View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF21163_high_57 (Length: 270)

Name: NF21163_high_57
Description: NF21163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF21163_high_57
NF21163_high_57
[»] chr3 (10 HSPs)
chr3 (16-270)||(40709212-40709465)
chr3 (75-270)||(4957611-4957807)
chr3 (24-127)||(50385266-50385372)
chr3 (154-229)||(6130650-6130725)
chr3 (156-269)||(16930323-16930436)
chr3 (180-270)||(43107858-43107948)
chr3 (184-267)||(50385150-50385233)
chr3 (75-116)||(43106641-43106682)
chr3 (31-75)||(4957770-4957814)
chr3 (161-263)||(21079191-21079292)
[»] chr5 (6 HSPs)
chr5 (20-265)||(28283495-28283739)
chr5 (154-224)||(37508965-37509035)
chr5 (162-267)||(5862729-5862834)
chr5 (75-133)||(12665336-12665394)
chr5 (80-133)||(1669792-1669845)
chr5 (20-75)||(12665318-12665373)
[»] chr2 (13 HSPs)
chr2 (20-267)||(19090141-19090387)
chr2 (20-270)||(30378328-30378575)
chr2 (75-270)||(30618043-30618237)
chr2 (160-267)||(15609720-15609827)
chr2 (75-133)||(30660141-30660199)
chr2 (154-265)||(17913867-17913978)
chr2 (157-235)||(13293582-13293660)
chr2 (22-75)||(30660125-30660178)
chr2 (24-75)||(30618029-30618080)
chr2 (189-267)||(12016847-12016925)
chr2 (164-246)||(16399693-16399775)
chr2 (154-233)||(16349996-16350076)
chr2 (157-213)||(40355599-40355655)
[»] chr4 (20 HSPs)
chr4 (20-133)||(23426995-23427108)
chr4 (20-267)||(1180107-1180353)
chr4 (75-270)||(51084558-51084753)
chr4 (158-267)||(21680541-21680649)
chr4 (75-270)||(54234425-54234618)
chr4 (74-270)||(33880851-33881043)
chr4 (154-265)||(33686613-33686724)
chr4 (79-268)||(5382224-5382413)
chr4 (154-226)||(39939107-39939179)
chr4 (25-75)||(33881005-33881055)
chr4 (161-213)||(15521732-15521784)
chr4 (161-269)||(35593850-35593957)
chr4 (162-270)||(47681660-47681768)
chr4 (85-127)||(40711781-40711823)
chr4 (21-75)||(51084541-51084595)
chr4 (184-270)||(52254826-52254912)
chr4 (20-73)||(5382382-5382435)
chr4 (157-222)||(20452606-20452671)
chr4 (197-250)||(35452034-35452087)
chr4 (167-259)||(23484338-23484430)
[»] chr6 (8 HSPs)
chr6 (26-250)||(17314227-17314451)
chr6 (20-133)||(29426952-29427064)
chr6 (177-233)||(14265797-14265853)
chr6 (181-248)||(23103098-23103165)
chr6 (79-133)||(14265704-14265758)
chr6 (166-211)||(15973838-15973883)
chr6 (190-235)||(24610606-24610651)
chr6 (187-235)||(4450695-4450743)
[»] scaffold0004 (2 HSPs)
scaffold0004 (20-116)||(34032-34128)
scaffold0004 (154-249)||(35193-35288)
[»] chr8 (7 HSPs)
chr8 (20-132)||(42280167-42280279)
chr8 (157-266)||(27418709-27418818)
chr8 (189-267)||(42281202-42281280)
chr8 (165-251)||(13582651-13582737)
chr8 (99-133)||(14266218-14266252)
chr8 (156-213)||(14266141-14266198)
chr8 (162-218)||(40084371-40084427)
[»] chr1 (11 HSPs)
chr1 (96-270)||(13142794-13142967)
chr1 (76-268)||(2753047-2753237)
chr1 (175-270)||(31375049-31375144)
chr1 (174-265)||(51960329-51960420)
chr1 (154-235)||(32018673-32018755)
chr1 (183-227)||(44836060-44836104)
chr1 (59-133)||(33710561-33710634)
chr1 (74-133)||(42069570-42069629)
chr1 (23-72)||(2753204-2753253)
chr1 (154-241)||(44327344-44327431)
chr1 (162-232)||(25690161-25690231)
[»] chr7 (8 HSPs)
chr7 (100-265)||(9823499-9823663)
chr7 (100-265)||(10725424-10725588)
chr7 (162-266)||(32521128-32521232)
chr7 (58-119)||(31932941-31933002)
chr7 (154-267)||(35224746-35224860)
chr7 (175-231)||(15962539-15962596)
chr7 (161-249)||(22807850-22807938)
chr7 (162-235)||(9047356-9047428)
[»] scaffold0369 (1 HSPs)
scaffold0369 (164-266)||(10565-10667)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-121; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 40709465 - 40709212
Alignment:
Q  16 atcgtgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagta 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40709465 atcgtgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagta 40709366  T
Q  116 tatataattacaaatatacaggtcggcttgttggcctatagtaggc-ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagt 214  Q
    ||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40709365 tatataattacaaatatacaggtcggcttgttggcc--tagtaggctttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaaat 40709268  T
Q  215 ttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    ||||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  40709267 ttgagcctaacctatttaataaatgagctaagtcgagtcggactttaagtaggccg 40709212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 75 - 270
Target Start/End: Complemental strand, 4957807 - 4957611
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatata--attacaaatatacaggtcggcttgtt-ggcctatagtaggcttttttataa 171  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||  |||||| || ||  ||||||| || | ||||||  |||||||||| |||||    
T  4957807 attttgtagaggctcatacgcgtgtattatataatgtagtatatatataattacacatctatgggtcggcctgataggccta--gtaggcttttctataa 4957710  T
Q  172 gtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    | ||||| ||  |||||||||||||| || |||||||||||| || ||||| |||||||||||| | || |||||||||| |||| ||| |||||||||    
T  4957709 gccttagcctagcctatttaaattaacgaactttttaaaaagcttaagccttacctatttaataaacgaactaggccgagccggaattttagtaggccg 4957611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 127
Target Start/End: Complemental strand, 50385372 - 50385266
Alignment:
