View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21162_high_16 (Length: 251)

Name: NF21162_high_16
Description: NF21162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21162_high_16
NF21162_high_16
[»] chr5 (46 HSPs)
chr5 (13-251)||(43550728-43550967)
chr5 (48-106)||(38696993-38697050)
chr5 (47-106)||(19650730-19650786)
chr5 (46-103)||(36700806-36700863)
chr5 (46-106)||(5776508-5776568)
chr5 (62-106)||(7649059-7649103)
chr5 (71-106)||(8786723-8786758)
chr5 (71-106)||(8839844-8839879)
chr5 (71-106)||(8990372-8990407)
chr5 (71-106)||(17064947-17064982)
chr5 (71-106)||(17210586-17210621)
chr5 (71-106)||(25754580-25754615)
chr5 (71-106)||(36226487-36226522)
chr5 (71-106)||(39850855-39850890)
chr5 (47-106)||(42097508-42097566)
chr5 (71-104)||(17916099-17916132)
chr5 (71-104)||(23206858-23206891)
chr5 (46-106)||(25781987-25782048)
chr5 (71-104)||(42207853-42207886)
chr5 (58-106)||(7938128-7938176)
chr5 (56-104)||(35402816-35402864)
chr5 (71-106)||(832202-832237)
chr5 (71-106)||(834215-834250)
chr5 (71-102)||(5769755-5769786)
chr5 (71-106)||(19128614-19128649)
chr5 (71-106)||(24836785-24836820)
chr5 (75-106)||(25793699-25793730)
chr5 (71-106)||(28766319-28766354)
chr5 (71-106)||(29403070-29403105)
chr5 (71-106)||(41613063-41613098)
chr5 (48-106)||(41862879-41862938)
chr5 (71-106)||(42516210-42516245)
chr5 (71-106)||(42918970-42919005)
chr5 (71-105)||(936144-936178)
chr5 (48-106)||(15988278-15988336)
chr5 (72-106)||(18526955-18526989)
chr5 (48-106)||(28095931-28095988)
chr5 (71-101)||(36337404-36337434)
chr5 (71-104)||(5026225-5026258)
chr5 (58-99)||(7464101-7464141)
chr5 (71-104)||(8943324-8943357)
chr5 (49-106)||(14000485-14000542)
chr5 (71-99)||(1611577-1611605)
chr5 (72-104)||(12659359-12659391)
chr5 (71-103)||(40716251-40716283)
chr5 (47-106)||(42027638-42027698)
[»] chr2 (55 HSPs)
chr2 (45-104)||(30976991-30977049)
chr2 (58-106)||(18072395-18072443)
chr2 (49-104)||(41122692-41122747)
chr2 (48-106)||(36080247-36080305)
chr2 (48-106)||(38692574-38692632)
chr2 (49-106)||(12069463-12069519)
chr2 (48-106)||(38702229-38702289)
chr2 (49-105)||(12069659-12069714)
chr2 (66-106)||(19063885-19063925)
chr2 (47-106)||(19813881-19813941)
chr2 (66-106)||(24100690-24100730)
chr2 (48-100)||(26403287-26403339)
chr2 (58-106)||(42060432-42060480)
chr2 (46-106)||(42949751-42949810)
chr2 (56-106)||(10553197-10553248)
chr2 (71-106)||(39271617-39271652)
chr2 (48-106)||(28146088-28146146)
chr2 (56-106)||(33676730-33676779)
chr2 (71-104)||(963278-963311)
chr2 (71-104)||(16039366-16039399)
chr2 (73-106)||(17372475-17372508)
chr2 (72-105)||(19133436-19133469)
chr2 (47-106)||(35916723-35916779)
chr2 (73-106)||(45407023-45407056)
chr2 (66-106)||(360351-360391)
chr2 (46-94)||(3357680-3357728)
chr2 (62-106)||(7603673-7603717)
chr2 (58-106)||(13594265-13594313)
chr2 (46-106)||(33312981-33313039)
chr2 (59-106)||(34063243-34063291)
chr2 (71-106)||(1071167-1071202)
chr2 (71-106)||(1397091-1397126)
chr2 (71-106)||(13836978-13837013)
chr2 (71-106)||(19064094-19064129)
chr2 (71-106)||(20579368-20579403)
chr2 (71-106)||(22388351-22388386)
chr2 (71-106)||(24005109-24005144)
chr2 (71-106)||(36205235-36205270)
chr2 (71-106)||(36817519-36817554)
chr2 (75-106)||(44020061-44020092)
chr2 (66-104)||(28284298-28284336)
chr2 (73-103)||(35125962-35125992)
chr2 (56-106)||(37610022-37610071)
chr2 (72-106)||(40301632-40301666)
chr2 (46-106)||(629635-629696)
chr2 (71-104)||(7537272-7537305)
chr2 (46-106)||(17372810-17372871)
chr2 (46-106)||(21839612-21839669)
chr2 (73-106)||(27360046-27360079)
chr2 (49-106)||(41014290-41014347)
chr2 (48-104)||(9192133-9192189)
chr2 (66-106)||(9415056-9415096)
chr2 (71-103)||(19039847-19039879)
chr2 (47-100)||(20974014-20974069)
chr2 (46-101)||(40497555-40497611)
[»] chr3 (47 HSPs)
chr3 (48-106)||(14265815-14265873)
chr3 (47-106)||(40360343-40360401)
chr3 (56-106)||(21030581-21030631)
chr3 (46-106)||(9860367-9860425)
chr3 (46-106)||(4577816-4577876)
chr3 (71-106)||(45885816-45885851)
chr3 (71-106)||(49429168-49429203)
chr3 (71-106)||(50099028-50099063)
chr3 (56-102)||(7777593-7777639)
chr3 (48-106)||(51006190-51006247)
chr3 (71-104)||(2363559-2363592)
chr3 (71-104)||(14899909-14899942)
chr3 (71-104)||(17586894-17586927)
chr3 (58-106)||(45644140-45644189)
chr3 (58-106)||(3418811-3418858)
chr3 (71-107)||(15445554-15445590)
chr3 (71-103)||(22102442-22102474)
chr3 (71-103)||(22177390-22177422)
chr3 (58-106)||(30102546-30102593)
chr3 (46-106)||(42401558-42401618)
chr3 (47-106)||(3889957-3890015)
chr3 (71-106)||(3899802-3899837)
chr3 (71-106)||(5812118-5812153)
chr3 (71-106)||(7791284-7791319)
chr3 (71-106)||(8149558-8149593)
chr3 (71-106)||(14418999-14419034)
chr3 (71-106)||(18722145-18722180)
chr3 (71-106)||(21789583-21789618)
chr3 (49-100)||(35379886-35379937)
chr3 (71-106)||(37431525-37431560)
chr3 (46-104)||(41923354-41923413)
chr3 (48-106)||(9859888-9859946)
chr3 (46-104)||(17476385-17476443)
chr3 (46-104)||(22526404-22526462)
chr3 (71-101)||(29625618-29625648)
chr3 (62-100)||(38358675-38358713)
chr3 (56-106)||(42391886-42391936)
chr3 (48-102)||(42896799-42896853)
chr3 (71-104)||(5907332-5907365)
chr3 (72-105)||(10438260-10438293)
chr3 (71-104)||(29749601-29749634)
chr3 (71-103)||(611836-611868)
chr3 (48-104)||(1149353-1149408)
chr3 (74-106)||(21495578-21495610)
chr3 (72-104)||(26978011-26978043)
chr3 (58-106)||(27042345-27042393)
chr3 (72-104)||(54982630-54982662)
[»] chr7 (35 HSPs)
chr7 (49-106)||(19371744-19371801)
chr7 (48-106)||(10040429-10040487)
chr7 (56-104)||(23050888-23050936)
chr7 (70-106)||(31283494-31283530)
chr7 (48-104)||(39434956-39435011)
chr7 (56-104)||(47901791-47901838)
chr7 (47-102)||(1786979-1787034)
chr7 (49-104)||(25750869-25750923)
chr7 (71-106)||(36609854-36609889)
chr7 (47-106)||(48624777-48624836)
chr7 (58-103)||(2475063-2475108)
chr7 (61-106)||(21635377-21635421)
chr7 (48-105)||(25834577-25834633)
chr7 (49-106)||(39151810-39151866)
chr7 (46-106)||(39389537-39389600)
chr7 (66-106)||(10199278-10199318)
chr7 (48-104)||(20055633-20055689)
chr7 (71-103)||(46622394-46622426)
chr7 (71-106)||(16849085-16849120)
chr7 (69-104)||(21094027-21094062)
chr7 (71-106)||(27509663-27509698)
chr7 (71-106)||(48103784-48103819)
chr7 (71-106)||(48525923-48525958)
chr7 (71-105)||(1748395-1748429)
chr7 (46-107)||(8390359-8390418)
chr7 (71-104)||(21305486-21305519)
chr7 (71-104)||(21766221-21766254)
chr7 (72-104)||(789166-789198)
chr7 (48-104)||(4550331-4550387)
chr7 (71-103)||(7525834-7525866)
chr7 (46-94)||(10199656-10199703)
chr7 (74-106)||(20034991-20035023)
chr7 (74-106)||(20045402-20045434)
chr7 (72-104)||(23653421-23653453)
chr7 (66-106)||(36251857-36251897)
[»] chr6 (28 HSPs)
chr6 (49-106)||(20715853-20715910)
chr6 (56-106)||(32531144-32531194)
chr6 (48-106)||(17353125-17353180)
chr6 (71-106)||(14662352-14662387)
chr6 (71-106)||(28712002-28712037)
chr6 (48-106)||(21254503-21254561)
chr6 (66-106)||(14965254-14965294)
chr6 (58-106)||(22535467-22535515)
chr6 (71-106)||(7451731-7451766)
chr6 (71-106)||(8771731-8771766)
chr6 (71-106)||(10460145-10460180)
chr6 (71-106)||(12169906-12169941)
chr6 (71-106)||(13698172-13698207)
chr6 (71-106)||(23124414-23124449)
chr6 (58-101)||(24062668-24062711)
chr6 (71-106)||(30254376-30254411)
chr6 (47-106)||(31861864-31861922)
chr6 (71-106)||(33573362-33573397)
chr6 (71-106)||(34638017-34638052)
chr6 (49-106)||(2485925-2485980)
chr6 (71-104)||(13240723-13240756)
chr6 (71-104)||(14426664-14426697)
chr6 (71-100)||(26251959-26251988)
chr6 (46-106)||(2441443-2441501)
chr6 (58-106)||(19146172-19146219)
chr6 (46-106)||(21104577-21104637)
chr6 (71-103)||(32333306-32333338)
chr6 (58-106)||(34210068-34210116)
[»] chr4 (50 HSPs)
chr4 (58-106)||(27376335-27376383)
chr4 (47-96)||(36927004-36927053)
chr4 (48-106)||(46620623-46620683)
chr4 (47-103)||(5720405-5720461)
chr4 (71-106)||(160848-160883)
chr4 (47-106)||(20702375-20702434)
chr4 (71-106)||(36802616-36802651)
chr4 (59-106)||(41169188-41169234)
chr4 (71-106)||(52954110-52954145)
chr4 (48-106)||(13781495-13781553)
chr4 (48-106)||(26007790-26007846)
chr4 (72-106)||(35447680-35447714)
chr4 (46-106)||(2548435-2548498)
chr4 (71-104)||(6196665-6196698)
chr4 (71-104)||(56085135-56085168)
chr4 (66-106)||(34409784-34409824)
chr4 (72-104)||(47931360-47931392)
chr4 (49-104)||(549022-549077)
chr4 (71-106)||(1580037-1580072)
chr4 (71-106)||(2133558-2133593)
chr4 (71-106)||(2358660-2358695)
chr4 (73-104)||(19437295-19437326)
chr4 (71-106)||(20702546-20702581)
chr4 (71-106)||(25458865-25458900)
chr4 (71-106)||(26054473-26054508)
chr4 (71-106)||(26427133-26427168)
chr4 (71-106)||(28494917-28494952)
chr4 (71-106)||(33145066-33145101)
chr4 (71-106)||(35595617-35595652)
chr4 (71-106)||(49574901-49574936)
chr4 (71-106)||(50561233-50561268)
chr4 (71-106)||(51400138-51400173)
chr4 (72-106)||(32006689-32006723)
chr4 (48-106)||(37143320-37143376)
chr4 (71-104)||(594544-594577)
chr4 (71-104)||(2478456-2478489)
chr4 (71-100)||(4951561-4951590)
chr4 (46-106)||(4958897-4958957)
chr4 (71-104)||(5662129-5662162)
chr4 (71-104)||(7059381-7059414)
chr4 (71-104)||(19442735-19442768)
chr4 (71-104)||(20818212-20818245)
chr4 (71-104)||(30503152-30503185)
chr4 (71-103)||(1397205-1397237)
chr4 (46-106)||(2291039-2291098)
chr4 (72-104)||(6488117-6488149)
chr4 (46-90)||(11064486-11064529)
chr4 (48-104)||(26878612-26878668)
chr4 (58-106)||(27088511-27088557)
chr4 (48-106)||(46251276-46251331)
[»] chr1 (56 HSPs)
chr1 (47-106)||(48419578-48419637)
chr1 (47-106)||(52043397-52043456)
chr1 (48-106)||(12301035-12301093)
chr1 (48-106)||(24005042-24005099)
chr1 (48-102)||(46880084-46880138)
chr1 (58-106)||(11344958-11345005)
chr1 (71-106)||(11409002-11409037)
chr1 (71-106)||(12267084-12267119)
chr1 (71-106)||(13303962-13303997)
chr1 (71-106)||(24561246-24561281)
chr1 (49-104)||(27904337-27904392)
chr1 (71-106)||(34969359-34969394)
chr1 (71-106)||(36605512-36605547)
chr1 (71-106)||(40808771-40808806)
chr1 (66-104)||(1580656-1580694)
chr1 (46-104)||(8096263-8096320)
chr1 (71-105)||(21343918-21343952)
chr1 (71-105)||(21348783-21348817)
chr1 (48-106)||(33934127-33934185)
chr1 (56-106)||(48420008-48420058)
chr1 (48-104)||(115872-115929)
chr1 (73-106)||(31528654-31528687)
chr1 (71-104)||(33193951-33193984)
chr1 (71-104)||(50943905-50943938)
chr1 (46-106)||(1531254-1531312)
chr1 (47-106)||(8574035-8574092)
chr1 (74-106)||(8699300-8699332)
chr1 (46-106)||(40403430-40403490)
chr1 (71-106)||(13315108-13315143)
chr1 (71-106)||(13315236-13315271)
chr1 (71-106)||(16424503-16424538)
chr1 (71-106)||(21335039-21335074)
chr1 (71-106)||(25298072-25298107)
chr1 (71-106)||(33326784-33326819)
chr1 (48-95)||(34748850-34748897)
chr1 (47-106)||(43575637-43575696)
chr1 (71-106)||(45943310-45943345)
chr1 (71-106)||(47576724-47576759)
chr1 (47-106)||(23773357-23773418)
chr1 (71-104)||(898934-898967)
chr1 (72-105)||(12264913-12264946)
chr1 (48-106)||(14386889-14386949)
chr1 (71-104)||(17236668-17236701)
chr1 (22-103)||(21336202-21336283)
chr1 (61-106)||(31845126-31845170)
chr1 (46-106)||(48995430-48995491)
chr1 (71-104)||(49368312-49368345)
chr1 (46-106)||(11978243-11978303)
chr1 (71-103)||(12214144-12214176)
chr1 (46-94)||(16143447-16143494)
chr1 (72-104)||(17579927-17579959)
chr1 (74-106)||(25822149-25822181)
chr1 (58-106)||(37706032-37706078)
chr1 (47-106)||(38619625-38619685)
chr1 (48-104)||(42589745-42589800)
chr1 (71-99)||(44667760-44667788)
[»] chr8 (29 HSPs)
chr8 (46-106)||(34966719-34966778)
chr8 (71-106)||(1554792-1554827)
chr8 (71-106)||(26536344-26536379)
chr8 (47-106)||(27020488-27020546)
chr8 (58-104)||(2692043-2692089)
chr8 (71-105)||(24852496-24852530)
chr8 (71-104)||(7019977-7020010)
chr8 (71-104)||(11937839-11937872)
chr8 (48-104)||(45488994-45489051)
chr8 (62-106)||(18638233-18638277)
chr8 (58-106)||(18918323-18918370)
chr8 (56-100)||(23085494-23085537)
chr8 (71-106)||(288789-288824)
chr8 (71-106)||(1170524-1170559)
