start/End: Original strand, 54 - 259
Alignment:
Q  42 gatgttatggtgtacaaatgggtaagaggaaa-cactcatttgtagacttgaccagtatttcaccactcatgggattaggggttggggcttttacggtag 140  Q
    ||||||||| |||||  ||||||| ||||||| ||  ||| | ||||||||||  |  ||||||||||  |||||||| | || ||| ||||||| ||||    
T  54 gatgttatgatgtacggatgggtaggaggaaaacatgcatgtatagacttgactggggtttcaccacttgtgggattaagtgtcgggccttttactgtag 153  T
Q  141 ggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    | ||| |||||||||||  ||| |||| |||||||||||||||||||| ||   ||| ||||  |||||||| ||||||||||||||| |||||||||||    
T  154 gacaggcagccctaaaaactgcgtcaagcaaagtggccaaacatgagacagtgggttatgaccatcaacatgcttttataccatttgtgtttgacacttt 253  T
Q  241 tggttt 246  Q
    ||||||    
T  254 tggttt 259  T

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Target: scaffold0110 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 249
Target Start/End: Original strand, 47390 - 47617
Alignment:
Q  23 atcatcacttagtcatgcagatgttatggtgtacaaatgggtaagaggaaacact-catttgtagacttgaccagtatttcaccactcatgggattaggg 121  Q
    |||| |||||||  ||||| ||||||||||||||||||| ||| ||| ||| | | ||  ||| |||||||   |  ||||||||||  |||||||||||    
T  47390 atcaacacttagggatgcaaatgttatggtgtacaaatgagtatgagaaaaaaatgcaagtgtggacttgattggggtttcaccacttgtgggattaggg 47489  T
Q  122 gttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
     ||| | ||||||||||||| || | |  |||||||||||| ||||  ||| |||||||||||||||||   |||||||||||| ||||| |||||||||    
T  47490 attgagacttttacggtaggacaaataaacctaaaagttgcgtcaagtaaaatggccaaacatgagaaaatgtgttctgacagttaacatatttttatac 47589  T
Q  222 catttgtttttgacacttttggtttcct 249  Q
    |||||| |||| ||||||| | ||||||    
T  47590 catttgcttttaacactttcgatttcct 47617  T

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Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 240
Target Start/End: Complemental strand, 49542 - 49449
Alignment:
Q  147 cagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 240  Q
    |||||||||||||||||||||||||||||| ||||  ||||||| | |||||||||| ||||| || |||||||||||||| ||||||||||||    
T  49542 cagccctaaaagttgcatcaaacaaagtggtcaaatgtgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacacttt 49449  T

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Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 249
Target Start/End: Complemental strand, 103272 - 103135
Alignment:
Q  111 tgggattaggggttggggcttttacggtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaaca 210  Q
    |||||| ||| || ||| ||||||| ||||| ||| ||||||| |||| ||| ||||  ||  |||||||||| |||||||| ||| |||||| ||||||    
T  103272 tgggataaggtgtcgggccttttaccgtaggacaggcagccctcaaagctgcgtcaagtaagatggccaaacacgagaaagcgtgt-ctgacaatcaaca 103174  T
Q  211 tgtttttataccatttgtttttgacacttttggtttcct 249  Q
    || |||||||||||||| |||||||||||| ||||||||    
T  103173 tgcttttataccatttgcttttgacactttcggtttcct 103135  T

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Target: scaffold0493 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 8525 - 8594
Alignment:
Q  180 aacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||  ||| ||||||||||||||||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttcct 8594  T

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Target: scaffold0119 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 137 - 221
Target Start/End: Complemental strand, 16275 - 16191
Alignment:
Q  137 gtagggcagacagccctaaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttatac 221  Q
    ||||| |||||| | ||||||| ||| ||||||||| ||||||||||||||||| |||||||||||| | |||||||||||||||    
T  16275 gtaggacagacaacgctaaaagctgcgtcaaacaaaatggccaaacatgagaaaacatgttctgacaataaacatgtttttatac 16191  T

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Target: scaffold0470 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 7727 - 7631
Alignment:
Q  153 taaaagttgcatcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggtttcct 249  Q
    |||||||||| ||||| | ||| |  |||||||||||||| |||||| ||| |||||||| ||||| |||||||| ||||||||||||  |||||||    
T  7727 taaaagttgcgtcaaatagagtagttaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcct 7631  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 37444 - 37391
Alignment:
Q  164 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgttttt 217  Q
    ||||||||| ||  ||||||||||||||||| |||||||| |||||||||||||    
T  37444 tcaaacaaaatgatcaaacatgagaaagcatattctgacaatcaacatgttttt 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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