Q  24 gagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataat---gtagtatatat 120  Q
    |||||| ||| || |||||||||||||||||||  || || |||| |||||||||| |||||| |||||| |||||||||||||||   |||||||||||    
T  50385372 gagctaacacgtccattttgtagaggctaatacatgtatactataaaatgtattttatagaggttaatacgcgtgtattatataatatagtagtatatat 50385273  T
Q  121 aattaca 127  Q
    |||||||    
T  50385272 aattaca 50385266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 6130725 - 6130650
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctat 229  Q
    |||||| ||||| |||||| |||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||    
T  6130725 tagtagacttttctataagccttagtctaacctatttaaattaatgaactttttaaaaagcttgagcttaacctat 6130650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 16930436 - 16930323
Alignment:
Q  156 gtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcgg 255  Q
    |||||||||| |||||| ||| | | ||||||| ||||||||  | |||||| ||||| ||||||||||||||| ||||| | ||| || |||||||| |    
T  16930436 gtaggcttttctataagcctttgcccgacctatataaattaacaaactttttgaaaagcttgagcctaacctatataataaacgagttaagccgagtcag 16930337  T
Q  256 actttaagtaggcc 269  Q
    ||||||||||||||    
T  16930336 actttaagtaggcc 16930323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 43107858 - 43107948
Alignment:
Q  180 ctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    |||||||||||||||||||||  ||||||||||| ||||||  ||| ||||||||| | ||| ||||||||| ||  ||||||||||||||    
T  43107858 ctgacctatttaaattaatgaattttttaaaaagcttgagctcaacttatttaataaacgagttaggccgagccgatctttaagtaggccg 43107948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 50385233 - 50385150
Alignment:
Q  184 cctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtagg 267  Q
    ||||||||||||||||| |||||||||||  ||||| ||||||||||||||| | ||| |||| |||| ||  |||||||||||    
T  50385233 cctatttaaattaatgagctttttaaaaaacttgagtctaacctatttaataaacgagttaggtcgagccgagctttaagtagg 50385150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 43106641 - 43106682
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtat 116  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  43106641 attttatagaagctaatacacgtgtattatataatgtagtat 43106682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 4957814 - 4957770
Alignment:
Q  31 cacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||    
T  4957814 cacatccattttgtagaggctcatacgcgtgtattatataatgta 4957770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 21079191 - 21079292
Alignment:
Q  161 cttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggacttt 260  Q
    |||||||||||||||||| |||| || ||||||||||||| |||| |||||  | ||||  |||| |||||| || || || ||  ||||||||||||||    
T  21079191 cttttttataagtcttagcctga-ctttttaaattaatgaactttctaaaatatatgagtttaacgtatttactaaattagttattccgagtcggacttt 21079289  T
Q  261 aag 263  Q
    |||    
T  21079290 aag 21079292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 265
Target Start/End: Original strand, 28283495 - 28283739
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    |||||||||| |||||| ||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  28283495 tgtagagctaacacatccattttatagaggctaatacacgtgtattataaaatgtattttatagaggctaatacgcgtgcattatataatgtagtatata 28283594  T
Q  120 taattacaaatatacaggtcgg-cttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttga 218  Q
    |||||||| ||||| |||| || ||  | ||||  |||||||||||| |||||| ||||| ||  ||||||||||| ||||| |||||||||||  ||||    
T  28283595 taattacatatatataggttggtctgataggcc--tagtaggcttttctataagccttagcctagcctatttaaataaatgaactttttaaaaaacttga 28283692  T
Q  219 gcctaacctatttaatacatgagctaggccgagtcggactttaagta 265  Q
    |||| |||||||||||| | ||||||||||||| ||| |||||||||    
T  28283693 gccttacctatttaataaacgagctaggccgagccgggctttaagta 28283739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 37509035 - 37508965
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaa 224  Q
    |||||||||||| ||||| |||||| ||| |||||||||||||| || |||||||||||||||||||||||    
T  37509035 tagtaggcttttctataaatcttagcctggcctatttaaattaacgaactttttaaaaagtttgagcctaa 37508965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 267
Target Start/End: Complemental strand, 5862834 - 5862729
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggacttta 261  Q
    ||||||||||| | ||| ||||| ||||||||||||||| |||||||| |||| ||| |||||| ||||||||| | ||| ||||| |||| | ||||||    
T  5862834 ttttttataagccatagcctgacttatttaaattaatgagctttttaacaagtctgaacctaacatatttaataaacgagttaggctgagtagaacttta 5862735  T
Q  262 agtagg 267  Q
    ||||||    
T  5862734 agtagg 5862729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 12665336 - 12665394
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    |||||| | |||||||||||||||||||||||||||||||  ||||||||||| |||||    
T  12665336 attttgcataggctaatacacgtgtattatataatgtagttaatataattacacatata 12665394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 1669845 - 1669792
Alignment:
Q  80 gtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  1669845 gtagaagctaataaacgtgtattatataatggagtatatataattacacatata 1669792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 12665318 - 12665373
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    ||||| |||| |||||| |||||| | |||||||||| ||||||||||||||||||    
T  12665318 tgtagggctaacacatccattttgcataggctaatacacgtgtattatataatgta 12665373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 20 - 267