chr8 (71-106)||(1566254-1566289)
chr8 (71-106)||(3739598-3739633)
chr8 (71-106)||(4418420-4418455)
chr8 (47-94)||(8522554-8522601)
chr8 (71-106)||(15919565-15919600)
chr8 (58-101)||(18994712-18994755)
chr8 (71-106)||(28205453-28205488)
chr8 (71-106)||(41666768-41666803)
chr8 (71-106)||(41942499-41942534)
chr8 (72-106)||(5182663-5182697)
chr8 (71-104)||(15898790-15898823)
chr8 (77-106)||(25722818-25722847)
chr8 (46-107)||(15044276-15044335)
chr8 (48-100)||(27837575-27837627)
chr8 (66-106)||(34180072-34180112)
[»] scaffold0268 (1 HSPs)
scaffold0268 (66-106)||(21612-21652)
[»] scaffold0196 (1 HSPs)
scaffold0196 (58-106)||(8706-8754)
[»] scaffold0137 (1 HSPs)
scaffold0137 (46-106)||(6919-6978)
[»] scaffold0071 (1 HSPs)
scaffold0071 (71-107)||(16603-16639)
[»] scaffold0707 (1 HSPs)
scaffold0707 (71-106)||(395-430)
[»] scaffold0118 (1 HSPs)
scaffold0118 (71-106)||(14769-14804)
[»] scaffold0024 (1 HSPs)
scaffold0024 (71-102)||(44274-44305)
[»] scaffold0013 (1 HSPs)
scaffold0013 (71-106)||(41563-41598)
[»] scaffold0445 (1 HSPs)
scaffold0445 (72-106)||(4850-4884)
[»] scaffold1050 (1 HSPs)
scaffold1050 (71-100)||(563-592)


Alignment Details
Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 43550967 - 43550728
Alignment:
Q  13 aatataaccaaaatataatctaagttcttttgtcaaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattatagatctttn 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  43550967 aatataaccaaaatataatctaagttcttttgtcaaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattatagattttaa 43550868  T
Q  113 nnnnnnnncaaaca-cactctatcaattgagctaacttcattcattatgattaattttactaataactagactccaactcgtgttatgcatgagtttgtt 211  Q
             ||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43550867 aaataaaaaaaaaaacacactatcaattgagctaacttcattgattatgattaattttactaataactagactccaactcgtgttatgcatgagtttgtt 43550768  T
Q  212 tagaattttatataggctaccaatgatattattgaagaaa 251  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  43550767 tagaatttcatataggctaccaatggtattattgaagaaa 43550728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 38696993 - 38697050
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  38696993 aaaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattataga 38697050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 19650786 - 19650730
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||||||||||   |||||||||| |||||||||||||||||||||||||    
T  19650786 aaaaaatatataatctaaatt---ttttttaatggcaccaacaacaatctttattataga 19650730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 36700863 - 36700806
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattat 103  Q
    ||||||||||| ||| |||||| | |||||||||||||||||||| ||||||||||||    
T  36700863 caaaaaatatataatttaaattcttttttttaatgacaccaacaataatctttattat 36700806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 5776508 - 5776568
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  5776508 caaaaaaaatataatctaaattttttttttaaatgataccaacaacaatctttattataga 5776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 7649059 - 7649103
Alignment:
Q  62 taaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| | ||||||||||||||||||||||||||||||||||||    
T  7649059 taaattcttttttttaatgacaccaacaacaatctttattataga 7649103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 8786723 - 8786758
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  8786723 ttttttaatgacaccaacaacaatctttattataga 8786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 8839879 - 8839844
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  8839879 ttttttaatgacaccaacaacaatctttattataga 8839844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 8990407 - 8990372
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  8990407 ttttttaatgacaccaacaacaatctttattataga 8990372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 17064947 - 17064982
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  17064947 ttttttaatgacaccaacaacaatctttattataga 17064982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 17210621 - 17210586
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  17210621 ttttttaatgacaccaacaacaatctttattataga 17210586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 25754580 - 25754615
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  25754580 ttttttaatgacaccaacaacaatctttattataga 25754615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 36226522 - 36226487
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  36226522 ttttttaatgacaccaacaacaatctttattataga 36226487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 39850890 - 39850855
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  39850890 ttttttaatgacaccaacaacaatctttattataga 39850855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 42097566 - 42097508
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| |||||||| | |||||||| |||||||||| ||||||||||||||||    
T  42097566 aaaaaatataaa-tctaaattcttttttttaacgacaccaacatcaatctttattataga 42097508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 17916099 - 17916132
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  17916099 ttttttaatgacaccaacaacaatctttattata 17916132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 23206891 - 23206858
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  23206891 ttttttaatgacaccaacaacaatctttattata 23206858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 25781987 - 25782048
Alignment:
Q  46 caaaaaatataaaatctaaattatg-ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| |  |||||||||||||||||||||||| |||||||||||    
T  25781987 caaaaaaaatataatctaaattcttattttttaatgacaccaacaacaatttttattataga 25782048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 42207886 - 42207853
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  42207886 ttttttaatgacaccaacaacaatctttattata 42207853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 7938128 - 7938176
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | |||||||||||||| |||||| ||||||||||||||    
T  7938128 aatctaaattcttttttttaatgacacgaacaacgatctttattataga 7938176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 35402816 - 35402864
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| |||||| | ||||||||||||||| ||||||||||||||||||    
T  35402816 aaaatataaattcttttttttaatgacaccgacaacaatctttattata 35402864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 832237 - 832202
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| |||||||||||||||||||||||||||||    
T  832237 ttttttcatgacaccaacaacaatctttattataga 832202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 834215 - 834250
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||||||||||||||||||||||||||||    
T  834215 ttttttactgacaccaacaacaatctttattataga 834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 102
Target Start/End: Complemental strand, 5769786 - 5769755
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttatta 102  Q
    ||||||||||||||||||||||||||||||||    
T  5769786 ttttttaatgacaccaacaacaatctttatta 5769755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 19128614 - 19128649
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  19128614 ttttttaatgacaccaacaacgatctttattataga 19128649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 24836820 - 24836785
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  24836820 ttttttaatgacaccaacaacaatatttattataga 24836785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 106
Target Start/End: Complemental strand, 25793730 - 25793699
Alignment:
Q  75 ttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||    
T  25793730 ttaatgacaccaacaacaatctttattataga 25793699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 28766354 - 28766319
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28766354 ttttttaattacaccaacaacaatctttattataga 28766319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 29403070 - 29403105
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  29403070 ttttttaacgacaccaacaacaatctttattataga 29403105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 41613098 - 41613063
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||| ||||    
T  41613098 ttttttaatgacaccaacaacaatctttattgtaga 41613063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 41862938 - 41862879
Alignment:
Q  48 aaaaatataaaatctaaattatgtttt-ttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| |  ||| |||||||| |||||||||||||||||||||||    
T  41862938 aaaaatatataatctaaattcttatttcttaatgacgccaacaacaatctttattataga 41862879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 42516245 - 42516210
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  42516245 ttttttaatgacaccaacaacaatttttattataga 42516210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 42918970 - 42919005
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  42918970 ttttttaatcacaccaacaacaatctttattataga 42919005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 936178 - 936144
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatag 105  Q
    ||||| |||||||||||||||||||||||||||||    
T  936178 tttttgaatgacaccaacaacaatctttattatag 936144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 15988278 - 15988336
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||| ||| ||| ||||||||||||| ||||||| ||||||||||||||    
T  15988278 aaaaaaatataatcaaaagtattttttttaatgacatcaacaacgatctttattataga 15988336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 18526989 - 18526955
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||||||||||||    
T  18526989 ttttgaatgacaccaacaacaatctttattataga 18526955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 28095988 - 28095931
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| | ||||| ||||||| |||||||||||||| |||||||    
T  28095988 aaaaatatataatctaaattct-tttttcaatgacatcaacaacaatctttgttataga 28095931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 101
Target Start/End: Complemental strand, 36337434 - 36337404
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttatt 101  Q
    |||||||||||||||||||||||||||||||    
T  36337434 ttttttaatgacaccaacaacaatctttatt 36337404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 5026258 - 5026225
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||| |||||||||||||||||||    
T  5026258 ttttttaatgacacaaacaacaatctttattata 5026225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 7464101 - 7464141
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatcttta 99  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  7464101 aatctaaattct-ttttttaatgacaccaacaacaatcttta 7464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 8943324 - 8943357
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||||||| |||||    
T  8943324 ttttttaatgacaccaacaacaatctttgttata 8943357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 14000542 - 14000485
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| |||||||||||||||| ||||||||||| |   | ||||||||||||||||||    
T  14000542 aaaaaataaaatctaaattattttttttaatgatattgagaacaatctttattataga 14000485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 99
Target Start/End: Complemental strand, 1611605 - 1611577
Alignment:
Q  71 ttttttaatgacaccaacaacaatcttta 99  Q
    |||||||||||||||||||||||||||||    
T  1611605 ttttttaatgacaccaacaacaatcttta 1611577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 12659359 - 12659391
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| |||||||||||||||||||    
T  12659359 tttttaatgacactaacaacaatctttattata 12659391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 40716283 - 40716251
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    ||||||||||| |||||||||||||||||||||    
T  40716283 ttttttaatgaaaccaacaacaatctttattat 40716251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 42027638 - 42027698
Alignment:
Q  47 aaaaaatataaaatctaaattatgtttt-ttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| |||||||||| | |||| ||||||||| |||||||  |||||||||||||    
