View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF21162_low_13 (Length: 270)
Name: NF21162_low_13
Description: NF21162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF21162_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 257
Target Start/End: Original strand, 43132130 - 43132369
Alignment:
| Q |
18 |
catacaactcaagtgatttcgaacctgctgcacccgtcgaaattgcatccagatacaaccctacatcaagtcccgctttgtgtgcatacaccatcccttc |
117 |
Q |
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| T |
43132130 |
catacaactcaagtgatttcgaacctgctgcacccgtcgaaattgcatccagatacaaccctacatcaagtcccgctttgtgtgcatacaccatcccttc |
43132229 |
T |
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| Q |
118 |
cactaaccctaccattgttgaagctatcgttatctgattcgctagcttcgcgaattgaccttttccactagttcccatgtagttcactttccccaatgat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43132230 |
cactaaccctaccattgttgaagctatcgttatctgattcgctagcttcacgaattgaccttttccactagttcccatgtagttcactttccccaatgat |
43132329 |
T |
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| Q |
218 |
gaaaacaatggggaaagttttttcacgattgattcatctc |
257 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
43132330 |
gaaaacaatggggaaagttttttcacgattgattcatctc |
43132369 |
T |
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