Target Start/End: Original strand, 19090141 - 19090387
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    ||||||||||  ||||| ||||||||||||||||||  ||||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||| |    
T  19090141 tgtagagctaatacatccattttgtagaggctaatatacgtgtattataaaatgtattttatagaggctaatacgagtgtattatataatgtagtataca 19090240  T
Q  120 taattacaaatatacaggtcggcttg-ttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttga 218  Q
    |||||||| |||||  |||| || || | ||||  |||||||||||| |||| | | ||| ||  ||||||||||||||||| |||||||||||| ||||    
T  19090241 taattacacatatatgggtcagcctgataggcc--tagtaggcttttctatatgccctagcctagcctatttaaattaatgaactttttaaaaagcttga 19090338  T
Q  219 gcctaacctatttaatacatgagctaggccgagtcggactttaagtagg 267  Q
    |||| |||||||||||| | |||||| |||||| ||| |||||||||||    
T  19090339 gccttacctatttaataaacgagctacgccgagccgggctttaagtagg 19090387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 30378575 - 30378328
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    |||||||||| |||||| || |||||||||||||||| ||||||||||| |||||||||| ||||||||||||  ||| |||||||||||||||||||||    
T  30378575 tgtagagctaacacatccatattgtagaggctaatacgcgtgtattataaaatgtattttatagaggctaatatgcgtatattatataatgtagtatata 30378476  T
Q  120 taattacaaatatacaggtcggcttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgag 219  Q
    |||||||| |||||  || || | || | |  | ||||| |||||| |||||| ||||  ||  ||||||||||||||||| |||||| ||||| |||||    
T  30378475 taattacacatatatgggccgacctgatag-gtttagta-gcttttctataagccttatcctagcctatttaaattaatgagcttttt-aaaagcttgag 30378379  T
Q  220 cctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
     ||||| ||||||||| | ||  ||||||||| ||  ||||||||||||||    
T  30378378 tctaacttatttaatatacgaattaggccgagccgagctttaagtaggccg 30378328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 30618043 - 30618237
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatatacaggtcggcttgttggcctatagtaggcttttttataagtc 174  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||   | || | || | | || ||||||| |||| |||||       
T  30618043 attttgtagaggctaatacgcgtgtattatataatgtaatatatataattacacatatatgcgccgacctgataggct-tagtaggtttttctataaaca 30618141  T
Q  175 ttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    |||   ||||| |||||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||||| ||  |  ||||||||||||||    
T  30618142 ttaacatgacccatttaaattaataagctttttaaaaagcttgagcctaacctatttaataaatgagctaggcctagctgagctttaagtaggccg 30618237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 267
Target Start/End: Original strand, 15609720 - 15609827
Alignment:
Q  160 gcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactt 259  Q
    |||||| |||||  ||||| ||||||||||||||||| ||  |||||||||||| ||||||||||||||||||||| |||||  |||||||   || |||    
T  15609720 gcttttctataacccttagactgacctatttaaattattgtgctttttaaaaagcttgagcctaacctatttaatagatgagtaaggccgaactggcctt 15609819  T
Q  260 taagtagg 267  Q
    ||||||||    
T  15609820 taagtagg 15609827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 30660141 - 30660199
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  30660141 attttgtagaggctaatacgcgtgtattatataatgtaatatatataattacacatata 30660199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 265
Target Start/End: Original strand, 17913867 - 17913978
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtc 253  Q
    ||||||| |||| |||||| ||||  ||  ||||||||||||||| | |||||||||||| ||||| || |||||||||||| | ||| ||||||||| |    
T  17913867 tagtaggtttttctataagccttaacctagcctatttaaattaataaactttttaaaaagcttgagtcttacctatttaataaaggagttaggccgagcc 17913966  T
Q  254 ggactttaagta 265  Q
    |  |||||||||    
T  17913967 gagctttaagta 17913978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 13293660 - 13293582
Alignment:
Q  157 taggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaata 235  Q
    ||||||| | |||||| ||||  |||| || ||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  13293660 taggcttgtctataagccttaacctgatctgtttaaattaatgagctttttaaaaagtttgaccctaatctatttaata 13293582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 30660125 - 30660178
Alignment:
Q  22 tagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    |||||||| || ||| ||||||||||||||||||| ||||||||||||||||||    
T  30660125 tagagctaacaaatccattttgtagaggctaatacgcgtgtattatataatgta 30660178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 30618029 - 30618080
Alignment:
Q  24 gagctagcacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    |||||| || ||| ||||||||||||||||||| ||||||||||||||||||    
T  30618029 gagctaacaaatccattttgtagaggctaatacgcgtgtattatataatgta 30618080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 12016847 - 12016925
Alignment:
Q  189 ttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtagg 267  Q
    |||||||||| | |||||||||||| || || |||  |||||||||| |||||||| |||||| |||||||||| ||||    
T  12016847 ttaaattaataatctttttaaaaagcttaagtctagtctatttaataaatgagctaagccgagccggactttaaatagg 12016925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 246
Target Start/End: Complemental strand, 16399775 - 16399693
Alignment:
Q  164 ttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctagg 246  Q
    |||||||||| ||| |||||| ||||||||||| |   |||| |||||||||| |||||||| ||||||||| ||||| ||||    