T  42027638 aaaaaatatataatctaaattcttttttgttaatgacatcaacaacggtctttattataga 42027698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 104
Target Start/End: Original strand, 30976991 - 30977049
Alignment:
Q  45 tcaaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  30976991 tcaaaaaatatataatctaaattct-ttttttaatgacaccaacaacaatctttattata 30977049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 18072443 - 18072395
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  18072443 aatctaaattcttttttttaatgacaccaacaacaatctttattataga 18072395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 41122747 - 41122692
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  41122747 aaaaaatataatctaaattcttttttttaatgacaccaacaacaatctttattata 41122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 36080305 - 36080247
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| |  |||||||||||||||||||||||||||||||||||    
T  36080305 aaaaaaatataatctaaattcttatttttaatgacaccaacaacaatctttattataga 36080247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 38692632 - 38692574
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  38692632 aaaaaaatataatctaaattctattttttaatgacaccaataacaatctttattataga 38692574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 12069519 - 12069463
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  12069519 aaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattataga 12069463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 38702229 - 38702289
Alignment:
Q  48 aaaaatataaaatctaaattatg--ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| |   ||||||||||||||||||||||||||||||||||||    
T  38702229 aaaaatatataatctaaattcttatttttttaatgacaccaacaacaatctttattataga 38702289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 105
Target Start/End: Complemental strand, 12069714 - 12069659
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattatag 105  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||    
T  12069714 aaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattatag 12069659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 19063925 - 19063885
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  19063925 ttattttttttaatgacaccaacaacaatctttattataga 19063885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 19813881 - 19813941
Alignment:
Q  47 aaaaaatataaaatctaaattatgtttt-ttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||| |||||| | |||| ||||||||||||||||||||||||||||||||    
T  19813881 aaaaaatatataatttaaattctatttttttaatgacaccaacaacaatctttattataga 19813941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 24100730 - 24100690
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  24100730 ttattttttttaatgacaccaacaacaatctttattataga 24100690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 26403287 - 26403339
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttat 100  Q
    ||||| || ||||||||||| | ||||||||||||||||||||||||||||||    
T  26403287 aaaaaaattaaatctaaattcttttttttaatgacaccaacaacaatctttat 26403339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 42060432 - 42060480
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  42060432 aatctaaattcttttttttaatgacaccaacaacaatttttattataga 42060480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 42949810 - 42949751
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||||||| ||||||||||    
T  42949810 caaaaaaaatataatctaaattcttttttttaatgacaccaacaacaatc-ttattataga 42949751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 10553248 - 10553197
Alignment:
Q  56 aaaatctaaatt-atgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||    
T  10553248 aaaatctaaattcattttttttaatgacaccaacaacaatttttattataga 10553197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 39271617 - 39271652
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  39271617 ttttttaatgacaccaacaacaatctttattataga 39271652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 28146146 - 28146088
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| |  |||||||||||||||||||| || |||||||||||    
T  28146146 aaaaatatataatctaaattcttgtttttaatgacaccaacaacgatatttattataga 28146088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 33676730 - 33676779
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  33676730 aaaatctaaattct-tcttttaatgacaccaacaacaatctttattataga 33676779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 963278 - 963311
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  963278 ttttttaatgacaccaacaacaatctttattata 963311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 16039399 - 16039366
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  16039399 ttttttaatgacaccaacaacaatctttattata 16039366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 17372508 - 17372475
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||    
T  17372508 ttttaatgacaccaacaacaatctttattataga 17372475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 19133469 - 19133436
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattatag 105  Q
    ||||||||||||||||||||||||||||||||||    
T  19133469 tttttaatgacaccaacaacaatctttattatag 19133436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 35916779 - 35916723
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||||||||||   ||| |||||||||||||||||||| |||||||||||    
T  35916779 aaaaaatatataatctaaatt---tttcttaatgacaccaacaacaatttttattataga 35916723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 45407056 - 45407023
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||    
T  45407056 ttttaatgacaccaacaacaatctttattataga 45407023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 360391 - 360351
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||||||| ||||||||||    
T  360391 ttattttttttaatgacaccaacaacaatcattattataga 360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 3357680 - 3357728
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaat 94  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||||||    
T  3357680 caaaaaaaatataatctaaattcttttttttaatgacaccaacaacaat 3357728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 7603673 - 7603717
Alignment:
Q  62 taaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||| |||||| ||||||||||||||    
T  7603673 taaattattttttttaatgacacaaacaacgatctttattataga 7603717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 13594265 - 13594313
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||| ||||||| ||||||||||||||    
T  13594265 aatctaaattcttttttttaatgacatcaacaacgatctttattataga 13594313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 33313039 - 33312981
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| |||||||||| | ||||||||||||| |||||||||| |||||||||||    
T  33313039 caaaaaatatataatctaaattct-ttttttaatgacatcaacaacaat-tttattataga 33312981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 34063291 - 34063243
Alignment:
Q  59 atctaaattatg-ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  34063291 atctaaattatcattttttaatgacaccaacaacgatctttattataga 34063243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 1071167 - 1071202
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  1071167 ttttttaatgacatcaacaacaatctttattataga 1071202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 1397126 - 1397091
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||||||||| |||||    
T  1397126 ttttttaatgacaccaacaacaatctttatcataga 1397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 13836978 - 13837013
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  13836978 ttttttaatgacgccaacaacaatctttattataga 13837013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 19064129 - 19064094
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  19064129 ttttttaatgacacgaacaacaatctttattataga 19064094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 20579368 - 20579403
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||| ||||||||||||||||||    
T  20579368 ttttttaatgacaccaaaaacaatctttattataga 20579403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 22388386 - 22388351
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  22388386 ttttttaatgacaccaacaacaatttttattataga 22388351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 24005109 - 24005144
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  24005109 ttttttaatgacaccaacaacgatctttattataga 24005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 36205235 - 36205270
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  36205235 ttttttaatgacaccaacaacaatatttattataga 36205270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 36817519 - 36817554
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||| ||||    
T  36817519 ttttttaatgacaccaacaacaatctttattgtaga 36817554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 106
Target Start/End: Original strand, 44020061 - 44020092
Alignment:
Q  75 ttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||    
T  44020061 ttaatgacaccaacaacaatctttattataga 44020092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 28284336 - 28284298
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  28284336 ttattttttttaatgaccccaacaacaatctttattata 28284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 35125962 - 35125992
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||||||||||||||||    
T  35125962 ttttaatgacaccaacaacaatctttattat 35125992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 37610071 - 37610022
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| ||  |||||||| |||||||||||||||||||||||    
T  37610071 aaaatctaaattat-ttacttaatgacgccaacaacaatctttattataga 37610022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 40301632 - 40301666
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| ||||||||||||||||||||||    
T  40301632 tttttaatgacatcaacaacaatctttattataga 40301666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 629696 - 629635
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttt-taatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||| ||| |||||||| ||||||||||||||||||    
T  629696 caaaaaaaatataatctaaattctttttttataacgacaccaaaaacaatctttattataga 629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 7537272 - 7537305
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  7537272 ttttttagtgacaccaacaacaatctttattata 7537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 17372871 - 17372810
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttt-taatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||||| ||||| | |||||||||||||| ||||||| ||||||    
T  17372871 caaaaaaaatataatctaaattatttttttattatgacaccaacaaccatctttactataga 17372810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 21839669 - 21839612
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| |||  |||||||||||  ||||||||||||||||||||||| |||||||||||    
T  21839669 caaaaaaaatatcatctaaattat--tttttaatgacaccaacaacaat-tttattataga 21839612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 106
Target Start/End: Original strand, 27360046 - 27360079
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||    
T  27360046 ttttaatggcaccaacaacaatctttattataga 27360079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 41014347 - 41014290
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | | ||||||||||| |||||||||| |||||||||||    
T  41014347 aaaaaatataatctaaattctttattttaatgacatcaacaacaatatttattataga 41014290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 9192133 - 9192189
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| ||| |||||| | |||| |||||||| ||||||||||||||||||||    
T  9192133 aaaaaaatataatttaaattcttttttgtaatgacatcaacaacaatctttattata 9192189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 9415056 - 9415096
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||| |||||||||||| |||||||||||    