T  16399775 ttttataagtattaatctgacatatttaaattagttgactttctaaaaagtttaagcctaacatatttaataaatgagttagg 16399693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 233
Target Start/End: Original strand, 16349996 - 16350076
Alignment:
Q  154 tagtaggcttttt-tataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaa 233  Q
    ||||||||||||| |||||||||||   |||||||||||||||||| || |||| || ||| ||||| ||||| |||||||    
T  16349996 tagtaggctttttgtataagtcttaacttgacctatttaaattaataacattttgaataagcttgagtctaacgtatttaa 16350076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 213
Target Start/End: Complemental strand, 40355655 - 40355599
Alignment:
Q  157 taggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaag 213  Q
    |||||||||||||||| || ||||||||||| |||||||| |   ||||||||||||    
T  40355655 taggcttttttataagcctaagtctgacctaattaaattagtaggctttttaaaaag 40355599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 1e-43; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 23427108 - 23426995
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  23427108 tgtagagctagcacatccattttgtagaggttaatacgcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataacgtaatatata 23427009  T
Q  120 taattacaaatata 133  Q
    |||||||| |||||    
T  23427008 taattacacatata 23426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 20 - 267
Target Start/End: Complemental strand, 1180353 - 1180107
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    ||||||| || |||||  |||||||| |||||||||| | ||||||||| |||||||||| |||||| |||||   ||||||||||||||||||||||||    
T  1180353 tgtagagttaacacattcattttgtaaaggctaatacgcctgtattataaaatgtattttatagaggttaatatgagtgtattatataatgtagtatata 1180254  T
Q  120 taattacaaatatacaggtcgg-cttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttga 218  Q
    || ||||| |||||  |||||| ||  | ||||  |||||| ||||| |||||| ||||||||  ||||||||||||||||| |||||||||||| ||||    
T  1180253 tatttacacatatatgggtcggtctgataggcc--tagtagacttttctataagccttagtctagcctatttaaattaatgaactttttaaaaagcttga 1180156  T
Q  219 gcctaacctatttaatacatgagctaggccgagtcggactttaagtagg 267  Q
    |  | |||||||||||| | ||| |||  ||||| ||||||||||||||    
T  1180155 gtattacctatttaataaacgagttagatcgagttggactttaagtagg 1180107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 51084558 - 51084753
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatataa-ttacaaatatacaggtcggcttgtt-ggcctatagtaggcttttttataag 172  Q
    ||||||||||||  |||||  ||||||| ||||||||||||||||||| ||| | |||||   | ||||| | | ||||||  |||||||||| ||||||    
T  51084558 attttgtagaggtcaatacgtgtgtattgtataatgtagtatatataaattatacatatatgagccggctagataggccta--gtaggcttttctataag 51084655  T
Q  173 tcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
     || || ||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||||| ||| ||| | ||||||||||||    
T  51084656 cctgagcctagcctatttaaattaatgagctttttaaaaagcttgagcctaacctatttaataaacgagctaggctgagccgggcattaagtaggccg 51084753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 21680541 - 21680649
Alignment:
Q  158 aggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggac 257  Q
    |||||||| |||||||||||  ||||||||||||||||||| |  ||||||||| | |||| |||||||||| ||||| | || ||||||||||||||||    
T  21680541 aggcttttatataagtcttaacctgacctatttaaattaataagttttttaaaa-gcttgatcctaacctatataataaaagaactaggccgagtcggac 21680639  T
Q  258 tttaagtagg 267  Q
    ||||||||||    
T  21680640 tttaagtagg 21680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 270
Target Start/End: Original strand, 54234425 - 54234618
Alignment:
Q  75 attttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatatacaggtcggcttgtt-ggcctatagtaggcttttttataagt 173  Q
    ||||||||||||  ||||   ||||||| |||||||||||||||||||||||| |||||   | || || | | ||||||  |||||||||| ||||||     
T  54234425 attttgtagaggtcaatatgtgtgtattgtataatgtagtatatataattacacatatatgagccgactagataggccta--gtaggcttttctataagc 54234522  T
Q  174 cttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    || |||||| ||||||||| ||||||| |||||||||||| ||||||  ||||||||||| | ||||||||   |||||||  ||||||||||||||    
T  54234523 ctcagtctggcctatttaa-ttaatgagctttttaaaaagcttgagctaaacctatttaaaaaatgagctacatcgagtcgagctttaagtaggccg 54234618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 270
Target Start/End: Complemental strand, 33881043 - 33880851
Alignment:
Q  74 tattttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatatacaggtcggcttgtt-ggcctatagtaggcttttttataag 172  Q
    ||||||||||||| |||||| |||||||||||||||||| |||||||   |||| ||| |  |  || |||| | ||||||  ||||| |||| || |||    
T  33881043 tattttgtagaggttaatacgcgtgtattatataatgtaatatatat---tacacatacatggaccgacttgataggccta--gtaggtttttctacaag 33880949  T
Q  173 tcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
      |||| || |||||||| || |||||| |||||||||||||||||||||||| ||||||||| | ||| |||||||| || | ||||||||||||||    
T  33880948 cgttagcctaacctattttaaataatgagctttttaaaaagtttgagcctaacatatttaataaacgagttaggccgaatcaggctttaagtaggccg 33880851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 33686724 - 33686613
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtc 253  Q
    |||||||||||||||||||| ||||||||||| |||||||||| | |  ||||||||||| ||||| ||||||||| ||||| |  || || |  |||||    
T  33686724 tagtaggcttttttataagttttagtctgacccatttaaattattaaattttttaaaaagcttgagtctaacctatataataaacaagttaagttgagtc 33686625  T
Q  254 ggactttaagta 265  Q
    ||||||||||||    
T  33686624 ggactttaagta 33686613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 268
Target Start/End: Complemental strand, 5382413 - 5382224
Alignment:
Q  79 tgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatatacaggtcgg-cttgttggcctatagtaggcttttttataagtctta 177  Q
    |||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||  || ||| || || ||||   ||||||||||| |||||| ||||    
T  5382413 tgtagaggctaataaacgtgtattttataatggaatatatataattacatatata-tggccggtctggtaggcc--cagtaggcttttctataagcctta 5382317  T
Q  178 gtctgacctatttaaattaa--tgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggc 268  Q
      ||  ||||||||||||||   ||  ||||||||||| ||||||||||| ||||||| | | ||| ||||||||| ||  |||||| |||||    
T  5382316 acctagcctatttaaattaacgcgagttttttaaaaagcttgagcctaacttatttaacaaacgagttaggccgagccgagctttaaataggc 5382224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 226
Target Start/End: Original strand, 39939107 - 39939179
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacc 226  Q
    |||||||||||  || ||| |||||| ||||||||||||||||||||  ||||||||| |||||| |||||||    
T  39939107 tagtaggctttcctacaagacttagtttgacctatttaaattaatgagttttttaaaatgtttgaacctaacc 39939179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 33881055 - 33881005
Alignment:
Q  25 agctagcacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    |||||||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  33881055 agctagcaaatctattttgtagaggttaatacgcgtgtattatataatgta 33881005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 213
Target Start/End: Original strand, 15521732 - 15521784
Alignment:
Q  161 cttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaag 213  Q
    ||||||||||||||| ||||||||||| ||||||||||   ||||||||||||    
T  15521732 cttttttataagtctaagtctgacctaattaaattaataggctttttaaaaag 15521784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 269
Target Start/End: Complemental strand, 35593957 - 35593850
Alignment:
Q  161 cttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggacttt 260  Q
    ||||| ||||||||||||| |||||| || ||||| |||| | |||||||||| || |||| ||||||| ||||| | |||  ||||| | |||| ||||    
T  35593957 cttttctataagtcttagtttgacctcttaaaattgatgagc-ttttaaaaagcttcagccaaacctatataataaacgagagaggccaattcgggcttt 35593859  T
Q  261 aagtaggcc 269  Q
    |||||||||    
T  35593858 aagtaggcc 35593850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 47681768 - 47681660
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggacttta 261  Q
    ||||||||||| || || |||||||| ||||||||||   |||||||||||  |  ||| | ||| ||||| || | ||||||||||||| ||||||||     
T  47681768 ttttttataagcctaagcctgacctaattaaattaatagactttttaaaaatctcaagcttgacccatttattaaacgagctaggccgagccggactttt 47681669  T
Q  262 agtaggccg 270  Q
    |||||||||    
T  47681668 agtaggccg 47681660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Complemental strand, 40711823 - 40711781
Alignment:
Q  85 ggctaatacacgtgtattatataatgtagtatatataattaca 127  Q
    |||||||| || |||||||||||| ||||||||||||||||||    
T  40711823 ggctaatagacatgtattatataacgtagtatatataattaca 40711781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 75
Target Start/End: Original strand, 51084541 - 51084595
Alignment:
Q  21 gtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgta 75  Q
    |||||||||||||||| ||||||||||||  |||||  ||||||| |||||||||    
T  51084541 gtagagctagcacatccattttgtagaggtcaatacgtgtgtattgtataatgta 51084595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 270
Target Start/End: Complemental strand, 52254912 - 52254826
Alignment:
Q  184 cctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    ||||||||||||||||| |||| ||||||| |||||  |||||| ||||||| |  |  ||||||||| | ||||||| ||||||||    
T  52254912 cctatttaaattaatgagctttataaaaagcttgagtttaacctgtttaataaacaaattaggccgagccagactttaggtaggccg 52254826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 5382435 - 5382382
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatg 73  Q
    |||||| |||||||||| ||| ||||||||||||||  |||||||| |||||||    
T  5382435 tgtagacctagcacatccattgtgtagaggctaataaacgtgtattttataatg 5382382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 20452671 - 20452606
Alignment:
Q  157 taggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcct 222  Q
    |||||||||||||||| ||||| |||||||||||| || |||   |||| ||||||| ||||||||    
T  20452671 taggcttttttataagccttagcctgacctatttatataaatagactttataaaaagcttgagcct 20452606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 35452087 - 35452034
Alignment:
Q  197 atgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccga 250  Q
    |||| |||||||||||||||||| |||| |||||||||| | ||| ||||||||    
T  35452087 atgagctttttaaaaagtttgagtctaatctatttaataaacgagttaggccga 35452034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 259
Target Start/End: Complemental strand, 23484430 - 23484338
Alignment:
Q  167 tataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactt 259  Q
    ||||||||||||||| || |||||||| || ||  |||||||||||| || || || ||||||||| || | ||| |||||| ||| ||||||    
T  23484430 tataagtcttagtctaacttatttaaactagtggactttttaaaaagcttaaggctgacctatttactaaacgagttaggcctagttggactt 23484338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 9e-39; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 26 - 250