T  9415056 ttattttttttaatgataccaacaacaatttttattataga 9415096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 19039879 - 19039847
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    ||||||||||| |||||||||||||||||||||    
T  19039879 ttttttaatgataccaacaacaatctttattat 19039847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 20974069 - 20974014
Alignment:
Q  47 aaaaaatataaaatctaaattatg--ttttttaatgacaccaacaacaatctttat 100  Q
    ||||||||||||||||||||| |   |||||||||||||| ||||| |||||||||    
T  20974069 aaaaaatataaaatctaaattcttatttttttaatgacacaaacaataatctttat 20974014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 40497555 - 40497611
Alignment:
Q  46 caaaaaatataaaatctaaatt-atgttttttaatgacaccaacaacaatctttatt 101  Q
    ||||||| ||| |||||||||| |  ||||||||| |||||||||||||||||||||    
T  40497555 caaaaaaaatataatctaaattcaatttttttaataacaccaacaacaatctttatt 40497611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 14265873 - 14265815
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| | ||||||||||||| ||||||||||||||||||||||    
T  14265873 aaaaatatataatctaaattcttttttttaatgacatcaacaacaatctttattataga 14265815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 40360401 - 40360343
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  40360401 aaaaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattataga 40360343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 21030581 - 21030631
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  21030581 aaaatataaataattttttttaatgacaccaacaacaatctttattataga 21030631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 9860367 - 9860425
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||||| |||||  |||||||||||||||||||||||||||||    
T  9860367 caaaaaaaatataatctaaattattttttt--atgacaccaacaacaatctttattataga 9860425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 4577816 - 4577876
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||| |||||| | ||||| ||||||||||||||||||||||||||||||    
T  4577816 caaaaaaaatataatataaattctttttttaaatgacaccaacaacaatctttattataga 4577876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 45885851 - 45885816
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  45885851 ttttttaatgacaccaacaacaatctttattataga 45885816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 49429168 - 49429203
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  49429168 ttttttaatgacaccaacaacaatctttattataga 49429203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 50099063 - 50099028
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  50099063 ttttttaatgacaccaacaacaatctttattataga 50099028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 7777639 - 7777593
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttatta 102  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||||    
T  7777639 aaaatctaaattcttttttttaatgacaccaacaacgatctttatta 7777593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 51006247 - 51006190
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | |||||||| |||||||||||||||||||||||||||    
T  51006247 aaaaaaatataatctaaattct-ttttttaacgacaccaacaacaatctttattataga 51006190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 2363559 - 2363592
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  2363559 ttttttaatgacaccaacaacaatctttattata 2363592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 14899942 - 14899909
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  14899942 ttttttaatgacaccaacaacaatctttattata 14899909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 17586894 - 17586927
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  17586894 ttttttaatgacaccaacaacaatctttattata 17586927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 45644189 - 45644140
Alignment:
Q  58 aatctaaattatg-ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||    
T  45644189 aatctaaattattattttttaatgacaccaacgacaatctttattataga 45644140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 3418858 - 3418811
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||    
T  3418858 aatctaaattct-ttttttaatgataccaacaacaatctttattataga 3418811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 15445554 - 15445590
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatagat 107  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15445554 ttttttaatgacaccaacaacaatcgttattatagat 15445590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 22102474 - 22102442
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||||||||||||||||||    
T  22102474 ttttttaatgacaccaacaacaatctttattat 22102442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 22177422 - 22177390
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||||||||||||||||||    
T  22177422 ttttttaatgacaccaacaacaatctttattat 22177390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 30102546 - 30102593
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||||||    
T  30102546 aatctaaattct-ttttttaatgacaccaacaacgatctttattataga 30102593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 42401558 - 42401618
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||| |||||| | |||||||| |||||||||||||||| ||||||||||    
T  42401558 caaaaaaaatataatataaattcttttttttaacgacaccaacaacaatcattattataga 42401618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 3889957 - 3890015
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||| |||||| | || ||||||||||||||||||||||||| |||||||    
T  3889957 aaaaaatatataatataaattct-ttatttaatgacaccaacaacaatcttttttataga 3890015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 3899802 - 3899837
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  3899802 ttttttaatgacatcaacaacaatctttattataga 3899837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 5812118 - 5812153
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  5812118 ttttttaatgacaccaacaacgatctttattataga 5812153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 7791284 - 7791319
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  7791284 ttttttaatgacaccaacaacaatatttattataga 7791319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 8149558 - 8149593
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8149558 ttttttaatgataccaacaacaatctttattataga 8149593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 14419034 - 14418999
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14419034 ttttttaatgacatcaacaacaatctttattataga 14418999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 18722145 - 18722180
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  18722145 ttttttaatgacaccaacaacaatatttattataga 18722180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 21789583 - 21789618
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||| |||||||||||||||    
T  21789583 ttttttaatgacaccaacaaaaatctttattataga 21789618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 35379937 - 35379886
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttat 100  Q
    |||| ||| ||||||||||   ||||||||||||||||||||||||||||||    
T  35379937 aaaaaatataatctaaattcctttttttaatgacaccaacaacaatctttat 35379886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 37431560 - 37431525
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||| ||||||||||||||||    
T  37431560 ttttttaatgacaccaacatcaatctttattataga 37431525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 41923413 - 41923354
Alignment:
Q  46 caaaaaatataaaatctaaattatgtttttt-aatgacaccaacaacaatctttattata 104  Q
    ||||||| ||| |||||||||| | |||||| |||||||||||||||||| |||||||||    
T  41923413 caaaaaaaatataatctaaattctttttttttaatgacaccaacaacaatttttattata 41923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 9859888 - 9859946
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | |||||||| ||||| |||||||||||||||| ||||    
T  9859888 aaaaaaatataatctaaattcttttttttaacgacactaacaacaatctttattttaga 9859946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 17476443 - 17476385
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||| | |||||||||||  | ||||||||| ||| ||||||||||||||||||||    
T  17476443 caaaaaaaaaaaaatctaaatccttttttttaatcacatcaacaacaatctttattata 17476385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 22526462 - 22526404
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||| ||| |||||||||| | ||||| ||||| |||||||| |||||||||||||    
T  22526462 caaaaaaaatataatctaaattctttttttgaatgagaccaacaataatctttattata 22526404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 101
Target Start/End: Original strand, 29625618 - 29625648
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttatt 101  Q
    |||||||||||||||||||||||||||||||    
T  29625618 ttttttaatgacaccaacaacaatctttatt 29625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Complemental strand, 38358713 - 38358675
Alignment:
Q  62 taaattatgttttttaatgacaccaacaacaatctttat 100  Q
    |||||| | ||||||||||||||||||||||||||||||    
T  38358713 taaattcttttttttaatgacaccaacaacaatctttat 38358675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 106
Target Start/End: Original strand, 42391886 - 42391936
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| | | |||||||||||||  |||||||||||||||||||    
T  42391886 aaaatctaaattctttgttttaatgacacctgcaacaatctttattataga 42391936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 42896799 - 42896853
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttatta 102  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||  ||||||||||    
T  42896799 aaaaaaatataatctaaattcttttttttaatgacaccaacaaacatctttatta 42896853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 5907332 - 5907365
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||||||||||||||||||||||||||||    
T  5907332 tttttaaatgacaccaacaacaatctttattata 5907365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 10438293 - 10438260
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattatag 105  Q
    |||||||||||||||||||||||| |||||||||    
T  10438293 tttttaatgacaccaacaacaatcattattatag 10438260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 29749634 - 29749601
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||| |||||||||||||||||    
T  29749634 ttttttaatgacaccatcaacaatctttattata 29749601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 611868 - 611836
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    ||||||||||||||||||||| |||||||||||    
T  611868 ttttttaatgacaccaacaacgatctttattat 611836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 1149353 - 1149408
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| |||||||||| | |||||||| || ||||||||||||||||||||||    
T  1149353 aaaaaaatataatctaaattcttttttttaa-gagaccaacaacaatctttattata 1149408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 21495610 - 21495578
Alignment:
Q  74 tttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||||||||||    
T  21495610 tttactgacaccaacaacaatctttattataga 21495578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 26978043 - 26978011
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||| ||||||||||||||||||||    
T  26978043 tttttaatgacagcaacaacaatctttattata 26978011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 27042393 - 27042345
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||   |||||||||||||  |||||||||||||||||||||    
T  27042393 aatctaaattcatttttttaatgacattaacaacaatctttattataga 27042345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 54982662 - 54982630
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| ||||||||    
T  54982662 tttttaatgacaccaacaacaatcattattata 54982630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 19371801 - 19371744
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  19371801 aaaaaatataatctaaattcttttttttaatgacaccaacaacaatctttattataga 19371744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 10040487 - 10040429
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | |||||||||||| |||||||||||||||||||||||    