Target Start/End: Original strand, 17314227 - 17314451
Alignment:
Q  26 gctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatatataatta 125  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||  |||||||||||||||||||||||  ||||    
T  17314227 gctagcacatccattttgtagaggttaatactcgtgtattatataatgtattttgtaaaggttgatacatatgtattatataatgtagtatatactatta 17314326  T
Q  126 caaatatacaggtcggcttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatga-cctttttaaaaagtttgagcctaa 224  Q
    || |||||  ||| ||  |  | | || ||||||| |||| ||||||||||||  |||||||||||||| ||| |   ||||||||||| ||||| ||||    
T  17314327 cacatatatgggttggtctaatagact-tagtaggattttctataagtcttagcatgacctatttaaataaataagtttttttaaaaagcttgagtctaa 17314425  T
Q  225 cctatttaatacatgagctaggccga 250  Q
    | ||||||||| | ||||||||||||    
T  17314426 catatttaataaacgagctaggccga 17314451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 29427064 - 29426952
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    |||||||||| |||||| |||| ||||||| |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  29427064 tgtagagctaacacatctattt-gtagaggttaatactcgtgtattataaaatgtattttatagaggctaatacgcgtgtattatataatgtagtatata 29426966  T
Q  120 taattacaaatata 133  Q
    |||||||| |||||    
T  29426965 taattacacatata 29426952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 14265797 - 14265853
Alignment:
Q  177 agtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaa 233  Q
    |||||| ||||||||| ||||||| |||||||||||| ||||| |||||||||||||    
T  14265797 agtctgccctatttaagttaatgagctttttaaaaagcttgagtctaacctatttaa 14265853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 23103098 - 23103165
Alignment:
Q  181 tgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggcc 248  Q
    ||||||||||||||||||    ||||||||||| ||||||||||| |||||| || ||||| ||||||    
T  23103098 tgacctatttaaattaattgattttttaaaaagcttgagcctaacttatttattaaatgagttaggcc 23103165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 133
Target Start/End: Original strand, 14265704 - 14265758
Alignment:
Q  79 tgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    ||||||||||||||| | |||||| | |||||||||||||| ||||| |||||||    
T  14265704 tgtagaggctaatacgcatgtattttgtaatgtagtatataaaattaaaaatata 14265758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 15973838 - 15973883
Alignment:
Q  166 ttataagtcttagtctgacctatttaaattaatgacctttttaaaa 211  Q
    |||||||||||| ||| | |||||||||||||||| ||||||||||    
T  15973838 ttataagtcttaatctaatctatttaaattaatgaactttttaaaa 15973883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 24610606 - 24610651
Alignment:
Q  190 taaattaatgacctttttaaaaagtttgagcctaacctatttaata 235  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||    
T  24610606 taaattaatgaggtttttaaaaagtttgagtgtaacctatttaata 24610651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 4450695 - 4450743
Alignment:
Q  187 atttaaattaatgacctttttaaaaagtttgagcctaacctatttaata 235  Q
    ||||||||||| || ||||||||||||||| ||  ||||||||||||||    
T  4450695 atttaaattaacgaactttttaaaaagttttagtttaacctatttaata 4450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 34032 - 34128
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtat 116  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  34032 tgtagagctaacacatccattttgtagaggctaatacgcgtgtattataacatgtattttatagaggctaatacacgtgtattatataatgtagtat 34128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 154 - 249
Target Start/End: Original strand, 35193 - 35288
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccg 249  Q
    |||||||||||| ||||||  |||| ||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||| |  ||||||||||    
T  35193 tagtaggcttttctataagcattagcctagcctatttaaattaatgagctttttaaaaagcttgagcctaacctatttaataaacaagctaggccg 35288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 5e-31; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 20 - 132
Target Start/End: Original strand, 42280167 - 42280279
Alignment:
Q  20 tgtagagctagcacatcgattttgtagaggctaatactcgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    |||||||||| |||||| |||||||||||| |||||| | ||||||||| |||||||||| |||||  |||||| |||||||||||||||||||||||||    
T  42280167 tgtagagctaacacatccattttgtagaggttaatacgcatgtattataaaatgtattttatagagattaatacgcgtgtattatataatgtagtatata 42280266  T
Q  120 taattacaaatat 132  Q
    |||||||| ||||    
T  42280267 taattacatatat 42280279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 266
Target Start/End: Original strand, 27418709 - 27418818
Alignment:
Q  157 taggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcgga 256  Q
    |||| |||| ||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||| |||| |||| |  || |||| | |||| ||    
T  27418709 taggtttttctataagtcttagtctgacctatttaaattgatgagttttttaagaagtttgagcctaacatattcaataaacaagttaggtcaagtcaga 27418808  T
Q  257 ctttaagtag 266  Q
    ||||||||||    
T  27418809 ctttaagtag 27418818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 267
Target Start/End: Original strand, 42281202 - 42281280
Alignment:
Q  189 ttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtagg 267  Q
    |||||||||||| |||||||||||| ||||| || |||||||||| | ||||| || |||||| |||||||||||||||    