T  10040487 aaaaaaatataatctaaattcttttttttaatgacgccaacaacaatctttattataga 10040429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 23050936 - 23050888
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||||    
T  23050936 aaaatctaaattcttttttttaatgacacaaacaacaatctttattata 23050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 31283494 - 31283530
Alignment:
Q  70 gttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||||||||||||||||    
T  31283494 gttttttaatgacaccaacaacaatctttattataga 31283530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 39435011 - 39434956
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  39435011 aaaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattata 39434956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 104
Target Start/End: Complemental strand, 47901838 - 47901791
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  47901838 aaaatctaaattct-ttttttaatgacaccaacaacaatctttattata 47901791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 1787034 - 1786979
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttatta 102  Q
    |||| ||||| |||||||||| | |||||||||||||||||||||||| |||||||    
T  1787034 aaaatatatataatctaaattcttttttttaatgacaccaacaacaatttttatta 1786979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 25750923 - 25750869
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||    
T  25750923 aaaaaatataatctaaattct-ttttttaatgacaccaacaacaatctttattata 25750869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 36609854 - 36609889
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  36609854 ttttttaatgacaccaacaacaatctttattataga 36609889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 48624777 - 48624836
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| |||||||||||||| | | ||||| ||||||||||||| ||||||||||||||    
T  48624777 aaaaaaaataaaatctaaattctttgttttagtgacaccaacaacgatctttattataga 48624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 2475063 - 2475108
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||| | ||||||||||||||||||||| |||||||||||    
T  2475063 aatctaaattcttttttttaatgacaccaacaacgatctttattat 2475108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 21635421 - 21635377
Alignment:
Q  61 ctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||    
T  21635421 ctaaattat-ttttttaatgacactaacaacaatctttattataga 21635377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 25834633 - 25834577
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattatag 105  Q
    ||||| ||| |||||||||| | ||||||||||||| |||||||||||||||||||||    
T  25834633 aaaaaaatataatctaaattct-ttttttaatgacatcaacaacaatctttattatag 25834577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 39151866 - 39151810
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  39151866 aaaaaatataatctaaattct-ttttttaataacaccaacaacaatctttattataga 39151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 39389600 - 39389537
Alignment:
Q  46 caaaaaatataaaatctaaatt---atgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||||||||||   || |||||||||||||| |||||||||||||||||||||    
T  39389600 caaaaaaaatataatctaaattcttattttttttaatgacacaaacaacaatctttattataga 39389537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 10199278 - 10199318
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  10199278 ttattttttttaacgacaccaacaacaatctttattataga 10199318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 20055689 - 20055633
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| ||| |||||| | |||||||||||||| |||||||||||||||||||    
T  20055689 aaaaaaatataatttaaattcttttttttaatgacactaacaacaatctttattata 20055633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 46622394 - 46622426
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||||||||||||||||||    
T  46622394 ttttttaatgacaccaacaacaatctttattat 46622426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 16849085 - 16849120
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  16849085 ttttttaatgacatcaacaacaatctttattataga 16849120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 104
Target Start/End: Original strand, 21094027 - 21094062
Alignment:
Q  69 tgttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||| |||||||||||||||||||    
T  21094027 tgttttttaatgacacgaacaacaatctttattata 21094062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 27509698 - 27509663
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  27509698 ttttttaacgacaccaacaacaatctttattataga 27509663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 48103784 - 48103819
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  48103784 ttttttaatgacactaacaacaatctttattataga 48103819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 48525958 - 48525923
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  48525958 ttttttaacgacaccaacaacaatctttattataga 48525923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 105
Target Start/End: Original strand, 1748395 - 1748429
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatag 105  Q
    ||||||||||||| |||||||||||||||||||||    
T  1748395 ttttttaatgacatcaacaacaatctttattatag 1748429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 8390418 - 8390359
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattatagat 107  Q
    ||||||| ||| | |||||||||| ||||||||||||||||| |||||| ||||||||||||    
T  8390418 caaaaaaaatatattctaaattat-ttttttaatgacaccaataacaat-tttattatagat 8390359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 21305486 - 21305519
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||| |||||||||||||||||||||||    
T  21305486 ttttttaatggcaccaacaacaatctttattata 21305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 21766221 - 21766254
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||| |||||||||||||||||||||||||||||    
T  21766221 ttttataatgacaccaacaacaatctttattata 21766254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 789166 - 789198
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| ||||||||    
T  789166 tttttaatgacaccaacaacaatcattattata 789198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 4550387 - 4550331
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| ||| |||||| | | ||||||||||| ||||||||||||||||||||    
T  4550387 aaaaaaatataatttaaattctttattttaatgacatcaacaacaatctttattata 4550331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 7525866 - 7525834
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    ||||||||||||||||||||| |||||||||||    
T  7525866 ttttttaatgacaccaacaacgatctttattat 7525834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 10199656 - 10199703
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaat 94  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||||||    
T  10199656 caaaaaaaatataatctaaattct-ttttttaatgacaccaacaacaat 10199703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 20035023 - 20034991
Alignment:
Q  74 tttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| ||||||||||||||||||||||||    
T  20035023 tttaatgaaaccaacaacaatctttattataga 20034991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 20045434 - 20045402
Alignment:
Q  74 tttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| ||||||||||||||||||||||||    
T  20045434 tttaatgaaaccaacaacaatctttattataga 20045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 23653453 - 23653421
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| ||||||||    
T  23653453 tttttaatgacaccaacaacaatcattattata 23653421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 36251897 - 36251857
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||| |||| |||||||||||||||||||||    
T  36251897 ttattttttttaataacacaaacaacaatctttattataga 36251857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 20715910 - 20715853
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  20715910 aaaaaatataatctaaattcttttttttaatgacaccaacaacaatctttattataga 20715853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 32531194 - 32531144
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||||    
T  32531194 aaaatctaaattcttttttctaatgacaccaacaacaatctttattataga 32531144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 17353180 - 17353125
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| ||||||| ||   ||||||||||||||||||||||||||||||||||||    
T  17353180 aaaaatatataatctaattt---ttttttaatgacaccaacaacaatctttattataga 17353125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 14662352 - 14662387
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  14662352 ttttttaatgacaccaacaacaatctttattataga 14662387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 28712002 - 28712037
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  28712002 ttttttaatgacaccaacaacaatctttattataga 28712037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 21254503 - 21254561
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||||| | ||||| |||||||||||||||||||| |||||||    
T  21254503 aaaaaaatataatctaaattatttattttattgacaccaacaacaatctttcttataga 21254561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 14965294 - 14965254
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||||||||||||||| ||||||||||||||    
T  14965294 ttattttttttaatgacaccaacaaccatctttattataga 14965254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 22535467 - 22535515
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||| ||||||||||||| ||||||||||||||||||    
T  22535467 aatctaaattctttttcttaatgacaccaaaaacaatctttattataga 22535515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 7451731 - 7451766
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  7451731 ttttttaatgacgccaacaacaatctttattataga 7451766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 8771731 - 8771766
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||| |||||||||||||||    
T  8771731 ttttttaatgacaccaacaataatctttattataga 8771766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 10460180 - 10460145
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10460180 ttttttaatgacaccaacaacgatctttattataga 10460145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 12169906 - 12169941
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  12169906 ttttttaatgacaccaacaacgatctttattataga 12169941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 13698207 - 13698172
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||| ||||||||||||||||||    
T  13698207 ttttttaatgacaccaataacaatctttattataga 13698172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 23124449 - 23124414
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23124449 ttttttaatgacaccaacaacaatctttattttaga 23124414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 24062711 - 24062668
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttatt 101  Q
    |||||||||| | ||||||||||||||||||||| |||||||||    
T  24062711 aatctaaattcttttttttaatgacaccaacaacgatctttatt 24062668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 30254376 - 30254411
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  30254376 ttttttaatgacacaaacaacaatctttattataga 30254411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 31861922 - 31861864
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||| |||||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  31861922 aaaatatatataatctaaattct-ttttttaatgacaccaaaaacgatctttattataga 31861864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 33573397 - 33573362
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  33573397 ttttttaacgacaccaacaacaatctttattataga 33573362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 34638052 - 34638017
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  34638052 ttttttaatgacacaaacaacaatctttattataga 34638017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 106
Target Start/End: Complemental strand, 2485980 - 2485925
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||| |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  2485980 aaaaaatataatctaaattct-ttttttaatgacaccaacaacaat-tttattataga 2485925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 13240723 - 13240756
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| ||||||||||||||||||||    
T  13240723 ttttttaatgacatcaacaacaatctttattata 13240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 14426697 - 14426664
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| ||||||||||||||||||||    
T  14426697 ttttttaatgacatcaacaacaatctttattata 14426664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 26251959 - 26251988
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttat 100  Q
    ||||||||||||||||||||||||||||||    
T  26251959 ttttttaatgacaccaacaacaatctttat 26251988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 2441501 - 2441443
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||||||||||||||| |||||| |||||||||||    
T  2441501 caaaaaaaatataatctaaattct-ttttttaatgacaccaaaaacaat-tttattataga 2441443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 19146172 - 19146219
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||| |||| |||||||||||||||||    
T  19146172 aatctaaattct-ttttttaatgacatcaacgacaatctttattataga 19146219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 21104637 - 21104577
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||| |||||| | |||||| ||||||| || ||||||||||||||||||    
T  21104637 caaaaaaaatataatataaattctttttttttatgacacaaataacaatctttattataga 21104577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 32333306 - 32333338
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    ||||| |||||||||||||||||||||||||||    
T  32333306 tttttcaatgacaccaacaacaatctttattat 32333338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 34210068 - 34210116
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||  |||||| ||| ||||||||||| ||||||||||||    
T  34210068 aatctaaattattatttttattgagaccaacaacaacctttattataga 34210116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 27376335 - 27376383
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  27376335 aatctaaattcttttttttaatgacaccaacaacaatctttattataga 27376383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 96
Target Start/End: Complemental strand, 36927053 - 36927004
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatct 96  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  36927053 aaaaaatatataatctaaattcttttttttaatgacaccaacaacaatct 36927004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 46620623 - 46620683
Alignment:
Q  48 aaaaatataaaatctaaattatg--ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| |   ||||||||||||||||||||||||||||||||||||    
T  46620623 aaaaatatataatctaaattcttatttttttaatgacaccaacaacaatctttattataga 46620683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 5720405 - 5720461
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattat 103  Q
    |||| ||||| |||||||||||| ||| |||||||||| ||||||||||||||||||    
T  5720405 aaaatatatataatctaaattatttttcttaatgacactaacaacaatctttattat 5720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 160883 - 160848
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  160883 ttttttaatgacaccaacaacaatctttattataga 160848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 20702434 - 20702375
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| ||| |||||||||| | ||||| ||||||||||||||| ||||||||||||||    
T  20702434 aaaaaaaatataatctaaattctttttttcaatgacaccaacaacgatctttattataga 20702375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 36802616 - 36802651
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  36802616 ttttttaatgacaccaacaacaatctttattataga 36802651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 106
Target Start/End: Complemental strand, 41169234 - 41169188
Alignment:
Q  59 atctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||    
T  41169234 atctaaattat-ttttttaacgacaccaacaacaatctttattataga 41169188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 52954145 - 52954110
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  52954145 ttttttaatgacaccaacaacaatctttattataga 52954110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 13781553 - 13781495
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| | |||| ||||||||||||||| |||||||| ||||||    
T  13781553 aaaaatatataatctaaattcttttttataatgacaccaacaataatctttaatataga 13781495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 26007846 - 26007790
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  26007846 aaaaaaatataatctaaattat-ttttttaatgacaccaacaacaat-tttattataga 26007790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 35447680 - 35447714
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||||||||||||||    
T  35447680 tttttaatgacaccaacaacaatctttattataga 35447714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 2548498 - 2548435
Alignment:
Q  46 caaaaaatataaaatctaaa---ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||||||||   |||| ||||| ||||||||||||||||||||||||||||||    
T  2548498 caaaaaaaatataatctaaattattatttttttaaatgacaccaacaacaatctttattataga 2548435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 6196698 - 6196665
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  6196698 ttttttaatgacaccaacaacaatctttattata 6196665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 56085135 - 56085168
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  56085135 ttttttaatgacaccaacaacaatctttattata 56085168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 34409784 - 34409824
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  34409784 ttattttttttaatgacaccagcaacaatctttattataga 34409824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 47931360 - 47931392
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||||||||||||    
T  47931360 tttttaatgacaccaacaacaatctttattata 47931392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Complemental strand, 549077 - 549022
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| ||| |||||||||| | | ||||||||||| ||||||||||||||||||||    
T  549077 aaaaaatataatctaaattctttattttaatgacatcaacaacaatctttattata 549022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 1580037 - 1580072
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  1580037 ttttttaatgacatcaacaacaatctttattataga 1580072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 2133593 - 2133558
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  2133593 ttttttaacgacaccaacaacaatctttattataga 2133558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 2358695 - 2358660
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  2358695 ttttttaatgacaccaacaacaatttttattataga 2358660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 104
Target Start/End: Original strand, 19437295 - 19437326
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||    
T  19437295 ttttaatgacaccaacaacaatctttattata 19437326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 20702581 - 20702546
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20702581 ttttttaatgacaccaacaacgatctttattataga 20702546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 25458900 - 25458865
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25458900 ttttttaatgacaccaaaaacaatctttattataga 25458865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 26054473 - 26054508
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||| |||||||||||||||    
T  26054473 ttttttaatgacaccaacaaaaatctttattataga 26054508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 26427133 - 26427168
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26427133 ttttttaatgacaccaataacaatctttattataga 26427168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 28494952 - 28494917
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  28494952 ttttttaatcacaccaacaacaatctttattataga 28494917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 33145101 - 33145066
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33145101 ttttttaatgacaccaacaacgatctttattataga 33145066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 35595617 - 35595652
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  35595617 ttttttaatgacactaacaacaatctttattataga 35595652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 49574936 - 49574901
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  49574936 ttttttaatgacaccaacaacgatctttattataga 49574901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 50561233 - 50561268
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  50561233 ttttttaatgacaccaacaacaatttttattataga 50561268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 51400138 - 51400173
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| ||||||||||||||||||||||||||    
T  51400138 ttttttaataacaccaacaacaatctttattataga 51400173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 32006689 - 32006723
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| ||||||||||    
T  32006689 tttttaatgacaccaacaacaatcattattataga 32006723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 37143320 - 37143376
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  37143320 aaaaacatacaatctaaattct-ttttttaatgacaccaacaacaat-tttattataga 37143376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 594544 - 594577
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| ||||||||||||||||||||    
T  594544 ttttttaatgacatcaacaacaatctttattata 594577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 2478456 - 2478489
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||| |||||||||||||||||||    
T  2478456 ttttttaatgacactaacaacaatctttattata 2478489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 100
Target Start/End: Complemental strand, 4951590 - 4951561
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttat 100  Q
    ||||||||||||||||||||||||||||||    
T  4951590 ttttttaatgacaccaacaacaatctttat 4951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 4958897 - 4958957
Alignment:
Q  46 caaaaaatataaaatctaa-attatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| ||||||| ||| | ||||||||||| |||||||||||| |||||||||||    
T  4958897 caaaaaatatataatctaatatttttttttttaatgaaaccaacaacaat-tttattataga 4958957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 5662162 - 5662129
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| ||||||||||||||||||||    
T  5662162 ttttttaatgacatcaacaacaatctttattata 5662129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 7059414 - 7059381
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||| |||||||||||||||||||||||||    
T  7059414 ttttttaacgacaccaacaacaatctttattata 7059381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 19442735 - 19442768
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| |||||||||    
T  19442735 ttttttaatgacaccaacaacaatttttattata 19442768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 20818212 - 20818245
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||| ||||||||||||||||||||    
T  20818212 ttttttaatgacatcaacaacaatctttattata 20818245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 30503185 - 30503152
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||| |||||||||||||||||||||||||||||    
T  30503185 ttttgtaatgacaccaacaacaatctttattata 30503152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Complemental strand, 1397237 - 1397205
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||| ||||||||||||||    
T  1397237 ttttttaatgacaccaacgacaatctttattat 1397205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 2291039 - 2291098
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||| ||| | ||||||||||||| |||||||||||||| |||||||    
T  2291039 caaaaaacatataatctacatttt-ttttttaatgacatcaacaacaatctttgttataga 2291098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Complemental strand, 6488149 - 6488117