T  42281202 ttaaattaatgaactttttaaaaagcttgagtcttacctatttaacaaatgagttaagccgagccggactttaagtagg 42281280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 251
Target Start/End: Original strand, 13582651 - 13582737
Alignment:
Q  165 tttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgag 251  Q
    |||||||||||||   ||||||| ||||||||||||  ||||   |||||||||||||||||||| ||||| | ||||| |||||||    
T  13582651 tttataagtcttaacttgacctaattaaattaatgagattttgttaaagtttgagcctaacctatataataaacgagctgggccgag 13582737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 133
Target Start/End: Complemental strand, 14266252 - 14266218
Alignment:
Q  99 tattatataatgtagtatatataattacaaatata 133  Q
    ||||||||||||||||||||||||||||| |||||    
T  14266252 tattatataatgtagtatatataattacacatata 14266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 14266198 - 14266141
Alignment:
Q  156 gtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaag 213  Q
    |||||||||| |||||| ||||| |||||||| | | |||||||| ||||||||||||    
T  14266198 gtaggcttttatataagccttagcctgacctagtaatattaatgagctttttaaaaag 14266141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 40084427 - 40084371
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttga 218  Q
    |||| |||||||||||   |||||||||||||||||||  |||| ||||||||||||    
T  40084427 ttttctataagtcttaacttgacctatttaaattaatgtgctttataaaaagtttga 40084371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 96 - 270
Target Start/End: Original strand, 13142794 - 13142967
Alignment:
Q  96 gtgtattatataatgtagtatatataattacaaatatacaggtcggcttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaatt 195  Q
    ||||||| |||| ||||||||||||||||||| |||||   | ||||| | | |  | |||||||||||| |||||| ||||  ||  ||||||||||||    
T  13142794 gtgtattgtatactgtagtatatataattacacatatatgagccggctagatagg-tctagtaggcttttctataagccttaacctagcctatttaaatt 13142892  T
Q  196 aatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    ||||| |||||||||||| ||| ||||||||||||||||| | |||||||| |||||||  ||||||||||||||    
T  13142893 aatgagctttttaaaaagcttgtgcctaacctatttaataaacgagctaggtcgagtcgagctttaagtaggccg 13142967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 268
Target Start/End: Complemental strand, 2753237 - 2753047
Alignment:
Q  76 ttttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatatacaggtcggcttgtt-ggcctatagtaggcttttttataagtc 174  Q
    ||||||||||| |||||||||||||||||||||| || |||||||||||||  |||||  |  |||| || | ||||||  |||| ||||| | ||||      
T  2753237 ttttgtagaggttaatacacgtgtattatataatataatatatataattacgcatatatggaccggcatgatcggccta--gtagacttttctttaagca 2753140  T
Q  175 ttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggc 268  Q
    |||||||||||||||||||||||| | || || |||||||||||||||| ||||||||||| | ||||| | ||||| |  |||||||||||||    
T  2753139 ttagtctgacctatttaaattaataaactatt-aaaaagtttgagcctagcctatttaataaacgagctggaccgagccaaactttaagtaggc 2753047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 31375144 - 31375049
Alignment:
Q  175 ttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagtaggccg 270  Q
    |||| ||| |||||||||| |||||| |||||||||||| |||||| ||||||||||||||   ||||||||||||| || |||||||||||||||    
T  31375144 ttagcctggcctatttaaaataatgagctttttaaaaagcttgagcataacctatttaataaccgagctaggccgagccgaactttaagtaggccg 31375049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 265
Target Start/End: Original strand, 51960329 - 51960420
Alignment:
Q  174 cttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagta 265  Q
    ||||||||| ||||||||||||||||| |||||| ||||||| ||| ||||||||||||||| || || |||| ||||| || |||||||||    
T  51960329 cttagtctgtcctatttaaattaatgatcttttttaaaagttagaggctaacctatttaataaattagataggtcgagttggtctttaagta 51960420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 32018673 - 32018755
Alignment:
Q  154 tagtaggcttttt-tataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaata 235  Q
    |||||| |||||| |||||| ||||| ||||||| |||||||| | || |||||||||| |||||||||||||||||||||||    
T  32018673 tagtagcctttttctataagccttagcctgacctgtttaaattgacgagctttttaaaaggtttgagcctaacctatttaata 32018755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 44836060 - 44836104
Alignment:
Q  183 acctatttaaattaatgacctttttaaaaagtttgagcctaacct 227  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||    
T  44836060 acctatttaaattaatgagctttttaaaaagtttaagcctaacct 44836104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 33710634 - 33710561
Alignment:
Q  59 gtgtattatataatgta-ttttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    ||||||||||||||||| ||||||||||| |||||| ||||| ||||||||||| | ||||||||||||| |||||    
T  33710634 gtgtattatataatgtatttttgtagaggttaatacgcgtgt-ttatataatgt-gcatatataattacacatata 33710561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 42069629 - 42069570
Alignment:
Q  74 tattttgtagaggctaatacacgtgtattatataatgtagtatatataattacaaatata 133  Q
    ||||||||| ||| ||||||   ||||||||||||||||||||||||||||||| |||||    
T  42069629 tattttgtataggttaatacgtttgtattatataatgtagtatatataattacacatata 42069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 2753253 - 2753204
Alignment:
Q  23 agagctagcacatcgattttgtagaggctaatactcgtgtattatataat 72  Q
    ||||||||||||||  ||||||||||| |||||| |||||||||||||||    
T  2753253 agagctagcacatcctttttgtagaggttaatacacgtgtattatataat 2753204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 44327344 - 44327431