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| ||||||||    
T  6488149 tttttaatgacaccaacaacaatcattattata 6488117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 11064486 - 11064529
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaa 90  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||||    
T  11064486 caaaaaaaatataatctaaattat-ttttttaatgacaccaacaa 11064529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 26878612 - 26878668
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| ||| |||||| | |||| ||||||||||||||||||||||| |||||    
T  26878612 aaaaaaatataatataaattcttttttgtaatgacaccaacaacaatctttgttata 26878668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 27088557 - 27088511
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  27088557 aatctaaattct-ttttttaatgacaccaacaacaat-tttattataga 27088511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 46251331 - 46251276
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||    ||||||||||| ||||| ||||||||||||||||||    
T  46251331 aaaaatatataatctaaata---ttttttaatgataccaagaacaatctttattataga 46251276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 48419578 - 48419637
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| |||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  48419578 aaaaaatatataatctaaattcttttttttaatgataccaacaacgatctttattataga 48419637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 52043456 - 52043397
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||||||| || | |||||||||||||||||||| |||||||||||||||    
T  52043456 aaaaaatatataatctaattttttttttttaatgacaccaacaaaaatctttattataga 52043397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 12301093 - 12301035
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  12301093 aaaaagatataatctaaattcttttttttaatgacaccaacaacaatttttattataga 12301035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 24005042 - 24005099
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  24005042 aaaaaaatataatcaaaattat-ttttttaatgacaccaacaacaatctttattataga 24005099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 46880138 - 46880084
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttatta 102  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||||    
T  46880138 aaaaaaatataatctaaattcttttttttaatgacaccaacaacaatctttatta 46880084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 11345005 - 11344958
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  11345005 aatctaaattct-ttttttaatgacaccaacaacaatctttattataga 11344958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 11409037 - 11409002
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  11409037 ttttttaatgacaccaacaacaatctttattataga 11409002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 12267119 - 12267084
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  12267119 ttttttaatgacaccaacaacaatctttattataga 12267084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 13303997 - 13303962
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  13303997 ttttttaatgacaccaacaacaatctttattataga 13303962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 24561281 - 24561246
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  24561281 ttttttaatgacaccaacaacaatctttattataga 24561246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 27904337 - 27904392
Alignment:
Q  49 aaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| ||| ||||| |||| | ||||||||||||||||||||||||||||||||||    
T  27904337 aaaaaatataatctgaattcttttttttaatgacaccaacaacaatctttattata 27904392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 34969359 - 34969394
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  34969359 ttttttaatgacaccaacaacaatctttattataga 34969394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 36605512 - 36605547
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  36605512 ttttttaatgacaccaacaacaatctttattataga 36605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 40808771 - 40808806
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  40808771 ttttttaatgacaccaacaacaatctttattataga 40808806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 104
Target Start/End: Complemental strand, 1580694 - 1580656
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattata 104  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  1580694 ttattttttttaatgacaccaacaacaatctttattata 1580656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 104
Target Start/End: Complemental strand, 8096320 - 8096263
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||| ||| |||||||||| | |||||||||||||||||||||||| |||||||||    
T  8096320 caaaaaaaatataatctaaattcttttttttaatgacaccaacaacaat-tttattata 8096263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 21343952 - 21343918
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatag 105  Q
    |||||||||||||||||||||||||||||||||||    
T  21343952 ttttttaatgacaccaacaacaatctttattatag 21343918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 21348817 - 21348783
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatag 105  Q
    |||||||||||||||||||||||||||||||||||    
T  21348817 ttttttaatgacaccaacaacaatctttattatag 21348783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 33934127 - 33934185
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||| ||| ||||| |||| | ||||||||||||| ||||||||||||||||||||||    
T  33934127 aaaaaaatataatctcaattcttttttttaatgacatcaacaacaatctttattataga 33934185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 48420058 - 48420008
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  48420058 aaaatctaaattctttcttttaatgacaccaacaacgatctttattataga 48420008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 115872 - 115929
Alignment:
Q  48 aaaaatataaaatctaaattatgt-tttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| |||||||||| | | |||||||||||||||||||||||||||||||||    
T  115872 aaaaaaatataatctaaattctttatttttaatgacaccaacaacaatctttattata 115929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 31528687 - 31528654
Alignment:
Q  73 ttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||    
T  31528687 ttttaatgacaccaacaacaatctttattataga 31528654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 33193984 - 33193951
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  33193984 ttttttaatgacaccaacaacaatctttattata 33193951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 50943905 - 50943938
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  50943905 ttttttaatgacaccaacaacaatctttattata 50943938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 1531254 - 1531312
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||||||||||||||||||||| ||||||||||||    
T  1531254 caaaaaaaatataatctaaattct-ttttttaatgacaccaacaacaa-ctttattataga 1531312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 8574092 - 8574035
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||  ||||| | ||||||  ||||||||||||||||||||||||||||    
T  8574092 aaaaaatataaaat--aaattctttttttttgtgacaccaacaacaatctttattataga 8574035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 8699332 - 8699300
Alignment:
Q  74 tttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||||||||||||    
T  8699332 tttaatgacaccaacaacaatctttattataga 8699300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 40403490 - 40403430
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| |||||||| | |  |||||||||| ||||||||| ||||||||||||||    
T  40403490 caaaaaatatataatctaaaatcttgtttttaatgataccaacaacgatctttattataga 40403430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 13315108 - 13315143
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||||||||| |||||    
T  13315108 ttttttaatgacaccaacaacaatctttataataga 13315143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 13315236 - 13315271
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13315236 ttttttaatgataccaacaacaatctttattataga 13315271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 16424538 - 16424503
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||| ||||||||||    
T  16424538 ttttttaatgacaccaacaacaatccttattataga 16424503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 21335039 - 21335074
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||| |||||||||||||||||    
T  21335039 ttttttaatgacaccaacgacaatctttattataga 21335074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 25298107 - 25298072
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25298107 ttttttaatgacaccaacaacgatctttattataga 25298072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 33326784 - 33326819
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  33326784 ttttttaatgacaccaacaacaatatttattataga 33326819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 34748897 - 34748850
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatc 95  Q
    ||||| ||| |||||||||| | |||||||||||||||||||||||||    
T  34748897 aaaaaaatataatctaaattcttttttttaatgacaccaacaacaatc 34748850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 43575637 - 43575696
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| ||| ||||||||||   ||||||||||||||||||||  ||||||||||||||    
T  43575637 aaaaaaaatataatctaaattcacttttttaatgacaccaacaatgatctttattataga 43575696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 45943345 - 45943310
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||| |||||||||||||||||||||    
T  45943345 ttttttaatgacactaacaacaatctttattataga 45943310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 47576724 - 47576759
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||||| |||||||||||    
T  47576724 ttttttaatgacaccaacaacaatatttattataga 47576759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 23773357 - 23773418
Alignment:
Q  47 aaaaaatataaaatctaaattatgtttttt--aatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||| ||||||||  |||||  ||| ||||||||||||||||||||||||||    
T  23773357 aaaaaatatataatttaaattattatttttgtaataacaccaacaacaatctttattataga 23773418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 898967 - 898934
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| |||||||||    
T  898967 ttttttaatgacaccaacaacaatttttattata 898934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 12264946 - 12264913
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattatag 105  Q
    ||||||||||||| ||||||||||||||||||||    
T  12264946 tttttaatgacactaacaacaatctttattatag 12264913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 14386949 - 14386889
Alignment:
Q  48 aaaaatataaaatctaaattatgtttttt--aatgacaccaacaacaatctttattataga 106  Q
    ||||||||| |||||||||| |  |||||  ||||||| ||||||||||||||||||||||    
T  14386949 aaaaatatataatctaaattcttattttttgaatgacatcaacaacaatctttattataga 14386889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Original strand, 17236668 - 17236701
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||||||| |||||    
T  17236668 ttttttaatgacaccaacaacaatctttgttata 17236701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 21336283 - 21336202
Alignment:
Q  22 aaaatataatctaagttcttttgtcaaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||||||||  |   |||| | |  ||||||||| | ||||||||| ||||||||||||||| |||||||    
T  21336283 aaaatataatctaagttctttgcttgtaaaaaaaattatctaaattcttttttttaataacaccaacaacaatcgttattat 21336202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 31845170 - 31845126
Alignment:
Q  61 ctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||    
T  31845170 ctaaattcttttttttaatgacaccaacaacaat-tttattataga 31845126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 48995430 - 48995491
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttt-taatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | ||||| ||| || ||||||||||||||||||||||||    
T  48995430 caaaaaaaatataatctaaattttttttttataacgaaaccaacaacaatctttattataga 48995491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 49368345 - 49368312