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgag 241  Q
    ||||||||||||  |||||| |||  |||||||||||||||||| || |||||||||||  || |  ||||||||||| ||| |||||    
T  44327344 tagtaggcttttcaataagttttaacctgacctatttaaattaaagaactttttaaaaaacttaaatctaacctattttataaatgag 44327431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 25690161 - 25690231
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctattta 232  Q
    |||| ||||| ||||| ||| || ||||| ||||||||| | ||||||||||||||| |||||| ||||||    
T  25690161 ttttctataaatcttaatctaacttattttaattaatgaacattttaaaaagtttgaacctaacatattta 25690231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 265
Target Start/End: Original strand, 9823499 - 9823663
Alignment:
Q  100 attatataatgtagtatatataattacaaatatacaggtcggcttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatg 199  Q
    ||||||||||||||||||||||| |||| |||||  ||||||| || | |  | ||||||| ||||||||||| ||||  || |||||||||||||||||    
T  9823499 attatataatgtagtatatataaatacacatatatgggtcggcctgatagg-tctagtagggttttttataagccttaccctaacctatttaaattaatg 9823597  T
Q  200 acctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagta 265  Q
       ||||||||||| ||||| ||||||||||||||| | || |||| | |||||||||||||||||    
T  9823598 tagtttttaaaaagattgagtctaacctatttaataaacgatctagacggagtcggactttaagta 9823663  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 265
Target Start/End: Original strand, 10725424 - 10725588
Alignment:
Q  100 attatataatgtagtatatataattacaaatatacaggtcggcttgttggcctatagtaggcttttttataagtcttagtctgacctatttaaattaatg 199  Q
    ||||||||||||||||||||||| |||| |||||  ||||||| || | |  | ||||||| ||||||||||| ||||  || |||||||||||||||||    
T  10725424 attatataatgtagtatatataaatacacatatatgggtcggcctgatagg-tctagtagggttttttataagccttaccctaacctatttaaattaatg 10725522  T
Q  200 acctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaagta 265  Q
       ||||||||||| ||||| ||||||||||||||| | || |||| | |||||||||||||||||    
T  10725523 tagtttttaaaaagattgagtctaacctatttaataaacgatctagacggagtcggactttaagta 10725588  T

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Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 266
Target Start/End: Complemental strand, 32521232 - 32521128
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggacttta 261  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||| | ||||||||||||| | ||| |||||||||   |||||||    
T  32521232 ttttttacaagtcttagtctgacctatctaaattaatgagctttttaaaaagtttgagtcaaacctatttaataaaagagataggccgagctagacttta 32521133  T
Q  262 agtag 266  Q
    |||||    
T  32521132 agtag 32521128  T

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Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 31932941 - 31933002
Alignment:
Q  58 cgtgtattatataatgtattttgtagaggctaatacacgtgtattatataatgtagtatata 119  Q
    ||||| |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  31932941 cgtgttttatataatgtattttgtagaggctaatacgcgtctattatataatatagtatata 31933002  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 267
Target Start/End: Original strand, 35224746 - 35224860
Alignment:
Q  154 tagtaggcttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaa-gtttgagcctaacctatttaatacatgagctaggccgagt 252  Q
    |||||| ||||| |||||| ||||  |||||||||||||||||||||  |||| ||||| ||||||||||||||||||||||| | ||| ||||| |||     
T  35224746 tagtagacttttgtataagccttaacctgacctatttaaattaatgagtttttaaaaaaagtttgagcctaacctatttaataaacgagttaggctgagc 35224845  T
Q  253 cggactttaagtagg 267  Q
     |  |||||||||||    
T  35224846 tgagctttaagtagg 35224860  T

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Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Complemental strand, 15962596 - 15962539
Alignment:
Q  175 ttagtctgacctatttaaattaat-gacctttttaaaaagtttgagcctaacctattt 231  Q
    |||||||||||||||||||||||| ||| |||||| |||||||| |||||||||||||    
T  15962596 ttagtctgacctatttaaattaatggacttttttataaagtttgtgcctaacctattt 15962539  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 22807850 - 22807938
Alignment:
Q  161 cttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccg 249  Q
    ||||||| |||| ||||||||||||||||||| | ||||| |||| | ||||| |||||||| |||| |  | || |||||||||||||    
T  22807850 cttttttctaagccttagtctgacctatttaattaaatgagctttattaaaagcttgagcctgacctttacattaaatgagctaggccg 22807938  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 9047356 - 9047428
Alignment:
Q  162 ttttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaata 235  Q
    |||| |||||| ||||||||  |||||||||||||||| | |||||||||| |||||| ||||  |||||||||    
T  9047356 ttttctataagccttagtctcccctatttaaattaatg-cttttttaaaaaatttgagtctaatatatttaata 9047428  T

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Target: scaffold0369 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 266
Target Start/End: Original strand, 10565 - 10667
Alignment:
Q  164 ttttataagtcttagtctgacctatttaaattaatgacctttttaaaaagtttgagcctaacctatttaatacatgagctaggccgagtcggactttaag 263  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |||| ||||||  | ||||| |||| ||  || |||||||||    
T  10565 ttttataagtcttagtctgacttatttaaattaatgagctttttaaaaagtatgagcttaacatatttaccaaatgagttaggacggatcagactttaag 10664  T
Q  264 tag 266  Q
    |||    
T  10665 tag 10667  T

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