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||| ||||||||||||||||||||||||||    
T  49368345 ttttttattgacaccaacaacaatctttattata 49368312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 11978303 - 11978243
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| ||||| |||| | ||||||||||||||||||||| || ||| |||||||    
T  11978303 caaaaaaaatataatctgaatttttttttttaatgacaccaacaacgattttttttataga 11978243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 12214144 - 12214176
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattat 103  Q
    |||||||||||||||| ||||||||||||||||    
T  12214144 ttttttaatgacaccagcaacaatctttattat 12214176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 94
Target Start/End: Original strand, 16143447 - 16143494
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaat 94  Q
    ||||||||||| ||| |||||| | ||||||||||||||||||||||||    
T  16143447 caaaaaatatataatttaaattct-ttttttaatgacaccaacaacaat 16143494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 104
Target Start/End: Original strand, 17579927 - 17579959
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||| ||||||||||||||||||||    
T  17579927 tttttaatgacatcaacaacaatctttattata 17579959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 25822149 - 25822181
Alignment:
Q  74 tttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||| |||||||||||||||||    
T  25822149 tttaatgacaccaacgacaatctttattataga 25822181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 37706032 - 37706078
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | |||||||||||||||||||||||| |||||||||||    
T  37706032 aatctaaattct-ttttttaatgacaccaacaacaat-tttattataga 37706078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 38619625 - 38619685
Alignment:
Q  47 aaaaaatataaaatctaaa-ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| |||||||| || | |||||||||||||| |||||| |||||| |||||||    
T  38619625 aaaaaatatataatctaaactttttttttttaatgacactaacaacgatctttgttataga 38619685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Original strand, 42589745 - 42589800
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| |||||||||||  |||| ||||||||| |||||||||||||||||||    
T  42589745 aaaaaaatataatctaaattagtttttgtaatgacac-aacaacaatctttattata 42589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 99
Target Start/End: Complemental strand, 44667788 - 44667760
Alignment:
Q  71 ttttttaatgacaccaacaacaatcttta 99  Q
    |||||||||||||||||||||||||||||    
T  44667788 ttttttaatgacaccaacaacaatcttta 44667760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 34966778 - 34966719
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | |||||||||||||||||||| |||||||||||||||    
T  34966778 caaaaaaaatataatctaaattct-ttttttaatgacaccaacaaaaatctttattataga 34966719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 1554827 - 1554792
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  1554827 ttttttaatgacaccaacaacaatctttattataga 1554792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 26536344 - 26536379
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||||||||    
T  26536344 ttttttaatgacaccaacaacaatctttattataga 26536379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 27020488 - 27020546
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  27020488 aaaaaatatataatctgaattat-ttttttaatgacaccaacaacgatctttattgtaga 27020546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 2692043 - 2692089
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  2692043 aatctaaattattattttgaatgacaccaacaacaatctttattata 2692089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 105
Target Start/End: Complemental strand, 24852530 - 24852496
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatag 105  Q
    |||||||||||||||||||||||||||||||||||    
T  24852530 ttttttaatgacaccaacaacaatctttattatag 24852496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 7020010 - 7019977
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  7020010 ttttttaatgacaccaacaacaatctttattata 7019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 11937872 - 11937839
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    ||||||||||||||||||||||||||||||||||    
T  11937872 ttttttaatgacaccaacaacaatctttattata 11937839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 45489051 - 45488994
Alignment:
Q  48 aaaaatataaaatctaaatt-atgttttttaatgacaccaacaacaatctttattata 104  Q
    ||||| ||| |||||||||| || |||||||||||||||||||||||| |||||||||    
T  45489051 aaaaaaatataatctaaatttattttttttaatgacaccaacaacaatttttattata 45488994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 18638277 - 18638233
Alignment:
Q  62 taaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| | ||||||||||||| ||||||||||||||||||||||    
T  18638277 taaattcttttttttaatgacatcaacaacaatctttattataga 18638233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 18918323 - 18918370
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||||||||    
T  18918323 aatctaaattat-ttttttaatgacatcaacaacgatctttattataga 18918370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 100
Target Start/End: Complemental strand, 23085537 - 23085494
Alignment:
Q  56 aaaatctaaattatgttttttaatgacaccaacaacaatctttat 100  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  23085537 aaaatctaaattat-ttttttaataacaccaacaacaatctttat 23085494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 288824 - 288789
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  288824 ttttttaatgacaccgacaacaatctttattataga 288789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 1170559 - 1170524
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1170559 ttttttaatgacaccaacaacaatctttattgtaga 1170524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 1566289 - 1566254
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||| |||||||||||||||||||||||    
T  1566289 ttttttaatgacgccaacaacaatctttattataga 1566254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 3739633 - 3739598
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3739633 ttttttaatgacaccaacaacaacctttattataga 3739598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 4418455 - 4418420
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  4418455 ttttttaatgacatcaacaacaatctttattataga 4418420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 94
Target Start/End: Original strand, 8522554 - 8522601
Alignment:
Q  47 aaaaaatataaaatctaaattatgttttttaatgacaccaacaacaat 94  Q
    ||||| |||| |||||||||| | ||||||||||||||||||||||||    
T  8522554 aaaaattatataatctaaatttttttttttaatgacaccaacaacaat 8522601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 15919565 - 15919600
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||||||||||||||| |||||||||||||    
T  15919565 ttttttaatgacaccaacaacattctttattataga 15919600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Original strand, 18994712 - 18994755
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttatt 101  Q
    |||||||||| | |||||||||||||||||||| ||||||||||    
T  18994712 aatctaaattcttttttttaatgacaccaacaataatctttatt 18994755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 28205488 - 28205453
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  28205488 ttttttaatgacatcaacaacaatctttattataga 28205453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 41666768 - 41666803
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||| ||||||||    
T  41666768 ttttttaatgacaccaacaacaatcttaattataga 41666803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 41942499 - 41942534
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||| ||||||||||||||||||||    
T  41942499 ttttttaatgacacccacaacaatctttattataga 41942534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 5182663 - 5182697
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||| |||||||||||||||    
T  5182663 tttttaatgacaccaacaataatctttattataga 5182697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 104
Target Start/End: Complemental strand, 15898823 - 15898790
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattata 104  Q
    |||||||||||||||||||||||| |||||||||    
T  15898823 ttttttaatgacaccaacaacaatttttattata 15898790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 106
Target Start/End: Complemental strand, 25722847 - 25722818
Alignment:
Q  77 aatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||||||||||||||||||||    
T  25722847 aatgacaccaacaacaatctttattataga 25722818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 107
Target Start/End: Original strand, 15044276 - 15044335
Alignment:
Q  46 caaaaaatataaaatctaaattatgtttt-ttaatgacaccaacaacaatctttattatagat 107  Q
    ||||||||||| |||||||||| | |||| ||||||||||   ||||||||||||||||||||    
T  15044276 caaaaaatatataatctaaattctttttttttaatgacac---caacaatctttattatagat 15044335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 27837627 - 27837575
Alignment:
Q  48 aaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttat 100  Q
    ||||| ||| ||| |||||| | |||||||||||| |||||||||||||||||    
T  27837627 aaaaaaatataatttaaattcttttttttaatgaccccaacaacaatctttat 27837575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 34180112 - 34180072
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| ||||||||| |||| |||||||||||||||||||||    
T  34180112 ttattttttttaataacactaacaacaatctttattataga 34180072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 21652 - 21612
Alignment:
Q  66 ttatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  21652 ttattttttttaacgacaccaacaacaatctttattataga 21612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 8706 - 8754
Alignment:
Q  58 aatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  8706 aatctaaatttttttttttaatgaaatcaacaacaatctttattataga 8754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 106
Target Start/End: Original strand, 6919 - 6978
Alignment:
Q  46 caaaaaatataaaatctaaattatgttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||| ||| |||||||||| | |||||||||||| |||||||||||||||| ||||||    
T  6919 caaaaaaaatataatctaaattct-ttttttaatgacgccaacaacaatctttactataga 6978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 71 - 107
Target Start/End: Complemental strand, 16639 - 16603
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattatagat 107  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16639 ttttttaatgacaccaacaacaatcgttattatagat 16603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 395 - 430
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    |||||||| |||||||||||||||||||||||||||    
T  395 ttttttaacgacaccaacaacaatctttattataga 430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Complemental strand, 14804 - 14769
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14804 ttttttaatgacatcaacaacaatctttattataga 14769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 102
Target Start/End: Complemental strand, 44305 - 44274
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttatta 102  Q
    ||||||||||||||||||||||||||||||||    
T  44305 ttttttaatgacaccaacaacaatctttatta 44274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 106
Target Start/End: Original strand, 41563 - 41598
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttattataga 106  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41563 ttttttaatgacaacaacaacaatctttattataga 41598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 4884 - 4850
Alignment:
Q  72 tttttaatgacaccaacaacaatctttattataga 106  Q
    |||||| ||||||||||||||||||||||||||||    
T  4884 tttttattgacaccaacaacaatctttattataga 4850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 100
Target Start/End: Original strand, 563 - 592
Alignment:
Q  71 ttttttaatgacaccaacaacaatctttat 100  Q
    ||||||||||||||||||||||||||||||    
T  563 ttttttaatgacaccaacaacaatctttat 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University